Rmu_sc0016429.1_g000003

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016429.1
Physical Location & Seq
Forward (+)
13673 .. 18225
4553 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016429.1_g000003.1.cds

Sequence Viewer

Length: 3094 bp
atggctgaatttctcacttttggtgctcaagaattgctgaagaaagtggcttcactggccgctcaagagttcgatcttgtatggggattccatggagaaataacaaagctgcgtgactcgctggacatgcttgaggctatgctacgagatgctgaacatccgcgacaagatcacggagaggctgtgaagcgctgggtgaagaagcttgaagacatagctctgtatgccgacgatgtattggatgattatggatatgagcttctccggcgaaaggtgcaattgagaaaccagatgaagaaaaaggtgcaagattttttttccctctccaatcccattatatttcgtcttaaaatggcacataaaattaagaagatcaacacatctttggatgagttgaataagaaggcaagtgctattggcttggttgctagagtatccttagatgcaacaacttcccatgatataagcattgatagaaaaaccaactctctcttaaaagaagatgaaaacaacattattggaagggacgatgttgtggcagatttagttcaagccctgaccaaatcaaaccacaatctggaaagtgatctcccagttttggccattgtgggtatgggagggcttggaaagacaactttggctaaatcaatatatcatgaatctgagataagcacgcactttgagaaaaagatgtggatatgtgtatctacccattttgaagtcgattcaattctgagagggatcctggaatattttaaaccagaaaatgctgcagtgaaagctatagatccaatatgtaatattctccgagaagagttgaaaggaaagagatatcttcttgtacttgatgatgtatggaatgaagatgctgaaaaatggaatgatttgaagaattgtttgctaagaattaccaatgccaaaggaagcagcattgttgtcactactcgcagtgacaaagttgcaaaaatggtggagactcttcgtaggtgtgatttgagaaaactatcagatgatgagtgttggcttatattgaagaataaagcagttccagtcggaagtgttcctatacttaaagatcaagagacaattggaagggagattgccaaaaagtgtggaggtgtaccattagtggcaaagctttattatcttgagacgtttaaaatgccttatcatgttgaagagttcccaaagatgattgctggtatgatcagcttgagacatgtttattttggtaaatatacgaaagttccggttggggtattgggaagattgactaatctcagatcattaccttctctgaaggtgggtaaggagactggacctagaattgaggaactgggtgggttaagccatttgagaggcaccttatctatctataatctggagcatgtaagagatggagaagaagcagtgaatgcaaagttagttgataagaaacatatacgcaagttaactctcgactggaaccttaatagaccaagcaacaatgttgacaatgaggatgtacttgaaggcctgcgaccacattgtaatttggaaattttgaagattcaggggttcatgggtgttaagtttccatcatggtttttggatgccaacaacttgaaagaaattgaattagcagggtgcaacaaatgcgaacgagttccaatactgggccatttgcccaatcttatacatgttaagatgaaggacatgcaaaacctaagatgcttggggtcagagttttatggttacgatcagatttccggtgcaacaacaagtgacgagagaaagactttatttcctgctttgagatcattacgaattgagaatgccaagaatctaatagattggatggaagccggggaagtgatgctgacggcagaaaaattaagggtgtttccttaccttgaggagttgaccctggagcagtgtaggcaattgagaagtgctcctcgtcattttccatctctcaagaagttggtgatacgagtaatggaaagtgttatgcctatagcaagtattttaagcaataaactaactactctcactcatctcgaagtatatgatgtcgaggaacttactagtcttctggaagggacgttaagaaacaacaagaatcttgagtctttgtatataggcgactgttcggaattaagttgcattgccccccatggatttgactgctgcgcatctcttcagaaactggatatttggaagtgtcctaagttgaggtatttatctgatgggctactcccactctctctcaaggagttgtacatagaaaattgctccagtctagagtccattccaatcatccctgagcaaggtggtctcccatctctgcgcgaattgtttatatccgagtgttctcaattatccaatttacctgatgggctacaatattgcacatctcttcaacaattgaaaatatggagctgcccaaagataacgtccattccaattccatctgagggcctcccatcccttggtgtactgcggcttcgtcagtgtcctaaattaacaggcctaccgagtggactaggctgctgcacctctcttgttgatttgtcaatagcagagtgccctaaggtaacatccattccaattggcagtcttagtacaaccctccgaggcttgtcacttccaattttacccgacggcttcacatccctccgtcgattgggaattaagggatgccaaagtacacaaattgatctgcaattttgtgcctttcttcaattttgtgtctctcttgaggagttgacaataatagagtgtcctaatctagagattgttccaagtttagacaagttcacgtccctccgtgagttgtggattactgattgttcccgattgacatgtctacccagtgggttagcaatggcatccccacacgtattcatccgtctcaaggaattgagacttggtccgttttggaatgagctggattcattcccggctcttcaggttctaccacaacttgaatcattgacgatctacgggtggccgaagctcaagtctctgcctcaacaaattcaacacttgacgtctttgacctatttgcagatatatgactttgagggagtggaggctattccagaatggttgg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1031

Amino Acids

116.26

Weight (kDa)

6.55

Isoelectric Point (pI)

49.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 3035
Acc16I TGCGCA 1 cut(s) 2173
AccB1I GGYRCC 1 cut(s) 1361
AccB7I CCANNNNNTGG 2 cut(s) 577, 2471
AccBSI CCGCTC 1 cut(s) 62
AccI GTMKAC 1 cut(s) 2848
AccII CGCG 2 cut(s) 163, 2331
AciI CCGC 3 cut(s) 60, 161, 2482
AclWI GGATC 3 cut(s) 736, 749, 782
AcoI YGGCCR 3 cut(s) 57, 600, 2990
AcsI RAATTY 3 cut(s) 8, 1539, 3018
AcuI CTGAAG 4 cut(s) 59, 1319, 2165, 2933
AcyI GRCGYC 1 cut(s) 3032
AfaI GTAC 7 cut(s) 843, 1122, 1506, 2261, 2478, 2605, 2689
AfeI AGCGCT 1 cut(s) 191
AfiI CCNNNNNNNGG 9 cut(s) 271, 577, 598, 1655, 2309, 2456, 2471, 2665, 2896
AflIII ACRYGT 4 cut(s) 1219, 1678, 2843, 2878
AhlI ACTAGT 1 cut(s) 2066
AjiI CACGTC 1 cut(s) 2802
AjnI CCWGG 2 cut(s) 744, 1905
AjuI GAANNNNNNNTTGG 2 cut(s) 2892, 2924
Alw21I GWGCWC 2 cut(s) 28, 1936
AlwI GGATC 3 cut(s) 736, 749, 782
AlwNI CAGNNNCTG 1 cut(s) 2188
Aor51HI AGCGCT 1 cut(s) 191
AoxI GGCC 7 cut(s) 57, 600, 1513, 1657, 2458, 2509, 2990
