disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 13 - 100 | 3.2e-20 | Rx N-terminal domain |
| NB-ARC | PF00931 | 180 - 350 | 8e-35 | NB-ARC domain |
| AAA_22 | PF13401 | 199 - 311 | 1.9e-06 | AAA domain |
| WHD_DRP | PF23559 | 437 - 510 | 9.2e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 520 - 777 | 2.1e-24 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 645 - 769 | 1.2e-33 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 975 - 1179 | 7.6e-07 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 1120 - 1256 | 2.7e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 1174 - 1258 | 1.5e-07 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1190 - 1254 | 5.2e-08 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1749, 2570, 3387 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2670 |
| Acc16I | TGCGCA | 1 cut(s) | 2785 |
| Acc36I | ACCTGC | 1 cut(s) | 1761 |
| Acc65I | GGTACC | 1 cut(s) | 3109 |
| AccB1I | GGYRCC | 1 cut(s) | 3109 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2095, 2264, 3322 |
| AccBSI | CCGCTC | 1 cut(s) | 3801 |
| AccI | GTMKAC | 1 cut(s) | 3400 |
| AccII | CGCG | 2 cut(s) | 794, 2386 |
| AccIII | TCCGGA | 1 cut(s) | 3031 |
| AciI | CCGC | 9 cut(s) | 1822, 2386, 2586, 2803, 3361, 3716, 3763, 3801, 3841 |
| AclWI | GGATC | 4 cut(s) | 210, 752, 2335, 2377 |
| AcoI | YGGCCR | 2 cut(s) | 2266, 3812 |
| AdeI | CACNNNGTG | 3 cut(s) | 2095, 2921, 3625 |
| AflII | CTTAAG | 2 cut(s) | 128, 1904 |
| AflIII | ACRYGT | 4 cut(s) | 1534, 1618, 2044, 3395 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1972 |
| AjnI | CCWGG | 3 cut(s) | 619, 1927, 3504 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2012, 2044, 3447, 3479 |
| Alw21I | GWGCWC | 3 cut(s) | 2536, 3244, 3486 |
| Alw26I | GTCTC | 8 cut(s) | 83, 476, 1079, 2495, 2930, 3289, 3320, 3564 |
| Alw44I | GTGCAC | 1 cut(s) | 3240 |
| AlwI | GGATC | 4 cut(s) | 210, 752, 2335, 2377 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1928, 2437 |
| Ama87I | CYCGRG | 1 cut(s) | 2492 |
| Aor13HI | TCCGGA | 1 cut(s) | 3031 |
| ApaI | GGGCCC | 1 cut(s) | 2431 |
| ApaLI | GTGCAC | 1 cut(s) | 3240 |
| AseI | ATTAAT | 1 cut(s) | 912 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 311, 395, 981, 1788, 3573 |
| Asp718I | GGTACC | 1 cut(s) | 3109 |
| AspLEI | GCGC | 5 cut(s) | 1161, 2130, 2386, 2458, 2786 |
| AspS9I | GGNCC | 7 cut(s) | 413, 1925, 2427, 2428, 3251, 3670, 3803 |
