Rmu_sc0010419.1_g000003

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010419.1
Physical Location & Seq
Forward (+)
13182 .. 20627
7446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010419.1_g000003.1.cds

Sequence Viewer

Length: 4773 bp
atggcagctgaatttctgcttacttttggtgctgaaggtgtgctgaagaaggtgtcctcacttgtcaatgagcaaatcagtcttgcatgggggttcaaagaagatctgaagaagctaggcgagacgttatcactaatccagaacatgttgaatgatgcggcggagaaaccacaagccctggatcgaggcaagacagtggaagggtgggtgaagaaactcaaaggcatagctgatgatgcagacaatgtgctggatgaatgcaactatgaagttctccggcgtaaggttgaactgcataaccacatgaaaaagaaggtactcaactttctttctgcatccaatcccattttatttcgccgtaaaatggcaaataggataaagcatataaatgcatcacttttggatctcaagagtgaggcatcttccattggcttaattgaaaaaagaatagatgcaactgcccatggtgtagggctgggtcgacatccaaccgactcaatgtttgagagggatgaaaaggttattggaaggaaggatgatgtgttaaaaattgttgagagcttgaccaactccgacaatcggcagatcaatctttcagttattgtcattgtgggaatggccggattgggaaagacgactttggctaaatcagtgtacaatgaatctgccatagatacacacttccataaaaaaatatgggtgtgtgtatcgaacacttttgaagtggagacgattttaagtcagatggtagactctgtaataccagaaaaggctgggatgaaaaaccaagatgcattgcttaaagttctgaaagacgagctgaaagagaaaagatatgttctggtgctcgatgatgtttggaatgatgatagtaaaaagtgggaaagcttgatgagttgtttgtcaaagctgaattctaatccgggaagcagcattatcatcaccacacgtattgccaatgtggcatctattcctgaaaaacttcccgggcttgctaaaacacttctcagacttgaactgacaaatttatcaacggaggaatgttggttcattttgaagcaaagagcattgatagatgataatgatttcatcgacgcagatcgagaaaaaattgggaaggcaattgctgcaaagtgtggaggcgtacccttagctgcaaaggttttgggaagcataatgtgctctaaaactagtagagatgaatggttggcaattcaaaatagtgaaatatgggacctgcctgaagaagatgatagaatcatgtcggtattgaagttgagttttaataacttgaagtcatcacctttgaagcaatgttttgcatattgctcaatgttgaagaaagattttgaaattgaaagagaaaatttgatccaactttggatggctcagggattgctccagccttcaactgagaaaaatcatcatgaaatggaggatacaggcaatgaatattttaatattctattgaaaaactccttatttcaagaggtaactggaggtagcactattagcaggtacacaatgcatgatcttgtgcatgatcttgcagaagaagtatccaaaagtgagagcttgacacaagatttgaatgatacatgcgaggttcgacatgttgcacgtattcggccttcaacactagaaaacatgtcagaagtaactgttaggagattgcaatctctattttcgaatgatcaagtctcagatatcattttctccaagttcagagcattgcgcgtcttaaatttacagagggcaaatattcaagagttgccaaattcatttggcaagttgaagcacttgagatatctagacgtctcatattcaagaatcaaagcacttcccaagtcaataggcaagctctataaccttcaaacgttgagaatgcagcaaactgattgtctcagagaggttccaagggaaatgcaaaacttgatcaacttgaggcatctttattttgataagacaatggaatttccagccggattattgcggggattaactaatctccgaacattgtcttactttaatgtgggtagggagatgggtgttggaattgaggaattggttgacttgaaccacttgaaaggtgaattaatcattcgtaatctgcaaaatataagggatgaagaagaagcgaagaaggcaaaattagaggacaagaaaaatgtactggagctaagttatgtatgggcaagaagcagaagcaatccagaaggtttggagagtaggccgagcagcaacattaatgacgagaatgtactagaaggactcaaaccacataccaagttggagagcttgtggattgtaaacttcatgggtgataaatttccttcatggatgatgagaaaccctttgcctctcaacaatttgaagaaggtcctcctttttggctgtcgcagatgcgaagggctcccaatactaggccatctaccgggtcttggacatgtcgagatttctggaatgcataacctaaaacgcttgggaagtgaattttatggttataatcatgtttacgaggctgctgtggctacacgagagagggtcttatttccagcactgaaaacgttaagcattatagggtgcgatgagctaactgaatggatggaagcacccacaacgatgacatcgtcaacaagtaaagtagtggtgttcccttgcttggagaagttgactctcggggattgtcccttattgagaaatgctccaagtcatttcccatctctcaaggagttggagatatgtggcatggacagcgagaagccgatggcaagtatatgcaatgaagtgagcactctgacttctctcaagataagaaacatcaaggggcttacttcgctgtcctcggagatgttgaagaagaacaagaatctcacatctttggagatctggagttgtgatgagatgattcgtattgctccaaatgtatttggctgctgcgcaaatcttagggagctgagcattcagtattgtaagaaactggagcagctagccgagggtctagacacgctccctcttctcgagaagttgacgatagatgattgtcctactctagagttcattccgattgaccacgacatggtatccctccgcgaattgaagattgacgattgtgatggattatctagtattggcctactcgatcactgcacctctctacaggaattgaagatacggcgatgtagaaatctaacatcgattccaatctcacaaggccttgaatctctccgcaaattggatatttacagctgtgatggattatctagtattggcatactcgatcactgcacctctctacaagaattggagataggcagatgtggaaatctaacatccattccaatctcacaaggccttgcatctctccgcaatttggataattacagctgtggtgggttaacgggcctaccgtgcgggattgaaaactgtccctcgcttcagacgttgagggtaagggaatgccccaagctagcatccatttcattttctacggatttgaatccacgactccaggagttgtctttggattgcaatggtctaccaaatcttccagatttccgcagtttcacttccctccgagaattgaatatttacaactgtggtggaataatgggcctaccgagcgggattgaaaactgcacctctcttcagcaattaataatatccggtttctcaagtctagagaccatttcgtttacacgtgtcctcccatctctccgagaattgcaagtttacagctgcgatgaattatcttgcttggctgtcctcgaatactgtccctcgcttcagcaattgagtgtaagcaaatgccccaagcttgcatccatttcattttctacggatttgaatccatgtctgaagaagctgcatgtagatgattgcaatggtctacaatcccttccagatttccacagtttcacatccctccttgtattggagattggaaaatgtgcggggatacaaagtctggtttgtgggtttcatatcccggtgtctctggaggagttgcggatttatcaatgccataacctagagagtattccaagtttagaggaatgcacatccctccgtcggttacaggttcgggattgtgagaaactgaagtctctgtcaacagggctgcgctgcctcgctcgtctggagaatttggatttaggtcctttttgggaggggctcgacttcttccctgattttcaagctccatcacaacaacttgacaggttagagttgagcgggtggcctaaactcatgtctcttcctcaacaagttcaacacttcacttcgttgacagagttgactataagatctttcaatggagtggaggctttaccagagtggttgggcaaccttgcatctctcaaggaactgactatttcgaattgtgagaatctcaagtatctaccttcactcaaagcaatgcaacgcctcaccaaattagaggatctacgaattcgtaggtgtccacttctaaaggaaagatgcaccacggacagcggcgaagaatggcccaagatttctgacattccatcagtcatttgttatgagaatctcaagtatctaccttcactcaaaacaatgcaacgcctcaccaaattagaggttctccgaatttttggctgtccacttctaaaggaaagatgcaggaaggacagcggcgaagaatggcccaaggtttttcacattccaactttccagtgcaaaaagaaattcagttgcttgattgaacccatgcaatgcctcagcaatggctttagtagtaagatgtacaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1590

Amino Acids

179.35

Weight (kDa)

6.33

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2505
AatII GACGTC 1 cut(s) 1818
Acc16I TGCGCA 1 cut(s) 2941
Acc36I ACCTGC 2 cut(s) 1245, 1506
AccB7I CCANNNNNTGG 1 cut(s) 3079
AccBSI CCGCTC 2 cut(s) 3624, 4233
AccI GTMKAC 4 cut(s) 481, 750, 3538, 3889
AccII CGCG 2 cut(s) 1737, 3093
AclI AACGTT 2 cut(s) 1877, 2567
AclWI GGATC 4 cut(s) 189, 411, 1366, 4449
AcoI YGGCCR 1 cut(s) 618
AcuI CTGAAG 9 cut(s) 54, 65, 128, 1263, 3422, 3632, 3770, 3878, 4121
AcvI CACGTG 1 cut(s) 3701
AcyI GRCGYC 1 cut(s) 1815
AfaI GTAC 7 cut(s) 318, 656, 1146, 1520, 2172, 2262, 4766
AflIII ACRYGT 7 cut(s) 144, 947, 1612, 1647, 2446, 3698, 3700
AhlI ACTAGT 1 cut(s) 1190
AjnI CCWGG 2 cut(s) 177, 3510
AjuI GAANNNNNNNTTGG 2 cut(s) 507, 539
AloI GAACNNNNNNTCC 2 cut(s) 1031, 1063
Alw21I GWGCWC 3 cut(s) 849, 1184, 2795
Alw26I GTCTC 9 cut(s) 116, 722, 1705, 1822, 1907, 3677, 3999, 4110, 4257
AlwI GGATC 4 cut(s) 189, 411, 1366, 4449
Ama87I CYCGRG 3 cut(s) 986, 2678, 3020
ArsI GACNNNNNNTTYG 6 cut(s) 485, 517, 1570, 1602, 1885, 1917
AseI ATTAAT 3 cut(s) 2096, 2247, 3656
Asp700I GAANNNNTTC 1 cut(s) 981
AspLEI GCGC 3 cut(s) 1737, 2942, 4125
AspS9I GGNCC 7 cut(s) 1234, 2380, 3403, 3613, 4157, 4506, 4665
AsuC2I CCSGG 5 cut(s) 924, 987, 988, 2436, 3989
AsuHPI GGTGA 7 cut(s) 220, 934, 1293, 2102, 2333, 4420, 4579
AsuII TTCGAA 2 cut(s) 1688, 4376
AsuNHI GCTAGC 2 cut(s) 2989, 3469
AvaI CYCGRG 3 cut(s) 986, 2678, 3020
AvaII GGWCC 3 cut(s) 1234, 2380, 4157
BanII GRGCYC 2 cut(s) 2415, 4176
BarI GAAGNNNNNNTAC 2 cut(s) 1615, 1647
BauI CACGAG 1 cut(s) 2535
BbrPI CACGTG 1 cut(s) 3701
