Rw4G015910

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
36391675 .. 36399076
7402 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G015910.1

Sequence Viewer

Length: 3651 bp
ATGGTAGCTGAATTTCTGCTTACTTTTGGTGTTGAGGGTGTGCTAAAGAAGGTGTCCTCACTTGTCAATGAGCAAATCAGTCTTGCATGGGGGTTCAAAGAAGATCTGAAGAAGCTAGGCGAGTCGTTATCAGTAATCCAGATCATGTTGAATGATGCGGCAGAGAAACCGCAAGCTCAAGGATGGGTGAAGAAACTAAAAGACATAGCTGATAATGCAGACAATGTGCTGGATGAATGCAACTATGAAGTTCTTCGGCGTAAGGTTGAACTGCAAAACCACATGAAGAAGAAGGTACTCAACTTTCTGTCTGCATCCACTCCCATTATATTTCACCTTAAAATGGCAAATAGGATAAAGCATATCAATGCATCACTTTTGGATCTCAAGAGTAATGCATCTCTCATTGGATTAATTGAAAGAAGAATATATGCAACTCCGCAAGGAGTACGGCCGGATAGAGATCCAACTGACTCATTTTTTGAGCCAGATGAAAAGGTCATTGGAAGGGAGGTTGTTGTGTCAAAAATTGTTGAGAGCTTGACCAACTCCACCGATCAGCAGATCAATCCTTCAGTTATGGCCATTGTGGGAATGCCGGGATTGGGAAAGACCACTTTGGCTAAATTAGTGTACCATAATCCTGCCATAGATACACACTTCCATAAAAGAATATGGGTGTGTGTATCTAACATTTTTGAAGTGAACACGATTTTAAGCCAGATGTTGGAATCTCTAAAGGGGCATAATGCAGGAATGACAAACCGAGATGCATTGCTTAAATCTCTTCAAGAAGAGCTAACAGGGAAGAGATATGTTCTTATCCTAGATGATGTTTGGAATGAAGATAGTATAAAATGGGAAAGTTTGAGGAGTTGTTTATCAAAGCTCAATTCTGCTCTGGGAAGCAACATCATCATCACTACTCGCAGTGACAAGGTGGCATCAATTTCAGAAACACTTACTCGATGTGAATTGGACAGATTATCAAATGATGAATGTTGGTCCATCTTGAAGCAAAGAGCATTGTTTTCAAATGGCAATGATCCAGACCGAGAGAGAATTGGAAACGAAATTGCTAAGAAGTGTGGAGGTGTCCCGTTAGTGGCAAAGGTTTTAGGAGGCATGATGCGTACTAAAAATAGTACAGAAGACTGGTTGTCAATTCAAGCAAGTCGAATATGGGAATTACCCGAAGGAGATGAAAGAATCATGTCTGTTTTAAAGGTGAGTTTTCAAAATTTGAAATCATCACTTTTGAAACAATGCTTTGCATATTGCTCAATGTTCCCGGAAGATTTCACAATTGAAAGAGAAAAGTTGATCCAACTATGGATGGCTCAGGGATTTCTCCATCCTTATCCTGGTCAGCATATGCAACAAATGGAGGATATAGGCAATGAGTATTTCAATATTTTATATCAAAACTCCTTATTCCAAGATGCTACCAAGGATGATGATGACATTATAAAGAACTGCAAAATACACGATCTTGTGCATGATCTTGCAAAAGAAGTATCCAAATGTGAGAGTTTGATGCAAGATTTAAATAATGTGATAGAGGATCACGATACACTTGAGATTCGACATATTTCACAAGTTCCCATTTCAACTCTAGATAGAATGTCAGAGTTAAATATTGCAAGGTTGCGCTCTCTATTTATGAGTGATCAAGTCCCTAATACCATTTTTCTAAAGTTGAGAACTTTACGTGTCTTAGATTTAGAAGAGGCGGGTATAGAGGAGTTGCCGAATTCAATTGGCAAGTTGAAGCATTTGAGGTATTTAGACATTTCCTACACAAGTATCGAGGCACTCCCAAAATCTATTGGCAAGCTCTATAACCTTCAAACACTAAGAATGCATCCTAAAAGGCATCTTGGATTAATGCATCCTTTGTATGTCATAAAGTTGCCAAAGGAAATGAAAAACTTGATCAACTTGAGACATGTTTATTTTGGTAAGGAAATTAGGATTCCAGCTAGGATATTGGGGCAATTGTCCAATCTTAGAACATTACCTTACTTCAGTGTGGGCAAGGAGATAGGACCTGGAATTGGAGAGTTGGGTGGCCTAAAGCAATTGAAAGGCCAACTAACTATTTTGAATCTAGAACATGTGAAGAGTGAAGAAGAAGCGAAGAAGGCAAAGTTGGAGGAGAAGAGAGATGTATGCGAGCTAACATTTGAATGGACAAGAGACTGGACAAGCAGCAGCATTAATGATGAACATGAACATGTACTAGAAGGCCTCCGGCCAGATTCTAATTTGCGAAGGCTGCAGATTCAAGGATTCAGGGGTGCCAGATTTCCGTCATGGGTGATGTGTCTCAACAACTTGAAGAAGATTATATTAACCGACTGCCCCAATTGTGAACGAGTTCCAGCACTGGCTCAGCTACTTAATCTTAGACATGTCATGATTAAGGGGCTGAATAACCTAAAACGTGTGGGAGCTGAAGGTCCAGACTCGTTCCCTCGTGTTGAGCACATGAGTATAACTGAATGTCCTAGCCTAGAGTCGATTCGGATCACACAGGGCATTGCTTCTCTCCGTGAATTGACCATTTGGTATTGTAATGGATTGTCAAGCCTACTGATTGGGCCCGATTGCTGCACCTCTATTCAAAAATTGGTTATTCGGGACTGTCCTAATCTAACATCACTTCCAACCACACAGGGGGACATTGCATCTCTAGAGTTGGAGATTGGAGAGTGTGATCGATTATCAAGCCTACCTAGTGGGCTCCTCCTACGCTGCACCTCTTTGAAGCTTATAGATTGTCCTAATATAACATCAATATTTCCCATCACACAGCAAATGCCATCATCTCTCCGTAAATTGTGGATTAAAAGTTGTACGGGATTATCAAGTCTACCACTGAGCGGGCTCCTCTCTCTTAAGGAGTTGTTTATATATGGCTGCTCTAGTCTAGCACCATCCATTTCAGTCCCATCAGGAGTCCTCCGCAAATTGCTTATTTGGAATTGTGAGGAATTGACATCCATTTCAGTGACGTCGTCAAGTCTTCTACTTGAGGAGTTGCGTATAGATAATTCCAGAGATACTTGCAATAATCTGCAATCTATTATTGCAGATTTACAGGGCTTCCCATGTCTCCGTCAGTTGACAATATTGGGTTGTGGGAAATTAAAATATCTGCCGACAGGGTTTCACTGCCTCACCCGATTGAAGGAACTGCATATTGGCAGGTACTGGGAGGAGCTCCATTCCTTCCCTGAGTTTCAGCTTCCACCACATTCACAACTTGAATGGTTAGACTTGAGAGGGTGGCCTAAGCTCAAGTCTCTGCCCCAGCAAATTCAGCACTTGACTTATCTAAACACTTTGTCTATACGAGAATTCAGCGGAGTGGAGGCTCTTCCTGAGTGGTTGGGAAATCTCACATCTCTTGAGAATCTGTATATTTGGAATTGTGAGAATCTCAAGTATCTACCTACACTCCAAACTATGCAACGCCTCACCAAATTGAAGAAGCTCGATGTTACGGGATGTCCCCTCCTCGAGGAAAATTGCACCAAGGACACAGGCCCTGAATGGCCCAAGATTGCTCATATCCCAACTATCGACAGCCTTCAAACAATCAGTCCAATTTTCTGCAGAAGCAAAACTGGAAAACTAGACCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1216

Amino Acids

137.8

Weight (kDa)

7.13

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 94 2.4e-17 Rx N-terminal domain
NB-ARC PF00931 173 - 342 8.3e-35 NB-ARC domain
WHD_DRP PF23559 429 - 503 7.1e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 550 - 842 2.8e-29 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 686 - 810 2e-36 R13L1/DRL21 LRRs
LRR_14 PF23598 1028 - 1181 5.6e-11 Leucine-rich repeat region