| AsuC2I | CCSGG | 1 cut(s) | 3051 |
| AsuII | TTCGAA | 1 cut(s) | 2018 |
| AsuNHI | GCTAGC | 1 cut(s) | 2200 |
| AvaI | CYCGRG | 1 cut(s) | 2492 |
| AvaII | GGWCC | 2 cut(s) | 1925, 3670 |
| AxyI | CCTNAGG | 1 cut(s) | 3105 |
| BaeGI | GKGCMC | 3 cut(s) | 2431, 3104, 3244 |
| BalI | TGGCCA | 2 cut(s) | 2268, 3814 |
| BanI | GGYRCC | 1 cut(s) | 3109 |
| BanII | GRGCYC | 2 cut(s) | 2431, 3486 |
| BbsI | GAAGAC | 1 cut(s) | 216 |
| Bbv12I | GWGCWC | 3 cut(s) | 2536, 3244, 3486 |
| BbvCI | CCTCAGC | 1 cut(s) | 30 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1287, 1321 |
| BciT130I | CCWGG | 3 cut(s) | 621, 1929, 3506 |
| BciVI | GTATCC | 1 cut(s) | 718 |
| BclI | TGATCA | 1 cut(s) | 1812 |
| BcnI | CCSGG | 1 cut(s) | 3051 |
| BcoDI | GTCTC | 8 cut(s) | 83, 476, 1079, 2495, 2930, 3289, 3320, 3564 |
| BfmI | CTRYAG | 1 cut(s) | 2475 |
| BfoI | RGCGCY | 1 cut(s) | 2459 |
| BfrI | CTTAAG | 2 cut(s) | 128, 1904 |
| BfuAI | ACCTGC | 1 cut(s) | 1761 |
| BfuI | GTATCC | 1 cut(s) | 718 |
| BmcAI | AGTACT | 3 cut(s) | 471, 2262, 2777 |
| Bme1390I | CCNGG | 4 cut(s) | 621, 1929, 3051, 3506 |
| Bme18I | GGWCC | 2 cut(s) | 1925, 3670 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1972 |
| BmeT110I | CYCGRG | 1 cut(s) | 2492 |
| BmgT120I | GGNCC | 7 cut(s) | 413, 1925, 2427, 2428, 3251, 3670, 3803 |
| BmiI | GGNNCC | 2 cut(s) | 2429, 3111 |
| BmrFI | CCNGG | 4 cut(s) | 621, 1929, 3051, 3506 |
| BmrI | ACTGGG | 2 cut(s) | 2252, 2532 |
| BmtI | GCTAGC | 1 cut(s) | 2204 |
| BmuI | ACTGGG | 2 cut(s) | 2252, 2532 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3027 |
| BpiI | GAAGAC | 1 cut(s) | 216 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 473, 505 |
| BpmI | CTGGAG | 2 cut(s) | 475, 3344 |
| Bpu10I | CCTNAGC | 3 cut(s) | 30, 1365, 3549 |
| Bpu14I | TTCGAA | 1 cut(s) | 2018 |
| BpuEI | CTTGAG | 9 cut(s) | 51, 441, 548, 757, 906, 1705, 2540, 3539, 3686 |
| BpuMI | CCSGG | 1 cut(s) | 3051 |
| BsaAI | YACGTR | 1 cut(s) | 1619 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3755 |
| BsaI | GGTCTC | 2 cut(s) | 476, 2930 |
| BsaJI | CCNNGG | 4 cut(s) | 45, 1585, 1793, 2359 |
| BsaWI | WCCGGW | 2 cut(s) | 1887, 3031 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2244, 2274, 2518, 2548 |
| Bse1I | ACTGG | 6 cut(s) | 1052, 1957, 1992, 2258, 2538, 3025 |
| Bse21I | CCTNAGG | 1 cut(s) | 3105 |
| Bse3DI | GCAATG | 2 cut(s) | 333, 2411 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3755 |
