RchiOBHm_Chr4g0414441

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
38930590 .. 38932235
1646 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38485

Sequence Viewer

Length: 1605 bp
ATGATGCGTACTAAAAATAGTAGAGAAGAATGGTTATTAATTCAAAAAAGTCAAATATGGGAATTACCCGAAGGAAATGAAAGAATCATGTCTGTTTTAAAGTTGAGTTTTCAAAATTTGAAATCATCACTTTTGAAACAATGCTTTGCATATTGCTCAATGTTCCCGGAAGATTTCACAATTGAAAGAGAAAAGTTGATCCAACTATGGATGGCTCAGGGATTGCTCCATCCTTCTCCTGGCCAGCATATGGAACAAATGGAGGATATAGGTAATGAGTATTTCAATATTTTATGTCAAAACTCCTTATTCCAAGATGTTACCAAGGATGATGATGGCATTATAGAGGACTGCAAAATGCACGATCTTGTGCATGATCTTGCAAAAGAAGTATCCAAATGTGAGAGTTTGATGCAGGAATTAAAAAATGTGATGGAAGATCACAATACGCTTGAGATTCGACATGTTTCACATGTTCCCATTTTAACACTAGAAAGAATGTCAGAGTCAAGTATGGCAAGATTGCGCTCTCTATTTATGAGTGATGATCAAGTCCCCAGTACCATTTTTCTAAAGTTGAGAGCTTTACGTGTCTTAGATTTAGAAGAGGCGGGTATAGAGGAGTTGCCGAATTCAATTGGCAAGTTGAAGCATTTGAGGTATCTAGACATTTCCTACACAAGAATCCAGGCACTCCCAAAATCTATTGGCAAGCTGTATAACCTTCAAACACTGAGAATGCGTCGTACAGATCTCAAAAAGTTGCCGCAGGAAATGAAAAACTTGATCAACTTGAGACATGTTTATTTTGATGAGGAAATTGAGATTCCAGCTGGTATATTGGGGAAATTGTCCAATCTTAGAACATTACCTTACTTCAGTGTGGGCAAGGAGACAGGACCTGGAATTGGAGAGTTAGGTGGCCTGAAGCAATTGAAAGGCCGACTAACTATTTTGAATCTAGAACATGTGAAGAGTGAAGAAGAAGCGAAGAAGGCAAAATTGGAGGAGAAGAGAGATGTATGCGAGCTAACATTTGAATGGACAAGAGACGACAAAAATGAGGAAGAGTCGGAGAGTAGCACAAGCAGCAGCATTAATGATGAGCATGAACAGGTACTAGAAGGCCTCCGGCCCGATACTAATTTGCAAAGGCTGCAGATTGAAGGATTCAGGGGTGCCAGATTTCCGTCATGGGTGATGTGTCTCAACAACTTGAAGAAGATTAAATTATTCGACTGCCCCAATTGTGAAGGAGTTCCAGCACTGGGTCAGCTACCTAATCTTAGACGTGTCAAGATTTGTAGGATGGATAACCTAAAATGTGTGGGAGCTGATGGTCTAGACTCGTTCCCTCTTGTTGAGCATATGAGTATATTTGGTTGTCCCAGCCTAGAGTCGATTCGGATCACACAGGGCATTGCTTCTCTCCGTGAATTGATCATAAAGGATTGTGATAATCTAACATCACTTCCAACCACACAGGGGGGTATTGCATCTCTAGAGTTGGAGATTAGTAAATGTGATCGATTATCAAGCCTACCAAGTGGTCTCCTCCTACGCTGCACCTCTCTGAAGCTTCGATATGCCATCATCTCTCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

534

Amino Acids

61.05

Weight (kDa)

5.79

Isoelectric Point (pI)

