MD02G1075200.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
5989737 .. 5995852
6116 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1075200.v1.1.491

Sequence Viewer

Length: 2994 bp
ATGGAAGCAGCTTTATGCTTATGTGAAGTGCAATTAATTGTAAGGGGAAGCAAAGCATCAGCATCTCCCTTCGCAGAAAGAACAAGTAATGGTAATGGATCTTTTGTCCTGTCTTATTATTCACTGTTTCATGAACTATATACATTGTCATTTCATTTGTCAAGACCTTTCATTCATCAGCTTCCAACACTCTACACCTCCACCCTTCTTGTGTCCTTCAGCTATTTCTCTATTCTCTGCTCTCCTCTGATCTCCGTCGTCCCTCGCGCGAGTATGGATTCTGCAAAGGTGTTAGAAACTCTCTATACTTTTCCGGTGGAGGGAATACTAAATTCGGTCACTTCACTTGCTGCTCAAGAAATCAGTCTTTTCCGAGGATTCAAAAAAGAGCTAGCTAAGCTTCGTCAATCGGTACTTGCAATTCAAGGGTTCTTAGGCGATGTTTCGTACCAACCACGGAACAGGGGCAAGGCGGTGGAGGACTGGGTGAAGAAACTGAAAGACGTAGCTCATGATGCTGATGATGTATTGGAGGACATCAACTACGAAGTTCTCAGGCGTAAAGTAGAAATTCAAAACCACATGAAGAAGAAGGTACTTAACTTCTTTTCGCTCTCCAACCCCATTTTATTTCGTCAAAAGATGGCCCACAAGATTAAGAACATCAATGCGTCACTGGCGGCTCTCAAAGGGGATGCAGCTTTCATCGGCTTAGTTGCAAGGAGAGTAGATCAAACCCCTCCAGGTATGGGGAACAGAGAAACTGTCTCAAGCTTCGGTCACGATGAGAAGATCATTGGAAGGGAGAAGATTGTGTCGGATATCATTGCAACCTTGATCGAGTCCAAGAATCAGGAAGAGTACCTTTCAGTTAAGGCCATTGTGGGAATGGGAGGACTCGGAAAGACGACTTTGGCAAGATCAATATTCAATGACGATGCTATTGGTAGACATTTTGTTGAAAAGATGTGGGTGTGTGTATCCGACACTTTTGAGGTTAATTCGATTCTAAATCGGATGTTAGAATCCCTTAACTCAAACAGGACAGGAGTTACAAGTCGGGAAGCATTGCTGAATGACCTCAAACAAAGGTTGACAGGGAAGAGGTATATTCTAATACTCGATGACGTTTGGAACGAAGATGACAACTTATGGAGTGATTTTACGAGTTGTTTGTCGAGACTCAATTCTGCTCCTGGAAGCGTTGCCATTGTTACTACCCGTAGTGCTAAGGTTGCATCAATCACAGAGACAATGCCAAGGTGTGATTTGGCGAGCCTATCAGTAGATGATTGTTGGTCCATATTAAAGAGTGAAGCATTCCCAAATGGTGCTCCTCCTTTAGATCCAAAACAAGTGGACATTGGAAGGGCCATAGCTGCAAAGTGTGTTGGCGTACCATTAGTGGCAAAGGTATTAGGAAGCCTGATGCGTTCCAAACATAGTACAAGTGAATGGTCATCGATTCTGGAAAGTGAGATATGGCAATTACCAAAAACAGAGGATAAAATCATGTTGGTTTTGAAGTTAAGTTTTGATAATTTGAAGTCTCCATCCTTGAAACAATGTTTTGCATATTGTTCAATTTTCAAAAAAGATTTTGAAATTGAACAGGATGACTTGGTCCAGCTCTGGATGGCTCAAGGATATCTCCATTTTTCTCCCAACATGAGTATGGAGGACATAGGCAATGAATATTTTAATACTCTATTGCAAAACTCCTTATTTCAAGATGCTAGTGAAGATAAGTACGGCATTATTACGGAGTGCAAGATGCATGATCTTGTGCATGATCTTGCAGAGGAAGTATTCAAATTTGAAAGCATGACGCGAGACACTGATCAGATGGATGATGATGCACGCAAGATTCAGCATGTTGCACATATTTCTTCCACGACACTTGAAAGAATTACACAAGGGAGTATTAGGAGATTGCAGTCGCTATTTGTTGATTGCGAGGTCCCTAGTAACATCTTTGAAAGGTTTAGAGGTTTACGAATGTTGAATTTATCCAAGACTGGAATTGAGGAGTTGCCAAGTTCAATTGGAAAGTTGAAACGCTTGAGGTATCTCAACATTTCCTTGACAAGAATAAAAGAACTCCCCAAATCTATTGGCAAGCTCTATAATCTTCAGACGTTAAGAATGTCATATACAGACATTGAAACGTTTCCTAAGGAAATGGAAAATTTGATCAACTTGAGACATGTTTATTTTGATAAGGATAAGGAAGTTCCATTTGGGATGACAAGATTGACTCATCTGCAAACGCTACCTTCCTTTATTTTGGATGAGGATGGGCGTCATAGACTTGATGAGCTGGGTGAGCTAAATGAATTGAAAGGGAAACTAGTTATTGGATCATTGGAACATGTGAGAGACAAGGAAGAAGCAGCAAAATCAAATTTAGTAAGGAAAGCAAACATACGAAAATTGAAATTAAAATGGGGGTGTGACCATTCTGCGGATCTTGACGAGGATATTCTTGAAGGGCTCCAACCGCACCCCAACTTAGAAAGCTTGACGATTGAGGAATTCAAGGGTACTAAATTTGCATCTTGGATGATGAGAAATTGTCGAGTAACCAATCTTCGTCAATTGAGAATTAGGAGCTGTGAGAAATTGTTGAGCTTGTGTTGTGGGTTAGAATATTGCCCATCACTTGAGACGGTGGAAATTGAGGATTGCGACCATTTAGAATCCTTCCAAATTTCACCATCCCAATCTCTTCAGGAGTTGAAAATAGTTGGTTGCCCAAAGCTAAGATGCACTTCAATTCACAGTCTGCCCTCACTCCGCAAATTGGTTATTGAAAAATGTACGTCTCTTGAGGAGTCGGAAAATATACAACAACAGCAGCAGGTGGAGGACTTGTCTTTAAACGGTTGCACATCCCTCCGTAAATTGAGAATTAAAGATTGCAATGGATTCACAAGTATACTTAGTGGGCTCCATTCTTGTACTAATCTTCGCGAAGTGCTATTCCCAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

998

Amino Acids

112.82

Weight (kDa)

6.49

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 108 - 194 3.1e-19 Rx N-terminal domain
NB-ARC PF00931 269 - 443 1.6e-34 NB-ARC domain
WHD_DRP PF23559 529 - 600 1.3e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 658 - 976 4.5e-31 Leucine-rich repeat region
LRR_8 PF13855 663 - 721 7.6e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 771 - 896 3.7e-32 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2851
Acc36I ACCTGC 1 cut(s) 2851
AccI GTMKAC 2 cut(s) 949, 2938
AccII CGCG 4 cut(s) 267, 269, 1831, 2973
AciI CCGC 5 cut(s) 473, 680, 2465, 2501, 2797
AclI AACGTT 1 cut(s) 2168
AclWI GGATC 4 cut(s) 106, 1340, 2368, 2475
AcsI RAATTY 9 cut(s) 331, 570, 1814, 2005, 2188, 2404, 2534, 2549, 2709
AcuI CTGAAG 3 cut(s) 202, 2117, 2714
AcyI GRCGYC 1 cut(s) 2302
AfiI CCNNNNNNNGG 4 cut(s) 320, 749, 2464, 2803
AflIII ACRYGT 2 cut(s) 2206, 2371
AhlI ACTAGT 1 cut(s) 2350
AjnI CCWGG 2 cut(s) 742, 1195
AjuI GAANNNNNNNTTGG 2 cut(s) 2223, 2255
