tuftelin-interacting protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 231 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 299, 344 |
| AatII | GACGTC | 2 cut(s) | 342, 405 |
| Acc36I | ACCTGC | 1 cut(s) | 231 |
| Acc65I | GGTACC | 1 cut(s) | 1263 |
| AccB1I | GGYRCC | 2 cut(s) | 1263, 1375 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 667, 2600 |
| AccII | CGCG | 2 cut(s) | 335, 1177 |
| AccIII | TCCGGA | 1 cut(s) | 2614 |
| AciI | CCGC | 5 cut(s) | 138, 321, 324, 335, 2606 |
| AclI | AACGTT | 1 cut(s) | 174 |
| AclWI | GGATC | 7 cut(s) | 64, 77, 643, 656, 1803, 1928, 2198 |
| AcoI | YGGCCR | 2 cut(s) | 585, 1252 |
| AcsI | RAATTY | 4 cut(s) | 31, 1369, 1496, 1576 |
| AcuI | CTGAAG | 4 cut(s) | 956, 1762, 1860, 2562 |
| AcvI | CACGTG | 1 cut(s) | 270 |
| AcyI | GRCGYC | 2 cut(s) | 339, 402 |
| AdeI | CACNNNGTG | 3 cut(s) | 436, 2046, 2302 |
| AfaI | GTAC | 5 cut(s) | 353, 698, 899, 1265, 1388 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 66, 634, 667, 1189, 1779, 2213, 2600 |
| AflIII | ACRYGT | 3 cut(s) | 267, 579, 1383 |
| AgsI | TTSAA | 7 cut(s) | 799, 889, 1021, 1093, 1918, 2567, 2627 |
| AjnI | CCWGG | 3 cut(s) | 1544, 2042, 2223 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 581, 613, 1100, 1132 |
| Alw21I | GWGCWC | 5 cut(s) | 550, 565, 1412, 2179, 2352 |
| Alw26I | GTCTC | 6 cut(s) | 217, 254, 1208, 1495, 1521, 1567 |
| Alw44I | GTGCAC | 3 cut(s) | 546, 561, 2175 |
| AlwI | GGATC | 7 cut(s) | 64, 77, 643, 656, 1803, 1928, 2198 |
| Ama87I | CYCGRG | 2 cut(s) | 7, 1259 |
| Aor13HI | TCCGGA | 1 cut(s) | 2614 |
| AoxI | GGCC | 8 cut(s) | 57, 503, 573, 585, 594, 1252, 2290, 2569 |
| ApaLI | GTGCAC | 3 cut(s) | 546, 561, 2175 |
| ApeKI | GCWGC | 6 cut(s) | 523, 1111, 1313, 1448, 2113, 2236 |
| ApoI | RAATTY | 4 cut(s) | 31, 1369, 1496, 1576 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 392, 424 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 780 |
| Asp718I | GGTACC | 1 cut(s) | 1263 |
| AspLEI | GCGC | 4 cut(s) | 335, 1177, 1529, 2590 |
| AspS9I | GGNCC | 7 cut(s) | 37, 57, 301, 769, 1289, 1769, 2603 |
| AsuC2I | CCSGG | 7 cut(s) | 56, 629, 704, 773, 1172, 1260, 1261 |
| AsuHPI | GGTGA | 5 cut(s) | 1451, 2032, 2237, 2373, 2386 |
| AsuII | TTCGAA | 1 cut(s) | 279 |
| AvaI | CYCGRG | 2 cut(s) | 7, 1259 |
| AvaII | GGWCC | 6 cut(s) | 37, 301, 769, 1289, 1769, 2603 |
| AxyI | CCTNAGG | 1 cut(s) | 1869 |
