Rw4G018450

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
41003035 .. 41004680
1646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G018450.1

Sequence Viewer

Length: 1539 bp
ATGGAAAGCCTCCAGCGGAAGTTGGAACAGAAAAGGTATTTTCTTGTACTTGATGACGTCTGGAATGAGGATGCTAATAAGTGGAATGATTTGAAGAGTTGTTTATTGCAACTAAATTCTGCCAGAGGAAGCTCTGTGATTGTCACCGCTCGTAGATCCAATGTTGCATCAATCATGGAAACACTTCCTAGGTGGAATTTAGAAACTTTATCGGATGATGAATGTTGGTCCATATTGAAGGATAGAGCATTTGTAGATCCTAATGCTCCCATAGCTTCAGAACTAGAGCAAATTGGAAGGGACATTGCCAAAAAGTGTGCTGGTCTTCCACTGGCAGCCAAGGTTTTGGGAAGCTTGATGCGTTCTAAGAACAGTATGAAGGAATGGTTGTCAATTCTAGAAAGTCAAATATGGCAGTTATCATCCGACAATGAGGATAACAGGATCAAGTCGGTTTTGAAGTTGAGTTTTGACAATTTGAAATCACCACTGAAGCAATGTTTTGCATATTGCTCCATCTTCGAGAGAGGTTCCTCAATTGAAAGTGATAGCTTGATCCAACTATGGATGGCTCAAGGTTTTCTCCATCCTTCTTATGGTCACCTAACCAAGCAAGAGATTGAAATGGAGGATATAGGCAATAAGTATTTTGAGACTCTACTAGAGAACTCCTTGTTTCAAGATGCTACAGAGTATGAGGATGACTGTGGTGTTATCATCACCCGATGCAAGATGCATGATCTTGTGCATGATCTTGCAAACGAAGTATCGAAGTGTGATAGCTTGACGCCAGACTTCACTCATGAGAAGGATGATCGTGATATAATTATTCGACGTGTTGCACGGATTCCTACCGCAAGGCTTGAAGAAATGTCAAGAAGAAGTATTTCAAGACTGCAGTCACTCTTTTTTATTGGCCTTGTCTCTAATACCATTTTCCAAAAGCTTACAACTTTACATGTCTTAAGTTTATCTAGTTATGAGATTAAGAAGTTGCCAAATTTACTTGGCAAGCTAAAGCACTTGAGGTATCTAGATCTTTCCGGTACAAAAATTGAAGCACTTCCAAAATCTATTGGCAAGCTCTATAACCTCCAAACATTGAGATTACCGCCGTATCTCATAGAGTGTCCGAAGGAGGTTCAAAATCTGATCAATTTAAGGCATCTTTATTGTGGTCTTGAGAGAATGAAATTTAAGGCTGGGGTTTTGGAGCGGTTAACTAATCTCCGAAGATTGTCTTCCTTTAATGTGGGTGAGGAGAGAGGTCCTGCAATTAAGGAGTTGGGTGGGTTGAACCAATTGAGAGGCCACTTAATTATTGTTGGACTAGAACATGTAAGGGATGGAGAAGAAGCAAAGAAGGCTCGCTTAGTGCAGAAGAGTCACTTAAGCAAGTTGACATTTGGATGGACATACAAATACGATTGGCTACCTAATGAAAAGCAGACGGATGTACTAGATGGCTTGGATCCTCATGGTAACTTGCAAAGCTTGAACATTGAGAATTCATGGGTGCTAGATTTCCGTCATGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

512

Amino Acids

58.76

Weight (kDa)

7.19

Isoelectric Point (pI)