LRR_RPS2 PF23247 1035 - 1172 6.7e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_R13L1-DRL21 PF25019 1107 - 1165 1.6e-07 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1469
AatII GACGTC 1 cut(s) 3020
AbsI CCTCGAGG 1 cut(s) 3524
Acc36I ACCTGC 1 cut(s) 3201
AccB1I GGYRCC 1 cut(s) 2300
AccB7I CCANNNNNTGG 1 cut(s) 727
AccBSI CCGCTC 1 cut(s) 2886
AccI GTMKAC 1 cut(s) 2875
AciI CCGC 7 cut(s) 158, 170, 440, 1733, 2886, 2968, 3369
AclWI GGATC 6 cut(s) 390, 458, 1040, 1318, 1572, 2537
AcoI YGGCCR 3 cut(s) 452, 582, 2255
AcsI RAATTY 5 cut(s) 11, 1240, 1753, 3321, 3362
AcuI CTGAAG 4 cut(s) 128, 558, 2011, 2478
AcyI GRCGYC 1 cut(s) 3017
AfaI GTAC 8 cut(s) 297, 450, 635, 1135, 1147, 2241, 2860, 3215
AflII CTTAAG 1 cut(s) 2900
AflIII ACRYGT 6 cut(s) 1711, 1948, 2116, 2236, 2413, 2446
AhdI GACNNNNNGTC 1 cut(s) 1159
AjnI CCWGG 2 cut(s) 1363, 2050
AjuI GAANNNNNNNTTGG 6 cut(s) 486, 518, 2135, 2167, 3189, 3221
Alw21I GWGCWC 2 cut(s) 2490, 3228
Alw26I GTCTC 5 cut(s) 1939, 2193, 2333, 3122, 3312
AlwI GGATC 6 cut(s) 390, 458, 1040, 1318, 1572, 2537
AlwNI CAGNNNCTG 2 cut(s) 3216, 3554
Ama87I CYCGRG 1 cut(s) 3524
ApaI GGGCCC 1 cut(s) 2607
ApeKI GCWGC 6 cut(s) 2211, 2214, 2278, 2613, 2757, 2922
ApoI RAATTY 5 cut(s) 11, 1240, 1753, 3321, 3362
ArsI GACNNNNNNTTYG 4 cut(s) 464, 496, 3592, 3624
AseI ATTAAT 3 cut(s) 413, 1886, 2220
Asp700I GAANNNNTTC 2 cut(s) 252, 2379
AspLEI GCGC 1 cut(s) 1653
AspS9I GGNCC 7 cut(s) 1005, 2048, 2462, 2603, 2604, 3551, 3561
AsuC2I CCSGG 2 cut(s) 600, 1292
AsuHPI GGTGA 6 cut(s) 199, 326, 1240, 2332, 3175, 3475
AvaI CYCGRG 1 cut(s) 3524
AvaII GGWCC 3 cut(s) 1005, 2048, 2462
BaeGI GKGCMC 1 cut(s) 2607
BaeI ACNNNNGTAYC 2 cut(s) 1789, 1822
BalI TGGCCA 1 cut(s) 584
BanI GGYRCC 1 cut(s) 2300
BanII GRGCYC 4 cut(s) 2607, 2748, 2892, 3228
BauI CACGAG 1 cut(s) 2478
BbsI GAAGAC 2 cut(s) 1158, 3020
Bbv12I GWGCWC 2 cut(s) 2490, 3228
BbvI GCAGC 6 cut(s) 2223, 2226, 2265, 2600, 2744, 2909
BccI CCATC 8 cut(s) 177, 1016, 1330, 1362, 2816, 2833, 2947, 2962
BceAI ACGGC 1 cut(s) 467
BciT130I CCWGG 2 cut(s) 1365, 2052
BciVI GTATCC 1 cut(s) 1528
BclI TGATCA 2 cut(s) 1669, 1935
BcnI CCSGG 2 cut(s) 600, 1292
BcoDI GTCTC 5 cut(s) 1939, 2193, 2333, 3122, 3312