Alw21I GWGCWC 1 cut(s) 1336
Alw26I GTCTC 9 cut(s) 772, 1174, 1244, 1554, 1827, 2197, 2373, 2660, 2829
AlwI GGATC 4 cut(s) 106, 1340, 2368, 2475
AoxI GGCC 3 cut(s) 645, 876, 1371
ApeKI GCWGC 6 cut(s) 8, 350, 698, 1379, 2393, 2857
ApoI RAATTY 9 cut(s) 331, 570, 1814, 2005, 2188, 2404, 2534, 2549, 2709
AseI ATTAAT 1 cut(s) 35
Asp700I GAANNNNTTC 1 cut(s) 2169
AspLEI GCGC 1 cut(s) 269
AspS9I GGNCC 5 cut(s) 646, 1299, 1371, 1624, 1960
AsuHPI GGTGA 3 cut(s) 499, 2336, 2706
AsuNHI GCTAGC 1 cut(s) 391
AvaII GGWCC 3 cut(s) 1299, 1624, 1960
AxyI CCTNAGG 1 cut(s) 2175
BanII GRGCYC 2 cut(s) 2496, 2952
BarI GAAGNNNNNNTAC 2 cut(s) 2574, 2606
Bbv12I GWGCWC 1 cut(s) 1336
BbvI GCAGC 6 cut(s) 20, 337, 710, 1366, 2405, 2869
BccI CCATC 7 cut(s) 637, 1561, 1630, 1840, 2291, 2665, 2725
BceAI ACGGC 1 cut(s) 1768
BciT130I CCWGG 2 cut(s) 744, 1197
BciVI GTATCC 1 cut(s) 991
BclI TGATCA 2 cut(s) 1840, 2193
BcoDI GTCTC 9 cut(s) 772, 1174, 1244, 1554, 1827, 2197, 2373, 2660, 2829
BcuI ACTAGT 1 cut(s) 2350
BfaI CTAG 4 cut(s) 392, 1737, 1965, 2351
BfuAI ACCTGC 1 cut(s) 2851
BfuI GTATCC 1 cut(s) 991
BisI GCNGC 7 cut(s) 9, 351, 681, 699, 1380, 2394, 2858
BlpI GCTNAGC 1 cut(s) 396
BlsI GCNGC 7 cut(s) 10, 352, 682, 700, 1381, 2395, 2859
Bme1390I CCNGG 2 cut(s) 744, 1197
Bme18I GGWCC 3 cut(s) 1299, 1624, 1960
BmgT120I GGNCC 5 cut(s) 646, 1299, 1371, 1624, 1960
BmiI GGNNCC 3 cut(s) 1962, 2495, 2951
BmrFI CCNGG 2 cut(s) 744, 1197
BmrI ACTGGG 2 cut(s) 493, 2981
BmtI GCTAGC 1 cut(s) 395
BmuI ACTGGG 2 cut(s) 493, 2981
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 1230
Bpu1102I GCTNAGC 1 cut(s) 396
BpuEI CTTGAG 7 cut(s) 339, 754, 1626, 2083, 2221, 2684, 2849
Bsa29I ATCGAT 1 cut(s) 1463
BsaHI GRCGYC 1 cut(s) 2302
BsaJI CCNNGG 3 cut(s) 373, 455, 1259
BsaWI WCCGGW 1 cut(s) 313
BsaXI ACNNNNNCTCC 2 cut(s) 2858, 2888
Bsc4I CCNNNNNNNGG 4 cut(s) 320, 749, 2464, 2803
Bse1I ACTGG 4 cut(s) 488, 681, 2023, 2987
Bse21I CCTNAGG 1 cut(s) 2175
Bse3DI GCAATG 4 cut(s) 825, 1067, 1696, 2929
BseBI CCWGG 2 cut(s) 744, 1197
BseCI ATCGAT 1 cut(s) 1463
BseDI CCNNGG 3 cut(s) 373, 455, 1259
BseLI CCNNNNNNNGG 4 cut(s) 320, 749, 2464, 2803