| BaeGI | GKGCMC | 3 cut(s) | 550, 565, 2179 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 221, 254, 889, 922, 1247, 1280 |
| BamHI | GGATCC | 2 cut(s) | 69, 648 |
| BanI | GGYRCC | 2 cut(s) | 1263, 1375 |
| BanII | GRGCYC | 4 cut(s) | 793, 1412, 1669, 2352 |
| BauI | CACGAG | 1 cut(s) | 422 |
| BbrPI | CACGTG | 1 cut(s) | 270 |
| BbsI | GAAGAC | 4 cut(s) | 255, 866, 1604, 2075 |
| Bbv12I | GWGCWC | 5 cut(s) | 550, 565, 1412, 2179, 2352 |
| BbvI | GCAGC | 6 cut(s) | 510, 1123, 1300, 1460, 2100, 2223 |
| BccI | CCATC | 4 cut(s) | 669, 1280, 1355, 2141 |
| BceAI | ACGGC | 5 cut(s) | 44, 334, 424, 496, 1870 |
| BciT130I | CCWGG | 3 cut(s) | 1546, 2044, 2225 |
| BciVI | GTATCC | 1 cut(s) | 2457 |
| BclI | TGATCA | 3 cut(s) | 1482, 1678, 2242 |
| BcnI | CCSGG | 7 cut(s) | 56, 629, 704, 773, 1172, 1260, 1261 |
| BcoDI | GTCTC | 6 cut(s) | 217, 254, 1208, 1495, 1521, 1567 |
| BfaI | CTAG | 2 cut(s) | 2012, 2249 |
| BfmI | CTRYAG | 1 cut(s) | 856 |
| BfuAI | ACCTGC | 1 cut(s) | 231 |
| BfuI | GTATCC | 1 cut(s) | 2457 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 593 |
| BglII | AGATCT | 2 cut(s) | 11, 1684 |
| BisI | GCNGC | 9 cut(s) | 139, 322, 325, 524, 1112, 1314, 1449, 2114, 2237 |
| BlsI | GCNGC | 9 cut(s) | 140, 323, 326, 525, 1113, 1315, 1450, 2115, 2238 |
| Bme18I | GGWCC | 6 cut(s) | 37, 301, 769, 1289, 1769, 2603 |
| BmeT110I | CYCGRG | 2 cut(s) | 7, 1259 |
| BmgT120I | GGNCC | 7 cut(s) | 37, 57, 301, 769, 1289, 1769, 2603 |
| BmsI | GCATC | 9 cut(s) | 1135, 1546, 1558, 1712, 1740, 2188, 2197, 2448, 2591 |
| BoxI | GACNNNNGTC | 1 cut(s) | 458 |
| BpiI | GAAGAC | 4 cut(s) | 255, 866, 1604, 2075 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2339, 2371 |
| Bpu14I | TTCGAA | 1 cut(s) | 279 |
| BpuEI | CTTGAG | 2 cut(s) | 706, 1709 |
| BpuMI | CCSGG | 7 cut(s) | 56, 629, 704, 773, 1172, 1260, 1261 |
| Bsa29I | ATCGAT | 1 cut(s) | 1284 |
| BsaAI | YACGTR | 5 cut(s) | 233, 270, 355, 580, 1386 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1046, 1683, 2202 |
| BsaHI | GRCGYC | 2 cut(s) | 339, 402 |
| BsaI | GGTCTC | 1 cut(s) | 1208 |
| BsaJI | CCNNGG | 6 cut(s) | 541, 1183, 1259, 1544, 2063, 2223 |
| BsaWI | WCCGGW | 3 cut(s) | 756, 766, 2614 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 66, 634, 667, 1189, 1779, 2213, 2600 |
| Bse118I | RCCGGY | 2 cut(s) | 1830, 2272 |
| Bse1I | ACTGG | 2 cut(s) | 1218, 2184 |
