pycom07g02280

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
1839741 .. 1843729
3989 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g02280.2

Sequence Viewer

Length: 3885 bp
ATGTTGTCTTCTAAGAATGGGGCAAATGAATGGTCAGCAATTCTAGACAGTAAAATATGGGACTCTCCAGAAGCAGAAGAGATGATCATCTCAGGATTGAAGTTGAGTCTGGATAATTTGAAATTCCCAATTTTGAAACAATGCTTCACTTATTGCTCAATGTTCAAGAAAGGCCTTGAAATTGAAAGGGATGACCTAATCCAACTATGGATGGCTCAAGGATTGCTTCACTCTTCTTCCGAGAATAGTGATCTAGAGATGGAGGATATAGGCATGGAGTATTTTCATATTTTGTTGCAAAACTCCTTACTTCAATTTTTTGGATCGATCTTACGAAGGATGACTTTGGTGTTGTTGCCAAATGCAAGATGCACGTTCTTGTGCATGATTTTGCAGAACTTGTATCAAAATCTGAGAGCGCGACTTCAAATTCTAATGAGATGTGAAGTTCCTAGTAACATGTTGCCAAGGTTTAGGGGTTTACATGTATTGAATCTTTACAATGCTGATATTAAGGAGCTGCCGAAATCAATTGAGAAGCTGAAGCAATTGAGGTATTTAAACGTTTCTAGAACAGAGATCAAAGCAATCCCCAAATCTGTCGGCAAGCTCCATAACTTACAGACATTAAGAATGGAGTATTGTAGACTGCTGAAGATGTTTCCTAAGGAAATCGGAGATTTGATCAACTTGAGACACATCTATTTTGGTCCTGTCCAAAAAAAGAAACGTGCTAATTTTGGTTGGTACAGGGAAACTCATGTTGGGGTCGGGCAATTGACTAATCTTCGAAAGATGCCTTATTTTATTGTGAGTCCTAATGGAATCGGTTGTGGAATTGAGGAATTGGCTGGCTTAAACCACTTGAAAGATGAACTGGCTATTTATGATTTGGAACATGTGAGGGATGGAGAAGAAGCGAAGAAATCAAATTTAGTTGAAAAGAGAAACATACGAAAGTTATCACTTGTATGGGGTGAGGAAATGAGGCCACGCAACAGCAGTGAAGAAGGTGTCCTCCAAGGCCTCCAGCCACACCCAAATTTGGAAATTTTAGAGATTTACAATTTCATGGGTGCTAAATTTCCATATTGGAAGCCACACAACAACTTGAAAAAAATTCAATTAATTCAGTGCGACATATGTGAAGAAGCCCCCATGCTTGGCCATCTACCTAGTCTTATGCATCTTGAGTTTAATACAATGTGTAATCTAAAACGTTTGGGAGATGAGTTTTATGGCTATGATGACGTTGATGATGCAATGAAGACCAAGGCTTTGTATCCTGCATTGAAGACGTTCAGAATTAGTGCGGCCCCAAATTTGATCGAATGGATTGAACCACCGGTGGTGAAAGAAAATCAAATATCGGTGTTTCCTCGCCTTGAGGAGTTGGATCTCGTGGAGTGTCCACAAATGAGAAACTTTCCTGATCATTTTGCATGCCTTCGTAAGTTGGATATGAGCATTTGTCACGAGCTGTCAAACCTAACAAGTCTGGTAGAAAAGTGTACCTCTCTTAAGAATCTGGAAATAAGCAACTGCGACAAACTTAGATCCCTTTCATTATTTGGATTGACATCCATCCAGAAATTGTTATTTAGTTCACGTGGTGGTAAATTAACATCAACGAGCCTGCATAGTGGACCAGAATTGTACGGCCGAGTTTCTCTTAAGGAGTTGTCCATAAAATGTCCACATCTTGAAAATTTGGAAATAAGTTGCTGCAGTAGTCTGATGTCCATTTCAATTCACGGTGCAACGTCCCTTCGAGGATTGAAGATTAGTTCATGTGGTGGATTAAGATTAATGGACCTGCAAAGTCTACCAGAATGCTATACCCCTCTACAGGTGTTGTCTTTAAGGTCGTGCAAAAGTCTGGAGTCAATTTCAGGTTTACACGAATGCACATCCTTTCGTGAATTGATCATTGAAGATTGTGATGGACTAAAAACTTGTGTATCGAGTGGGCTTGAATCTTGTACTTCTATCCGTGCGCTGCGTGTCCACGATTATCAACAATTGGGGCAGTATTCAAGTTATGGGGTAGACATGTCTCTTATTGAGGAGCTGACCATTTATAACTGCCCTAAGCTAATAAGCATTTCAAATCACGGTCTGACGACCCTTCGGAAACTGGTACTTATTGCAAGTTATGTACTGGAATTGTCTATCGTCAGTAGTACTACAGTGGAGGAGTTGTATATACAGGATTGTACATCCCTTGGTTCACTGTGTATCGACAATTGTGAAAGGCTGAGGCATGTTTCGGTTGACGGGCTAGAAACACTCATTATTCTTGAGGAGTTGACTATAAGGAATTGTCCTAGTCTAACATCCATTTCAATCGCAGCATGTCTCAGGGAATTGGTGATTGAGGGTTGTGAGAAGCTTTCGAGCTTGCCGAGCGGGTTGAAACATTGCAACGCACTTGAGAGATTGAAAATAAGTGGTAGCCGAAACTTGGTATCCATTCCAATTTCAGATGTATTCCCGCCATCCCTTGGGCAATTTGTAATTGAAGATTGTGCTCAACTATCAAGCCTGCCAGGCCATCACGAGTCTCTTGAGGAGTTGAATATAGTGAATTGCCCTATGCTAAGATGGAGTTCAGTTGCCGATGAGGGGAGGAGTCTGACCGCCCTCCGGAGATTGGTGATTGAGGGTTGTGAGAAGCTTTCAAGCTTGCCGAGTGGGTTGAAACATTGCAACGCACTAGAGAGATTGAAAATAAGTGGTAGCCGAAACTTGGTATCCATTCCAATTTCAGATGTACTCCCGCCATCCCTTGGGCAATTTGTAATTGAAGATTGTGCTCAACTATCAAGCCTGCCAGGCCGTCATGAATCTCTTGAGGAGTTGAGTATAGTGAATTGCCCGATGCTAAGATGGAGTTCCGTTGCCGATGAGGGGAGGAGTCTGACCGCCCTCCGGAGATTGGTTATTGCAAGTTGCAGCGGACCAGAATTGAACATTGACTCTATCAGCACTCTTGAGGAGATTTCTTTACACGATTGCACATCCCTTGGCAAACTGAGAATACAGGATTGTCAGAATTTAAAGGCTCTTCCCAGTTTAGACAACCTCACATCCCTCGGTTATTTGGGTGTTATGGGATGTGATGGATTGACAGGTCTGCCGAGTGGGCTCTCATCCTGCACATCTCTTGTCCACTTGGAAATTCGAAGGTGCAAAAATTTTGTATCTCTGGCAGATGTCGACGTAACTAGCTTGCAATCTCTTTCCCGTTTAGCAATATGGCATTGTGCGAAATTACAATACTTGCCGACGGGTCTACGTACTCTGACTAGTTTGAATGGCTTGTATATTGGTGGATTCTGGAAGGAGCTCGATTCTTTCCCAGTTTCGCAAATTCCATCATCACACAAATTAGAATTTTGCGGGTGGCCTAAGCTCAAGTCTCTGCCTCAAGTAATTAATCACTCCACCAGTCCAGTAACAGAGTTAGGAATAGATGATTGCGATGGGCTGGAGACTCTTCCAGAGTGGTTGGGTGACATTACATCTCTCGACCGACTATATATTTACAATTGCAAGAATCTCAAGTCTCTGCCTTCCGCCCAAGCTATGCAACGCCTCACCAAACTAGAATATCTACGGATTGCTATGTGTCCCTTTCTGAAGAAAGCATGCGCCAGGGGTACCGGCAGAGAGTGGCCCAAGATTTCTCATATTCCAAATATCACAAGTAATTCCTTCTCTCTCAAAACAAATAATTCATTCGTTCAATTCTCCTTCTCTCACGTTTCTTATTCAGTATTGCGTATTGACCAAACCTCTTTTTTTGTCAGTTATTTGATTAAGATGAGGATGAAGATTCAATATTGGCCTGAGATTCCTCACATTCTAAACGTCAGTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1295

Amino Acids

145.5

Weight (kDa)

6.82

Isoelectric Point (pI)

54.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2082
Acc36I ACCTGC 1 cut(s) 1824