BseMI GCAATG 4 cut(s) 825, 1067, 1696, 2929
BseMII CTCAG 1 cut(s) 568
BseNI ACTGG 4 cut(s) 488, 681, 2023, 2987
BseRI GAGGAG 4 cut(s) 234, 1326, 2042, 2846
BseXI GCAGC 6 cut(s) 20, 337, 710, 1366, 2405, 2869
BseYI CCCAGC 1 cut(s) 2320
Bsh1236I CGCG 4 cut(s) 267, 269, 1831, 2973
BshFI GGCC 3 cut(s) 647, 878, 1373
BshVI ATCGAT 1 cut(s) 1463
BsiHKAI GWGCWC 1 cut(s) 1336
BsiSI CCGG 1 cut(s) 314
BslFI GGGAC 2 cut(s) 245, 1946
BslI CCNNNNNNNGG 4 cut(s) 320, 749, 2464, 2803
BsmAI GTCTC 9 cut(s) 772, 1174, 1244, 1554, 1827, 2197, 2373, 2660, 2829
BsmBI CGTCTC 2 cut(s) 2660, 2829
BsmFI GGGAC 2 cut(s) 245, 1946
BsmI GAATGC 1 cut(s) 1319
BsnI GGCC 3 cut(s) 647, 878, 1373
Bsp1286I GDGCHC 3 cut(s) 1336, 2496, 2952
Bsp1720I GCTNAGC 1 cut(s) 396
Bsp68I TCGCGA 1 cut(s) 2973
BspACI CCGC 5 cut(s) 473, 680, 2465, 2501, 2797
BspANI GGCC 3 cut(s) 647, 878, 1373
BspCNI CTCAG 1 cut(s) 567
BspDI ATCGAT 1 cut(s) 1463
BspFNI CGCG 4 cut(s) 267, 269, 1831, 2973
BspHI TCATGA 2 cut(s) 130, 511
BspLI GGNNCC 3 cut(s) 1962, 2495, 2951
BspMI ACCTGC 1 cut(s) 2851
BspOI GCTAGC 1 cut(s) 395
BspPI GGATC 4 cut(s) 106, 1340, 2368, 2475
BsrDI GCAATG 4 cut(s) 825, 1067, 1696, 2929
BsrI ACTGG 4 cut(s) 488, 681, 2023, 2987
BssECI CCNNGG 3 cut(s) 373, 455, 1259
BssNAI GTATAC 1 cut(s) 2939
BssNI GRCGYC 1 cut(s) 2302
BssT1I CCWWGG 1 cut(s) 1259
Bst1107I GTATAC 1 cut(s) 2939
Bst2UI CCWGG 2 cut(s) 744, 1197
Bst4CI ACNGT 5 cut(s) 126, 766, 2671, 2783, 2885
Bst6I CTCTTC 3 cut(s) 852, 1097, 2733
BstACI GRCGYC 1 cut(s) 2302
BstC8I GCNNGC 4 cut(s) 393, 1276, 1861, 2120
BstDEI CTNAG 9 cut(s) 396, 433, 554, 712, 1230, 2175, 2512, 2762, 2942
BstDSI CCRYGG 1 cut(s) 455
BstFNI CGCG 4 cut(s) 267, 269, 1831, 2973
BstHHI GCGC 1 cut(s) 269
BstMAI GTCTC 9 cut(s) 772, 1174, 1244, 1554, 1827, 2197, 2373, 2660, 2829
BstMWI GCNNNNNNNGC 7 cut(s) 397, 515, 677, 1235, 1379, 2326, 2500
BstNI CCWGG 2 cut(s) 744, 1197
BstNSI RCATGY 3 cut(s) 1877, 2210, 2375
BstSCI CCNGG 2 cut(s) 742, 1195
BstUI CGCG 4 cut(s) 267, 269, 1831, 2973
BstV1I GCAGC 6 cut(s) 20, 337, 710, 1366, 2405, 2869
BstX2I RGATCY 3 cut(s) 98, 1345, 2467
