disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_R13L1-DRL21 | PF25019 | 44 - 169 | 3.3e-32 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 248 - 384 | 3.1e-07 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 253 - 364 | 2.8e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 349 - 483 | 5.6e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 411 - 491 | 1.5e-08 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 419 - 481 | 7.7e-09 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 90 |
| Acc36I | ACCTGC | 1 cut(s) | 90 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1306 |
| AccBSI | CCGCTC | 1 cut(s) | 463 |
| AccI | GTMKAC | 2 cut(s) | 742, 958 |
| AciI | CCGC | 7 cut(s) | 144, 461, 475, 659, 942, 1015, 1034 |
| AclWI | GGATC | 5 cut(s) | 187, 1044, 1157, 1194, 1432 |
| AcoI | YGGCCR | 1 cut(s) | 1490 |
| AcsI | RAATTY | 6 cut(s) | 7, 50, 223, 368, 383, 1359 |
| AcuI | CTGAAG | 2 cut(s) | 314, 1175 |
| AcyI | GRCGYC | 1 cut(s) | 121 |
| AfaI | GTAC | 2 cut(s) | 560, 766 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 283, 464, 1306 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 676 |
| AhlI | ACTAGT | 2 cut(s) | 169, 767 |
| AjiI | CACGTC | 1 cut(s) | 984 |
| AjnI | CCWGG | 1 cut(s) | 309 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 159, 191 |
| AluBI | AGCT | 8 cut(s) | 139, 354, 566, 1053, 1171, 1234, 1403, 1432 |
| AluI | AGCT | 8 cut(s) | 139, 354, 566, 1053, 1171, 1234, 1403, 1432 |
| Alw21I | GWGCWC | 1 cut(s) | 1173 |
| Alw26I | GTCTC | 5 cut(s) | 192, 847, 990, 1245, 1460 |
| AlwI | GGATC | 5 cut(s) | 187, 1044, 1157, 1194, 1432 |
| AoxI | GGCC | 4 cut(s) | 325, 1226, 1480, 1490 |
| ApeKI | GCWGC | 1 cut(s) | 1117 |
| ApoI | RAATTY | 6 cut(s) | 7, 50, 223, 368, 383, 1359 |
| AseI | ATTAAT | 1 cut(s) | 1211 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 327 |
| AspLEI | GCGC | 1 cut(s) | 1472 |
| AspS9I | GGNCC | 3 cut(s) | 454, 1195, 1481 |
| AsuC2I | CCSGG | 1 cut(s) | 1184 |
| AsuHPI | GGTGA | 2 cut(s) | 71, 642 |
| AvaII | GGWCC | 2 cut(s) | 454, 1195 |
| BalI | TGGCCA | 1 cut(s) | 1492 |
| BanII | GRGCYC | 2 cut(s) | 756, 1173 |
| BbsI | GAAGAC | 2 cut(s) | 600, 764 |
| Bbv12I | GWGCWC | 1 cut(s) | 1173 |
| BbvCI | CCTCAGC | 1 cut(s) | 1248 |
| BbvI | GCAGC | 1 cut(s) | 1104 |
| BccI | CCATC | 2 cut(s) | 1207, 1437 |
| BceAI | ACGGC | 1 cut(s) | 1495 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1153, 1187 |
| BciT130I | CCWGG | 1 cut(s) | 311 |
| BclI | TGATCA | 1 cut(s) | 12 |
| BcnI | CCSGG | 1 cut(s) | 1184 |
| BcoDI | GTCTC | 5 cut(s) | 192, 847, 990, 1245, 1460 |
| BcuI | ACTAGT | 2 cut(s) | 169, 767 |