Acc65I GGTACC 1 cut(s) 3662
AccB1I GGYRCC 1 cut(s) 3662
AccB7I CCANNNNNTGG 2 cut(s) 2504, 2789
AccBSI CCGCTC 1 cut(s) 2409
AccI GTMKAC 5 cut(s) 646, 1825, 2049, 3219, 3295
AccII CGCG 1 cut(s) 421
AccIII TCCGGA 2 cut(s) 2646, 2931
AciI CCGC 9 cut(s) 1313, 2409, 2495, 2640, 2780, 2925, 2958, 3402, 3579
AclI AACGTT 2 cut(s) 564, 1219
AclWI GGATC 3 cut(s) 331, 1404, 1551
AcoI YGGCCR 2 cut(s) 1165, 1660
AcuI CTGAAG 3 cut(s) 563, 674, 3662
AcvI CACGTG 1 cut(s) 1610
AdeI CACNNNGTG 1 cut(s) 1613
AflII CTTAAG 2 cut(s) 1520, 1673
AflIII ACRYGT 4 cut(s) 459, 484, 898, 2052
AgeI ACCGGT 1 cut(s) 1345
AhlI ACTAGT 1 cut(s) 3308
AjnI CCWGG 3 cut(s) 2548, 2833, 3656
AjuI GAANNNNNNNTTGG 2 cut(s) 747, 779
Alw21I GWGCWC 3 cut(s) 2533, 2818, 3351
Alw26I GTCTC 7 cut(s) 688, 2061, 2363, 2568, 3426, 3488, 3573
AlwI GGATC 3 cut(s) 331, 1404, 1551
Aor13HI TCCGGA 2 cut(s) 2646, 2931
ApeKI GCWGC 5 cut(s) 520, 1725, 1999, 2351, 2955
ArsI GACNNNNNNTTYG 4 cut(s) 17, 49, 1261, 1293
AseI ATTAAT 3 cut(s) 1127, 1808, 3438
AsiGI ACCGGT 1 cut(s) 1345
Asp700I GAANNNNTTC 1 cut(s) 1298
Asp718I GGTACC 1 cut(s) 3662
AspLEI GCGC 3 cut(s) 421, 1999, 3656
AspS9I GGNCC 6 cut(s) 710, 1315, 1646, 1813, 2960, 3678
AsuHPI GGTGA 6 cut(s) 989, 1363, 2383, 2668, 3527, 3592
AsuII TTCGAA 2 cut(s) 790, 3184
AvaII GGWCC 4 cut(s) 710, 1646, 1813, 2960
AxyI CCTNAGG 1 cut(s) 666
BaeI ACNNNNGTAYC 2 cut(s) 1944, 1977
BalI TGGCCA 1 cut(s) 1167
BanI GGYRCC 1 cut(s) 3662
BanII GRGCYC 2 cut(s) 3150, 3351
BauI CACGAG 3 cut(s) 1400, 1475, 2558
BbrPI CACGTG 1 cut(s) 1610
BbsI GAAGAC 2 cut(s) 1274, 1301
Bbv12I GWGCWC 3 cut(s) 2533, 2818, 3351
BbvCI CCTCAGC 1 cut(s) 2258
BbvI GCAGC 5 cut(s) 507, 1712, 1986, 2363, 2967
BceAI ACGGC 2 cut(s) 1675, 2823
BciT130I CCWGG 3 cut(s) 2550, 2835, 3658
BciVI GTATCC 3 cut(s) 1293, 2479, 2764
BclI TGATCA 4 cut(s) 84, 684, 1432, 1926
BcoDI GTCTC 7 cut(s) 688, 2061, 2363, 2568, 3426, 3488, 3573
BcuI ACTAGT 1 cut(s) 3308
BfmI CTRYAG 3 cut(s) 1726, 1847, 2187
BfrI CTTAAG 2 cut(s) 1520, 1673
BfuAI ACCTGC 1 cut(s) 1824
BfuI GTATCC 3 cut(s) 1293, 2479, 2764
BglI GCCNNNNNGGC 3 cut(s) 2550, 2835, 3145
BisI GCNGC 6 cut(s) 521, 1314, 1726, 2000, 2352, 2956