| Bse21I | CCTNAGG | 1 cut(s) | 1869 |
| Bse3DI | GCAATG | 3 cut(s) | 1110, 1800, 2475 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1046, 1683, 2202 |
| BseAI | TCCGGA | 1 cut(s) | 2614 |
| BseBI | CCWGG | 3 cut(s) | 1546, 2044, 2225 |
| BseCI | ATCGAT | 1 cut(s) | 1284 |
| BseDI | CCNNGG | 6 cut(s) | 541, 1183, 1259, 1544, 2063, 2223 |
| BseJI | GATNNNNATC | 3 cut(s) | 1046, 1683, 2202 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 66, 634, 667, 1189, 1779, 2213, 2600 |
| BseMI | GCAATG | 3 cut(s) | 1110, 1800, 2475 |
| BseMII | CTCAG | 4 cut(s) | 776, 1883, 1996, 2430 |
| BseNI | ACTGG | 2 cut(s) | 1218, 2184 |
| BseRI | GAGGAG | 5 cut(s) | 133, 136, 407, 1732, 2360 |
| BseSI | GKGCMC | 3 cut(s) | 550, 565, 2179 |
| BseXI | GCAGC | 6 cut(s) | 510, 1123, 1300, 1460, 2100, 2223 |
| BseYI | CCCAGC | 2 cut(s) | 868, 1725 |
| BsgI | GTGCAG | 2 cut(s) | 1178, 1217 |
| Bsh1236I | CGCG | 2 cut(s) | 335, 1177 |
| Bsh1285I | CGRYCG | 2 cut(s) | 130, 559 |
| BshFI | GGCC | 8 cut(s) | 59, 505, 575, 587, 596, 1254, 2292, 2571 |
| BshNI | GGYRCC | 2 cut(s) | 1263, 1375 |
| BshVI | ATCGAT | 1 cut(s) | 1284 |
| BsiEI | CGRYCG | 2 cut(s) | 130, 559 |
| BsiHKAI | GWGCWC | 5 cut(s) | 550, 565, 1412, 2179, 2352 |
| BsiHKCI | CYCGRG | 2 cut(s) | 7, 1259 |
| BslFI | GGGAC | 1 cut(s) | 1782 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 66, 634, 667, 1189, 1779, 2213, 2600 |
| BsmAI | GTCTC | 6 cut(s) | 217, 254, 1208, 1495, 1521, 1567 |
| BsmBI | CGTCTC | 3 cut(s) | 217, 254, 1521 |
| BsmFI | GGGAC | 1 cut(s) | 1782 |
| BsmI | GAATGC | 1 cut(s) | 870 |
| BsnI | GGCC | 8 cut(s) | 59, 505, 575, 587, 596, 1254, 2292, 2571 |
| Bso31I | GGTCTC | 1 cut(s) | 1208 |
| BsoBI | CYCGRG | 2 cut(s) | 7, 1259 |
| Bsp119I | TTCGAA | 1 cut(s) | 279 |
| Bsp1286I | GDGCHC | 7 cut(s) | 550, 565, 793, 1412, 1669, 2179, 2352 |
| Bsp13I | TCCGGA | 1 cut(s) | 2614 |
| BspACI | CCGC | 5 cut(s) | 138, 321, 324, 335, 2606 |
| BspANI | GGCC | 8 cut(s) | 59, 505, 575, 587, 596, 1254, 2292, 2571 |
| BspCNI | CTCAG | 4 cut(s) | 777, 1882, 1995, 2429 |
| BspDI | ATCGAT | 1 cut(s) | 1284 |
| BspEI | TCCGGA | 1 cut(s) | 2614 |
| BspFNI | CGCG | 2 cut(s) | 335, 1177 |
| BspHI | TCATGA | 1 cut(s) | 1648 |
| BspMI | ACCTGC | 1 cut(s) | 231 |
| BspPI | GGATC | 7 cut(s) | 64, 77, 643, 656, 1803, 1928, 2198 |
| BspQI | GCTCTTC | 1 cut(s) | 1116 |
| BspT104I | TTCGAA | 1 cut(s) | 279 |