Bbv12I GWGCWC 3 cut(s) 849, 1184, 2795
BbvCI CCTCAGC 1 cut(s) 4739
BceAI ACGGC 2 cut(s) 342, 3191
BciT130I CCWGG 2 cut(s) 179, 3512
BciVI GTATCC 4 cut(s) 1432, 1570, 3094, 3951
BclI TGATCA 2 cut(s) 1693, 1935
BcnI CCSGG 5 cut(s) 924, 987, 988, 2436, 3989
BcoDI GTCTC 9 cut(s) 116, 722, 1705, 1822, 1907, 3677, 3999, 4110, 4257
BcuI ACTAGT 1 cut(s) 1190
BfmI CTRYAG 1 cut(s) 3158
BfuAI ACCTGC 2 cut(s) 1245, 1506
BfuI GTATCC 4 cut(s) 1432, 1570, 3094, 3951
BglI GCCNNNNNGGC 1 cut(s) 962
BglII AGATCT 3 cut(s) 103, 2886, 4304
BlpI GCTNAGC 1 cut(s) 2957
Bme1390I CCNGG 7 cut(s) 179, 924, 987, 988, 2436, 3512, 3989
Bme18I GGWCC 3 cut(s) 1234, 2380, 4157
BmeT110I CYCGRG 3 cut(s) 986, 2678, 3020
BmgT120I GGNCC 7 cut(s) 1234, 2380, 3403, 3613, 4157, 4506, 4665
BmiI GGNNCC 3 cut(s) 1235, 1914, 2414
BmrFI CCNGG 7 cut(s) 179, 924, 987, 988, 2436, 3512, 3989
BmtI GCTAGC 2 cut(s) 2993, 3473
BplI GAGNNNNNCTC 2 cut(s) 2689, 2721
BpmI CTGGAG 8 cut(s) 1385, 1518, 2195, 2911, 3002, 3494, 4019, 4160
Bpu10I CCTNAGC 3 cut(s) 1150, 1389, 4739
Bpu1102I GCTNAGC 1 cut(s) 2957
Bpu14I TTCGAA 2 cut(s) 1688, 4376
BpuEI CTTGAG 9 cut(s) 392, 1822, 1963, 2711, 2792, 3658, 4343, 4376, 4535
BpuMI CCSGG 5 cut(s) 924, 987, 988, 2436, 3989
Bsa29I ATCGAT 1 cut(s) 3197
BsaAI YACGTR 3 cut(s) 950, 1622, 3701
BsaBI GATNNNNATC 4 cut(s) 1675, 3203, 3498, 3846
BsaHI GRCGYC 1 cut(s) 1815
BsaI GGTCTC 1 cut(s) 3677
BsaJI CCNNGG 8 cut(s) 177, 463, 986, 1916, 2844, 2994, 4485, 4668
BsaWI WCCGGW 1 cut(s) 3665
BsaXI ACNNNNNCTCC 4 cut(s) 2285, 2315, 3690, 3720
Bse1I ACTGG 4 cut(s) 1501, 2178, 2985, 4693
Bse8I GATNNNNATC 4 cut(s) 1675, 3203, 3498, 3846
BseBI CCWGG 2 cut(s) 179, 3512
BseCI ATCGAT 1 cut(s) 3197
BseDI CCNNGG 8 cut(s) 177, 463, 986, 1916, 2844, 2994, 4485, 4668
BseJI GATNNNNATC 4 cut(s) 1675, 3203, 3498, 3846
BseMII CTCAG 7 cut(s) 1021, 1403, 1404, 1716, 1918, 2948, 4753
BseNI ACTGG 4 cut(s) 1501, 2178, 2985, 4693
BseRI GAGGAG 1 cut(s) 4016
BseYI CCCAGC 2 cut(s) 475, 773
BsgI GTGCAG 3 cut(s) 3133, 3271, 3622
Bsh1236I CGCG 2 cut(s) 1737, 3093
BshVI ATCGAT 1 cut(s) 3197
BsiHKAI GWGCWC 3 cut(s) 849, 1184, 2795
BsiHKCI CYCGRG 3 cut(s) 986, 2678, 3020
BsiSI CCGG 8 cut(s) 277, 621, 923, 987, 1983, 2435, 3666, 3989