BlsI GCNGC 6 cut(s) 522, 1315, 1727, 2001, 2353, 2957
BmcAI AGTACT 1 cut(s) 2185
Bme1390I CCNGG 3 cut(s) 2550, 2835, 3658
Bme18I GGWCC 4 cut(s) 710, 1646, 1813, 2960
BmgT120I GGNCC 6 cut(s) 710, 1315, 1646, 1813, 2960, 3678
BmiI GGNNCC 2 cut(s) 1317, 3664
BmrFI CCNGG 3 cut(s) 2550, 2835, 3658
BmrI ACTGGG 2 cut(s) 3066, 3356
BmsI GCATC 5 cut(s) 359, 786, 1195, 1249, 2871
BmuI ACTGGG 2 cut(s) 3066, 3356
BpiI GAAGAC 2 cut(s) 1274, 1301
BpmI CTGGAG 4 cut(s) 51, 1013, 1901, 3512
Bpu10I CCTNAGC 3 cut(s) 2091, 2258, 3411
Bpu14I TTCGAA 2 cut(s) 790, 3184
Bsa29I ATCGAT 1 cut(s) 326
BsaAI YACGTR 2 cut(s) 1610, 3299
BsaBI GATNNNNATC 2 cut(s) 86, 1579
BsaJI CCNNGG 9 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025, 3094, 3657
BsaWI WCCGGW 3 cut(s) 1345, 2646, 2931
BsaXI ACNNNNNCTCC 2 cut(s) 2186, 2216
Bse118I RCCGGY 2 cut(s) 1345, 3665
Bse1I ACTGG 7 cut(s) 882, 2142, 2166, 3072, 3362, 3450, 3455
Bse21I CCTNAGG 1 cut(s) 666
Bse3DI GCAATG 3 cut(s) 1269, 2419, 2704
Bse8I GATNNNNATC 2 cut(s) 86, 1579
BseAI TCCGGA 2 cut(s) 2646, 2931
BseBI CCWGG 3 cut(s) 2550, 2835, 3658
BseCI ATCGAT 1 cut(s) 326
BseDI CCNNGG 9 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025, 3094, 3657
BseJI GATNNNNATC 2 cut(s) 86, 1579
BseMI GCAATG 3 cut(s) 1269, 2419, 2704
BseMII CTCAG 6 cut(s) 105, 404, 2249, 2374, 3026, 3843
BseNI ACTGG 7 cut(s) 882, 2142, 2166, 3072, 3362, 3450, 3455
BseRI GAGGAG 9 cut(s) 1403, 2081, 2210, 2318, 2585, 2644, 2870, 2929, 3011
BseX3I CGGCCG 1 cut(s) 1660
BseXI GCAGC 5 cut(s) 507, 1712, 1986, 2363, 2967
BsgI GTGCAG 1 cut(s) 3142
Bsh1236I CGCG 1 cut(s) 421
Bsh1285I CGRYCG 2 cut(s) 1663, 3535
BshNI GGYRCC 1 cut(s) 3662
BshTI ACCGGT 1 cut(s) 1345
BshVI ATCGAT 1 cut(s) 326
BsiEI CGRYCG 2 cut(s) 1663, 3535
BsiHKAI GWGCWC 3 cut(s) 2533, 2818, 3351
BsiSI CCGG 4 cut(s) 1346, 2647, 2932, 3666
BslFI GGGAC 3 cut(s) 74, 1750, 3618
BsmAI GTCTC 7 cut(s) 688, 2061, 2363, 2568, 3426, 3488, 3573
BsmFI GGGAC 3 cut(s) 74, 1750, 3618
BsmI GAATGC 2 cut(s) 1838, 1910
Bsp119I TTCGAA 2 cut(s) 790, 3184
Bsp1286I GDGCHC 4 cut(s) 2533, 2818, 3150, 3351
Bsp13I TCCGGA 2 cut(s) 2646, 2931
Bsp1407I TGTACA 1 cut(s) 2216