BfmI CTRYAG 2 cut(s) 2279, 3619
BfrI CTTAAG 1 cut(s) 2900
BfuAI ACCTGC 1 cut(s) 3201
BfuI GTATCC 1 cut(s) 1528
BglII AGATCT 1 cut(s) 103
BisI GCNGC 7 cut(s) 159, 2212, 2215, 2279, 2614, 2758, 2923
BlpI GCTNAGC 1 cut(s) 2394
BlsI GCNGC 7 cut(s) 160, 2213, 2216, 2280, 2615, 2759, 2924
Bme1390I CCNGG 4 cut(s) 600, 1292, 1365, 2052
Bme18I GGWCC 3 cut(s) 1005, 2048, 2462
BmeRI GACNNNNNGTC 1 cut(s) 1159
BmeT110I CYCGRG 1 cut(s) 3524
BmgT120I GGNCC 7 cut(s) 1005, 2048, 2462, 2603, 2604, 3551, 3561
BmiI GGNNCC 4 cut(s) 2302, 2605, 2747, 2891
BmrFI CCNGG 4 cut(s) 600, 1292, 1365, 2052
BmrI ACTGGG 1 cut(s) 3226
BmuI ACTGGG 1 cut(s) 3226
BpiI GAAGAC 2 cut(s) 1158, 3020
Bpu10I CCTNAGC 2 cut(s) 1341, 3297
Bpu1102I GCTNAGC 1 cut(s) 2394
BpuEI CTTGAG 9 cut(s) 162, 371, 1598, 1963, 3056, 3287, 3304, 3431, 3434
BpuMI CCSGG 2 cut(s) 600, 1292
Bsa29I ATCGAT 1 cut(s) 2722
BsaAI YACGTR 1 cut(s) 1712
BsaBI GATNNNNATC 2 cut(s) 462, 2528
BsaHI GRCGYC 1 cut(s) 3017
BsaJI CCNNGG 2 cut(s) 1449, 3540
BsaXI ACNNNNNCTCC 2 cut(s) 3447, 3477
Bse1I ACTGG 5 cut(s) 1160, 2207, 2394, 3221, 3637
Bse3DI GCAATG 5 cut(s) 773, 1048, 1405, 2541, 2685
Bse8I GATNNNNATC 2 cut(s) 462, 2528
BseBI CCWGG 2 cut(s) 1365, 2052
BseCI ATCGAT 1 cut(s) 2722
BseDI CCNNGG 2 cut(s) 1449, 3540
BseJI GATNNNNATC 2 cut(s) 462, 2528
BseMI GCAATG 5 cut(s) 773, 1048, 1405, 2541, 2685
BseMII CTCAG 5 cut(s) 1355, 2408, 2873, 3231, 3378
BseNI ACTGG 5 cut(s) 1160, 2207, 2394, 3221, 3637
BseRI GAGGAG 8 cut(s) 886, 1757, 2171, 2738, 2882, 3053, 3236, 3512
BseSI GKGCMC 1 cut(s) 2607
BseX3I CGGCCG 1 cut(s) 452
BseXI GCAGC 6 cut(s) 2223, 2226, 2265, 2600, 2744, 2909
BseYI CCCAGC 1 cut(s) 3315
BsgI GTGCAG 2 cut(s) 2599, 2743
Bsh1285I CGRYCG 1 cut(s) 455
BshNI GGYRCC 1 cut(s) 2300
BshVI ATCGAT 1 cut(s) 2722
BsiEI CGRYCG 1 cut(s) 455
BsiHKAI GWGCWC 2 cut(s) 2490, 3228
BsiHKCI CYCGRG 1 cut(s) 3524
BsiSI CCGG 4 cut(s) 455, 599, 1292, 2254
BslFI GGGAC 6 cut(s) 1082, 1661, 2657, 2696, 2936, 3501
BsmAI GTCTC 5 cut(s) 1939, 2193, 2333, 3122, 3312
BsmFI GGGAC 6 cut(s) 1082, 1661, 2657, 2696, 2936, 3501
BsmI GAATGC 3 cut(s) 242, 600, 1866
BsoBI CYCGRG 1 cut(s) 3524
Bsp120I GGGCCC 1 cut(s) 2603