ApeKI GCWGC 7 cut(s) 109, 770, 927, 2169, 2421, 2529, 2532
ApoI RAATTY 3 cut(s) 8, 1539, 3018
ArsI GACNNNNNNTTYG 4 cut(s) 2420, 2452, 2987, 3019
Asp700I GAANNNNTTC 1 cut(s) 1644
AspLEI GCGC 3 cut(s) 192, 2174, 2331
AspS9I GGNCC 4 cut(s) 1319, 1657, 2458, 2912
AsuC2I CCSGG 2 cut(s) 1846, 2942
AsuHPI GGTGA 2 cut(s) 208, 1978
AvaII GGWCC 2 cut(s) 1319, 2912
AxyI CCTNAGG 1 cut(s) 2571
BaeGI GKGCMC 1 cut(s) 2570
BalI TGGCCA 1 cut(s) 602
BamHI GGATCC 1 cut(s) 741
BanI GGYRCC 1 cut(s) 1361
BarI GAAGNNNNNNTAC 2 cut(s) 2469, 2501
BbsI GAAGAC 2 cut(s) 216, 2063
Bbv12I GWGCWC 2 cut(s) 28, 1936
BbvI GCAGC 7 cut(s) 96, 757, 939, 2156, 2408, 2516, 2519
BccI CCATC 9 cut(s) 1391, 1585, 1831, 1957, 2222, 2329, 2369, 2458, 2473
BceAI ACGGC 2 cut(s) 1878, 2659
BciT130I CCWGG 2 cut(s) 746, 1907
BciVI GTATCC 1 cut(s) 445
BclI TGATCA 1 cut(s) 1206
BcnI CCSGG 2 cut(s) 1846, 2942
BcuI ACTAGT 1 cut(s) 2066
BfaI CTAG 6 cut(s) 429, 1323, 2067, 2282, 2525, 2771
BfmI CTRYAG 3 cut(s) 771, 783, 1995
BfoI RGCGCY 1 cut(s) 193
BfuI GTATCC 1 cut(s) 445
BisI GCNGC 9 cut(s) 60, 110, 771, 928, 2170, 2422, 2483, 2530, 2533
BlsI GCNGC 9 cut(s) 61, 111, 772, 929, 2171, 2423, 2484, 2531, 2534
Bme1390I CCNGG 4 cut(s) 746, 1846, 1907, 2942
Bme18I GGWCC 2 cut(s) 1319, 2912
BmgBI CACGTC 1 cut(s) 2802
BmgT120I GGNCC 4 cut(s) 1319, 1657, 2458, 2912
BmiI GGNNCC 3 cut(s) 743, 1363, 1466
BmrFI CCNGG 4 cut(s) 746, 1846, 1907, 2942
BmrI ACTGGG 4 cut(s) 587, 1346, 1664, 2847
BmsI GCATC 9 cut(s) 139, 433, 856, 1582, 1700, 1845, 2183, 2669, 2879
BmuI ACTGGG 4 cut(s) 587, 1346, 1664, 2847
BpiI GAAGAC 2 cut(s) 216, 2063
BplI GAGNNNNNCTC 2 cut(s) 1918, 1950
BpmI CTGGAG 3 cut(s) 1403, 1928, 2260
Bpu10I CCTNAGC 1 cut(s) 2304
BpuMI CCSGG 2 cut(s) 1846, 2942
BsaAI YACGTR 1 cut(s) 2881
BsaHI GRCGYC 1 cut(s) 3032
BsaI GGTCTC 1 cut(s) 2321
BsaJI CCNNGG 6 cut(s) 91, 1845, 1905, 2155, 2470, 2614
BsaWI WCCGGW 2 cut(s) 1249, 1748
BsaXI ACNNNNNCTCC 2 cut(s) 168, 198
Bsc4I CCNNNNNNNGG 9 cut(s) 271, 577, 598, 1655, 2309, 2456, 2471, 2665, 2896
Bse21I CCTNAGG 1 cut(s) 2571
Bse3DI GCAATG 2 cut(s) 2145, 2871
BseBI CCWGG 2 cut(s) 746, 1907
BseDI CCNNGG 6 cut(s) 91, 1845, 1905, 2155, 2470, 2614
BseLI CCNNNNNNNGG 9 cut(s) 271, 577, 598, 1655, 2309, 2456, 2471, 2665, 2896