| BspT107I | GGYRCC | 2 cut(s) | 1263, 1375 |
| BspTNI | GGTCTC | 1 cut(s) | 1208 |
| BsrDI | GCAATG | 3 cut(s) | 1110, 1800, 2475 |
| BsrFI | RCCGGY | 2 cut(s) | 1830, 2272 |
| BsrI | ACTGG | 2 cut(s) | 1218, 2184 |
| BssAI | RCCGGY | 2 cut(s) | 1830, 2272 |
| BssECI | CCNNGG | 6 cut(s) | 541, 1183, 1259, 1544, 2063, 2223 |
| BssNI | GRCGYC | 2 cut(s) | 339, 402 |
| BssSI | CACGAG | 1 cut(s) | 422 |
| BssT1I | CCWWGG | 1 cut(s) | 2063 |
| Bst2BI | CACGAG | 1 cut(s) | 422 |
| Bst2UI | CCWGG | 3 cut(s) | 1546, 2044, 2225 |
| Bst4CI | ACNGT | 7 cut(s) | 131, 545, 560, 1393, 2174, 2500, 2545 |
| Bst6I | CTCTTC | 3 cut(s) | 771, 1116, 2157 |
| BstACI | GRCGYC | 2 cut(s) | 339, 402 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1322 |
| BstBAI | YACGTR | 5 cut(s) | 233, 270, 355, 580, 1386 |
| BstBI | TTCGAA | 1 cut(s) | 279 |
| BstC8I | GCNNGC | 9 cut(s) | 87, 437, 538, 550, 573, 1699, 1832, 2472, 2494 |
| BstDEI | CTNAG | 5 cut(s) | 785, 1520, 1869, 1982, 2416 |
| BstDSI | CCRYGG | 1 cut(s) | 541 |
| BstFNI | CGCG | 2 cut(s) | 335, 1177 |
| BstHHI | GCGC | 4 cut(s) | 335, 1177, 1529, 2590 |
| BstMAI | GTCTC | 6 cut(s) | 217, 254, 1208, 1495, 1521, 1567 |
| BstMCI | CGRYCG | 2 cut(s) | 130, 559 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 330, 593, 1322, 1664 |
| BstNI | CCWGG | 3 cut(s) | 1546, 2044, 2225 |
| BstNSI | RCATGY | 1 cut(s) | 523 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 458 |
| BstSFI | CTRYAG | 1 cut(s) | 856 |
| BstSLI | GKGCMC | 3 cut(s) | 550, 565, 2179 |
| BstUI | CGCG | 2 cut(s) | 335, 1177 |
| BstV1I | GCAGC | 6 cut(s) | 510, 1123, 1300, 1460, 2100, 2223 |
| BstV2I | GAAGAC | 4 cut(s) | 255, 866, 1604, 2075 |
| BstX2I | RGATCY | 4 cut(s) | 11, 69, 648, 1684 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1579 |
| BstYI | RGATCY | 4 cut(s) | 11, 69, 648, 1684 |
| Bsu15I | ATCGAT | 1 cut(s) | 1284 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1869 |
| BsuI | GTATCC | 1 cut(s) | 2457 |
| BsuRI | GGCC | 8 cut(s) | 59, 505, 575, 587, 596, 1254, 2292, 2571 |
| BsuTUI | ATCGAT | 1 cut(s) | 1284 |
| BtgI | CCRYGG | 1 cut(s) | 541 |
| BtsI | GCAGTG | 4 cut(s) | 430, 1903, 1936, 2006 |
| BveI | ACCTGC | 1 cut(s) | 231 |
| Cac8I | GCNNGC | 9 cut(s) | 87, 437, 538, 550, 573, 1699, 1832, 2472, 2494 |
| CciI | TCATGA | 1 cut(s) | 1648 |
| CfoI | GCGC | 4 cut(s) | 335, 1177, 1529, 2590 |
| Cfr10I | RCCGGY | 2 cut(s) | 1830, 2272 |