Bsp1286I GDGCHC 5 cut(s) 2490, 2607, 2748, 2892, 3228
Bsp1720I GCTNAGC 1 cut(s) 2394
BspACI CCGC 7 cut(s) 158, 170, 440, 1733, 2886, 2968, 3369
BspCNI CTCAG 5 cut(s) 1354, 2407, 2874, 3232, 3379
BspDI ATCGAT 1 cut(s) 2722
BspHI TCATGA 1 cut(s) 2418
BspLI GGNNCC 4 cut(s) 2302, 2605, 2747, 2891
BspMAI CTGCAG 2 cut(s) 2283, 3623
BspMI ACCTGC 1 cut(s) 3201
BspPI GGATC 6 cut(s) 390, 458, 1040, 1318, 1572, 2537
BspQI GCTCTTC 2 cut(s) 789, 3387
BspT107I GGYRCC 1 cut(s) 2300
BspTI CTTAAG 1 cut(s) 2900
BsrBI CCGCTC 1 cut(s) 2886
BsrDI GCAATG 5 cut(s) 773, 1048, 1405, 2541, 2685
BsrI ACTGG 5 cut(s) 1160, 2207, 2394, 3221, 3637
BssECI CCNNGG 2 cut(s) 1449, 3540
BssNI GRCGYC 1 cut(s) 3017
BssSI CACGAG 1 cut(s) 2478
BssT1I CCWWGG 2 cut(s) 1449, 3540
Bst2BI CACGAG 1 cut(s) 2478
Bst2UI CCWGG 2 cut(s) 1365, 2052
Bst4CI ACNGT 1 cut(s) 2648
Bst6I CTCTTC 7 cut(s) 789, 792, 803, 1722, 2117, 2156, 3387
BstACI GRCGYC 1 cut(s) 3017
BstAFI CTTAAG 1 cut(s) 2900
BstBAI YACGTR 1 cut(s) 1712
BstC8I GCNNGC 4 cut(s) 174, 1835, 2177, 2888
BstENI CCTNNNNNAGG 1 cut(s) 3524
BstHHI GCGC 1 cut(s) 1653
BstMAI GTCTC 5 cut(s) 1939, 2193, 2333, 3122, 3312
BstMCI CGRYCG 1 cut(s) 455
BstMWI GCNNNNNNNGC 4 cut(s) 215, 2144, 2278, 3325
BstNI CCWGG 2 cut(s) 1365, 2052
BstNSI RCATGY 4 cut(s) 1952, 2120, 2240, 2417
BstSCI CCNGG 4 cut(s) 598, 1290, 1363, 2050
BstSFI CTRYAG 2 cut(s) 2279, 3619
BstSLI GKGCMC 1 cut(s) 2607
BstV1I GCAGC 6 cut(s) 2223, 2226, 2265, 2600, 2744, 2909
BstV2I GAAGAC 2 cut(s) 1158, 3020
BstX2I RGATCY 3 cut(s) 103, 382, 463
BstYI RGATCY 3 cut(s) 103, 382, 463
BstZI CGGCCG 1 cut(s) 452
Bsu15I ATCGAT 1 cut(s) 2722
BsuI GTATCC 1 cut(s) 1528
BsuTUI ATCGAT 1 cut(s) 2722
BtsI GCAGTG 2 cut(s) 937, 3175
BtsIMutI CAGTG 6 cut(s) 937, 2035, 2387, 2879, 3018, 3175
BveI ACCTGC 1 cut(s) 3201
Cac8I GCNNGC 4 cut(s) 174, 1835, 2177, 2888
CaiI CAGNNNCTG 2 cut(s) 3216, 3554
CciI TCATGA 1 cut(s) 2418
CfoI GCGC 1 cut(s) 1653
Cfr13I GGNCC 7 cut(s) 1005, 2048, 2462, 2603, 2604, 3551, 3561
ClaI ATCGAT 1 cut(s) 2722
Csp6I GTAC 8 cut(s) 296, 449, 634, 1134, 1146, 2240, 2859, 3214
CviQI GTAC 8 cut(s) 296, 449, 634, 1134, 1146, 2240, 2859, 3214
DraI TTTAAA 2 cut(s) 1224, 1548
DriI GACNNNNNGTC 1 cut(s) 1159