50.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 2 - 84 5e-14 NB-ARC domain
WHD_DRP PF23559 173 - 253 1.3e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 313 - 503 3.4e-22 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 426 - 503 2.1e-18 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 60
AccBSI CCGCTC 2 cut(s) 149, 1216
AciI CCGC 5 cut(s) 16, 147, 855, 1112, 1216
AclWI GGATC 6 cut(s) 150, 251, 452, 550, 1466, 1479
AcsI RAATTY 5 cut(s) 115, 196, 1000, 1193, 1507
AcuI CTGAAG 2 cut(s) 261, 512
AcyI GRCGYC 2 cut(s) 57, 788
AfaI GTAC 3 cut(s) 48, 1048, 1458
AfiI CCNNNNNNNGG 1 cut(s) 596
AflII CTTAAG 2 cut(s) 964, 1390
AflIII ACRYGT 3 cut(s) 835, 958, 1336
AjiI CACGTC 1 cut(s) 836
AluBI AGCT 9 cut(s) 132, 275, 354, 552, 783, 946, 1015, 1084, 1494
AluI AGCT 9 cut(s) 132, 275, 354, 552, 783, 946, 1015, 1084, 1494
Alw26I GTCTC 2 cut(s) 647, 928
AlwI GGATC 6 cut(s) 150, 251, 452, 550, 1466, 1479
AoxI GGCC 2 cut(s) 916, 1309
ApeKI GCWGC 1 cut(s) 335
ApoI RAATTY 5 cut(s) 115, 196, 1000, 1193, 1507
Asp700I GAANNNNTTC 3 cut(s) 183, 886, 1062
AspA2I CCTAGG 1 cut(s) 188
AspS9I GGNCC 2 cut(s) 228, 1268
AsuHPI GGTGA 5 cut(s) 136, 477, 593, 712, 1268
AvaII GGWCC 2 cut(s) 228, 1268
AvrII CCTAGG 1 cut(s) 188
BaeI ACNNNNGTAYC 2 cut(s) 1100, 1133
BamHI GGATCC 1 cut(s) 1471
BbsI GAAGAC 2 cut(s) 317, 1233
BbvI GCAGC 1 cut(s) 347
BccI CCATC 6 cut(s) 524, 562, 594, 1340, 1404, 1457
BceAI ACGGC 1 cut(s) 1099
BclI TGATCA 1 cut(s) 1152
BcoDI GTCTC 2 cut(s) 647, 928
BfaI CTAG 9 cut(s) 189, 284, 398, 662, 975, 1034, 1331, 1460, 1520
BfmI CTRYAG 2 cut(s) 687, 896
BfrI CTTAAG 2 cut(s) 964, 1390
BglII AGATCT 1 cut(s) 1036
BisI GCNGC 1 cut(s) 336
BlnI CCTAGG 1 cut(s) 188
BlsI GCNGC 1 cut(s) 337
Bme18I GGWCC 2 cut(s) 228, 1268
BmgBI CACGTC 1 cut(s) 836
BmgT120I GGNCC 2 cut(s) 228, 1268
BmiI GGNNCC 2 cut(s) 532, 1473
BmsI GCATC 7 cut(s) 61, 176, 348, 673, 716, 723, 1174
BoxI GACNNNNGTC 1 cut(s) 898
BpiI GAAGAC 2 cut(s) 317, 1233
BpuEI CTTGAG 3 cut(s) 558, 1045, 1202
BsaHI GRCGYC 2 cut(s) 57, 788
BsaJI CCNNGG 2 cut(s) 188, 339
BsaWI WCCGGW 1 cut(s) 1043
Bsc4I CCNNNNNNNGG 1 cut(s) 596
Bse1I ACTGG 1 cut(s) 336
Bse3DI GCAATG 2 cut(s) 303, 503
BseDI CCNNGG 2 cut(s) 188, 339
BseLI CCNNNNNNNGG 1 cut(s) 596