| Cfr13I | GGNCC | 7 cut(s) | 37, 57, 301, 769, 1289, 1769, 2603 |
| Cfr9I | CCCGGG | 1 cut(s) | 1259 |
| ClaI | ATCGAT | 1 cut(s) | 1284 |
| CpoI | CGGWCCG | 1 cut(s) | 769 |
| CseI | GACGC | 2 cut(s) | 1309, 1598 |
| CsiI | ACCWGGT | 1 cut(s) | 2042 |
| Csp6I | GTAC | 5 cut(s) | 352, 697, 898, 1264, 1387 |
| CspI | CGGWCCG | 1 cut(s) | 769 |
| CviQI | GTAC | 5 cut(s) | 352, 697, 898, 1264, 1387 |
| DdeI | CTNAG | 5 cut(s) | 785, 1520, 1869, 1982, 2416 |
| DraIII | CACNNNGTG | 3 cut(s) | 436, 2046, 2302 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 299, 344 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 299, 344 |
| EaeI | YGGCCR | 2 cut(s) | 585, 1252 |
| Eam1104I | CTCTTC | 3 cut(s) | 771, 1116, 2157 |
| EarI | CTCTTC | 3 cut(s) | 771, 1116, 2157 |
| Ecl136II | GAGCTC | 2 cut(s) | 1410, 2350 |
| Eco130I | CCWWGG | 1 cut(s) | 2063 |
| Eco147I | AGGCCT | 3 cut(s) | 575, 596, 2571 |
| Eco24I | GRGCYC | 4 cut(s) | 793, 1412, 1669, 2352 |
| Eco31I | GGTCTC | 1 cut(s) | 1208 |
| Eco47I | GGWCC | 6 cut(s) | 37, 301, 769, 1289, 1769, 2603 |
| Eco53kI | GAGCTC | 2 cut(s) | 1410, 2350 |
| Eco57I | CTGAAG | 4 cut(s) | 956, 1762, 1860, 2562 |
| Eco72I | CACGTG | 1 cut(s) | 270 |
| Eco81I | CCTNAGG | 1 cut(s) | 1869 |
| Eco88I | CYCGRG | 2 cut(s) | 7, 1259 |
| EcoICRI | GAGCTC | 2 cut(s) | 1410, 2350 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1769 |
| EcoRII | CCWGG | 3 cut(s) | 1544, 2042, 2223 |
| EcoT14I | CCWWGG | 1 cut(s) | 2063 |
| EcoT22I | ATGCAT | 1 cut(s) | 2402 |
| EcoT38I | GRGCYC | 4 cut(s) | 793, 1412, 1669, 2352 |
| ErhI | CCWWGG | 1 cut(s) | 2063 |
| Esp3I | CGTCTC | 3 cut(s) | 217, 254, 1521 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2223, 2255 |
| FaqI | GGGAC | 1 cut(s) | 1782 |
| FauNDI | CATATG | 1 cut(s) | 960 |
| FbaI | TGATCA | 3 cut(s) | 1482, 1678, 2242 |
| Fnu4HI | GCNGC | 9 cut(s) | 139, 322, 325, 524, 1112, 1314, 1449, 2114, 2237 |
| FriOI | GRGCYC | 4 cut(s) | 793, 1412, 1669, 2352 |
| Fsp4HI | GCNGC | 9 cut(s) | 139, 322, 325, 524, 1112, 1314, 1449, 2114, 2237 |
| FspBI | CTAG | 2 cut(s) | 2012, 2249 |
| GlaI | GCGC | 4 cut(s) | 334, 1176, 1528, 2589 |
| GluI | GCNGC | 9 cut(s) | 139, 322, 325, 524, 1112, 1314, 1449, 2114, 2237 |
| GsaI | CCCAGC | 2 cut(s) | 872, 1729 |
| HaeIII | GGCC | 8 cut(s) | 59, 505, 575, 587, 596, 1254, 2292, 2571 |
| HgaI | GACGC | 2 cut(s) | 1309, 1598 |