| BfaI | CTAG | 3 cut(s) | 170, 768, 881 |
| BfmI | CTRYAG | 1 cut(s) | 1433 |
| BfuAI | ACCTGC | 1 cut(s) | 90 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1114 |
| BisI | GCNGC | 2 cut(s) | 1015, 1118 |
| BlsI | GCNGC | 2 cut(s) | 1016, 1119 |
| Bme1390I | CCNGG | 2 cut(s) | 311, 1184 |
| Bme18I | GGWCC | 2 cut(s) | 454, 1195 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 676 |
| BmgBI | CACGTC | 1 cut(s) | 984 |
| BmgT120I | GGNCC | 3 cut(s) | 454, 1195, 1481 |
| BmiI | GGNNCC | 4 cut(s) | 275, 456, 755, 1197 |
| BmrFI | CCNGG | 2 cut(s) | 311, 1184 |
| BmrI | ACTGGG | 1 cut(s) | 888 |
| BmsI | GCATC | 6 cut(s) | 398, 575, 983, 1371, 1393, 1457 |
| BmuI | ACTGGG | 1 cut(s) | 888 |
| BpiI | GAAGAC | 2 cut(s) | 600, 764 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1230, 1248 |
| BpuEI | CTTGAG | 3 cut(s) | 40, 376, 1220 |
| BpuMI | CCSGG | 1 cut(s) | 1184 |
| BsaAI | YACGTR | 1 cut(s) | 1427 |
| BsaHI | GRCGYC | 1 cut(s) | 121 |
| BsaJI | CCNNGG | 3 cut(s) | 1110, 1300, 1473 |
| BsaWI | WCCGGW | 1 cut(s) | 652 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 283, 464, 1306 |
| Bse1I | ACTGG | 3 cut(s) | 894, 993, 1511 |
| Bse3DI | GCAATG | 2 cut(s) | 219, 733 |
| BseBI | CCWGG | 1 cut(s) | 311 |
| BseDI | CCNNGG | 3 cut(s) | 1110, 1300, 1473 |
| BseGI | GGATG | 3 cut(s) | 536, 695, 974 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 283, 464, 1306 |
| BseMI | GCAATG | 2 cut(s) | 219, 733 |
| BseMII | CTCAG | 2 cut(s) | 912, 1262 |
| BseNI | ACTGG | 3 cut(s) | 894, 993, 1511 |
| BseRI | GAGGAG | 2 cut(s) | 286, 464 |
| BseXI | GCAGC | 1 cut(s) | 1104 |
| BseYI | CCCAGC | 1 cut(s) | 139 |
| BsgI | GTGCAG | 2 cut(s) | 964, 1103 |
| Bsh1285I | CGRYCG | 2 cut(s) | 946, 1398 |
| BshFI | GGCC | 4 cut(s) | 327, 1228, 1482, 1492 |
| BsiEI | CGRYCG | 2 cut(s) | 946, 1398 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1173 |
| BsiSI | CCGG | 2 cut(s) | 653, 1184 |
| BslFI | GGGAC | 3 cut(s) | 440, 1181, 1434 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 283, 464, 1306 |
| BsmAI | GTCTC | 5 cut(s) | 192, 847, 990, 1245, 1460 |
| BsmBI | CGTCTC | 3 cut(s) | 847, 990, 1460 |
| BsmFI | GGGAC | 3 cut(s) | 440, 1181, 1434 |
| BsmI | GAATGC | 1 cut(s) | 728 |
| BsnI | GGCC | 4 cut(s) | 327, 1228, 1482, 1492 |
| Bsp1286I | GDGCHC | 2 cut(s) | 756, 1173 |
| Bsp1407I | TGTACA | 1 cut(s) | 558 |
| Bsp143I | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| Bsp19I | CCATGG | 1 cut(s) | 1300 |
| BspACI | CCGC | 7 cut(s) | 144, 461, 475, 659, 942, 1015, 1034 |
| BspANI | GGCC | 4 cut(s) | 327, 1228, 1482, 1492 |
| BspCNI | CTCAG | 2 cut(s) | 913, 1261 |