BseMI GCAATG 2 cut(s) 303, 503
BseNI ACTGG 1 cut(s) 336
BseRI GAGGAG 1 cut(s) 1274
BseXI GCAGC 1 cut(s) 347
BseYI CCCAGC 1 cut(s) 1202
BsgI GTGCAG 1 cut(s) 1397
BshFI GGCC 2 cut(s) 918, 1311
BsiSI CCGG 1 cut(s) 1044
BslFI GGGAC 1 cut(s) 314
BslI CCNNNNNNNGG 1 cut(s) 596
BsmAI GTCTC 2 cut(s) 647, 928
BsmFI GGGAC 1 cut(s) 314
BsnI GGCC 2 cut(s) 918, 1311
BspACI CCGC 5 cut(s) 16, 147, 855, 1112, 1216
BspANI GGCC 2 cut(s) 918, 1311
BspHI TCATGA 1 cut(s) 802
BspLI GGNNCC 2 cut(s) 532, 1473
BspMAI CTGCAG 1 cut(s) 900
BspPI GGATC 6 cut(s) 150, 251, 452, 550, 1466, 1479
BspTI CTTAAG 2 cut(s) 964, 1390
BsrBI CCGCTC 2 cut(s) 149, 1216
BsrDI GCAATG 2 cut(s) 303, 503
BsrI ACTGG 1 cut(s) 336
BssECI CCNNGG 2 cut(s) 188, 339
BssNI GRCGYC 2 cut(s) 57, 788
BssT1I CCWWGG 2 cut(s) 188, 339
Bst4CI ACNGT 2 cut(s) 374, 707
Bst6I CTCTTC 2 cut(s) 89, 1376
BstACI GRCGYC 2 cut(s) 57, 788
BstAFI CTTAAG 2 cut(s) 964, 1390
BstC8I GCNNGC 3 cut(s) 1013, 1082, 1369
BstDEI CTNAG 2 cut(s) 366, 1372
BstEII GGTNACC 1 cut(s) 599
BstMAI GTCTC 2 cut(s) 647, 928
BstMWI GCNNNNNNNGC 2 cut(s) 272, 1364
BstNSI RCATGY 2 cut(s) 962, 1340
BstPAI GACNNNNGTC 1 cut(s) 898
BstPI GGTNACC 1 cut(s) 599
BstSFI CTRYAG 2 cut(s) 687, 896
BstV1I GCAGC 1 cut(s) 347
BstV2I GAAGAC 2 cut(s) 317, 1233
BstX2I RGATCY 4 cut(s) 155, 256, 1036, 1471
BstXI CCANNNNNNTGG 1 cut(s) 346
BstYI RGATCY 4 cut(s) 155, 256, 1036, 1471
BsuRI GGCC 2 cut(s) 918, 1311
BtrI CACGTC 1 cut(s) 836
BtsIMutI CAGTG 2 cut(s) 329, 488
Cac8I GCNNGC 3 cut(s) 1013, 1082, 1369
CciI TCATGA 1 cut(s) 802
Cfr13I GGNCC 2 cut(s) 228, 1268
CseI GACGC 1 cut(s) 796
Csp6I GTAC 3 cut(s) 47, 1047, 1457
CviAII CATG 9 cut(s) 175, 737, 749, 803, 959, 1337, 1478, 1512, 1532
CviQI GTAC 3 cut(s) 47, 1047, 1457
DdeI CTNAG 2 cut(s) 366, 1372
Eam1104I CTCTTC 2 cut(s) 89, 1376
EarI CTCTTC 2 cut(s) 89, 1376
Eco130I CCWWGG 2 cut(s) 188, 339
Eco47I GGWCC 2 cut(s) 228, 1268
Eco57I CTGAAG 2 cut(s) 261, 512
Eco91I GGTNACC 1 cut(s) 599
EcoO109I RGGNCCY 1 cut(s) 1268
EcoO65I GGTNACC 1 cut(s) 599
EcoRI GAATTC 1 cut(s) 1507
EcoT14I CCWWGG 2 cut(s) 188, 339
EcoT22I ATGCAT 1 cut(s) 738
ErhI CCWWGG 2 cut(s) 188, 339
FaeI CATG 9 cut(s) 178, 740, 752, 806, 962, 1340, 1481, 1515, 1535