| BseAI | TCCGGA | 1 cut(s) | 3031 |
| BseBI | CCWGG | 3 cut(s) | 621, 1929, 3506 |
| BseDI | CCNNGG | 4 cut(s) | 45, 1585, 1793, 2359 |
| BseJI | GATNNNNATC | 1 cut(s) | 3755 |
| BseMI | GCAATG | 2 cut(s) | 333, 2411 |
| BseMII | CTCAG | 5 cut(s) | 21, 1379, 2322, 2656, 2839 |
| BseNI | ACTGG | 6 cut(s) | 1052, 1957, 1992, 2258, 2538, 3025 |
| BseRI | GAGGAG | 5 cut(s) | 907, 1424, 2510, 3494, 3809 |
| BseSI | GKGCMC | 3 cut(s) | 2431, 3104, 3244 |
| BseYI | CCCAGC | 1 cut(s) | 3496 |
| BsgI | GTGCAG | 1 cut(s) | 3454 |
| Bsh1236I | CGCG | 2 cut(s) | 794, 2386 |
| BshNI | GGYRCC | 1 cut(s) | 3109 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2536, 3244, 3486 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2492 |
| BsiSI | CCGG | 4 cut(s) | 1888, 2678, 3032, 3050 |
| BslFI | GGGAC | 3 cut(s) | 2240, 2676, 3753 |
| BsmAI | GTCTC | 8 cut(s) | 83, 476, 1079, 2495, 2930, 3289, 3320, 3564 |
| BsmBI | CGTCTC | 1 cut(s) | 3289 |
| BsmFI | GGGAC | 3 cut(s) | 2240, 2676, 3753 |
| BsmI | GAATGC | 3 cut(s) | 621, 1025, 3491 |
| Bso31I | GGTCTC | 2 cut(s) | 476, 2930 |
| BsoBI | CYCGRG | 1 cut(s) | 2492 |
| Bsp119I | TTCGAA | 1 cut(s) | 2018 |
| Bsp120I | GGGCCC | 1 cut(s) | 2427 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2431, 2536, 3104, 3244, 3486 |
| Bsp13I | TCCGGA | 1 cut(s) | 3031 |
| BspACI | CCGC | 9 cut(s) | 1822, 2386, 2586, 2803, 3361, 3716, 3763, 3801, 3841 |
| BspCNI | CTCAG | 5 cut(s) | 22, 1378, 2323, 2655, 2838 |
| BspEI | TCCGGA | 1 cut(s) | 3031 |
| BspFNI | CGCG | 2 cut(s) | 794, 2386 |
| BspHI | TCATGA | 2 cut(s) | 658, 685 |
| BspLI | GGNNCC | 2 cut(s) | 2429, 3111 |
| BspMI | ACCTGC | 1 cut(s) | 1761 |
| BspOI | GCTAGC | 1 cut(s) | 2204 |
| BspPI | GGATC | 4 cut(s) | 210, 752, 2335, 2377 |
| BspT104I | TTCGAA | 1 cut(s) | 2018 |
| BspT107I | GGYRCC | 1 cut(s) | 3109 |
| BspTI | CTTAAG | 2 cut(s) | 128, 1904 |
| BspTNI | GGTCTC | 2 cut(s) | 476, 2930 |
| BsrBI | CCGCTC | 1 cut(s) | 3801 |
| BsrDI | GCAATG | 2 cut(s) | 333, 2411 |
| BsrI | ACTGG | 6 cut(s) | 1052, 1957, 1992, 2258, 2538, 3025 |
| BssECI | CCNNGG | 4 cut(s) | 45, 1585, 1793, 2359 |
| BssT1I | CCWWGG | 3 cut(s) | 45, 1585, 1793 |
| Bst2UI | CCWGG | 3 cut(s) | 621, 1929, 3506 |
| Bst4CI | ACNGT | 5 cut(s) | 1875, 2360, 2479, 2921, 3068 |
| Bst6I | CTCTTC | 5 cut(s) | 810, 987, 3144, 3183, 3294 |
| BstAFI | CTTAAG | 2 cut(s) | 128, 1904 |
| BstBAI | YACGTR | 1 cut(s) | 1619 |
| BstBI | TTCGAA | 1 cut(s) | 2018 |