| BspLI | GGNNCC | 4 cut(s) | 275, 456, 755, 1197 |
| BspMI | ACCTGC | 1 cut(s) | 90 |
| BspPI | GGATC | 5 cut(s) | 187, 1044, 1157, 1194, 1432 |
| BspQI | GCTCTTC | 1 cut(s) | 1320 |
| BsrBI | CCGCTC | 1 cut(s) | 463 |
| BsrDI | GCAATG | 2 cut(s) | 219, 733 |
| BsrGI | TGTACA | 1 cut(s) | 558 |
| BsrI | ACTGG | 3 cut(s) | 894, 993, 1511 |
| BssECI | CCNNGG | 3 cut(s) | 1110, 1300, 1473 |
| BssMI | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| BssNAI | GTATAC | 2 cut(s) | 743, 959 |
| BssNI | GRCGYC | 1 cut(s) | 121 |
| BssT1I | CCWWGG | 3 cut(s) | 1110, 1300, 1473 |
| Bst1107I | GTATAC | 2 cut(s) | 743, 959 |
| Bst2UI | CCWGG | 1 cut(s) | 311 |
| Bst4CI | ACNGT | 4 cut(s) | 555, 602, 689, 1396 |
| Bst6I | CTCTTC | 2 cut(s) | 263, 1320 |
| BstACI | GRCGYC | 1 cut(s) | 121 |
| BstAUI | TGTACA | 1 cut(s) | 558 |
| BstBAI | YACGTR | 1 cut(s) | 1427 |
| BstC8I | GCNNGC | 4 cut(s) | 87, 146, 972, 1055 |
| BstDEI | CTNAG | 4 cut(s) | 857, 921, 1230, 1248 |
| BstDSI | CCRYGG | 1 cut(s) | 1300 |
| BstF5I | GGATG | 3 cut(s) | 536, 695, 974 |
| BstHHI | GCGC | 1 cut(s) | 1472 |
| BstKTI | GATC | 6 cut(s) | 15, 182, 1039, 1152, 1189, 1440 |
| BstMAI | GTCTC | 5 cut(s) | 192, 847, 990, 1245, 1460 |
| BstMBI | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| BstMCI | CGRYCG | 2 cut(s) | 946, 1398 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 145, 386, 1114 |
| BstNI | CCWGG | 1 cut(s) | 311 |
| BstNSI | RCATGY | 1 cut(s) | 29 |
| BstSCI | CCNGG | 2 cut(s) | 309, 1182 |
| BstSFI | CTRYAG | 1 cut(s) | 1433 |
| BstSNI | TACGTA | 1 cut(s) | 1427 |
| BstV1I | GCAGC | 1 cut(s) | 1104 |
| BstV2I | GAAGAC | 2 cut(s) | 600, 764 |
| BstX2I | RGATCY | 2 cut(s) | 1186, 1437 |
| BstYI | RGATCY | 2 cut(s) | 1186, 1437 |
| BstZ17I | GTATAC | 2 cut(s) | 743, 959 |
| BsuRI | GGCC | 4 cut(s) | 327, 1228, 1482, 1492 |
| BtgI | CCRYGG | 1 cut(s) | 1300 |
| BtrI | CACGTC | 1 cut(s) | 984 |
| BtsCI | GGATG | 3 cut(s) | 536, 695, 974 |
| BtsIMutI | CAGTG | 1 cut(s) | 918 |
| BveI | ACCTGC | 1 cut(s) | 90 |
| Cac8I | GCNNGC | 4 cut(s) | 87, 146, 972, 1055 |
| CfoI | GCGC | 1 cut(s) | 1472 |
| Cfr13I | GGNCC | 3 cut(s) | 454, 1195, 1481 |
| CseI | GACGC | 1 cut(s) | 110 |
| Csp6I | GTAC | 2 cut(s) | 559, 765 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 210, 245 |
| CviAII | CATG | 4 cut(s) | 26, 393, 824, 1301 |
| CviQI | GTAC | 2 cut(s) | 559, 765 |
| DdeI | CTNAG | 4 cut(s) | 857, 921, 1230, 1248 |
| DpnI | GATC | 6 cut(s) | 14, 181, 1038, 1151, 1188, 1439 |
| DpnII | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| DraI | TTTAAA | 1 cut(s) | 684 |
| DriI | GACNNNNNGTC | 1 cut(s) | 676 |
| EaeI | YGGCCR | 1 cut(s) | 1490 |