| HhaI | GCGC | 4 cut(s) | 335, 1177, 1529, 2590 |
| Hin1I | GRCGYC | 2 cut(s) | 339, 402 |
| Hin6I | GCGC | 4 cut(s) | 333, 1175, 1527, 2588 |
| HinP1I | GCGC | 4 cut(s) | 333, 1175, 1527, 2588 |
| HincII | GTYRAC | 1 cut(s) | 466 |
| HindII | GTYRAC | 1 cut(s) | 466 |
| HindIII | AAGCTT | 2 cut(s) | 710, 1784 |
| HphI | GGTGA | 5 cut(s) | 1451, 2032, 2237, 2373, 2386 |
| Hpy166II | GTNNAC | 8 cut(s) | 466, 548, 563, 1389, 1882, 2049, 2177, 2326 |
| Hpy8I | GTNNAC | 8 cut(s) | 466, 548, 563, 1389, 1882, 2049, 2177, 2326 |
| HpyAV | CCTTC | 5 cut(s) | 607, 1006, 1015, 1138, 1966 |
| HpyCH4III | ACNGT | 7 cut(s) | 131, 545, 560, 1393, 2174, 2500, 2545 |
| HpyCH4IV | ACGT | 9 cut(s) | 174, 232, 269, 339, 354, 402, 579, 642, 1385 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 330, 593, 1322, 1664 |
| HpyF3I | CTNAG | 5 cut(s) | 785, 1520, 1869, 1982, 2416 |
| HpySE526I | ACGT | 9 cut(s) | 174, 232, 269, 339, 354, 402, 579, 642, 1385 |
| Hsp92I | GRCGYC | 2 cut(s) | 339, 402 |
| HspAI | GCGC | 4 cut(s) | 333, 1175, 1527, 2588 |
| KflI | GGGWCCC | 1 cut(s) | 1769 |
| Kpn2I | TCCGGA | 1 cut(s) | 2614 |
| KpnI | GGTACC | 1 cut(s) | 1267 |
| KroI | GCCGGC | 1 cut(s) | 1830 |
| KroNI | GCCGGC | 1 cut(s) | 1832 |
| Ksp22I | TGATCA | 3 cut(s) | 1482, 1678, 2242 |
| LguI | GCTCTTC | 1 cut(s) | 1116 |
| LmnI | GCTCC | 5 cut(s) | 146, 1407, 1894, 2125, 2347 |
| Lsp1109I | GCAGC | 6 cut(s) | 510, 1123, 1300, 1460, 2100, 2223 |
| LweI | GCATC | 9 cut(s) | 1135, 1546, 1558, 1712, 1740, 2188, 2197, 2448, 2591 |
| MabI | ACCWGGT | 1 cut(s) | 2042 |
| MaeI | CTAG | 2 cut(s) | 2012, 2249 |
| MaeII | ACGT | 9 cut(s) | 174, 232, 269, 339, 354, 402, 579, 642, 1385 |
| MaeIII | GTNAC | 3 cut(s) | 1294, 2033, 2379 |
| MflI | RGATCY | 4 cut(s) | 11, 69, 648, 1684 |
| MhlI | GDGCHC | 7 cut(s) | 550, 565, 793, 1412, 1669, 2179, 2352 |
| MluCI | AATT | 6 cut(s) | 31, 799, 1369, 1496, 1576, 1918 |
| MlyI | GAGTC | 2 cut(s) | 87, 381 |
| MmeI | TCCRAC | 9 cut(s) | 47, 147, 177, 240, 331, 726, 1410, 1575, 2078 |
| Mph1103I | ATGCAT | 1 cut(s) | 2402 |
| MroI | TCCGGA | 1 cut(s) | 2614 |
| MroNI | GCCGGC | 1 cut(s) | 1830 |
| MroXI | GAANNNNTTC | 1 cut(s) | 780 |
| MseI | TTAA | 6 cut(s) | 365, 936, 1077, 1347, 2283, 2433 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1589, 2196 |
| Mva1269I | GAATGC | 1 cut(s) | 870 |
| MvaI | CCWGG | 3 cut(s) | 1546, 2044, 2225 |