EaeI YGGCCR 3 cut(s) 452, 582, 2255
EagI CGGCCG 1 cut(s) 452
Eam1104I CTCTTC 7 cut(s) 789, 792, 803, 1722, 2117, 2156, 3387
Eam1105I GACNNNNNGTC 1 cut(s) 1159
EarI CTCTTC 7 cut(s) 789, 792, 803, 1722, 2117, 2156, 3387
Ecl136II GAGCTC 1 cut(s) 3226
EclXI CGGCCG 1 cut(s) 452
Eco130I CCWWGG 2 cut(s) 1449, 3540
Eco147I AGGCCT 1 cut(s) 2250
Eco24I GRGCYC 4 cut(s) 2607, 2748, 2892, 3228
Eco47I GGWCC 3 cut(s) 1005, 2048, 2462
Eco52I CGGCCG 1 cut(s) 452
Eco53kI GAGCTC 1 cut(s) 3226
Eco57I CTGAAG 4 cut(s) 128, 558, 2011, 2478
Eco88I CYCGRG 1 cut(s) 3524
EcoICRI GAGCTC 1 cut(s) 3226
EcoNI CCTNNNNNAGG 1 cut(s) 3524
EcoO109I RGGNCCY 2 cut(s) 2048, 3551
EcoRI GAATTC 2 cut(s) 1753, 3362
EcoRII CCWGG 2 cut(s) 1363, 2050
EcoT14I CCWWGG 2 cut(s) 1449, 3540
EcoT22I ATGCAT 5 cut(s) 373, 400, 775, 1866, 1893
EcoT38I GRGCYC 4 cut(s) 2607, 2748, 2892, 3228
ErhI CCWWGG 2 cut(s) 1449, 3540
FaqI GGGAC 6 cut(s) 1082, 1661, 2657, 2696, 2936, 3501
FauI CCCGC 2 cut(s) 1726, 2879
FauNDI CATATG 1 cut(s) 1374
FbaI TGATCA 2 cut(s) 1669, 1935
FblI GTMKAC 1 cut(s) 2875
Fnu4HI GCNGC 7 cut(s) 159, 2212, 2215, 2279, 2614, 2758, 2923
FriOI GRGCYC 4 cut(s) 2607, 2748, 2892, 3228
Fsp4HI GCNGC 7 cut(s) 159, 2212, 2215, 2279, 2614, 2758, 2923
GlaI GCGC 1 cut(s) 1652
GluI GCNGC 7 cut(s) 159, 2212, 2215, 2279, 2614, 2758, 2923
GsaI CCCAGC 1 cut(s) 3319
HapII CCGG 4 cut(s) 455, 599, 1292, 2254
HhaI GCGC 1 cut(s) 1653
Hin1I GRCGYC 1 cut(s) 3017
Hin6I GCGC 1 cut(s) 1651
HinP1I GCGC 1 cut(s) 1651
HincII GTYRAC 1 cut(s) 3129
HindII GTYRAC 1 cut(s) 3129
HindIII AAGCTT 1 cut(s) 2771
HpaII CCGG 4 cut(s) 455, 599, 1292, 2254
HphI GGTGA 6 cut(s) 199, 326, 1240, 2332, 3175, 3475
Hpy166II GTNNAC 5 cut(s) 634, 706, 2375, 2876, 3129
Hpy188I TCNGA 4 cut(s) 108, 955, 1630, 2529
Hpy8I GTNNAC 5 cut(s) 634, 706, 2375, 2876, 3129
Hpy99I CGWCG 1 cut(s) 3022
HpyCH4III ACNGT 1 cut(s) 2648
HpyCH4IV ACGT 3 cut(s) 1711, 2446, 3017
HpyF10VI GCNNNNNNNGC 4 cut(s) 215, 2144, 2278, 3325
HpySE526I ACGT 3 cut(s) 1711, 2446, 3017
Hsp92I GRCGYC 1 cut(s) 3017
HspAI GCGC 1 cut(s) 1651
Ksp22I TGATCA 2 cut(s) 1669, 1935
LguI GCTCTTC 2 cut(s) 789, 3387
LmnI GCTCC 5 cut(s) 2453, 2751, 2895, 3223, 3231