BspACI CCGC 9 cut(s) 1313, 2409, 2495, 2640, 2780, 2925, 2958, 3402, 3579
BspCNI CTCAG 6 cut(s) 104, 405, 2250, 2373, 3027, 3844
BspDI ATCGAT 1 cut(s) 326
BspEI TCCGGA 2 cut(s) 2646, 2931
BspFNI CGCG 1 cut(s) 421
BspHI TCATGA 1 cut(s) 2842
BspLI GGNNCC 2 cut(s) 1317, 3664
BspMAI CTGCAG 1 cut(s) 1730
BspMI ACCTGC 1 cut(s) 1824
BspPI GGATC 3 cut(s) 331, 1404, 1551
BspQI GCTCTTC 1 cut(s) 3072
BspT104I TTCGAA 2 cut(s) 790, 3184
BspT107I GGYRCC 1 cut(s) 3662
BspTI CTTAAG 2 cut(s) 1520, 1673
BsrBI CCGCTC 1 cut(s) 2409
BsrDI GCAATG 3 cut(s) 1269, 2419, 2704
BsrFI RCCGGY 2 cut(s) 1345, 3665
BsrGI TGTACA 1 cut(s) 2216
BsrI ACTGG 7 cut(s) 882, 2142, 2166, 3072, 3362, 3450, 3455
BssAI RCCGGY 2 cut(s) 1345, 3665
BssECI CCNNGG 9 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025, 3094, 3657
BssSI CACGAG 3 cut(s) 1400, 1475, 2558
BssT1I CCWWGG 7 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025
Bst2BI CACGAG 3 cut(s) 1400, 1475, 2558
Bst2UI CCWGG 3 cut(s) 2550, 2835, 3658
Bst4CI ACNGT 5 cut(s) 50, 1757, 2117, 2191, 2235
Bst6I CTCTTC 4 cut(s) 72, 238, 3072, 3504
BstAFI CTTAAG 2 cut(s) 1520, 1673
BstAUI TGTACA 1 cut(s) 2216
BstBAI YACGTR 2 cut(s) 1610, 3299
BstBI TTCGAA 2 cut(s) 790, 3184
BstFNI CGCG 1 cut(s) 421
BstHHI GCGC 3 cut(s) 421, 1999, 3656
BstMAI GTCTC 7 cut(s) 688, 2061, 2363, 2568, 3426, 3488, 3573
BstMCI CGRYCG 2 cut(s) 1663, 3535
BstMWI GCNNNNNNNGC 4 cut(s) 2406, 2550, 2835, 3145
BstNI CCWGG 3 cut(s) 2550, 2835, 3658
BstNSI RCATGY 8 cut(s) 463, 488, 902, 1446, 2056, 2267, 2358, 3654
BstSCI CCNGG 3 cut(s) 2548, 2833, 3656
BstSFI CTRYAG 3 cut(s) 1726, 1847, 2187
BstSNI TACGTA 1 cut(s) 3299
BstUI CGCG 1 cut(s) 421
BstV1I GCAGC 5 cut(s) 507, 1712, 1986, 2363, 2967
BstV2I GAAGAC 2 cut(s) 1274, 1301
BstX2I RGATCY 2 cut(s) 1396, 1556
BstYI RGATCY 2 cut(s) 1396, 1556
BstZI CGGCCG 1 cut(s) 1660
Bsu15I ATCGAT 1 cut(s) 326
Bsu36I CCTNAGG 1 cut(s) 666
BsuI GTATCC 3 cut(s) 1293, 2479, 2764
BsuTUI ATCGAT 1 cut(s) 326
BtgZI GCGATG 1 cut(s) 3498
BtsI GCAGTG 1 cut(s) 1009
BtsIMutI CAGTG 4 cut(s) 1009, 1139, 2196, 2231
BveI ACCTGC 1 cut(s) 1824
CciI TCATGA 1 cut(s) 2842
CfoI GCGC 3 cut(s) 421, 1999, 3656