52.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 54 - 128 1.3e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 175 - 464 2.9e-36 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 303 - 437 6e-38 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1178
AccB7I CCANNNNNTGG 1 cut(s) 250
AciI CCGC 2 cut(s) 611, 767
AclWI GGATC 2 cut(s) 193, 1415
AcoI YGGCCR 1 cut(s) 241
AcsI RAATTY 2 cut(s) 115, 631
AcuI CTGAAG 3 cut(s) 862, 947, 1595
AfaI GTAC 4 cut(s) 10, 562, 748, 1119
AfiI CCNNNNNNNGG 5 cut(s) 239, 250, 908, 1268, 1485
AflIII ACRYGT 6 cut(s) 463, 472, 589, 799, 967, 1291
AjiI CACGTC 1 cut(s) 1292
AjnI CCWGG 3 cut(s) 238, 687, 901
AjuI GAANNNNNNNTTGG 2 cut(s) 986, 1018
AluBI AGCT 7 cut(s) 584, 715, 833, 1030, 1276, 1334, 1579
AluI AGCT 7 cut(s) 584, 715, 833, 1030, 1276, 1334, 1579
Alw26I GTCTC 5 cut(s) 790, 887, 1044, 1211, 1556
AlwI GGATC 2 cut(s) 193, 1415
AlwNI CAGNNNCTG 1 cut(s) 902
AoxI GGCC 5 cut(s) 241, 922, 940, 1126, 1133
ApeKI GCWGC 4 cut(s) 1089, 1092, 1156, 1563
ApoI RAATTY 2 cut(s) 115, 631
AseI ATTAAT 2 cut(s) 38, 1098
Asp700I GAANNNNTTC 1 cut(s) 1257
AspLEI GCGC 1 cut(s) 528
AspS9I GGNCC 2 cut(s) 899, 1134
AsuC2I CCSGG 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 1210
AvaII GGWCC 1 cut(s) 899
BalI TGGCCA 1 cut(s) 243
BanI GGYRCC 1 cut(s) 1178
BbvI GCAGC 4 cut(s) 1101, 1104, 1143, 1550
BccI CCATC 7 cut(s) 205, 237, 329, 427, 1303, 1331, 1598
BciT130I CCWGG 3 cut(s) 240, 689, 903
BciVI GTATCC 1 cut(s) 403
BclI TGATCA 3 cut(s) 547, 786, 1440
BcnI CCSGG 1 cut(s) 167
BcoDI GTCTC 5 cut(s) 790, 887, 1044, 1211, 1556
BfaI CTAG 7 cut(s) 491, 665, 962, 1121, 1343, 1394, 1502
BfmI CTRYAG 1 cut(s) 1157
BfuI GTATCC 1 cut(s) 403
BglII AGATCT 1 cut(s) 751
BisI GCNGC 5 cut(s) 767, 1090, 1093, 1157, 1564
BlsI GCNGC 5 cut(s) 768, 1091, 1094, 1158, 1565
Bme1390I CCNGG 4 cut(s) 167, 240, 689, 903
Bme18I GGWCC 1 cut(s) 899
BmgBI CACGTC 1 cut(s) 1292
BmgT120I GGNCC 2 cut(s) 899, 1134
BmiI GGNNCC 1 cut(s) 1180
BmrFI CCNGG 4 cut(s) 167, 240, 689, 903
BmrI ACTGGG 2 cut(s) 552, 1277
BmsI GCATC 2 cut(s) 402, 1505
BmuI ACTGGG 2 cut(s) 552, 1277
Bpu10I CCTNAGC 1 cut(s) 216
BpuEI CTTGAG 2 cut(s) 473, 814
BpuMI CCSGG 1 cut(s) 167
Bsa29I ATCGAT 1 cut(s) 1528
BsaAI YACGTR 1 cut(s) 590
BsaBI GATNNNNATC 1 cut(s) 1406
BsaI GGTCTC 1 cut(s) 1556
BsaJI CCNNGG 1 cut(s) 324
Bsc4I CCNNNNNNNGG 5 cut(s) 239, 250, 908, 1268, 1485
Bse1I ACTGG 2 cut(s) 558, 1272
Bse3DI GCAATG 1 cut(s) 1419
Bse8I GATNNNNATC 1 cut(s) 1406
BseBI CCWGG 3 cut(s) 240, 689, 903
BseCI ATCGAT 1 cut(s) 1528