Lsp1109I GCAGC 6 cut(s) 2223, 2226, 2265, 2600, 2744, 2909
MaeII ACGT 3 cut(s) 1711, 2446, 3017
MaeIII GTNAC 3 cut(s) 932, 3013, 3505
MbiI CCGCTC 1 cut(s) 2886
MfeI CAATTG 5 cut(s) 1305, 1758, 1997, 2081, 2368
MflI RGATCY 3 cut(s) 103, 382, 463
MhlI GDGCHC 5 cut(s) 2490, 2607, 2748, 2892, 3228
MlsI TGGCCA 1 cut(s) 584
MluNI TGGCCA 1 cut(s) 584
MlyI GAGTC 5 cut(s) 131, 467, 2462, 2528, 2970
MmeI TCCRAC 6 cut(s) 491, 708, 1351, 2133, 2682, 2693
Mox20I TGGCCA 1 cut(s) 584
Mph1103I ATGCAT 5 cut(s) 373, 400, 775, 1866, 1893
MroXI GAANNNNTTC 2 cut(s) 252, 2379
MscI TGGCCA 1 cut(s) 584
MslI CAYNNNNRTG 4 cut(s) 366, 2188, 2235, 3011
Msp20I TGGCCA 1 cut(s) 584
MspA1I CMGCKG 1 cut(s) 3369
MspCI CTTAAG 1 cut(s) 2900
MspI CCGG 4 cut(s) 455, 599, 1292, 2254
MspR9I CCNGG 4 cut(s) 600, 1292, 1365, 2052
MunI CAATTG 5 cut(s) 1305, 1758, 1997, 2081, 2368
Mva1269I GAATGC 3 cut(s) 242, 600, 1866
MvaI CCWGG 2 cut(s) 1365, 2052
MwoI GCNNNNNNNGC 4 cut(s) 215, 2144, 2278, 3325
NciI CCSGG 2 cut(s) 600, 1292
NdeI CATATG 1 cut(s) 1374
NlaIV GGNNCC 4 cut(s) 2302, 2605, 2747, 2891
NmuCI GTSAC 2 cut(s) 932, 3013
NsiI ATGCAT 5 cut(s) 373, 400, 775, 1866, 1893
NspI RCATGY 4 cut(s) 1952, 2120, 2240, 2417
PaeR7I CTCGAG 1 cut(s) 3524
PagI TCATGA 1 cut(s) 2418
PceI AGGCCT 1 cut(s) 2250
PciI ACATGT 4 cut(s) 1948, 2116, 2236, 2413
PciSI GCTCTTC 2 cut(s) 789, 3387
PctI GAATGC 3 cut(s) 242, 600, 1866
PdmI GAANNNNTTC 2 cut(s) 252, 2379
PflFI GACNNNGTC 1 cut(s) 3019
PflMI CCANNNNNTGG 1 cut(s) 727
PfoI TCCNGGA 1 cut(s) 1290
PkrI GCNGC 7 cut(s) 160, 2213, 2216, 2280, 2615, 2759, 2924
PleI GAGTC 5 cut(s) 130, 467, 2462, 2527, 2969
PpsI GAGTC 5 cut(s) 130, 467, 2462, 2527, 2969
Ppu21I YACGTR 1 cut(s) 1712
PpuMI RGGWCCY 1 cut(s) 2048
PscI ACATGT 4 cut(s) 1948, 2116, 2236, 2413
PshBI ATTAAT 3 cut(s) 413, 1886, 2220
PsiI TTATAA 1 cut(s) 1469
Psp124BI GAGCTC 1 cut(s) 3228
Psp5II RGGWCCY 1 cut(s) 2048
Psp6I CCWGG 2 cut(s) 1363, 2050
PspFI CCCAGC 1 cut(s) 3315
PspGI CCWGG 2 cut(s) 1363, 2050
PspN4I GGNNCC 4 cut(s) 2302, 2605, 2747, 2891
PspOMI GGGCCC 1 cut(s) 2603
PspPI GGNCC 7 cut(s) 1005, 2048, 2462, 2603, 2604, 3551, 3561
PspPPI RGGWCCY 1 cut(s) 2048
PspXI VCTCGAGB 1 cut(s) 3524