BslFI GGGAC 4 cut(s) 1247, 2673, 3414, 3762
BsmAI GTCTC 9 cut(s) 116, 722, 1705, 1822, 1907, 3677, 3999, 4110, 4257
BsmBI CGTCTC 3 cut(s) 116, 722, 1822
BsmFI GGGAC 4 cut(s) 1247, 2673, 3414, 3762
BsmI GAATGC 6 cut(s) 263, 1890, 2469, 2961, 3464, 4061
Bso31I GGTCTC 1 cut(s) 3677
BsoBI CYCGRG 3 cut(s) 986, 2678, 3020
Bsp119I TTCGAA 2 cut(s) 1688, 4376
Bsp1286I GDGCHC 5 cut(s) 849, 1184, 2415, 2795, 4176
Bsp1407I TGTACA 2 cut(s) 654, 4764
Bsp1720I GCTNAGC 1 cut(s) 2957
Bsp19I CCATGG 1 cut(s) 463
BspCNI CTCAG 7 cut(s) 1020, 1402, 1405, 1715, 1917, 2949, 4752
BspDI ATCGAT 1 cut(s) 3197
BspFNI CGCG 2 cut(s) 1737, 3093
BspHI TCATGA 1 cut(s) 1426
BspLI GGNNCC 3 cut(s) 1235, 1914, 2414
BspMI ACCTGC 2 cut(s) 1245, 1506
BspOI GCTAGC 2 cut(s) 2993, 3473
BspPI GGATC 4 cut(s) 189, 411, 1366, 4449
BspT104I TTCGAA 2 cut(s) 1688, 4376
BspTNI GGTCTC 1 cut(s) 3677
BsrBI CCGCTC 2 cut(s) 3624, 4233
BsrGI TGTACA 2 cut(s) 654, 4764
BsrI ACTGG 4 cut(s) 1501, 2178, 2985, 4693
BssECI CCNNGG 8 cut(s) 177, 463, 986, 1916, 2844, 2994, 4485, 4668
BssNI GRCGYC 1 cut(s) 1815
BssSI CACGAG 1 cut(s) 2535
BssT1I CCWWGG 3 cut(s) 463, 1916, 4668
Bst2BI CACGAG 1 cut(s) 2535
Bst2UI CCWGG 2 cut(s) 179, 3512
Bst4CI ACNGT 7 cut(s) 196, 1663, 3411, 3428, 3599, 3776, 3914
Bst6I CTCTTC 3 cut(s) 3021, 3651, 4260
BstACI GRCGYC 1 cut(s) 1815
BstAPI GCANNNNNTGC 2 cut(s) 1127, 1179
BstAUI TGTACA 2 cut(s) 654, 4764
BstBAI YACGTR 3 cut(s) 950, 1622, 3701
BstBI TTCGAA 2 cut(s) 1688, 4376
BstC8I GCNNGC 5 cut(s) 993, 1859, 2991, 3471, 3819
BstDSI CCRYGG 2 cut(s) 463, 4485
BstFNI CGCG 2 cut(s) 1737, 3093
BstHHI GCGC 3 cut(s) 1737, 2942, 4125
BstMAI GTCTC 9 cut(s) 116, 722, 1705, 1822, 1907, 3677, 3999, 4110, 4257
BstNI CCWGG 2 cut(s) 179, 3512
BstNSI RCATGY 6 cut(s) 148, 1602, 1616, 1651, 2450, 3872
BstSCI CCNGG 7 cut(s) 177, 922, 985, 986, 2434, 3510, 3987
BstSFI CTRYAG 1 cut(s) 3158
BstUI CGCG 2 cut(s) 1737, 3093
BstX2I RGATCY 5 cut(s) 103, 403, 2886, 4304, 4441
BstYI RGATCY 5 cut(s) 103, 403, 2886, 4304, 4441
Bsu15I ATCGAT 1 cut(s) 3197
BsuI GTATCC 4 cut(s) 1432, 1570, 3094, 3951
BsuTUI ATCGAT 1 cut(s) 3197
BtgI CCRYGG 2 cut(s) 463, 4485
BtgZI GCGATG 3 cut(s) 2601, 3193, 3756
BtsI GCAGTG 2 cut(s) 3145, 3283
BtsIMutI CAGTG 6 cut(s) 201, 657, 2558, 3145, 3283, 4700