BstYI RGATCY 3 cut(s) 98, 1345, 2467
BstZ17I GTATAC 1 cut(s) 2939
Bsu15I ATCGAT 1 cut(s) 1463
Bsu36I CCTNAGG 1 cut(s) 2175
BsuI GTATCC 1 cut(s) 991
BsuRI GGCC 3 cut(s) 647, 878, 1373
BsuTUI ATCGAT 1 cut(s) 1463
BtgI CCRYGG 1 cut(s) 455
BtgZI GCGATG 1 cut(s) 453
BtsIMutI CAGTG 3 cut(s) 122, 674, 1836
BtuMI TCGCGA 1 cut(s) 2973
BveI ACCTGC 1 cut(s) 2851
Cac8I GCNNGC 4 cut(s) 393, 1276, 1861, 2120
CciI TCATGA 2 cut(s) 130, 511
CfoI GCGC 1 cut(s) 269
Cfr13I GGNCC 5 cut(s) 646, 1299, 1371, 1624, 1960
ClaI ATCGAT 1 cut(s) 1463
CseI GACGC 3 cut(s) 660, 1837, 2291
CspCI CAANNNNNGTGG 6 cut(s) 190, 225, 1338, 1373, 1882, 1917
DdeI CTNAG 9 cut(s) 396, 433, 554, 712, 1230, 2175, 2512, 2762, 2942
DraI TTTAAA 1 cut(s) 2880
Eam1104I CTCTTC 3 cut(s) 852, 1097, 2733
EarI CTCTTC 3 cut(s) 852, 1097, 2733
Eco130I CCWWGG 1 cut(s) 1259
Eco24I GRGCYC 2 cut(s) 2496, 2952
Eco32I GATATC 2 cut(s) 823, 1649
Eco47I GGWCC 3 cut(s) 1299, 1624, 1960
Eco57I CTGAAG 3 cut(s) 202, 2117, 2714
Eco81I CCTNAGG 1 cut(s) 2175
EcoO109I RGGNCCY 1 cut(s) 1960
EcoRI GAATTC 1 cut(s) 2534
EcoRII CCWGG 2 cut(s) 742, 1195
EcoRV GATATC 2 cut(s) 823, 1649
EcoT14I CCWWGG 1 cut(s) 1259
EcoT22I ATGCAT 1 cut(s) 1779
EcoT38I GRGCYC 2 cut(s) 2496, 2952
ErhI CCWWGG 1 cut(s) 1259
Esp3I CGTCTC 2 cut(s) 2660, 2829
FalI AAGNNNNNCTT 4 cut(s) 849, 881, 2755, 2787
FaqI GGGAC 2 cut(s) 245, 1946
FbaI TGATCA 2 cut(s) 1840, 2193
FblI GTMKAC 2 cut(s) 949, 2938
Fnu4HI GCNGC 7 cut(s) 9, 351, 681, 699, 1380, 2394, 2858
FriOI GRGCYC 2 cut(s) 2496, 2952
Fsp4HI GCNGC 7 cut(s) 9, 351, 681, 699, 1380, 2394, 2858
FspBI CTAG 4 cut(s) 392, 1737, 1965, 2351
GlaI GCGC 1 cut(s) 268
GluI GCNGC 7 cut(s) 9, 351, 681, 699, 1380, 2394, 2858
GsaI CCCAGC 1 cut(s) 2324
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 3 cut(s) 647, 878, 1373
HapII CCGG 1 cut(s) 314
HgaI GACGC 3 cut(s) 660, 1837, 2291
HhaI GCGC 1 cut(s) 269
Hin1I GRCGYC 1 cut(s) 2302
Hin6I GCGC 1 cut(s) 267
HinP1I GCGC 1 cut(s) 267
HincII GTYRAC 1 cut(s) 1095
HindII GTYRAC 1 cut(s) 1095
HindIII AAGCTT 3 cut(s) 398, 772, 2518
HpaII CCGG 1 cut(s) 314
HphI GGTGA 3 cut(s) 499, 2336, 2706
