Rmu_sc0000935.1_g000024

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000935.1
Physical Location & Seq
Forward (+)
121676 .. 125089
3414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000935.1_g000024.1.cds

Sequence Viewer

Length: 3141 bp
atgcctgtactctctgtccttactcccgttgctggaggagtagtgagtaaggtggctttacttgctactgatcagttgagactcgatatcatctgggggttccgcaaagagataaataagctcaaacaatcctcaattctgattggaaatataatccatgatgctgctcacgaacctgaagctagggatctgcgggcaagggccgagtggatgaagaggctgataagcgtagcttatgatgcagaagatatcctggatgaattacaatatgaagttcagcgtatcgttataaaggagacaagcctggataagaagatactcggtttcttctgcaacaatcctgctgtatttcgtctcaagatggcacgcaagatttacaacatcaacacatccttggatgatctctacaagcaagcaggtggcgtgggactggtcagatcaaatggaggggcagcagccagtcaaggtatgcaggacagggaaacaacctcattctttgagaaaaatgaattcaccttcaaagatgcaatcactattggaagggatcaggttgtgtcaaatataattgcaaccttgaccaactccaacaatcaaaaaaatattctttcggtgatggccattgtgggattgggaggcctaggcaaaacaactttggctcgcttaattaccaaccaactgaaagaaggtgaaatagaaaaacactttgatacaacgctctgggtgtacgtatctaatacttttgatgtcaattcaattttatggcgaatgctggaatcatgtgacgcgccgggggcaaatctttcaagtcgggaagtattgattggaagcctccgccataagttgaaagagaaaaggtattttcttgtacttgatgacgtttggaatgaggatgctaataattggaatgatttgaagagttgtttgttgcaactaaattctgccaaaggaagctctgtgattgtcaccacccgtagatccaatgttgcatcaatcatggaaacacttcctaggtggaatttagaaactttatcggatgatgaatgttggtccatattgaaggatagagcacttgcagatcctaatgctcccattgcttcagaactagaggaaattggaagggaaattgccaaaaagtgtgctggtcttccattggcggcaaaggttttgggaagcttgatgcattctaagaatagtatggaggaatggttgtcaattctaaaaagtcaaatatggcagttatcatccgacaatgaggatagcaggatcatgtcgattttgaagttgagttttgacaatttgaaatcaccactagaacaatgttttgcatattgctccatgttcaggagaggttactcaattgaaaaggatatgttgatccaactatggatggctcaaggttttctccatccttctcatggtccccaaaccaagcaattgattgaaatggaggatataggcaataagtattttgagactctattggagaactccttgtttcaagctacagagtatggggatgactgtggtgttatcatcaccagattcaagatgcatgatcttgtgcatgatcttgcaaacgaagtatccaagtgtgagagcttgacaccagactacactcatgagaaggatgatcatgatatacttattcgacatattgcacggattcctactccaacactagaagaaatgtcaaaaataagtatttcaaaattgcgaacactctttttggatgaccgtgtctctaataccattttccaaaagcttacaactttacatgtcttgagtttagcaggttatcatattgcgaatttgccaaatttacttggcaagctgaagcaattgaggtatctagatctttcctatacagcaattagaacactcccaaagtctattggcaagctctataacctccaaacattgagattacctctccatcttgaaaagtgtccaaaggagattcaaaatttgatcaacttgaggtatttttattttggtgagttcatgaaatttacggctgaagttttggtgcggttaactaacctccgaacattgtcttccttcaatgcgggcaagaagagaggtcttgcaattaaggagttgggtgggttgaacgaactgagaggccacttaattattaatgagctagaaggtgtaagggatggagaagaagcaaagaaggctcggttagtccagaagagtcacttaagtgggttaacatttaggtggacacacggttatgaaaatcagatggcttggaacctcatgcagattcgattagtctactgcaacaattgtgaaggagtcccaacactcggccatctacctaatctaacatctcttgagatttatgggttgaataagctgaaacgtgtaggagccgagttttatggttatactagcacaacttcatttcctgcactgaaaacattatacatctatcggtgcgatgggctcattgaatggatggaagcaccggggatatcagctgaaggagaggtcgtgaaggtatttccttgcctcgaagagttgacgataaagcggtgtcccagcctagagtcgattcggatcacacggggcattgcatctctccgtcaattgatgatccacagttgtgagggattatcaagcctagaggttgggctcgattactgcacctctcttcaggagttggagatacgtcgttgccctaatctggtttcaattccaaccgcacagggcatgccgtctctccgaaaattgaagattgaaagtagtgacaaattgtcaagcctaggaagtgggctcaactactgcacctctcttcagcaattggagataagggattgtcacaatctaacttcagaggtggacgccttccctgattttcagcttccacctaattcacaacttgaattcttaagcttggaagggtggcctaagctcaagtctctgccccaacaagttcagcacttgacttgtctaaagtatcttcacatagaaaagtttatgggaccagaggctcttcctgagtggttgggaaatcttacatctcttgagtatctgaggatctggtcctgtaagaatctcaagtatctgcctacacaaaatgccatgaaaaacatcacaaaattgaaggagctcgacatttcgtcatgttcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1046