| BstC8I | GCNNGC | 7 cut(s) | 60, 412, 1025, 2126, 2202, 2594, 2996 |
| BstDSI | CCRYGG | 1 cut(s) | 2359 |
| BstFNI | CGCG | 2 cut(s) | 794, 2386 |
| BstH2I | RGCGCY | 1 cut(s) | 2459 |
| BstHHI | GCGC | 5 cut(s) | 1161, 2130, 2386, 2458, 2786 |
| BstMAI | GTCTC | 8 cut(s) | 83, 476, 1079, 2495, 2930, 3289, 3320, 3564 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 501, 2021, 2080, 3497, 3506 |
| BstNI | CCWGG | 3 cut(s) | 621, 1929, 3506 |
| BstNSI | RCATGY | 4 cut(s) | 1538, 2048, 2596, 3399 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3027 |
| BstSCI | CCNGG | 4 cut(s) | 619, 1927, 3049, 3504 |
| BstSFI | CTRYAG | 1 cut(s) | 2475 |
| BstSLI | GKGCMC | 3 cut(s) | 2431, 3104, 3244 |
| BstUI | CGCG | 2 cut(s) | 794, 2386 |
| BstV2I | GAAGAC | 1 cut(s) | 216 |
| BstX2I | RGATCY | 3 cut(s) | 202, 744, 2327 |
| BstYI | RGATCY | 3 cut(s) | 202, 744, 2327 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3105 |
| BsuI | GTATCC | 1 cut(s) | 718 |
| BtgI | CCRYGG | 1 cut(s) | 2359 |
| BtgZI | GCGATG | 3 cut(s) | 519, 3110, 3189 |
| BtsI | GCAGTG | 1 cut(s) | 2735 |
| BtsIMutI | CAGTG | 3 cut(s) | 2484, 2735, 3032 |
| BveI | ACCTGC | 1 cut(s) | 1761 |
| Cac8I | GCNNGC | 7 cut(s) | 60, 412, 1025, 2126, 2202, 2594, 2996 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1928, 2437 |
| CciI | TCATGA | 2 cut(s) | 658, 685 |
| CfoI | GCGC | 5 cut(s) | 1161, 2130, 2386, 2458, 2786 |
| Cfr13I | GGNCC | 7 cut(s) | 413, 1925, 2427, 2428, 3251, 3670, 3803 |
| CseI | GACGC | 2 cut(s) | 276, 800 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 700, 735 |
| DraI | TTTAAA | 3 cut(s) | 1194, 1432, 1953 |
| DraIII | CACNNNGTG | 3 cut(s) | 2095, 2921, 3625 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2670 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1972 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2670 |
| EaeI | YGGCCR | 2 cut(s) | 2266, 3812 |
| Eam1104I | CTCTTC | 5 cut(s) | 810, 987, 3144, 3183, 3294 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1972 |
| EarI | CTCTTC | 5 cut(s) | 810, 987, 3144, 3183, 3294 |
| Ecl136II | GAGCTC | 1 cut(s) | 3484 |
| Eco130I | CCWWGG | 3 cut(s) | 45, 1585, 1793 |
| Eco147I | AGGCCT | 2 cut(s) | 2124, 2994 |
| Eco24I | GRGCYC | 2 cut(s) | 2431, 3486 |
| Eco31I | GGTCTC | 2 cut(s) | 476, 2930 |
| Eco47I | GGWCC | 2 cut(s) | 1925, 3670 |
| Eco53kI | GAGCTC | 1 cut(s) | 3484 |
| Eco81I | CCTNAGG | 1 cut(s) | 3105 |