Hpy166II GTNNAC 5 cut(s) 950, 1095, 1360, 1994, 2939
Hpy188I TCNGA 9 cut(s) 249, 374, 820, 902, 985, 1017, 1845, 2136, 2839
Hpy8I GTNNAC 5 cut(s) 950, 1095, 1360, 1994, 2939
Hpy99I CGWCG 1 cut(s) 260
HpyAV CCTTC 9 cut(s) 79, 215, 226, 586, 795, 1362, 2286, 2483, 2713
HpyCH4III ACNGT 5 cut(s) 126, 766, 2671, 2783, 2885
HpyCH4IV ACGT 5 cut(s) 504, 1128, 2138, 2168, 2822
HpyF10VI GCNNNNNNNGC 7 cut(s) 397, 515, 677, 1235, 1379, 2326, 2500
HpyF3I CTNAG 9 cut(s) 396, 433, 554, 712, 1230, 2175, 2512, 2762, 2942
HpySE526I ACGT 5 cut(s) 504, 1128, 2138, 2168, 2822
Hsp92I GRCGYC 1 cut(s) 2302
HspAI GCGC 1 cut(s) 267
Ksp22I TGATCA 2 cut(s) 1840, 2193
LmnI GCTCC 5 cut(s) 1198, 1339, 2499, 2610, 2955
Lsp1109I GCAGC 6 cut(s) 20, 337, 710, 1366, 2405, 2869
MaeI CTAG 4 cut(s) 392, 1737, 1965, 2351
MaeII ACGT 5 cut(s) 504, 1128, 2138, 2168, 2822
MaeIII GTNAC 8 cut(s) 337, 672, 779, 1051, 1213, 1967, 2453, 2581
MfeI CAATTG 2 cut(s) 2043, 2597
MflI RGATCY 3 cut(s) 98, 1345, 2467
MhlI GDGCHC 3 cut(s) 1336, 2496, 2952
MlyI GAGTC 5 cut(s) 851, 891, 1176, 2251, 2843
MmeI TCCRAC 6 cut(s) 209, 642, 798, 1008, 2521, 2817
Mph1103I ATGCAT 1 cut(s) 1779
MroXI GAANNNNTTC 1 cut(s) 2169
MslI CAYNNNNRTG 1 cut(s) 1673
MspI CCGG 1 cut(s) 314
MspR9I CCNGG 2 cut(s) 744, 1197
MunI CAATTG 2 cut(s) 2043, 2597
Mva1269I GAATGC 1 cut(s) 1319
MvaI CCWGG 2 cut(s) 744, 1197
MvnI CGCG 4 cut(s) 267, 269, 1831, 2973
MwoI GCNNNNNNNGC 7 cut(s) 397, 515, 677, 1235, 1379, 2326, 2500
NheI GCTAGC 1 cut(s) 391
NlaIV GGNNCC 3 cut(s) 1962, 2495, 2951
NmuCI GTSAC 4 cut(s) 337, 672, 779, 2453
NruI TCGCGA 1 cut(s) 2973
NsiI ATGCAT 1 cut(s) 1779
NspI RCATGY 3 cut(s) 1877, 2210, 2375
PagI TCATGA 2 cut(s) 130, 511
PaqCI CACCTGC 1 cut(s) 2851
PciI ACATGT 2 cut(s) 2206, 2371
PcsI WCGNNNNNNNCGW 1 cut(s) 1134
PctI GAATGC 1 cut(s) 1319
PdmI GAANNNNTTC 1 cut(s) 2169
PfeI GAWTC 9 cut(s) 278, 378, 850, 1006, 1025, 1465, 1867, 2699, 2928
PflFI GACNNNGTC 1 cut(s) 1622
PfoI TCCNGGA 1 cut(s) 1195
PkrI GCNGC 7 cut(s) 10, 352, 682, 700, 1381, 2395, 2859
PleI GAGTC 5 cut(s) 850, 891, 1176, 2251, 2842
PpsI GAGTC 5 cut(s) 850, 891, 1176, 2251, 2842
PpuMI RGGWCCY 1 cut(s) 1960