BveI ACCTGC 2 cut(s) 1245, 1506
Cac8I GCNNGC 5 cut(s) 993, 1859, 2991, 3471, 3819
CciI TCATGA 1 cut(s) 1426
CfoI GCGC 3 cut(s) 1737, 2942, 4125
Cfr13I GGNCC 7 cut(s) 1234, 2380, 3403, 3613, 4157, 4506, 4665
Cfr9I CCCGGG 1 cut(s) 986
ClaI ATCGAT 1 cut(s) 3197
CseI GACGC 2 cut(s) 1103, 1726
Csp6I GTAC 7 cut(s) 317, 655, 1145, 1519, 2171, 2261, 4765
CspCI CAANNNNNGTGG 4 cut(s) 934, 969, 3583, 3618
CviQI GTAC 7 cut(s) 317, 655, 1145, 1519, 2171, 2261, 4765
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 3 cut(s) 3021, 3651, 4260
EarI CTCTTC 3 cut(s) 3021, 3651, 4260
EciI GGCGGA 1 cut(s) 176
Eco130I CCWWGG 3 cut(s) 463, 1916, 4668
Eco147I AGGCCT 2 cut(s) 3216, 3354
Eco24I GRGCYC 2 cut(s) 2415, 4176
Eco31I GGTCTC 1 cut(s) 3677
Eco32I GATATC 2 cut(s) 1708, 1808
Eco47I GGWCC 3 cut(s) 1234, 2380, 4157
Eco57I CTGAAG 9 cut(s) 54, 65, 128, 1263, 3422, 3632, 3770, 3878, 4121
Eco72I CACGTG 1 cut(s) 3701
Eco88I CYCGRG 3 cut(s) 986, 2678, 3020
EcoO109I RGGNCCY 3 cut(s) 1234, 2380, 4157
EcoRI GAATTC 2 cut(s) 913, 4449
EcoRII CCWGG 2 cut(s) 177, 3510
EcoRV GATATC 2 cut(s) 1708, 1808
EcoT14I CCWWGG 3 cut(s) 463, 1916, 4668
EcoT22I ATGCAT 4 cut(s) 394, 796, 1530, 2469
EcoT38I GRGCYC 2 cut(s) 2415, 4176
ErhI CCWWGG 3 cut(s) 463, 1916, 4668
Esp3I CGTCTC 3 cut(s) 116, 722, 1822
FaqI GGGAC 4 cut(s) 1247, 2673, 3414, 3762
FauI CCCGC 5 cut(s) 1986, 3407, 3617, 3946, 4226
FbaI TGATCA 2 cut(s) 1693, 1935
FblI GTMKAC 4 cut(s) 481, 750, 3538, 3889
FriOI GRGCYC 2 cut(s) 2415, 4176
FspI TGCGCA 1 cut(s) 2941
GlaI GCGC 3 cut(s) 1736, 2941, 4124
GsaI CCCAGC 2 cut(s) 479, 777
GsuI CTGGAG 8 cut(s) 1385, 1518, 2195, 2911, 3002, 3494, 4019, 4160
HapII CCGG 8 cut(s) 277, 621, 923, 987, 1983, 2435, 3666, 3989
HgaI GACGC 2 cut(s) 1103, 1726
HhaI GCGC 3 cut(s) 1737, 2942, 4125
Hin1I GRCGYC 1 cut(s) 1815
Hin6I GCGC 3 cut(s) 1735, 2940, 4123
HinP1I GCGC 3 cut(s) 1735, 2940, 4123
HincII GTYRAC 9 cut(s) 482, 2071, 2634, 2673, 3030, 3399, 4113, 4287, 4296
HindII GTYRAC 9 cut(s) 482, 2071, 2634, 2673, 3030, 3399, 4113, 4287, 4296
HindIII AAGCTT 2 cut(s) 886, 3815
HpaI GTTAAC 1 cut(s) 3399
HpaII CCGG 8 cut(s) 277, 621, 923, 987, 1983, 2435, 3666, 3989
HphI GGTGA 7 cut(s) 220, 934, 1293, 2102, 2333, 4420, 4579