| Eco88I | CYCGRG | 1 cut(s) | 2492 |
| EcoICRI | GAGCTC | 1 cut(s) | 3484 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1925, 3670 |
| EcoRI | GAATTC | 1 cut(s) | 71 |
| EcoRII | CCWGG | 3 cut(s) | 619, 1927, 3504 |
| EcoT14I | CCWWGG | 3 cut(s) | 45, 1585, 1793 |
| EcoT22I | ATGCAT | 1 cut(s) | 3493 |
| EcoT38I | GRGCYC | 2 cut(s) | 2431, 3486 |
| ErhI | CCWWGG | 3 cut(s) | 45, 1585, 1793 |
| Esp3I | CGTCTC | 1 cut(s) | 3289 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 719, 751, 1328, 1360 |
| FaqI | GGGAC | 3 cut(s) | 2240, 2676, 3753 |
| FauI | CCCGC | 1 cut(s) | 3770 |
| FbaI | TGATCA | 1 cut(s) | 1812 |
| FblI | GTMKAC | 1 cut(s) | 3400 |
| FriOI | GRGCYC | 2 cut(s) | 2431, 3486 |
| FspI | TGCGCA | 1 cut(s) | 2785 |
| GlaI | GCGC | 5 cut(s) | 1160, 2129, 2385, 2457, 2785 |
| GsaI | CCCAGC | 1 cut(s) | 3500 |
| GsuI | CTGGAG | 2 cut(s) | 475, 3344 |
| HaeII | RGCGCY | 1 cut(s) | 2459 |
| HapII | CCGG | 4 cut(s) | 1888, 2678, 3032, 3050 |
| HgaI | GACGC | 2 cut(s) | 276, 800 |
| HhaI | GCGC | 5 cut(s) | 1161, 2130, 2386, 2458, 2786 |
| Hin6I | GCGC | 5 cut(s) | 1159, 2128, 2384, 2456, 2784 |
| HinP1I | GCGC | 5 cut(s) | 1159, 2128, 2384, 2456, 2784 |
| HincII | GTYRAC | 6 cut(s) | 157, 906, 1742, 1878, 2356, 2742 |
| HindII | GTYRAC | 6 cut(s) | 157, 906, 1742, 1878, 2356, 2742 |
| HindIII | AAGCTT | 2 cut(s) | 2013, 2072 |
| HpaI | GTTAAC | 3 cut(s) | 906, 2356, 2742 |
| HpaII | CCGG | 4 cut(s) | 1888, 2678, 3032, 3050 |
| Hpy99I | CGWCG | 1 cut(s) | 270 |
| HpyCH4III | ACNGT | 5 cut(s) | 1875, 2360, 2479, 2921, 3068 |
| HpyCH4IV | ACGT | 3 cut(s) | 1464, 1618, 2873 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 501, 2021, 2080, 3497, 3506 |
| HpySE526I | ACGT | 3 cut(s) | 1464, 1618, 2873 |
| HspAI | GCGC | 5 cut(s) | 1159, 2128, 2384, 2456, 2784 |
| Kpn2I | TCCGGA | 1 cut(s) | 3031 |
| KpnI | GGTACC | 1 cut(s) | 3113 |
| Ksp22I | TGATCA | 1 cut(s) | 1812 |
| KspAI | GTTAAC | 3 cut(s) | 906, 2356, 2742 |
| LmnI | GCTCC | 6 cut(s) | 1590, 2468, 2497, 2539, 3213, 3481 |
| MaeII | ACGT | 3 cut(s) | 1464, 1618, 2873 |
| MbiI | CCGCTC | 1 cut(s) | 3801 |
| MfeI | CAATTG | 3 cut(s) | 1089, 1665, 3123 |
| MflI | RGATCY | 3 cut(s) | 202, 744, 2327 |
| MhlI | GDGCHC | 5 cut(s) | 2431, 2536, 3104, 3244, 3486 |
| MlsI | TGGCCA | 2 cut(s) | 2268, 3814 |
| MluNI | TGGCCA | 2 cut(s) | 2268, 3814 |
| MlyI | GAGTC | 6 cut(s) | 113, 1069, 2262, 3167, 3437, 3703 |
| MmeI | TCCRAC | 3 cut(s) | 289, 1375, 2559 |