PscI ACATGT 2 cut(s) 2206, 2371
PshBI ATTAAT 1 cut(s) 35
Psp1406I AACGTT 1 cut(s) 2168
Psp5II RGGWCCY 1 cut(s) 1960
Psp6I CCWGG 2 cut(s) 742, 1195
PspFI CCCAGC 1 cut(s) 2320
PspGI CCWGG 2 cut(s) 742, 1195
PspN4I GGNNCC 3 cut(s) 1962, 2495, 2951
PspPI GGNCC 5 cut(s) 646, 1299, 1371, 1624, 1960
PspPPI RGGWCCY 1 cut(s) 1960
PsuI RGATCY 3 cut(s) 98, 1345, 2467
PsyI GACNNNGTC 1 cut(s) 1622
RruI TCGCGA 1 cut(s) 2973
RseI CAYNNNNRTG 1 cut(s) 1673
SatI GCNGC 7 cut(s) 9, 351, 681, 699, 1380, 2394, 2858
Sau96I GGNCC 5 cut(s) 646, 1299, 1371, 1624, 1960
SchI GAGTC 5 cut(s) 851, 891, 1176, 2251, 2843
ScrFI CCNGG 2 cut(s) 744, 1197
SduI GDGCHC 3 cut(s) 1336, 2496, 2952
SinI GGWCC 3 cut(s) 1299, 1624, 1960
SmiMI CAYNNNNRTG 1 cut(s) 1673
SmlI CTYRAG 7 cut(s) 354, 769, 1641, 2062, 2200, 2663, 2828
SmoI CTYRAG 7 cut(s) 354, 769, 1641, 2062, 2200, 2663, 2828
SpeI ACTAGT 1 cut(s) 2350
SsiI CCGC 5 cut(s) 473, 680, 2465, 2501, 2797
SspI AATATT 3 cut(s) 927, 1697, 2651
SspMI CTAG 4 cut(s) 392, 1737, 1965, 2351
StyD4I CCNGG 2 cut(s) 742, 1195
StyI CCWWGG 1 cut(s) 1259
TaaI ACNGT 5 cut(s) 126, 766, 2671, 2783, 2885
TaiI ACGT 5 cut(s) 507, 1131, 2141, 2171, 2825
TaqI TCGA 6 cut(s) 840, 1004, 1122, 1178, 1463, 2578
TaqII GACCGA 2 cut(s) 325, 767
TatI WGTACW 2 cut(s) 1445, 2960
TauI GCSGC 1 cut(s) 683
TfiI GAWTC 9 cut(s) 278, 378, 850, 1006, 1025, 1465, 1867, 2699, 2928
TscAI CASTG 3 cut(s) 129, 681, 1843
TseFI GTSAC 4 cut(s) 337, 672, 779, 2453
TseI GCWGC 6 cut(s) 8, 350, 698, 1379, 2393, 2857
Tsp45I GTSAC 4 cut(s) 337, 672, 779, 2453
TspDTI ATGAA 9 cut(s) 119, 143, 147, 160, 164, 599, 694, 1707, 2349
TspGWI ACGGA 4 cut(s) 244, 472, 1778, 2888
TspRI CASTG 3 cut(s) 129, 681, 1843
Tth111I GACNNNGTC 1 cut(s) 1622
VpaK11BI GGWCC 3 cut(s) 1299, 1624, 1960
VspI ATTAAT 1 cut(s) 35
XapI RAATTY 9 cut(s) 331, 570, 1814, 2005, 2188, 2404, 2534, 2549, 2709
XceI RCATGY 3 cut(s) 1877, 2210, 2375
XcmI CCANNNNNNNNNTGG 2 cut(s) 886, 1672
XmiI GTMKAC 2 cut(s) 949, 2938
XmnI GAANNNNTTC 1 cut(s) 2169
XspI CTAG 4 cut(s) 392, 1737, 1965, 2351
Zsp2I ATGCAT 1 cut(s) 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.