BseDI CCNNGG 1 cut(s) 324
BseGI GGATG 4 cut(s) 216, 229, 334, 1314
BseJI GATNNNNATC 1 cut(s) 1406
BseLI CCNNNNNNNGG 5 cut(s) 239, 250, 908, 1268, 1485
BseMI GCAATG 1 cut(s) 1419
BseMII CTCAG 2 cut(s) 230, 725
BseNI ACTGG 2 cut(s) 558, 1272
BseRI GAGGAG 3 cut(s) 635, 1022, 1544
BseXI GCAGC 4 cut(s) 1101, 1104, 1143, 1550
BseYI CCCAGC 1 cut(s) 1388
BsgI GTGCAG 1 cut(s) 1549
BshFI GGCC 5 cut(s) 243, 924, 942, 1128, 1135
BshNI GGYRCC 1 cut(s) 1178
BshVI ATCGAT 1 cut(s) 1528
BsiSI CCGG 2 cut(s) 167, 1132
BslFI GGGAC 2 cut(s) 539, 1371
BslI CCNNNNNNNGG 5 cut(s) 239, 250, 908, 1268, 1485
BsmAI GTCTC 5 cut(s) 790, 887, 1044, 1211, 1556
BsmBI CGTCTC 1 cut(s) 1044
BsmFI GGGAC 2 cut(s) 539, 1371
BsmI GAATGC 1 cut(s) 744
BsnI GGCC 5 cut(s) 243, 924, 942, 1128, 1135
Bso31I GGTCTC 1 cut(s) 1556
BspACI CCGC 2 cut(s) 611, 767
BspANI GGCC 5 cut(s) 243, 924, 942, 1128, 1135
BspCNI CTCAG 2 cut(s) 229, 726
BspDI ATCGAT 1 cut(s) 1528
BspLI GGNNCC 1 cut(s) 1180
BspMAI CTGCAG 1 cut(s) 1161
BspPI GGATC 2 cut(s) 193, 1415
BspT107I GGYRCC 1 cut(s) 1178
BspTNI GGTCTC 1 cut(s) 1556
BsrDI GCAATG 1 cut(s) 1419
BsrI ACTGG 2 cut(s) 558, 1272
BssECI CCNNGG 1 cut(s) 324
BssT1I CCWWGG 1 cut(s) 324
Bst2UI CCWGG 3 cut(s) 240, 689, 903
Bst6I CTCTTC 4 cut(s) 600, 968, 1007, 1062
BstAPI GCANNNNNTGC 1 cut(s) 1156
BstBAI YACGTR 1 cut(s) 590
BstC8I GCNNGC 3 cut(s) 245, 713, 1028
BstDEI CTNAG 5 cut(s) 216, 595, 734, 860, 1286
BstF5I GGATG 4 cut(s) 216, 229, 334, 1314
BstHHI GCGC 1 cut(s) 528
BstMAI GTCTC 5 cut(s) 790, 887, 1044, 1211, 1556
BstMWI GCNNNNNNNGC 3 cut(s) 995, 1089, 1156
BstNI CCWGG 3 cut(s) 240, 689, 903
BstNSI RCATGY 4 cut(s) 467, 476, 803, 971
BstSCI CCNGG 4 cut(s) 165, 238, 687, 901
BstSFI CTRYAG 1 cut(s) 1157
BstV1I GCAGC 4 cut(s) 1101, 1104, 1143, 1550
BstX2I RGATCY 1 cut(s) 751
BstYI RGATCY 1 cut(s) 751
Bsu15I ATCGAT 1 cut(s) 1528
BsuI GTATCC 1 cut(s) 403
BsuRI GGCC 5 cut(s) 243, 924, 942, 1128, 1135
BsuTUI ATCGAT 1 cut(s) 1528
BtrI CACGTC 1 cut(s) 1292
BtsCI GGATG 4 cut(s) 216, 229, 334, 1314
BtsIMutI CAGTG 3 cut(s) 731, 886, 1265
Cac8I GCNNGC 3 cut(s) 245, 713, 1028
CaiI CAGNNNCTG 1 cut(s) 902
CfoI GCGC 1 cut(s) 528
Cfr13I GGNCC 2 cut(s) 899, 1134
ClaI ATCGAT 1 cut(s) 1528
CseI GACGC 1 cut(s) 731
Csp6I GTAC 4 cut(s) 9, 561, 747, 1118
CviAII CATG 8 cut(s) 88, 374, 464, 473, 800, 968, 1109, 1194
CviQI GTAC 4 cut(s) 9, 561, 747, 1118
DdeI CTNAG 5 cut(s) 216, 595, 734, 860, 1286
DraI TTTAAA 1 cut(s) 99
EaeI YGGCCR 1 cut(s) 241
Eam1104I CTCTTC 4 cut(s) 600, 968, 1007, 1062
EarI CTCTTC 4 cut(s) 600, 968, 1007, 1062
Eco130I CCWWGG 1 cut(s) 324
Eco147I AGGCCT 1 cut(s) 1128
Eco31I GGTCTC 1 cut(s) 1556
Eco47I GGWCC 1 cut(s) 899
Eco57I CTGAAG 3 cut(s) 862, 947, 1595
EcoO109I RGGNCCY 1 cut(s) 899
EcoRI GAATTC 1 cut(s) 631
EcoRII CCWGG 3 cut(s) 238, 687, 901
EcoT14I CCWWGG 1 cut(s) 324
ErhI CCWWGG 1 cut(s) 324
Esp3I CGTCTC 1 cut(s) 1044
FaeI CATG 8 cut(s) 91, 377, 467, 476, 803, 971, 1112, 1197
FaqI GGGAC 2 cut(s) 539, 1371
FatI CATG 8 cut(s) 87, 373, 463, 472, 799, 967, 1108, 1193
FauI CCCGC 1 cut(s) 604
FauNDI CATATG 2 cut(s) 249, 1368
FbaI TGATCA 3 cut(s) 547, 786, 1440
Fnu4HI GCNGC 5 cut(s) 767, 1090, 1093, 1157, 1564
FokI GGATG 4 cut(s) 216, 223, 341, 1321
Fsp4HI GCNGC 5 cut(s) 767, 1090, 1093, 1157, 1564
FspBI CTAG 7 cut(s) 491, 665, 962, 1121, 1343, 1394, 1502
GlaI GCGC 1 cut(s) 527
GluI GCNGC 5 cut(s) 767, 1090, 1093, 1157, 1564
GsaI CCCAGC 1 cut(s) 1392
HaeIII GGCC 5 cut(s) 243, 924, 942, 1128, 1135
HapII CCGG 2 cut(s) 167, 1132
HgaI GACGC 1 cut(s) 731
HhaI GCGC 1 cut(s) 528
Hin1II CATG 8 cut(s) 91, 377, 467, 476, 803, 971, 1112, 1197
Hin6I GCGC 1 cut(s) 526
HinP1I GCGC 1 cut(s) 526
HindIII AAGCTT 1 cut(s) 1577
HpaII CCGG 2 cut(s) 167, 1132
HphI GGTGA 1 cut(s) 1210
Hpy188I TCNGA 4 cut(s) 505, 1075, 1407, 1575
Hpy188III TCNNGA 5 cut(s) 665, 962, 1297, 1343, 1502
Hpy99I CGWCG 1 cut(s) 747
HpyAV CCTTC 7 cut(s) 65, 243, 734, 988, 1118, 1160, 1247
HpyCH4IV ACGT 2 cut(s) 589, 1291
HpyF10VI GCNNNNNNNGC 3 cut(s) 995, 1089, 1156
HpyF3I CTNAG 5 cut(s) 216, 595, 734, 860, 1286
HpySE526I ACGT 2 cut(s) 589, 1291
Hsp92II CATG 8 cut(s) 91, 377, 467, 476, 803, 971, 1112, 1197
HspAI GCGC 1 cut(s) 526
Ksp22I TGATCA 3 cut(s) 547, 786, 1440
LmnI GCTCC 2 cut(s) 231, 1331
Lsp1109I GCAGC 4 cut(s) 1101, 1104, 1143, 1550
LweI GCATC 2 cut(s) 402, 1505
MaeI CTAG 7 cut(s) 491, 665, 962, 1121, 1343, 1394, 1502
MaeII ACGT 2 cut(s) 589, 1291
MaeIII GTNAC 1 cut(s) 319
MfeI CAATTG 4 cut(s) 180, 636, 932, 1246
MflI RGATCY 1 cut(s) 751
MlsI TGGCCA 1 cut(s) 243
MluNI TGGCCA 1 cut(s) 243
MlyI GAGTC 4 cut(s) 515, 1079, 1340, 1406
MmeI TCCRAC 4 cut(s) 226, 1053, 1488, 1499
Mox20I TGGCCA 1 cut(s) 243
MroXI GAANNNNTTC 1 cut(s) 1257
MscI TGGCCA 1 cut(s) 243
MseI TTAA 6 cut(s) 38, 98, 422, 485, 1098, 1227
MslI CAYNNNNRTG 1 cut(s) 1039
Msp20I TGGCCA 1 cut(s) 243
MspA1I CMGCKG 1 cut(s) 833
MspI CCGG 2 cut(s) 167, 1132
MspR9I CCNGG 4 cut(s) 167, 240, 689, 903
MunI CAATTG 4 cut(s) 180, 636, 932, 1246
Mva1269I GAATGC 1 cut(s) 744
MvaI CCWGG 3 cut(s) 240, 689, 903
MwoI GCNNNNNNNGC 3 cut(s) 995, 1089, 1156