| Eam1104I | CTCTTC | 2 cut(s) | 263, 1320 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 676 |
| EarI | CTCTTC | 2 cut(s) | 263, 1320 |
| EciI | GGCGGA | 2 cut(s) | 674, 1049 |
| Ecl136II | GAGCTC | 1 cut(s) | 1171 |
| Eco105I | TACGTA | 1 cut(s) | 1427 |
| Eco130I | CCWWGG | 3 cut(s) | 1110, 1300, 1473 |
| Eco147I | AGGCCT | 1 cut(s) | 327 |
| Eco24I | GRGCYC | 2 cut(s) | 756, 1173 |
| Eco32I | GATATC | 1 cut(s) | 1026 |
| Eco47I | GGWCC | 2 cut(s) | 454, 1195 |
| Eco53kI | GAGCTC | 1 cut(s) | 1171 |
| Eco57I | CTGAAG | 2 cut(s) | 314, 1175 |
| EcoICRI | GAGCTC | 1 cut(s) | 1171 |
| EcoO109I | RGGNCCY | 2 cut(s) | 454, 1195 |
| EcoRII | CCWGG | 1 cut(s) | 309 |
| EcoRV | GATATC | 1 cut(s) | 1026 |
| EcoT14I | CCWWGG | 3 cut(s) | 1110, 1300, 1473 |
| EcoT22I | ATGCAT | 1 cut(s) | 1386 |
| EcoT38I | GRGCYC | 2 cut(s) | 756, 1173 |
| ErhI | CCWWGG | 3 cut(s) | 1110, 1300, 1473 |
| Esp3I | CGTCTC | 3 cut(s) | 847, 990, 1460 |
| FaeI | CATG | 4 cut(s) | 29, 396, 827, 1304 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 574, 606 |
| FaqI | GGGAC | 3 cut(s) | 440, 1181, 1434 |
| FatI | CATG | 4 cut(s) | 25, 392, 823, 1300 |
| FauI | CCCGC | 1 cut(s) | 137 |
| FbaI | TGATCA | 1 cut(s) | 12 |
| FblI | GTMKAC | 2 cut(s) | 742, 958 |
| Fnu4HI | GCNGC | 2 cut(s) | 1015, 1118 |
| FokI | GGATG | 3 cut(s) | 523, 682, 961 |
| FriOI | GRGCYC | 2 cut(s) | 756, 1173 |
| Fsp4HI | GCNGC | 2 cut(s) | 1015, 1118 |
| FspBI | CTAG | 3 cut(s) | 170, 768, 881 |
| GlaI | GCGC | 1 cut(s) | 1471 |
| GluI | GCNGC | 2 cut(s) | 1015, 1118 |
| GsaI | CCCAGC | 1 cut(s) | 143 |
| HaeIII | GGCC | 4 cut(s) | 327, 1228, 1482, 1492 |
| HapII | CCGG | 2 cut(s) | 653, 1184 |
| HgaI | GACGC | 1 cut(s) | 110 |
| HhaI | GCGC | 1 cut(s) | 1472 |
| Hin1I | GRCGYC | 1 cut(s) | 121 |
| Hin1II | CATG | 4 cut(s) | 29, 396, 827, 1304 |
| Hin6I | GCGC | 1 cut(s) | 1470 |
| HinP1I | GCGC | 1 cut(s) | 1470 |
| HincII | GTYRAC | 1 cut(s) | 414 |
| HindII | GTYRAC | 1 cut(s) | 414 |
| HindIII | AAGCTT | 1 cut(s) | 352 |
| HinfI | GANTC | 6 cut(s) | 76, 407, 421, 732, 1175, 1375 |
| HpaI | GTTAAC | 1 cut(s) | 414 |
| HpaII | CCGG | 2 cut(s) | 653, 1184 |
| HphI | GGTGA | 2 cut(s) | 71, 642 |
| Hpy166II | GTNNAC | 4 cut(s) | 414, 743, 959, 1525 |
| Hpy188I | TCNGA | 6 cut(s) | 63, 467, 1204, 1380, 1442, 1520 |
| Hpy188III | TCNNGA | 8 cut(s) | 305, 320, 548, 631, 790, 848, 881, 1319 |
| Hpy8I | GTNNAC | 4 cut(s) | 414, 743, 959, 1525 |
| HpyAV | CCTTC | 3 cut(s) | 317, 338, 845 |
| HpyCH4III | ACNGT | 4 cut(s) | 555, 602, 689, 1396 |
| HpyCH4IV | ACGT | 3 cut(s) | 94, 983, 1426 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 145, 386, 1114 |