BseMI GCAATG 2 cut(s) 2145, 2871
BseMII CTCAG 5 cut(s) 654, 725, 1294, 2295, 2445
BseRI GAGGAG 3 cut(s) 1910, 1926, 2756
BseSI GKGCMC 1 cut(s) 2570
BseXI GCAGC 7 cut(s) 96, 757, 939, 2156, 2408, 2516, 2519
BseYI CCCAGC 1 cut(s) 192
BsgI GTGCAG 1 cut(s) 2518
Bsh1236I CGCG 2 cut(s) 163, 2331
BshFI GGCC 7 cut(s) 59, 602, 1515, 1659, 2460, 2511, 2992
BshNI GGYRCC 1 cut(s) 1361
BsiHKAI GWGCWC 2 cut(s) 28, 1936
BsiSI CCGG 5 cut(s) 265, 1250, 1749, 1845, 2942
BslFI GGGAC 3 cut(s) 539, 2095, 2788
BslI CCNNNNNNNGG 9 cut(s) 271, 577, 598, 1655, 2309, 2456, 2471, 2665, 2896
BsmBI CGTCTC 2 cut(s) 1145, 2897
BsmFI GGGAC 3 cut(s) 539, 2095, 2788
BsmI GAATGC 2 cut(s) 1420, 1819
BsnI GGCC 7 cut(s) 59, 602, 1515, 1659, 2460, 2511, 2992
Bso31I GGTCTC 1 cut(s) 2321
Bsp1286I GDGCHC 3 cut(s) 28, 1936, 2570
Bsp1407I TGTACA 1 cut(s) 2259
Bsp19I CCATGG 2 cut(s) 91, 2155
BspACI CCGC 3 cut(s) 60, 161, 2482
BspANI GGCC 7 cut(s) 59, 602, 1515, 1659, 2460, 2511, 2992
BspCNI CTCAG 5 cut(s) 655, 726, 1293, 2296, 2446
BspFNI CGCG 2 cut(s) 163, 2331
BspHI TCATGA 1 cut(s) 655
BspLI GGNNCC 3 cut(s) 743, 1363, 1466
BspMAI CTGCAG 1 cut(s) 775
BspPI GGATC 3 cut(s) 736, 749, 782
BspQI GCTCTTC 1 cut(s) 2952
BspT107I GGYRCC 1 cut(s) 1361
BspTNI GGTCTC 1 cut(s) 2321
BsrBI CCGCTC 1 cut(s) 62
BsrDI GCAATG 2 cut(s) 2145, 2871
BsrGI TGTACA 1 cut(s) 2259
BssECI CCNNGG 6 cut(s) 91, 1845, 1905, 2155, 2470, 2614
BssNI GRCGYC 1 cut(s) 3032
BssT1I CCWWGG 3 cut(s) 91, 2155, 2470
Bst2UI CCWGG 2 cut(s) 746, 1907
Bst4CI ACNGT 1 cut(s) 2129
Bst6I CTCTTC 6 cut(s) 807, 984, 1173, 2184, 2403, 2952
BstACI GRCGYC 1 cut(s) 3032
BstAPI GCANNNNNTGC 2 cut(s) 1415, 1635
BstAUI TGTACA 1 cut(s) 2259
BstBAI YACGTR 1 cut(s) 2881
BstC8I GCNNGC 2 cut(s) 674, 1517
BstDSI CCRYGG 2 cut(s) 91, 2155
BstENI CCTNNNNNAGG 1 cut(s) 2307
BstFNI CGCG 2 cut(s) 163, 2331
BstH2I RGCGCY 1 cut(s) 193
BstHHI GCGC 3 cut(s) 192, 2174, 2331
BstNI CCWGG 2 cut(s) 746, 1907
BstNSI RCATGY 6 cut(s) 130, 1223, 1391, 1682, 1699, 2847
BstSCI CCNGG 4 cut(s) 744, 1844, 1905, 2940
BstSFI CTRYAG 3 cut(s) 771, 783, 1995
BstSLI GKGCMC 1 cut(s) 2570
BstUI CGCG 2 cut(s) 163, 2331
BstV1I GCAGC 7 cut(s) 96, 757, 939, 2156, 2408, 2516, 2519
BstV2I GAAGAC 2 cut(s) 216, 2063
BstX2I RGATCY 2 cut(s) 741, 787