NciI CCSGG 1 cut(s) 167
NdeI CATATG 2 cut(s) 249, 1368
NlaIII CATG 8 cut(s) 91, 377, 467, 476, 803, 971, 1112, 1197
NlaIV GGNNCC 1 cut(s) 1180
NspI RCATGY 4 cut(s) 467, 476, 803, 971
PceI AGGCCT 1 cut(s) 1128
PciI ACATGT 4 cut(s) 463, 472, 799, 967
PctI GAATGC 1 cut(s) 744
PdmI GAANNNNTTC 1 cut(s) 1257
PfeI GAWTC 7 cut(s) 84, 457, 684, 826, 958, 1170, 1402
PflMI CCANNNNNTGG 1 cut(s) 250
PfoI TCCNGGA 1 cut(s) 165
PkrI GCNGC 5 cut(s) 768, 1091, 1094, 1158, 1565
PleI GAGTC 4 cut(s) 514, 1078, 1340, 1405
PpsI GAGTC 4 cut(s) 514, 1078, 1340, 1405
Ppu21I YACGTR 1 cut(s) 590
PpuMI RGGWCCY 1 cut(s) 899
PscI ACATGT 4 cut(s) 463, 472, 799, 967
PshBI ATTAAT 2 cut(s) 38, 1098
Psp5II RGGWCCY 1 cut(s) 899
Psp6I CCWGG 3 cut(s) 238, 687, 901
PspFI CCCAGC 1 cut(s) 1388
PspGI CCWGG 3 cut(s) 238, 687, 901
PspN4I GGNNCC 1 cut(s) 1180
PspPI GGNCC 2 cut(s) 899, 1134
PspPPI RGGWCCY 1 cut(s) 899
PstI CTGCAG 1 cut(s) 1161
PstNI CAGNNNCTG 1 cut(s) 902
PsuI RGATCY 1 cut(s) 751
PvuII CAGCTG 1 cut(s) 833
RsaI GTAC 4 cut(s) 10, 562, 748, 1119
RsaNI GTAC 4 cut(s) 9, 561, 747, 1118
RseI CAYNNNNRTG 1 cut(s) 1039
SaqAI TTAA 6 cut(s) 38, 98, 422, 485, 1098, 1227
SatI GCNGC 5 cut(s) 767, 1090, 1093, 1157, 1564
Sau96I GGNCC 2 cut(s) 899, 1134
SchI GAGTC 4 cut(s) 515, 1079, 1340, 1406
ScrFI CCNGG 4 cut(s) 167, 240, 689, 903
SfaNI GCATC 2 cut(s) 402, 1505
SfcI CTRYAG 1 cut(s) 1157
SinI GGWCC 1 cut(s) 899
SmiMI CAYNNNNRTG 1 cut(s) 1039
SmlI CTYRAG 2 cut(s) 452, 793
SmoI CTYRAG 2 cut(s) 452, 793
SseBI AGGCCT 1 cut(s) 1128
SsiI CCGC 2 cut(s) 611, 767
SspI AATATT 1 cut(s) 289
SspMI CTAG 7 cut(s) 491, 665, 962, 1121, 1343, 1394, 1502
StuI AGGCCT 1 cut(s) 1128
StyD4I CCNGG 4 cut(s) 165, 238, 687, 901
StyI CCWWGG 1 cut(s) 324
TaiI ACGT 2 cut(s) 592, 1294
TaqI TCGA 5 cut(s) 460, 1236, 1400, 1528, 1582
TauI GCSGC 1 cut(s) 769
TfiI GAWTC 7 cut(s) 84, 457, 684, 826, 958, 1170, 1402
Tru1I TTAA 6 cut(s) 38, 98, 422, 485, 1098, 1227
Tru9I TTAA 6 cut(s) 38, 98, 422, 485, 1098, 1227
TscAI CASTG 3 cut(s) 738, 886, 1272
TseI GCWGC 4 cut(s) 1089, 1092, 1156, 1563
TspDTI ATGAA 3 cut(s) 93, 791, 1125
TspGWI ACGGA 3 cut(s) 1179, 1421, 1590
TspRI CASTG 3 cut(s) 738, 886, 1272
Van91I CCANNNNNTGG 1 cut(s) 250
VpaK11BI GGWCC 1 cut(s) 899
VspI ATTAAT 2 cut(s) 38, 1098
XapI RAATTY 2 cut(s) 115, 631
XbaI TCTAGA 4 cut(s) 664, 961, 1342, 1501
XceI RCATGY 4 cut(s) 467, 476, 803, 971
XcmI CCANNNNNNNNNTGG 1 cut(s) 236
XmnI GAANNNNTTC 1 cut(s) 1257
XspI CTAG 7 cut(s) 491, 665, 962, 1121, 1343, 1394, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.