Amino Acids

118.42

Weight (kDa)

7.08

Isoelectric Point (pI)

45.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 290
AarI CACCTGC 1 cut(s) 407
Acc36I ACCTGC 2 cut(s) 407, 1781
AccI GTMKAC 1 cut(s) 2280
AccII CGCG 1 cut(s) 785
AciI CCGC 8 cut(s) 103, 193, 832, 1154, 2029, 2066, 2539, 2709
AclWI GGATC 9 cut(s) 195, 552, 969, 1070, 1271, 1369, 2573, 2596, 3053
AcoI YGGCCR 2 cut(s) 615, 2314
AcsI RAATTY 8 cut(s) 509, 934, 1015, 1807, 1816, 1963, 2006, 2891
AcuI CTGAAG 8 cut(s) 198, 1080, 1853, 2037, 2508, 2645, 2786, 2823
AcyI GRCGYC 1 cut(s) 2850
AfaI GTAC 3 cut(s) 9, 725, 867
AfiI CCNNNNNNNGG 5 cut(s) 32, 1341, 1415, 2312, 2692
AflII CTTAAG 2 cut(s) 2203, 2896
AflIII ACRYGT 2 cut(s) 1774, 2368
AhdI GACNNNNNGTC 2 cut(s) 2761, 3127
AjnI CCWGG 2 cut(s) 252, 303
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AleI CACNNNNGTG 2 cut(s) 2205, 2610
Alw21I GWGCWC 2 cut(s) 1069, 3120
Alw26I GTCTC 7 cut(s) 73, 290, 359, 1466, 1744, 2730, 2931
AlwI GGATC 9 cut(s) 195, 552, 969, 1070, 1271, 1369, 2573, 2596, 3053
AoxI GGCC 6 cut(s) 201, 615, 634, 2122, 2314, 2912
ApeKI GCWGC 3 cut(s) 164, 452, 455
ApoI RAATTY 8 cut(s) 509, 934, 1015, 1807, 1816, 1963, 2006, 2891
AseI ATTAAT 1 cut(s) 2136
Asp700I GAANNNNTTC 1 cut(s) 1002
AspA2I CCTAGG 3 cut(s) 637, 1007, 2770
AspLEI GCGC 1 cut(s) 787
AspS9I GGNCC 5 cut(s) 201, 1047, 1418, 2990, 3051
AsuC2I CCSGG 2 cut(s) 789, 2475
AsuHPI GGTGA 7 cut(s) 505, 622, 698, 955, 1296, 1528, 2006
AvaII GGWCC 4 cut(s) 1047, 1418, 2990, 3051
AvrII CCTAGG 3 cut(s) 637, 1007, 2770
BalI TGGCCA 1 cut(s) 617
BanII GRGCYC 4 cut(s) 2454, 2643, 2784, 3120
BbsI GAAGAC 2 cut(s) 1136, 2046
Bbv12I GWGCWC 2 cut(s) 1069, 3120
BbvI GCAGC 3 cut(s) 151, 464, 467
BceAI ACGGC 2 cut(s) 2028, 2707
BciT130I CCWGG 2 cut(s) 254, 305
BciVI GTATCC 1 cut(s) 1594
BclI TGATCA 3 cut(s) 70, 1630, 1968
BcnI CCSGG 2 cut(s) 789, 2475
BcoDI GTCTC 7 cut(s) 73, 290, 359, 1466, 1744, 2730, 2931
BfmI CTRYAG 1 cut(s) 1503
BfrI CTTAAG 2 cut(s) 2203, 2896
BfuAI ACCTGC 2 cut(s) 407, 1781
BfuI GTATCC 1 cut(s) 1594
BglII AGATCT 1 cut(s) 1852
BisI GCNGC 4 cut(s) 165, 453, 456, 1155