BstYI RGATCY 2 cut(s) 741, 787
Bsu36I CCTNAGG 1 cut(s) 2571
BsuI GTATCC 1 cut(s) 445
BsuRI GGCC 7 cut(s) 59, 602, 1515, 1659, 2460, 2511, 2992
BtgI CCRYGG 2 cut(s) 91, 2155
BtrI CACGTC 1 cut(s) 2802
BtsI GCAGTG 4 cut(s) 780, 955, 1416, 1919
BtsIMutI CAGTG 7 cut(s) 53, 780, 955, 1416, 1919, 2498, 2860
Cac8I GCNNGC 2 cut(s) 674, 1517
CaiI CAGNNNCTG 1 cut(s) 2188
CciI TCATGA 1 cut(s) 655
CfoI GCGC 3 cut(s) 192, 2174, 2331
Cfr13I GGNCC 4 cut(s) 1319, 1657, 2458, 2912
Csp6I GTAC 7 cut(s) 842, 1121, 1505, 2260, 2477, 2604, 2688
CspCI CAANNNNNGTGG 4 cut(s) 951, 986, 1093, 1128
CviQI GTAC 7 cut(s) 842, 1121, 1505, 2260, 2477, 2604, 2688
DraI TTTAAA 2 cut(s) 757, 1159
EaeI YGGCCR 3 cut(s) 57, 600, 2990
Eam1104I CTCTTC 6 cut(s) 807, 984, 1173, 2184, 2403, 2952
EarI CTCTTC 6 cut(s) 807, 984, 1173, 2184, 2403, 2952
Eco130I CCWWGG 3 cut(s) 91, 2155, 2470
Eco147I AGGCCT 2 cut(s) 1515, 2511
Eco31I GGTCTC 1 cut(s) 2321
Eco32I GATATC 1 cut(s) 833
Eco47I GGWCC 2 cut(s) 1319, 2912
Eco47III AGCGCT 1 cut(s) 191
Eco57I CTGAAG 4 cut(s) 59, 1319, 2165, 2933
Eco81I CCTNAGG 1 cut(s) 2571
EcoNI CCTNNNNNAGG 1 cut(s) 2307
EcoO109I RGGNCCY 1 cut(s) 2458
EcoRII CCWGG 2 cut(s) 744, 1905
EcoRV GATATC 1 cut(s) 833
EcoT14I CCWWGG 3 cut(s) 91, 2155, 2470
ErhI CCWWGG 3 cut(s) 91, 2155, 2470
Esp3I CGTCTC 2 cut(s) 1145, 2897
FaqI GGGAC 3 cut(s) 539, 2095, 2788
FbaI TGATCA 1 cut(s) 1206
FblI GTMKAC 1 cut(s) 2848
Fnu4HI GCNGC 9 cut(s) 60, 110, 771, 928, 2170, 2422, 2483, 2530, 2533
Fsp4HI GCNGC 9 cut(s) 60, 110, 771, 928, 2170, 2422, 2483, 2530, 2533
FspBI CTAG 6 cut(s) 429, 1323, 2067, 2282, 2525, 2771
FspI TGCGCA 1 cut(s) 2173
GlaI GCGC 3 cut(s) 191, 2173, 2330
GluI GCNGC 9 cut(s) 60, 110, 771, 928, 2170, 2422, 2483, 2530, 2533
GsaI CCCAGC 1 cut(s) 196
GsuI CTGGAG 3 cut(s) 1403, 1928, 2260
HaeII RGCGCY 1 cut(s) 193
HaeIII GGCC 7 cut(s) 59, 602, 1515, 1659, 2460, 2511, 2992
HapII CCGG 5 cut(s) 265, 1250, 1749, 1845, 2942
HhaI GCGC 3 cut(s) 192, 2174, 2331
Hin1I GRCGYC 1 cut(s) 3032
Hin6I GCGC 3 cut(s) 190, 2172, 2329
HinP1I GCGC 3 cut(s) 190, 2172, 2329
HincII GTYRAC 4 cut(s) 1452, 1492, 1902, 2748
HindII GTYRAC 4 cut(s) 1452, 1492, 1902, 2748
HindIII AAGCTT 2 cut(s) 203, 1136
HpaI GTTAAC 1 cut(s) 1452