FalI AAGNNNNNCTT 6 cut(s) 1225, 1257, 1355, 1387, 1373, 1405
FaqI GGGAC 1 cut(s) 314
FatI CATG 9 cut(s) 174, 736, 748, 802, 958, 1336, 1477, 1511, 1531
FbaI TGATCA 1 cut(s) 1152
Fnu4HI GCNGC 1 cut(s) 336
Fsp4HI GCNGC 1 cut(s) 336
FspBI CTAG 9 cut(s) 189, 284, 398, 662, 975, 1034, 1331, 1460, 1520
GluI GCNGC 1 cut(s) 336
GsaI CCCAGC 1 cut(s) 1206
HaeIII GGCC 2 cut(s) 918, 1311
HapII CCGG 1 cut(s) 1044
HgaI GACGC 1 cut(s) 796
Hin1I GRCGYC 2 cut(s) 57, 788
Hin1II CATG 9 cut(s) 178, 740, 752, 806, 962, 1340, 1481, 1515, 1535
HincII GTYRAC 2 cut(s) 1221, 1401
HindII GTYRAC 2 cut(s) 1221, 1401
HindIII AAGCTT 3 cut(s) 352, 944, 1492
HinfI GANTC 3 cut(s) 655, 847, 1384
HpaI GTTAAC 1 cut(s) 1221
HpaII CCGG 1 cut(s) 1044
HphI GGTGA 5 cut(s) 136, 477, 593, 712, 1268
Hpy166II GTNNAC 2 cut(s) 1221, 1401
Hpy188I TCNGA 6 cut(s) 214, 280, 427, 1134, 1152, 1232
Hpy8I GTNNAC 2 cut(s) 1221, 1401
Hpy99I CGWCG 1 cut(s) 837
HpyAV CCTTC 7 cut(s) 232, 291, 373, 600, 802, 1129, 1357
HpyCH4III ACNGT 2 cut(s) 374, 707
HpyCH4IV ACGT 2 cut(s) 57, 835
HpyF10VI GCNNNNNNNGC 2 cut(s) 272, 1364
HpyF3I CTNAG 2 cut(s) 366, 1372
HpySE526I ACGT 2 cut(s) 57, 835
Hsp92I GRCGYC 2 cut(s) 57, 788
Hsp92II CATG 9 cut(s) 178, 740, 752, 806, 962, 1340, 1481, 1515, 1535
Ksp22I TGATCA 1 cut(s) 1152
KspAI GTTAAC 1 cut(s) 1221
LmnI GCTCC 3 cut(s) 271, 518, 1213
Lsp1109I GCAGC 1 cut(s) 347
LweI GCATC 7 cut(s) 61, 176, 348, 673, 716, 723, 1174
MaeI CTAG 9 cut(s) 189, 284, 398, 662, 975, 1034, 1331, 1460, 1520
MaeII ACGT 2 cut(s) 57, 835
MaeIII GTNAC 5 cut(s) 142, 599, 900, 1385, 1481
MbiI CCGCTC 2 cut(s) 149, 1216
MboII GAAGA 9 cut(s) 106, 317, 511, 878, 891, 1233, 1245, 1364, 1393
MfeI CAATTG 2 cut(s) 537, 1301
MflI RGATCY 4 cut(s) 155, 256, 1036, 1471
MlyI GAGTC 2 cut(s) 649, 1393
MmeI TCCRAC 3 cut(s) 450, 583, 1306
Mph1103I ATGCAT 1 cut(s) 738
MroXI GAANNNNTTC 3 cut(s) 183, 886, 1062
MseI TTAA 9 cut(s) 965, 987, 1160, 1197, 1220, 1248, 1278, 1316, 1391
MslI CAYNNNNRTG 1 cut(s) 1408
MspA1I CMGCKG 1 cut(s) 16
MspCI CTTAAG 2 cut(s) 964, 1390
MspI CCGG 1 cut(s) 1044
MunI CAATTG 2 cut(s) 537, 1301
MwoI GCNNNNNNNGC 2 cut(s) 272, 1364
NlaIII CATG 9 cut(s) 178, 740, 752, 806, 962, 1340, 1481, 1515, 1535
NlaIV GGNNCC 2 cut(s) 532, 1473
NmuCI GTSAC 4 cut(s) 142, 599, 900, 1385