BlnI CCTAGG 3 cut(s) 637, 1007, 2770
BlsI GCNGC 4 cut(s) 166, 454, 457, 1156
Bme1390I CCNGG 4 cut(s) 254, 305, 789, 2475
Bme18I GGWCC 4 cut(s) 1047, 1418, 2990, 3051
BmeRI GACNNNNNGTC 2 cut(s) 2761, 3127
BmgT120I GGNCC 5 cut(s) 201, 1047, 1418, 2990, 3051
BmiI GGNNCC 5 cut(s) 101, 1420, 2258, 2377, 2991
BmrFI CCNGG 4 cut(s) 254, 305, 789, 2475
BmsI GCATC 8 cut(s) 151, 229, 514, 880, 995, 1167, 1539, 2591
BpiI GAAGAC 2 cut(s) 1136, 2046
BplI GAGNNNNNCTC 2 cut(s) 1912, 1944
BpmI CTGGAG 1 cut(s) 54
Bpu10I CCTNAGC 1 cut(s) 2916
BpuEI CTTGAG 8 cut(s) 341, 1377, 1801, 1996, 2360, 2906, 3050, 3053
BpuMI CCSGG 2 cut(s) 789, 2475
BsaAI YACGTR 1 cut(s) 727
BsaBI GATNNNNATC 1 cut(s) 2564
BsaHI GRCGYC 1 cut(s) 2850
BsaJI CCNNGG 6 cut(s) 393, 637, 788, 1007, 2474, 2770
BsaXI ACNNNNNCTCC 6 cut(s) 27, 57, 1190, 1220, 2484, 2514
Bsc4I CCNNNNNNNGG 5 cut(s) 32, 1341, 1415, 2312, 2692
Bse1I ACTGG 2 cut(s) 435, 459
Bse3DI GCAATG 2 cut(s) 1089, 2577
Bse8I GATNNNNATC 1 cut(s) 2564
BseBI CCWGG 2 cut(s) 254, 305
BseDI CCNNGG 6 cut(s) 393, 637, 788, 1007, 2474, 2770
BseJI GATNNNNATC 1 cut(s) 2564
BseLI CCNNNNNNNGG 5 cut(s) 32, 1341, 1415, 2312, 2692
BseMI GCAATG 2 cut(s) 1089, 2577
BseMII CTCAG 3 cut(s) 2108, 2997, 3032
BseNI ACTGG 2 cut(s) 435, 459
BseRI GAGGAG 1 cut(s) 51
BseXI GCAGC 3 cut(s) 151, 464, 467
BseYI CCCAGC 1 cut(s) 2546
BsgI GTGCAG 3 cut(s) 2400, 2635, 2776
Bsh1236I CGCG 1 cut(s) 785
BshFI GGCC 6 cut(s) 203, 617, 636, 2124, 2316, 2914
BsiHKAI GWGCWC 2 cut(s) 1069, 3120
BsiSI CCGG 2 cut(s) 788, 2474
BslFI GGGAC 5 cut(s) 441, 1404, 2288, 2529, 3003
BslI CCNNNNNNNGG 5 cut(s) 32, 1341, 1415, 2312, 2692
BsmAI GTCTC 7 cut(s) 73, 290, 359, 1466, 1744, 2730, 2931
BsmBI CGTCTC 2 cut(s) 359, 2730
BsmFI GGGAC 5 cut(s) 441, 1404, 2288, 2529, 3003
BsmI GAATGC 2 cut(s) 771, 1180
BsnI GGCC 6 cut(s) 203, 617, 636, 2124, 2316, 2914
Bsp1286I GDGCHC 5 cut(s) 1069, 2454, 2643, 2784, 3120
BspACI CCGC 8 cut(s) 103, 193, 832, 1154, 2029, 2066, 2539, 2709
BspANI GGCC 6 cut(s) 203, 617, 636, 2124, 2316, 2914
BspCNI CTCAG 3 cut(s) 2109, 2998, 3033
BspFNI CGCG 1 cut(s) 785
BspHI TCATGA 3 cut(s) 1618, 1633, 2001