| Mox20I | TGGCCA | 2 cut(s) | 2268, 3814 |
| Mph1103I | ATGCAT | 1 cut(s) | 3493 |
| MroI | TCCGGA | 1 cut(s) | 3031 |
| MroXI | GAANNNNTTC | 5 cut(s) | 311, 395, 981, 1788, 3573 |
| MscI | TGGCCA | 2 cut(s) | 2268, 3814 |
| MslI | CAYNNNNRTG | 2 cut(s) | 576, 684 |
| Msp20I | TGGCCA | 2 cut(s) | 2268, 3814 |
| MspA1I | CMGCKG | 4 cut(s) | 112, 410, 3765, 3843 |
| MspCI | CTTAAG | 2 cut(s) | 128, 1904 |
| MspI | CCGG | 4 cut(s) | 1888, 2678, 3032, 3050 |
| MspR9I | CCNGG | 4 cut(s) | 621, 1929, 3051, 3506 |
| MssI | GTTTAAAC | 1 cut(s) | 1953 |
| MunI | CAATTG | 3 cut(s) | 1089, 1665, 3123 |
| Mva1269I | GAATGC | 3 cut(s) | 621, 1025, 3491 |
| MvaI | CCWGG | 3 cut(s) | 621, 1929, 3506 |
| MvnI | CGCG | 2 cut(s) | 794, 2386 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 501, 2021, 2080, 3497, 3506 |
| NciI | CCSGG | 1 cut(s) | 3051 |
| NheI | GCTAGC | 1 cut(s) | 2200 |
| NlaIV | GGNNCC | 2 cut(s) | 2429, 3111 |
| NmuCI | GTSAC | 8 cut(s) | 16, 49, 116, 567, 677, 940, 953, 2885 |
| NsbI | TGCGCA | 1 cut(s) | 2785 |
| NsiI | ATGCAT | 1 cut(s) | 3493 |
| NspI | RCATGY | 4 cut(s) | 1538, 2048, 2596, 3399 |
| NspV | TTCGAA | 1 cut(s) | 2018 |
| PaeI | GCATGC | 1 cut(s) | 2596 |
| PaeR7I | CTCGAG | 1 cut(s) | 2492 |
| PagI | TCATGA | 2 cut(s) | 658, 685 |
| PceI | AGGCCT | 2 cut(s) | 2124, 2994 |
| PciI | ACATGT | 3 cut(s) | 1534, 2044, 3395 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3428 |
| PctI | GAATGC | 3 cut(s) | 621, 1025, 3491 |
| PdmI | GAANNNNTTC | 5 cut(s) | 311, 395, 981, 1788, 3573 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2095, 2264, 3322 |
| PfoI | TCCNGGA | 1 cut(s) | 1927 |
| PleI | GAGTC | 6 cut(s) | 113, 1068, 2261, 3167, 3436, 3702 |
| PmeI | GTTTAAAC | 1 cut(s) | 1953 |
| PpsI | GAGTC | 6 cut(s) | 113, 1068, 2261, 3167, 3436, 3702 |
| Ppu21I | YACGTR | 1 cut(s) | 1619 |
| PpuMI | RGGWCCY | 2 cut(s) | 1925, 3670 |
| PscI | ACATGT | 3 cut(s) | 1534, 2044, 3395 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3027 |
| PshBI | ATTAAT | 1 cut(s) | 912 |
| PsiI | TTATAA | 3 cut(s) | 1749, 2570, 3387 |
| Psp124BI | GAGCTC | 1 cut(s) | 3486 |
| Psp5II | RGGWCCY | 2 cut(s) | 1925, 3670 |
| Psp6I | CCWGG | 3 cut(s) | 619, 1927, 3504 |
| PspFI | CCCAGC | 1 cut(s) | 3496 |
| PspGI | CCWGG | 3 cut(s) | 619, 1927, 3504 |
| PspN4I | GGNNCC | 2 cut(s) | 2429, 3111 |
| PspOMI | GGGCCC | 1 cut(s) | 2427 |
| PspPI | GGNCC | 7 cut(s) | 413, 1925, 2427, 2428, 3251, 3670, 3803 |