Hpy99I CGWCG 2 cut(s) 1097, 4074
HpyCH4III ACNGT 7 cut(s) 196, 1663, 3411, 3428, 3599, 3776, 3914
HpyCH4IV ACGT 8 cut(s) 125, 949, 1621, 1815, 1877, 2567, 3443, 3700
HpySE526I ACGT 8 cut(s) 125, 949, 1621, 1815, 1877, 2567, 3443, 3700
Hsp92I GRCGYC 1 cut(s) 1815
HspAI GCGC 3 cut(s) 1735, 2940, 4123
Ksp22I TGATCA 2 cut(s) 1693, 1935
KspAI GTTAAC 1 cut(s) 3399
LmnI GCTCC 9 cut(s) 1404, 2176, 2418, 2710, 2923, 2953, 2983, 3015, 4204
MaeII ACGT 8 cut(s) 125, 949, 1621, 1815, 1877, 2567, 3443, 3700
MaeIII GTNAC 3 cut(s) 1492, 1657, 4074
MbiI CCGCTC 2 cut(s) 3624, 4233
MfeI CAATTG 3 cut(s) 1122, 3791, 4768
MflI RGATCY 5 cut(s) 103, 403, 2886, 4304, 4441
MhlI GDGCHC 5 cut(s) 849, 1184, 2415, 2795, 4176
MlyI GAGTC 5 cut(s) 488, 746, 2265, 2668, 3501
MmeI TCCRAC 7 cut(s) 512, 597, 1399, 2032, 2271, 2715, 4709
Mph1103I ATGCAT 4 cut(s) 394, 796, 1530, 2469
MroXI GAANNNNTTC 1 cut(s) 981
MslI CAYNNNNRTG 3 cut(s) 387, 2621, 3873
MspA1I CMGCKG 6 cut(s) 8, 3249, 3387, 3738, 4494, 4653
MspI CCGG 8 cut(s) 277, 621, 923, 987, 1983, 2435, 3666, 3989
MspR9I CCNGG 7 cut(s) 179, 924, 987, 988, 2436, 3512, 3989
MunI CAATTG 3 cut(s) 1122, 3791, 4768
Mva1269I GAATGC 6 cut(s) 263, 1890, 2469, 2961, 3464, 4061
MvaI CCWGG 2 cut(s) 179, 3512
MvnI CGCG 2 cut(s) 1737, 3093
NciI CCSGG 5 cut(s) 924, 987, 988, 2436, 3989
NcoI CCATGG 1 cut(s) 463
NheI GCTAGC 2 cut(s) 2989, 3469
NlaIV GGNNCC 3 cut(s) 1235, 1914, 2414
NmeAIII GCCGAG 2 cut(s) 2259, 3019
NsbI TGCGCA 1 cut(s) 2941
NsiI ATGCAT 4 cut(s) 394, 796, 1530, 2469
NspI RCATGY 6 cut(s) 148, 1602, 1616, 1651, 2450, 3872
NspV TTCGAA 2 cut(s) 1688, 4376
PaeR7I CTCGAG 1 cut(s) 3020
PagI TCATGA 1 cut(s) 1426
PceI AGGCCT 2 cut(s) 3216, 3354
PciI ACATGT 4 cut(s) 144, 1612, 1647, 2446
PcsI WCGNNNNNNNCGW 3 cut(s) 2627, 3407, 3440
PctI GAATGC 6 cut(s) 263, 1890, 2469, 2961, 3464, 4061
PdmI GAANNNNTTC 1 cut(s) 981
PflFI GACNNNGTC 1 cut(s) 2629
PflMI CCANNNNNTGG 1 cut(s) 3079
PfoI TCCNGGA 2 cut(s) 922, 3510
PleI GAGTC 5 cut(s) 488, 746, 2265, 2668, 3501
PmaCI CACGTG 1 cut(s) 3701
PmlI CACGTG 1 cut(s) 3701
PpsI GAGTC 5 cut(s) 488, 746, 2265, 2668, 3501
Ppu21I YACGTR 3 cut(s) 950, 1622, 3701
PpuMI RGGWCCY 3 cut(s) 1234, 2380, 4157
PscI ACATGT 4 cut(s) 144, 1612, 1647, 2446
PshBI ATTAAT 3 cut(s) 2096, 2247, 3656