PstI CTGCAG 2 cut(s) 2283, 3623
PstNI CAGNNNCTG 2 cut(s) 3216, 3554
PsuI RGATCY 3 cut(s) 103, 382, 463
PsyI GACNNNGTC 1 cut(s) 3019
RsaI GTAC 8 cut(s) 297, 450, 635, 1135, 1147, 2241, 2860, 3215
RsaNI GTAC 8 cut(s) 296, 449, 634, 1134, 1146, 2240, 2859, 3214
RseI CAYNNNNRTG 4 cut(s) 366, 2188, 2235, 3011
SacI GAGCTC 1 cut(s) 3228
SapI GCTCTTC 2 cut(s) 789, 3387
SatI GCNGC 7 cut(s) 159, 2212, 2215, 2279, 2614, 2758, 2923
Sau96I GGNCC 7 cut(s) 1005, 2048, 2462, 2603, 2604, 3551, 3561
SchI GAGTC 5 cut(s) 131, 467, 2462, 2528, 2970
ScrFI CCNGG 4 cut(s) 600, 1292, 1365, 2052
SduI GDGCHC 5 cut(s) 2490, 2607, 2748, 2892, 3228
SfcI CTRYAG 2 cut(s) 2279, 3619
Sfr274I CTCGAG 1 cut(s) 3524
SinI GGWCC 3 cut(s) 1005, 2048, 2462
SlaI CTCGAG 1 cut(s) 3524
SmiI ATTTAAAT 1 cut(s) 1548
SmiMI CAYNNNNRTG 4 cut(s) 366, 2188, 2235, 3011
SseBI AGGCCT 1 cut(s) 2250
SsiI CCGC 7 cut(s) 158, 170, 440, 1733, 2886, 2968, 3369
SspI AATATT 4 cut(s) 1414, 1639, 2802, 3135
SstI GAGCTC 1 cut(s) 3228
StuI AGGCCT 1 cut(s) 2250
StyD4I CCNGG 4 cut(s) 598, 1290, 1363, 2050
StyI CCWWGG 2 cut(s) 1449, 3540
SwaI ATTTAAAT 1 cut(s) 1548
TaaI ACNGT 1 cut(s) 2648
TaiI ACGT 3 cut(s) 1714, 2449, 3020
TaqI TCGA 9 cut(s) 967, 1177, 1585, 1809, 2522, 2722, 3501, 3525, 3588
TaqII GACCGA 1 cut(s) 1068
TatI WGTACW 2 cut(s) 1145, 2239
TauI GCSGC 1 cut(s) 161
TscAI CASTG 6 cut(s) 937, 2035, 2394, 2886, 3018, 3182
TseFI GTSAC 2 cut(s) 932, 3013
TseI GCWGC 6 cut(s) 2211, 2214, 2278, 2613, 2757, 2922
Tsp45I GTSAC 2 cut(s) 932, 3013
TspGWI ACGGA 4 cut(s) 2301, 2543, 2825, 3110
TspRI CASTG 6 cut(s) 937, 2035, 2394, 2886, 3018, 3182
Tth111I GACNNNGTC 1 cut(s) 3019
Van91I CCANNNNNTGG 1 cut(s) 727
Vha464I CTTAAG 1 cut(s) 2900
VpaK11BI GGWCC 3 cut(s) 1005, 2048, 2462
VspI ATTAAT 3 cut(s) 413, 1886, 2220
XagI CCTNNNNNAGG 1 cut(s) 3524
XapI RAATTY 5 cut(s) 11, 1240, 1753, 3321, 3362
XbaI TCTAGA 3 cut(s) 1615, 2110, 2695
XceI RCATGY 4 cut(s) 1952, 2120, 2240, 2417
XcmI CCANNNNNNNNNTGG 1 cut(s) 1361
XhoI CTCGAG 1 cut(s) 3524
XmiI GTMKAC 1 cut(s) 2875
XmnI GAANNNNTTC 2 cut(s) 252, 2379
ZraI GACGTC 1 cut(s) 3018
Zsp2I ATGCAT 5 cut(s) 373, 400, 775, 1866, 1893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.