| HpyF3I | CTNAG | 4 cut(s) | 857, 921, 1230, 1248 |
| HpySE526I | ACGT | 3 cut(s) | 94, 983, 1426 |
| Hsp92I | GRCGYC | 1 cut(s) | 121 |
| Hsp92II | CATG | 4 cut(s) | 29, 396, 827, 1304 |
| HspAI | GCGC | 1 cut(s) | 1470 |
| Ksp22I | TGATCA | 1 cut(s) | 12 |
| KspAI | GTTAAC | 1 cut(s) | 414 |
| Kzo9I | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| LguI | GCTCTTC | 1 cut(s) | 1320 |
| LmnI | GCTCC | 3 cut(s) | 273, 759, 1168 |
| Lsp1109I | GCAGC | 1 cut(s) | 1104 |
| LweI | GCATC | 6 cut(s) | 398, 575, 983, 1371, 1393, 1457 |
| MaeI | CTAG | 3 cut(s) | 170, 768, 881 |
| MaeII | ACGT | 3 cut(s) | 94, 983, 1426 |
| MalI | GATC | 6 cut(s) | 14, 181, 1038, 1151, 1188, 1439 |
| MbiI | CCGCTC | 1 cut(s) | 463 |
| MboI | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| MboII | GAAGA | 6 cut(s) | 280, 600, 764, 940, 1181, 1307 |
| MfeI | CAATTG | 3 cut(s) | 71, 129, 433 |
| MflI | RGATCY | 2 cut(s) | 1186, 1437 |
| MhlI | GDGCHC | 2 cut(s) | 756, 1173 |
| MlsI | TGGCCA | 1 cut(s) | 1492 |
| MluNI | TGGCCA | 1 cut(s) | 1492 |
| MlyI | GAGTC | 1 cut(s) | 70 |
| MmeI | TCCRAC | 1 cut(s) | 1335 |
| Mox20I | TGGCCA | 1 cut(s) | 1492 |
| Mph1103I | ATGCAT | 1 cut(s) | 1386 |
| MroXI | GAANNNNTTC | 1 cut(s) | 327 |
| MscI | TGGCCA | 1 cut(s) | 1492 |
| MseI | TTAA | 9 cut(s) | 260, 413, 581, 683, 717, 867, 950, 1211, 1290 |
| Msp20I | TGGCCA | 1 cut(s) | 1492 |
| MspI | CCGG | 2 cut(s) | 653, 1184 |
| MspR9I | CCNGG | 2 cut(s) | 311, 1184 |
| MunI | CAATTG | 3 cut(s) | 71, 129, 433 |
| Mva1269I | GAATGC | 1 cut(s) | 728 |
| MvaI | CCWGG | 1 cut(s) | 311 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 145, 386, 1114 |
| NciI | CCSGG | 1 cut(s) | 1184 |
| NcoI | CCATGG | 1 cut(s) | 1300 |
| NdeII | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| NlaIII | CATG | 4 cut(s) | 29, 396, 827, 1304 |
| NlaIV | GGNNCC | 4 cut(s) | 275, 456, 755, 1197 |
| NsiI | ATGCAT | 1 cut(s) | 1386 |
| NspI | RCATGY | 1 cut(s) | 29 |
| PaqCI | CACCTGC | 1 cut(s) | 90 |
| PceI | AGGCCT | 1 cut(s) | 327 |
| PciSI | GCTCTTC | 1 cut(s) | 1320 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 669 |
| PctI | GAATGC | 1 cut(s) | 728 |
| PdmI | GAANNNNTTC | 1 cut(s) | 327 |
| PfeI | GAWTC | 5 cut(s) | 407, 421, 732, 1175, 1375 |
| PflFI | GACNNNGTC | 1 cut(s) | 814 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1306 |
| PfoI | TCCNGGA | 1 cut(s) | 1182 |
| PkrI | GCNGC | 2 cut(s) | 1016, 1119 |
| PleI | GAGTC | 1 cut(s) | 70 |
| PpsI | GAGTC | 1 cut(s) | 70 |
| Ppu21I | YACGTR | 1 cut(s) | 1427 |
| PpuMI | RGGWCCY | 2 cut(s) | 454, 1195 |
| PshBI | ATTAAT | 1 cut(s) | 1211 |