| MvnI | CGCG | 2 cut(s) | 335, 1177 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 330, 593, 1322, 1664 |
| NaeI | GCCGGC | 1 cut(s) | 1832 |
| NciI | CCSGG | 7 cut(s) | 56, 629, 704, 773, 1172, 1260, 1261 |
| NdeI | CATATG | 1 cut(s) | 960 |
| NgoMIV | GCCGGC | 1 cut(s) | 1830 |
| NmeAIII | GCCGAG | 1 cut(s) | 1208 |
| NmuCI | GTSAC | 2 cut(s) | 1294, 2379 |
| NsiI | ATGCAT | 1 cut(s) | 2402 |
| NspI | RCATGY | 1 cut(s) | 523 |
| NspV | TTCGAA | 1 cut(s) | 279 |
| PaeR7I | CTCGAG | 1 cut(s) | 7 |
| PagI | TCATGA | 1 cut(s) | 1648 |
| PaqCI | CACCTGC | 1 cut(s) | 231 |
| PceI | AGGCCT | 3 cut(s) | 575, 596, 2571 |
| PciSI | GCTCTTC | 1 cut(s) | 1116 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 238, 387, 556 |
| PctI | GAATGC | 1 cut(s) | 870 |
| PdiI | GCCGGC | 1 cut(s) | 1832 |
| PdmI | GAANNNNTTC | 1 cut(s) | 780 |
| PfeI | GAWTC | 9 cut(s) | 204, 609, 763, 781, 955, 1749, 1976, 2057, 2453 |
| PflFI | GACNNNGTC | 1 cut(s) | 401 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 667, 2600 |
| PfoI | TCCNGGA | 1 cut(s) | 771 |
| PkrI | GCNGC | 9 cut(s) | 140, 323, 326, 525, 1113, 1315, 1450, 2115, 2238 |
| PleI | GAGTC | 2 cut(s) | 86, 380 |
| PmaCI | CACGTG | 1 cut(s) | 270 |
| PmlI | CACGTG | 1 cut(s) | 270 |
| PpsI | GAGTC | 2 cut(s) | 86, 380 |
| Ppu21I | YACGTR | 5 cut(s) | 233, 270, 355, 580, 1386 |
| PpuMI | RGGWCCY | 1 cut(s) | 1769 |
| PshAI | GACNNNNGTC | 1 cut(s) | 458 |
| Psp124BI | GAGCTC | 2 cut(s) | 1412, 2352 |
| Psp1406I | AACGTT | 1 cut(s) | 174 |
| Psp5II | RGGWCCY | 1 cut(s) | 1769 |
| Psp6I | CCWGG | 3 cut(s) | 1544, 2042, 2223 |
| PspCI | CACGTG | 1 cut(s) | 270 |
| PspFI | CCCAGC | 2 cut(s) | 868, 1725 |
| PspGI | CCWGG | 3 cut(s) | 1544, 2042, 2223 |
| PspPI | GGNCC | 7 cut(s) | 37, 57, 301, 769, 1289, 1769, 2603 |
| PspPPI | RGGWCCY | 1 cut(s) | 1769 |
| PsuI | RGATCY | 4 cut(s) | 11, 69, 648, 1684 |
| PsyI | GACNNNGTC | 1 cut(s) | 401 |
| RsaI | GTAC | 5 cut(s) | 353, 698, 899, 1265, 1388 |
| RsaNI | GTAC | 5 cut(s) | 352, 697, 898, 1264, 1387 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1589, 2196 |
| Rsr2I | CGGWCCG | 1 cut(s) | 769 |
| RsrII | CGGWCCG | 1 cut(s) | 769 |
| SacI | GAGCTC | 2 cut(s) | 1412, 2352 |
| SapI | GCTCTTC | 1 cut(s) | 1116 |
| SaqAI | TTAA | 6 cut(s) | 365, 936, 1077, 1347, 2283, 2433 |
| SatI | GCNGC | 9 cut(s) | 139, 322, 325, 524, 1112, 1314, 1449, 2114, 2237 |