NsiI ATGCAT 1 cut(s) 738
NspI RCATGY 2 cut(s) 962, 1340
PagI TCATGA 1 cut(s) 802
PciI ACATGT 2 cut(s) 958, 1336
PdmI GAANNNNTTC 3 cut(s) 183, 886, 1062
PfeI GAWTC 1 cut(s) 847
PkrI GCNGC 1 cut(s) 337
PleI GAGTC 2 cut(s) 649, 1392
PpsI GAGTC 2 cut(s) 649, 1392
PpuMI RGGWCCY 1 cut(s) 1268
PscI ACATGT 2 cut(s) 958, 1336
PshAI GACNNNNGTC 1 cut(s) 898
Psp5II RGGWCCY 1 cut(s) 1268
PspEI GGTNACC 1 cut(s) 599
PspFI CCCAGC 1 cut(s) 1202
PspN4I GGNNCC 2 cut(s) 532, 1473
PspPI GGNCC 2 cut(s) 228, 1268
PspPPI RGGWCCY 1 cut(s) 1268
PstI CTGCAG 1 cut(s) 900
PsuI RGATCY 4 cut(s) 155, 256, 1036, 1471
RsaI GTAC 3 cut(s) 48, 1048, 1458
RsaNI GTAC 3 cut(s) 47, 1047, 1457
RseI CAYNNNNRTG 1 cut(s) 1408
SaqAI TTAA 9 cut(s) 965, 987, 1160, 1197, 1220, 1248, 1278, 1316, 1391
SatI GCNGC 1 cut(s) 336
Sau96I GGNCC 2 cut(s) 228, 1268
SchI GAGTC 2 cut(s) 649, 1393
SfaNI GCATC 7 cut(s) 61, 176, 348, 673, 716, 723, 1174
SfcI CTRYAG 2 cut(s) 687, 896
SinI GGWCC 2 cut(s) 228, 1268
SmiMI CAYNNNNRTG 1 cut(s) 1408
SmlI CTYRAG 5 cut(s) 573, 964, 1024, 1181, 1390
SmoI CTYRAG 5 cut(s) 573, 964, 1024, 1181, 1390
SsiI CCGC 5 cut(s) 16, 147, 855, 1112, 1216
SspMI CTAG 9 cut(s) 189, 284, 398, 662, 975, 1034, 1331, 1460, 1520
StyI CCWWGG 2 cut(s) 188, 339
TaaI ACNGT 2 cut(s) 374, 707
TaiI ACGT 2 cut(s) 60, 838
TaqI TCGA 3 cut(s) 522, 770, 832
TatI WGTACW 2 cut(s) 46, 1456
TfiI GAWTC 1 cut(s) 847
Tru1I TTAA 9 cut(s) 965, 987, 1160, 1197, 1220, 1248, 1278, 1316, 1391
Tru9I TTAA 9 cut(s) 965, 987, 1160, 1197, 1220, 1248, 1278, 1316, 1391
TscAI CASTG 2 cut(s) 336, 495
TseFI GTSAC 4 cut(s) 142, 599, 900, 1385
TseI GCWGC 1 cut(s) 335
Tsp45I GTSAC 4 cut(s) 142, 599, 900, 1385
TspDTI ATGAA 5 cut(s) 234, 392, 1205, 1455, 1500
TspGWI ACGGA 3 cut(s) 859, 1466, 1517
TspRI CASTG 2 cut(s) 336, 495
Vha464I CTTAAG 2 cut(s) 964, 1390
VpaK11BI GGWCC 2 cut(s) 228, 1268
XapI RAATTY 5 cut(s) 115, 196, 1000, 1193, 1507
XbaI TCTAGA 2 cut(s) 397, 1033
XceI RCATGY 2 cut(s) 962, 1340
XcmI CCANNNNNNNNNTGG 1 cut(s) 593
XmaJI CCTAGG 1 cut(s) 188
XmnI GAANNNNTTC 3 cut(s) 183, 886, 1062
XspI CTAG 9 cut(s) 189, 284, 398, 662, 975, 1034, 1331, 1460, 1520
ZraI GACGTC 1 cut(s) 58
Zsp2I ATGCAT 1 cut(s) 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.