Cfr10I RCCGGY 2 cut(s) 1345, 3665
Cfr13I GGNCC 6 cut(s) 710, 1315, 1646, 1813, 2960, 3678
ClaI ATCGAT 1 cut(s) 326
CspAI ACCGGT 1 cut(s) 1345
DraI TTTAAA 2 cut(s) 561, 3060
DraIII CACNNNGTG 1 cut(s) 1613
EaeI YGGCCR 2 cut(s) 1165, 1660
EagI CGGCCG 1 cut(s) 1660
Eam1104I CTCTTC 4 cut(s) 72, 238, 3072, 3504
EarI CTCTTC 4 cut(s) 72, 238, 3072, 3504
EciI GGCGGA 1 cut(s) 3568
Ecl136II GAGCTC 1 cut(s) 3349
EclXI CGGCCG 1 cut(s) 1660
Eco105I TACGTA 1 cut(s) 3299
Eco130I CCWWGG 7 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025
Eco147I AGGCCT 2 cut(s) 174, 1026
Eco24I GRGCYC 2 cut(s) 3150, 3351
Eco47I GGWCC 4 cut(s) 710, 1646, 1813, 2960
Eco52I CGGCCG 1 cut(s) 1660
Eco53kI GAGCTC 1 cut(s) 3349
Eco57I CTGAAG 3 cut(s) 563, 674, 3662
Eco72I CACGTG 1 cut(s) 1610
Eco81I CCTNAGG 1 cut(s) 666
EcoICRI GAGCTC 1 cut(s) 3349
EcoRII CCWGG 3 cut(s) 2548, 2833, 3656
EcoT14I CCWWGG 7 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025
EcoT22I ATGCAT 1 cut(s) 1188
EcoT38I GRGCYC 2 cut(s) 3150, 3351
ErhI CCWWGG 7 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025
FalI AAGNNNNNCTT 4 cut(s) 210, 242, 328, 360
FaqI GGGAC 3 cut(s) 74, 1750, 3618
FauI CCCGC 4 cut(s) 2402, 2502, 2787, 3395
FauNDI CATATG 1 cut(s) 1142
FbaI TGATCA 4 cut(s) 84, 684, 1432, 1926
FblI GTMKAC 5 cut(s) 646, 1825, 2049, 3219, 3295
Fnu4HI GCNGC 6 cut(s) 521, 1314, 1726, 2000, 2352, 2956
FriOI GRGCYC 2 cut(s) 3150, 3351
Fsp4HI GCNGC 6 cut(s) 521, 1314, 1726, 2000, 2352, 2956
GlaI GCGC 3 cut(s) 420, 1998, 3655
GluI GCNGC 6 cut(s) 521, 1314, 1726, 2000, 2352, 2956
GsuI CTGGAG 4 cut(s) 51, 1013, 1901, 3512
HapII CCGG 4 cut(s) 1346, 2647, 2932, 3666
HhaI GCGC 3 cut(s) 421, 1999, 3656
Hin6I GCGC 3 cut(s) 419, 1997, 3654
HinP1I GCGC 3 cut(s) 419, 1997, 3654
HincII GTYRAC 3 cut(s) 2275, 2310, 3220
HindII GTYRAC 3 cut(s) 2275, 2310, 3220
HindIII AAGCTT 3 cut(s) 2390, 2675, 2683
HpaII CCGG 4 cut(s) 1346, 2647, 2932, 3666
HphI GGTGA 6 cut(s) 989, 1363, 2383, 2668, 3527, 3592
Hpy99I CGWCG 2 cut(s) 3224, 3292
HpyCH4III ACNGT 5 cut(s) 50, 1757, 2117, 2191, 2235
HpyF10VI GCNNNNNNNGC 4 cut(s) 2406, 2550, 2835, 3145
HspAI GCGC 3 cut(s) 419, 1997, 3654