| Sau96I | GGNCC | 7 cut(s) | 37, 57, 301, 769, 1289, 1769, 2603 |
| SchI | GAGTC | 2 cut(s) | 87, 381 |
| SduI | GDGCHC | 7 cut(s) | 550, 565, 793, 1412, 1669, 2179, 2352 |
| SexAI | ACCWGGT | 1 cut(s) | 2042 |
| SfaNI | GCATC | 9 cut(s) | 1135, 1546, 1558, 1712, 1740, 2188, 2197, 2448, 2591 |
| SfcI | CTRYAG | 1 cut(s) | 856 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 593 |
| Sfr274I | CTCGAG | 1 cut(s) | 7 |
| SfuI | TTCGAA | 1 cut(s) | 279 |
| SinI | GGWCC | 6 cut(s) | 37, 301, 769, 1289, 1769, 2603 |
| SlaI | CTCGAG | 1 cut(s) | 7 |
| SmaI | CCCGGG | 1 cut(s) | 1261 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1589, 2196 |
| SmlI | CTYRAG | 3 cut(s) | 7, 685, 1688 |
| SmoI | CTYRAG | 3 cut(s) | 7, 685, 1688 |
| Sse9I | AATT | 6 cut(s) | 31, 799, 1369, 1496, 1576, 1918 |
| SseBI | AGGCCT | 3 cut(s) | 575, 596, 2571 |
| SsiI | CCGC | 5 cut(s) | 138, 321, 324, 335, 2606 |
| SspMI | CTAG | 2 cut(s) | 2012, 2249 |
| SstI | GAGCTC | 2 cut(s) | 1412, 2352 |
| StuI | AGGCCT | 3 cut(s) | 575, 596, 2571 |
| StyI | CCWWGG | 1 cut(s) | 2063 |
| TaaI | ACNGT | 7 cut(s) | 131, 545, 560, 1393, 2174, 2500, 2545 |
| TaiI | ACGT | 9 cut(s) | 177, 235, 272, 342, 357, 405, 582, 645, 1388 |
| TaqII | GACCGA | 1 cut(s) | 1900 |
| TasI | AATT | 6 cut(s) | 31, 799, 1369, 1496, 1576, 1918 |
| TauI | GCSGC | 3 cut(s) | 141, 324, 327 |
| TfiI | GAWTC | 9 cut(s) | 204, 609, 763, 781, 955, 1749, 1976, 2057, 2453 |
| Tru1I | TTAA | 6 cut(s) | 365, 936, 1077, 1347, 2283, 2433 |
| Tru9I | TTAA | 6 cut(s) | 365, 936, 1077, 1347, 2283, 2433 |
| TseFI | GTSAC | 2 cut(s) | 1294, 2379 |
| TseI | GCWGC | 6 cut(s) | 523, 1111, 1313, 1448, 2113, 2236 |
| Tsp45I | GTSAC | 2 cut(s) | 1294, 2379 |
| TspDTI | ATGAA | 8 cut(s) | 88, 866, 947, 1121, 1382, 1589, 1942, 2623 |
| TspGWI | ACGGA | 6 cut(s) | 384, 470, 729, 1503, 1523, 2451 |
| TspMI | CCCGGG | 1 cut(s) | 1259 |
| Tth111I | GACNNNGTC | 1 cut(s) | 401 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 667, 2600 |
| VneI | GTGCAC | 3 cut(s) | 546, 561, 2175 |
| VpaK11BI | GGWCC | 6 cut(s) | 37, 301, 769, 1289, 1769, 2603 |
| XapI | RAATTY | 4 cut(s) | 31, 1369, 1496, 1576 |
| XceI | RCATGY | 1 cut(s) | 523 |
| XhoI | CTCGAG | 1 cut(s) | 7 |
| XmaI | CCCGGG | 1 cut(s) | 1259 |
| XmnI | GAANNNNTTC | 1 cut(s) | 780 |
| XspI | CTAG | 2 cut(s) | 2012, 2249 |
| ZraI | GACGTC | 2 cut(s) | 340, 403 |
| Zsp2I | ATGCAT | 1 cut(s) | 2402 |