HpaII CCGG 5 cut(s) 265, 1250, 1749, 1845, 2942
HphI GGTGA 2 cut(s) 208, 1978
Hpy99I CGWCG 3 cut(s) 233, 2645, 2664
HpyAV CCTTC 8 cut(s) 397, 516, 1086, 1294, 1302, 1505, 1684, 2072
HpyCH4III ACNGT 1 cut(s) 2129
HpyCH4IV ACGT 6 cut(s) 1154, 2084, 2435, 2801, 2880, 3032
HpySE526I ACGT 6 cut(s) 1154, 2084, 2435, 2801, 2880, 3032
Hsp92I GRCGYC 1 cut(s) 3032
HspAI GCGC 3 cut(s) 190, 2172, 2329
Ksp22I TGATCA 1 cut(s) 1206
KspAI GTTAAC 1 cut(s) 1452
LguI GCTCTTC 1 cut(s) 2952
LmnI GCTCC 5 cut(s) 1384, 1909, 1939, 2279, 2418
Lsp1109I GCAGC 7 cut(s) 96, 757, 939, 2156, 2408, 2516, 2519
LweI GCATC 9 cut(s) 139, 433, 856, 1582, 1700, 1845, 2183, 2669, 2879
MaeI CTAG 6 cut(s) 429, 1323, 2067, 2282, 2525, 2771
MaeII ACGT 6 cut(s) 1154, 2084, 2435, 2801, 2880, 3032
MaeIII GTNAC 7 cut(s) 113, 937, 950, 1733, 1763, 2575, 2622
MbiI CCGCTC 1 cut(s) 62
MfeI CAATTG 5 cut(s) 278, 1086, 1922, 2405, 2589
MflI RGATCY 2 cut(s) 741, 787
MhlI GDGCHC 3 cut(s) 28, 1936, 2570
MlsI TGGCCA 1 cut(s) 602
MluNI TGGCCA 1 cut(s) 602
MlyI GAGTC 4 cut(s) 110, 970, 2117, 2294
MmeI TCCRAC 1 cut(s) 1033
Mox20I TGGCCA 1 cut(s) 602
MroXI GAANNNNTTC 1 cut(s) 1644
MscI TGGCCA 1 cut(s) 602
Msp20I TGGCCA 1 cut(s) 602
MspI CCGG 5 cut(s) 265, 1250, 1749, 1845, 2942
MspR9I CCNGG 4 cut(s) 746, 1846, 1907, 2942
MunI CAATTG 5 cut(s) 278, 1086, 1922, 2405, 2589
Mva1269I GAATGC 2 cut(s) 1420, 1819
MvaI CCWGG 2 cut(s) 746, 1907
MvnI CGCG 2 cut(s) 163, 2331
NciI CCSGG 2 cut(s) 1846, 2942
NcoI CCATGG 2 cut(s) 91, 2155
NlaIV GGNNCC 3 cut(s) 743, 1363, 1466
NmuCI GTSAC 5 cut(s) 113, 937, 950, 1763, 2622
NsbI TGCGCA 1 cut(s) 2173
NspI RCATGY 6 cut(s) 130, 1223, 1391, 1682, 1699, 2847
PagI TCATGA 1 cut(s) 655
PceI AGGCCT 2 cut(s) 1515, 2511
PciI ACATGT 3 cut(s) 1219, 1678, 2843
PciSI GCTCTTC 1 cut(s) 2952
PctI GAATGC 2 cut(s) 1420, 1819
PdmI GAANNNNTTC 1 cut(s) 1644
PfeI GAWTC 8 cut(s) 87, 659, 725, 1549, 1822, 2101, 2933, 2969
PflFI GACNNNGTC 1 cut(s) 2910
PflMI CCANNNNNTGG 2 cut(s) 577, 2471
PfoI TCCNGGA 1 cut(s) 744
PkrI GCNGC 9 cut(s) 61, 111, 772, 929, 2171, 2423, 2484, 2531, 2534
PleI GAGTC 4 cut(s) 110, 970, 2116, 2293
PpsI GAGTC 4 cut(s) 110, 970, 2116, 2293
Ppu21I YACGTR 1 cut(s) 2881
PscI ACATGT 3 cut(s) 1219, 1678, 2843
Psp6I CCWGG 2 cut(s) 744, 1905