| Psp124BI | GAGCTC | 1 cut(s) | 1173 |
| Psp5II | RGGWCCY | 2 cut(s) | 454, 1195 |
| Psp6I | CCWGG | 1 cut(s) | 309 |
| PspFI | CCCAGC | 1 cut(s) | 139 |
| PspGI | CCWGG | 1 cut(s) | 309 |
| PspN4I | GGNNCC | 4 cut(s) | 275, 456, 755, 1197 |
| PspPI | GGNCC | 3 cut(s) | 454, 1195, 1481 |
| PspPPI | RGGWCCY | 2 cut(s) | 454, 1195 |
| PsuI | RGATCY | 2 cut(s) | 1186, 1437 |
| PsyI | GACNNNGTC | 1 cut(s) | 814 |
| RsaI | GTAC | 2 cut(s) | 560, 766 |
| RsaNI | GTAC | 2 cut(s) | 559, 765 |
| SacI | GAGCTC | 1 cut(s) | 1173 |
| SapI | GCTCTTC | 1 cut(s) | 1320 |
| SaqAI | TTAA | 9 cut(s) | 260, 413, 581, 683, 717, 867, 950, 1211, 1290 |
| SatI | GCNGC | 2 cut(s) | 1015, 1118 |
| Sau3AI | GATC | 6 cut(s) | 12, 179, 1036, 1149, 1186, 1437 |
| Sau96I | GGNCC | 3 cut(s) | 454, 1195, 1481 |
| SchI | GAGTC | 1 cut(s) | 70 |
| ScrFI | CCNGG | 2 cut(s) | 311, 1184 |
| SduI | GDGCHC | 2 cut(s) | 756, 1173 |
| SfaNI | GCATC | 6 cut(s) | 398, 575, 983, 1371, 1393, 1457 |
| SfcI | CTRYAG | 1 cut(s) | 1433 |
| SinI | GGWCC | 2 cut(s) | 454, 1195 |
| SmlI | CTYRAG | 3 cut(s) | 19, 355, 1235 |
| SmoI | CTYRAG | 3 cut(s) | 19, 355, 1235 |
| SnaBI | TACGTA | 1 cut(s) | 1427 |
| SpeI | ACTAGT | 2 cut(s) | 169, 767 |
| SseBI | AGGCCT | 1 cut(s) | 327 |
| SsiI | CCGC | 7 cut(s) | 144, 461, 475, 659, 942, 1015, 1034 |
| SspI | AATATT | 3 cut(s) | 1103, 1215, 1295 |
| SspMI | CTAG | 3 cut(s) | 170, 768, 881 |
| SstI | GAGCTC | 1 cut(s) | 1173 |
| StuI | AGGCCT | 1 cut(s) | 327 |
| StyD4I | CCNGG | 2 cut(s) | 309, 1182 |
| StyI | CCWWGG | 3 cut(s) | 1110, 1300, 1473 |
| TaaI | ACNGT | 4 cut(s) | 555, 602, 689, 1396 |
| TaiI | ACGT | 3 cut(s) | 97, 986, 1429 |
| TaqI | TCGA | 6 cut(s) | 630, 849, 946, 1005, 1173, 1398 |
| TatI | WGTACW | 2 cut(s) | 558, 764 |
| TauI | GCSGC | 1 cut(s) | 1017 |
| TfiI | GAWTC | 5 cut(s) | 407, 421, 732, 1175, 1375 |
| Tru1I | TTAA | 9 cut(s) | 260, 413, 581, 683, 717, 867, 950, 1211, 1290 |
| Tru9I | TTAA | 9 cut(s) | 260, 413, 581, 683, 717, 867, 950, 1211, 1290 |
| TscAI | CASTG | 1 cut(s) | 925 |
| TseI | GCWGC | 1 cut(s) | 1117 |
| TspDTI | ATGAA | 3 cut(s) | 168, 230, 522 |
| TspGWI | ACGGA | 2 cut(s) | 299, 605 |
| TspRI | CASTG | 1 cut(s) | 925 |
| Tth111I | GACNNNGTC | 1 cut(s) | 814 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1306 |
| VpaK11BI | GGWCC | 2 cut(s) | 454, 1195 |
| VspI | ATTAAT | 1 cut(s) | 1211 |
| XapI | RAATTY | 6 cut(s) | 7, 50, 223, 368, 383, 1359 |
| XbaI | TCTAGA | 1 cut(s) | 880 |
| XceI | RCATGY | 1 cut(s) | 29 |
| XmiI | GTMKAC | 2 cut(s) | 742, 958 |
| XmnI | GAANNNNTTC | 1 cut(s) | 327 |
| XspI | CTAG | 3 cut(s) | 170, 768, 881 |
| Zsp2I | ATGCAT | 1 cut(s) | 1386 |