Kpn2I TCCGGA 2 cut(s) 2646, 2931
KpnI GGTACC 1 cut(s) 3666
Ksp22I TGATCA 4 cut(s) 84, 684, 1432, 1926
LguI GCTCTTC 1 cut(s) 3072
LmnI GCTCC 4 cut(s) 517, 615, 2068, 3346
Lsp1109I GCAGC 5 cut(s) 507, 1712, 1986, 2363, 2967
LweI GCATC 5 cut(s) 359, 786, 1195, 1249, 2871
MaeIII GTNAC 5 cut(s) 455, 1472, 3223, 3457, 3515
MbiI CCGCTC 1 cut(s) 2409
MfeI CAATTG 6 cut(s) 531, 548, 776, 2021, 2245, 3550
MflI RGATCY 2 cut(s) 1396, 1556
MhlI GDGCHC 4 cut(s) 2533, 2818, 3150, 3351
MlsI TGGCCA 1 cut(s) 1167
MluNI TGGCCA 1 cut(s) 1167
MlyI GAGTC 9 cut(s) 56, 115, 823, 1892, 2570, 2641, 2926, 2972, 3490
MmeI TCCRAC 3 cut(s) 226, 1374, 1437
Mox20I TGGCCA 1 cut(s) 1167
Mph1103I ATGCAT 1 cut(s) 1188
MroI TCCGGA 2 cut(s) 2646, 2931
MroXI GAANNNNTTC 1 cut(s) 1298
MscI TGGCCA 1 cut(s) 1167
MslI CAYNNNNRTG 1 cut(s) 970
Msp20I TGGCCA 1 cut(s) 1167
MspA1I CMGCKG 1 cut(s) 2958
MspCI CTTAAG 2 cut(s) 1520, 1673
MspI CCGG 4 cut(s) 1346, 2647, 2932, 3666
MspR9I CCNGG 3 cut(s) 2550, 2835, 3658
MunI CAATTG 6 cut(s) 531, 548, 776, 2021, 2245, 3550
Mva1269I GAATGC 2 cut(s) 1838, 1910
MvaI CCWGG 3 cut(s) 2550, 2835, 3658
MvnI CGCG 1 cut(s) 421
MwoI GCNNNNNNNGC 4 cut(s) 2406, 2550, 2835, 3145
NdeI CATATG 1 cut(s) 1142
NlaIV GGNNCC 2 cut(s) 1317, 3664
NmeAIII GCCGAG 4 cut(s) 1688, 2430, 2715, 3165
NmuCI GTSAC 2 cut(s) 1472, 3515
NsiI ATGCAT 1 cut(s) 1188
NspI RCATGY 8 cut(s) 463, 488, 902, 1446, 2056, 2267, 2358, 3654
NspV TTCGAA 2 cut(s) 790, 3184
PaeI GCATGC 2 cut(s) 1446, 3654
PagI TCATGA 1 cut(s) 2842
PceI AGGCCT 2 cut(s) 174, 1026
PciI ACATGT 4 cut(s) 459, 484, 898, 2052
PciSI GCTCTTC 1 cut(s) 3072
PcsI WCGNNNNNNNCGW 1 cut(s) 2402
PctI GAATGC 2 cut(s) 1838, 1910
PdmI GAANNNNTTC 1 cut(s) 1298
PflMI CCANNNNNTGG 2 cut(s) 2504, 2789
PinAI ACCGGT 1 cut(s) 1345
PkrI GCNGC 6 cut(s) 522, 1315, 1727, 2001, 2353, 2957
PleI GAGTC 9 cut(s) 56, 114, 822, 1891, 2569, 2640, 2925, 2972, 3490
PmaCI CACGTG 1 cut(s) 1610
PmlI CACGTG 1 cut(s) 1610
PpsI GAGTC 9 cut(s) 56, 114, 822, 1891, 2569, 2640, 2925, 2972, 3490
Ppu21I YACGTR 2 cut(s) 1610, 3299
PscI ACATGT 4 cut(s) 459, 484, 898, 2052
PshBI ATTAAT 3 cut(s) 1127, 1808, 3438
PsiI TTATAA 1 cut(s) 2082