PsiI TTATAA 1 cut(s) 2505
Psp1406I AACGTT 2 cut(s) 1877, 2567
Psp5II RGGWCCY 3 cut(s) 1234, 2380, 4157
Psp6I CCWGG 2 cut(s) 177, 3510
PspCI CACGTG 1 cut(s) 3701
PspFI CCCAGC 2 cut(s) 475, 773
PspGI CCWGG 2 cut(s) 177, 3510
PspN4I GGNNCC 3 cut(s) 1235, 1914, 2414
PspPI GGNCC 7 cut(s) 1234, 2380, 3403, 3613, 4157, 4506, 4665
PspPPI RGGWCCY 3 cut(s) 1234, 2380, 4157
PsuI RGATCY 5 cut(s) 103, 403, 2886, 4304, 4441
PsyI GACNNNGTC 1 cut(s) 2629
PvuII CAGCTG 4 cut(s) 8, 3249, 3387, 3738
RsaI GTAC 7 cut(s) 318, 656, 1146, 1520, 2172, 2262, 4766
RsaNI GTAC 7 cut(s) 317, 655, 1145, 1519, 2171, 2261, 4765
RseI CAYNNNNRTG 3 cut(s) 387, 2621, 3873
SalI GTCGAC 1 cut(s) 480
Sau96I GGNCC 7 cut(s) 1234, 2380, 3403, 3613, 4157, 4506, 4665
SchI GAGTC 5 cut(s) 488, 746, 2265, 2668, 3501
ScrFI CCNGG 7 cut(s) 179, 924, 987, 988, 2436, 3512, 3989
SduI GDGCHC 5 cut(s) 849, 1184, 2415, 2795, 4176
SfcI CTRYAG 1 cut(s) 3158
Sfr274I CTCGAG 1 cut(s) 3020
SfuI TTCGAA 2 cut(s) 1688, 4376
SinI GGWCC 3 cut(s) 1234, 2380, 4157
SlaI CTCGAG 1 cut(s) 3020
SmaI CCCGGG 1 cut(s) 988
SmiMI CAYNNNNRTG 3 cut(s) 387, 2621, 3873
SpeI ACTAGT 1 cut(s) 1190
SseBI AGGCCT 2 cut(s) 3216, 3354
SspI AATATT 4 cut(s) 1454, 1462, 1762, 3589
StuI AGGCCT 2 cut(s) 3216, 3354
StyD4I CCNGG 7 cut(s) 177, 922, 985, 986, 2434, 3510, 3987
StyI CCWWGG 3 cut(s) 463, 1916, 4668
TaaI ACNGT 7 cut(s) 196, 1663, 3411, 3428, 3599, 3776, 3914
TaiI ACGT 8 cut(s) 128, 952, 1624, 1818, 1880, 2570, 3446, 3703
TatI WGTACW 4 cut(s) 654, 2170, 2260, 4764
TauI GCSGC 3 cut(s) 161, 4497, 4656
TscAI CASTG 6 cut(s) 201, 657, 2565, 3152, 3290, 4700
TspGWI ACGGA 5 cut(s) 1049, 3506, 3854, 4058, 4502
TspMI CCCGGG 1 cut(s) 986
TspRI CASTG 6 cut(s) 201, 657, 2565, 3152, 3290, 4700
Tth111I GACNNNGTC 1 cut(s) 2629
Van91I CCANNNNNTGG 1 cut(s) 3079
VpaK11BI GGWCC 3 cut(s) 1234, 2380, 4157
VspI ATTAAT 3 cut(s) 2096, 2247, 3656
XbaI TCTAGA 4 cut(s) 1810, 3001, 3052, 3679
XceI RCATGY 6 cut(s) 148, 1602, 1616, 1651, 2450, 3872
XhoI CTCGAG 1 cut(s) 3020
XmaI CCCGGG 1 cut(s) 986
XmiI GTMKAC 4 cut(s) 481, 750, 3538, 3889
XmnI GAANNNNTTC 1 cut(s) 981
ZraI GACGTC 1 cut(s) 1816
Zsp2I ATGCAT 4 cut(s) 394, 796, 1530, 2469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.