| PspPPI | RGGWCCY | 2 cut(s) | 1925, 3670 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1928, 2437 |
| PsuI | RGATCY | 3 cut(s) | 202, 744, 2327 |
| PvuII | CAGCTG | 2 cut(s) | 112, 410 |
| RseI | CAYNNNNRTG | 2 cut(s) | 576, 684 |
| SacI | GAGCTC | 1 cut(s) | 3486 |
| Sau96I | GGNCC | 7 cut(s) | 413, 1925, 2427, 2428, 3251, 3670, 3803 |
| ScaI | AGTACT | 3 cut(s) | 471, 2262, 2777 |
| SchI | GAGTC | 6 cut(s) | 113, 1069, 2262, 3167, 3437, 3703 |
| ScrFI | CCNGG | 4 cut(s) | 621, 1929, 3051, 3506 |
| SduI | GDGCHC | 5 cut(s) | 2431, 2536, 3104, 3244, 3486 |
| SfcI | CTRYAG | 1 cut(s) | 2475 |
| Sfr274I | CTCGAG | 1 cut(s) | 2492 |
| SfuI | TTCGAA | 1 cut(s) | 2018 |
| SinI | GGWCC | 2 cut(s) | 1925, 3670 |
| SlaI | CTCGAG | 1 cut(s) | 2492 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 576, 684 |
| SphI | GCATGC | 1 cut(s) | 2596 |
| SseBI | AGGCCT | 2 cut(s) | 2124, 2994 |
| SsiI | CCGC | 9 cut(s) | 1822, 2386, 2586, 2803, 3361, 3716, 3763, 3801, 3841 |
| SspI | AATATT | 1 cut(s) | 1866 |
| SstI | GAGCTC | 1 cut(s) | 3486 |
| StuI | AGGCCT | 2 cut(s) | 2124, 2994 |
| StyD4I | CCNGG | 4 cut(s) | 619, 1927, 3049, 3504 |
| StyI | CCWWGG | 3 cut(s) | 45, 1585, 1793 |
| TaaI | ACNGT | 5 cut(s) | 1875, 2360, 2479, 2921, 3068 |
| TaiI | ACGT | 3 cut(s) | 1467, 1621, 2876 |
| TaqI | TCGA | 9 cut(s) | 172, 811, 1307, 2018, 2034, 2442, 2493, 3147, 3486 |
| TaqII | GACCGA | 1 cut(s) | 972 |
| TatI | WGTACW | 6 cut(s) | 469, 778, 2113, 2260, 2775, 2898 |
| TauI | GCSGC | 3 cut(s) | 1825, 2389, 3804 |
| TscAI | CASTG | 3 cut(s) | 2484, 2735, 3032 |
| TseFI | GTSAC | 8 cut(s) | 16, 49, 116, 567, 677, 940, 953, 2885 |
| Tsp45I | GTSAC | 8 cut(s) | 16, 49, 116, 567, 677, 940, 953, 2885 |
| TspGWI | ACGGA | 2 cut(s) | 3636, 3806 |
| TspRI | CASTG | 3 cut(s) | 2484, 2735, 3032 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2095, 2264, 3322 |
| Vha464I | CTTAAG | 2 cut(s) | 128, 1904 |
| VneI | GTGCAC | 1 cut(s) | 3240 |
| VpaK11BI | GGWCC | 2 cut(s) | 1925, 3670 |
| VspI | ATTAAT | 1 cut(s) | 912 |
| XbaI | TCTAGA | 3 cut(s) | 2893, 3169, 3775 |
| XceI | RCATGY | 4 cut(s) | 1538, 2048, 2596, 3399 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2357 |
| XhoI | CTCGAG | 1 cut(s) | 2492 |
| XmiI | GTMKAC | 1 cut(s) | 3400 |
| XmnI | GAANNNNTTC | 5 cut(s) | 311, 395, 981, 1788, 3573 |
| ZrmI | AGTACT | 3 cut(s) | 471, 2262, 2777 |
| Zsp2I | ATGCAT | 1 cut(s) | 3493 |