Psp124BI GAGCTC 1 cut(s) 3351
Psp1406I AACGTT 2 cut(s) 564, 1219
Psp6I CCWGG 3 cut(s) 2548, 2833, 3656
PspCI CACGTG 1 cut(s) 1610
PspGI CCWGG 3 cut(s) 2548, 2833, 3656
PspN4I GGNNCC 2 cut(s) 1317, 3664
PspPI GGNCC 6 cut(s) 710, 1315, 1646, 1813, 2960, 3678
PstI CTGCAG 1 cut(s) 1730
PsuI RGATCY 2 cut(s) 1396, 1556
RseI CAYNNNNRTG 1 cut(s) 970
SacI GAGCTC 1 cut(s) 3351
SalI GTCGAC 1 cut(s) 3218
SapI GCTCTTC 1 cut(s) 3072
SatI GCNGC 6 cut(s) 521, 1314, 1726, 2000, 2352, 2956
Sau96I GGNCC 6 cut(s) 710, 1315, 1646, 1813, 2960, 3678
ScaI AGTACT 1 cut(s) 2185
SchI GAGTC 9 cut(s) 56, 115, 823, 1892, 2570, 2641, 2926, 2972, 3490
ScrFI CCNGG 3 cut(s) 2550, 2835, 3658
SduI GDGCHC 4 cut(s) 2533, 2818, 3150, 3351
SfaNI GCATC 5 cut(s) 359, 786, 1195, 1249, 2871
SfcI CTRYAG 3 cut(s) 1726, 1847, 2187
SfuI TTCGAA 2 cut(s) 790, 3184
SgrAI CRCCGGYG 1 cut(s) 1345
SinI GGWCC 4 cut(s) 710, 1646, 1813, 2960
SmiMI CAYNNNNRTG 1 cut(s) 970
SnaBI TACGTA 1 cut(s) 3299
SpeI ACTAGT 1 cut(s) 3308
SphI GCATGC 2 cut(s) 1446, 3654
SseBI AGGCCT 2 cut(s) 174, 1026
SsiI CCGC 9 cut(s) 1313, 2409, 2495, 2640, 2780, 2925, 2958, 3402, 3579
SspI AATATT 1 cut(s) 3845
SstI GAGCTC 1 cut(s) 3351
StuI AGGCCT 2 cut(s) 174, 1026
StyD4I CCNGG 3 cut(s) 2548, 2833, 3656
StyI CCWWGG 7 cut(s) 467, 1021, 1272, 2224, 2503, 2788, 3025
TaaI ACNGT 5 cut(s) 50, 1757, 2117, 2191, 2235
TaqII GACCGA 1 cut(s) 3549
TatI WGTACW 5 cut(s) 1982, 2158, 2183, 2216, 2773
TauI GCSGC 1 cut(s) 1316
TscAI CASTG 4 cut(s) 1009, 1139, 2196, 2238
TseFI GTSAC 2 cut(s) 1472, 3515
TseI GCWGC 5 cut(s) 520, 1725, 1999, 2351, 2955
Tsp45I GTSAC 2 cut(s) 1472, 3515
TspGWI ACGGA 3 cut(s) 1982, 2887, 3634
TspRI CASTG 4 cut(s) 1009, 1139, 2196, 2238
Van91I CCANNNNNTGG 2 cut(s) 2504, 2789
Vha464I CTTAAG 2 cut(s) 1520, 1673
VpaK11BI GGWCC 4 cut(s) 710, 1646, 1813, 2960
VspI ATTAAT 3 cut(s) 1127, 1808, 3438
XbaI TCTAGA 3 cut(s) 43, 253, 569
XceI RCATGY 8 cut(s) 463, 488, 902, 1446, 2056, 2267, 2358, 3654
XmiI GTMKAC 5 cut(s) 646, 1825, 2049, 3219, 3295
XmnI GAANNNNTTC 1 cut(s) 1298
ZrmI AGTACT 1 cut(s) 2185
Zsp2I ATGCAT 1 cut(s) 1188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.