PspFI CCCAGC 1 cut(s) 192
PspGI CCWGG 2 cut(s) 744, 1905
PspN4I GGNNCC 3 cut(s) 743, 1363, 1466
PspPI GGNCC 4 cut(s) 1319, 1657, 2458, 2912
PstI CTGCAG 1 cut(s) 775
PstNI CAGNNNCTG 1 cut(s) 2188
PsuI RGATCY 2 cut(s) 741, 787
PsyI GACNNNGTC 1 cut(s) 2910
RsaI GTAC 7 cut(s) 843, 1122, 1506, 2261, 2478, 2605, 2689
RsaNI GTAC 7 cut(s) 842, 1121, 1505, 2260, 2477, 2604, 2688
SapI GCTCTTC 1 cut(s) 2952
SatI GCNGC 9 cut(s) 60, 110, 771, 928, 2170, 2422, 2483, 2530, 2533
Sau96I GGNCC 4 cut(s) 1319, 1657, 2458, 2912
SchI GAGTC 4 cut(s) 110, 970, 2117, 2294
ScrFI CCNGG 4 cut(s) 746, 1846, 1907, 2942
SduI GDGCHC 3 cut(s) 28, 1936, 2570
SfaNI GCATC 9 cut(s) 139, 433, 856, 1582, 1700, 1845, 2183, 2669, 2879
SfcI CTRYAG 3 cut(s) 771, 783, 1995
SinI GGWCC 2 cut(s) 1319, 2912
SpeI ACTAGT 1 cut(s) 2066
SseBI AGGCCT 2 cut(s) 1515, 2511
SsiI CCGC 3 cut(s) 60, 161, 2482
SspI AATATT 3 cut(s) 752, 802, 2387
SspMI CTAG 6 cut(s) 429, 1323, 2067, 2282, 2525, 2771
StuI AGGCCT 2 cut(s) 1515, 2511
StyD4I CCNGG 4 cut(s) 744, 1844, 1905, 2940
StyI CCWWGG 3 cut(s) 91, 2155, 2470
TaaI ACNGT 1 cut(s) 2129
TaiI ACGT 6 cut(s) 1157, 2087, 2438, 2804, 2883, 3035
TaqI TCGA 6 cut(s) 72, 723, 1458, 2040, 2055, 2662
TatI WGTACW 6 cut(s) 841, 1504, 2259, 2476, 2603, 2687
TauI GCSGC 2 cut(s) 62, 2485
TfiI GAWTC 8 cut(s) 87, 659, 725, 1549, 1822, 2101, 2933, 2969
TscAI CASTG 7 cut(s) 60, 780, 955, 1416, 1919, 2498, 2860
TseFI GTSAC 5 cut(s) 113, 937, 950, 1763, 2622
TseI GCWGC 7 cut(s) 109, 770, 927, 2169, 2421, 2529, 2532
Tsp45I GTSAC 5 cut(s) 113, 937, 950, 1763, 2622
TspDTI ATGAA 8 cut(s) 308, 519, 672, 876, 1549, 1703, 2875, 2925
TspGWI ACGGA 5 cut(s) 189, 2648, 2798, 2879, 2904
TspRI CASTG 7 cut(s) 60, 780, 955, 1416, 1919, 2498, 2860
Tth111I GACNNNGTC 1 cut(s) 2910
Van91I CCANNNNNTGG 2 cut(s) 577, 2471
VpaK11BI GGWCC 2 cut(s) 1319, 2912
XagI CCTNNNNNAGG 1 cut(s) 2307
XapI RAATTY 3 cut(s) 8, 1539, 3018
XbaI TCTAGA 2 cut(s) 2281, 2770
XceI RCATGY 6 cut(s) 130, 1223, 1391, 1682, 1699, 2847
XcmI CCANNNNNNNNNTGG 1 cut(s) 610
XmiI GTMKAC 1 cut(s) 2848
XmnI GAANNNNTTC 1 cut(s) 1644
XspI CTAG 6 cut(s) 429, 1323, 2067, 2282, 2525, 2771
ZraI GACGTC 1 cut(s) 3033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.