BspLI GGNNCC 5 cut(s) 101, 1420, 2258, 2377, 2991
BspMI ACCTGC 2 cut(s) 407, 1781
BspPI GGATC 9 cut(s) 195, 552, 969, 1070, 1271, 1369, 2573, 2596, 3053
BspQI GCTCTTC 1 cut(s) 3006
BspTI CTTAAG 2 cut(s) 2203, 2896
BsrDI GCAATG 2 cut(s) 1089, 2577
BsrI ACTGG 2 cut(s) 435, 459
BssECI CCNNGG 6 cut(s) 393, 637, 788, 1007, 2474, 2770
BssNI GRCGYC 1 cut(s) 2850
BssT1I CCWWGG 4 cut(s) 393, 637, 1007, 2770
Bst2UI CCWGG 2 cut(s) 254, 305
Bst4CI ACNGT 4 cut(s) 1523, 1736, 2234, 2609
Bst6I CTCTTC 8 cut(s) 209, 908, 2069, 2189, 2517, 2664, 2805, 3006
BstACI GRCGYC 1 cut(s) 2850
BstAFI CTTAAG 2 cut(s) 2203, 2896
BstBAI YACGTR 1 cut(s) 727
BstC8I GCNNGC 8 cut(s) 195, 367, 414, 658, 1829, 1898, 2068, 2720
BstDEI CTNAG 5 cut(s) 1185, 2117, 2916, 3006, 3041
BstFNI CGCG 1 cut(s) 785
BstHHI GCGC 1 cut(s) 787
BstMAI GTCTC 7 cut(s) 73, 290, 359, 1466, 1744, 2730, 2931
BstMWI GCNNNNNNNGC 5 cut(s) 62, 239, 791, 1091, 2177
BstNI CCWGG 2 cut(s) 254, 305
BstNSI RCATGY 2 cut(s) 1778, 2722
BstSCI CCNGG 4 cut(s) 252, 303, 787, 2473
BstSFI CTRYAG 1 cut(s) 1503
BstSNI TACGTA 1 cut(s) 727
BstUI CGCG 1 cut(s) 785
BstV1I GCAGC 3 cut(s) 151, 464, 467
BstV2I GAAGAC 2 cut(s) 1136, 2046
BstX2I RGATCY 5 cut(s) 187, 974, 1075, 1852, 3045
BstYI RGATCY 5 cut(s) 187, 974, 1075, 1852, 3045
BsuI GTATCC 1 cut(s) 1594
BsuRI GGCC 6 cut(s) 203, 617, 636, 2124, 2316, 2914
BtgZI GCGATG 1 cut(s) 2460
BtsIMutI CAGTG 1 cut(s) 2417
BveI ACCTGC 2 cut(s) 407, 1781
Cac8I GCNNGC 8 cut(s) 195, 367, 414, 658, 1829, 1898, 2068, 2720
CciI TCATGA 3 cut(s) 1618, 1633, 2001
CfoI GCGC 1 cut(s) 787
Cfr13I GGNCC 5 cut(s) 201, 1047, 1418, 2990, 3051
CseI GACGC 2 cut(s) 791, 2858
Csp6I GTAC 3 cut(s) 8, 724, 866
CviQI GTAC 3 cut(s) 8, 724, 866
DdeI CTNAG 5 cut(s) 1185, 2117, 2916, 3006, 3041
DriI GACNNNNNGTC 2 cut(s) 2761, 3127
EaeI YGGCCR 2 cut(s) 615, 2314
Eam1104I CTCTTC 8 cut(s) 209, 908, 2069, 2189, 2517, 2664, 2805, 3006
Eam1105I GACNNNNNGTC 2 cut(s) 2761, 3127
EarI CTCTTC 8 cut(s) 209, 908, 2069, 2189, 2517, 2664, 2805, 3006
EciI GGCGGA 1 cut(s) 821
Ecl136II GAGCTC 1 cut(s) 3118
Eco105I TACGTA 1 cut(s) 727
Eco130I CCWWGG 4 cut(s) 393, 637, 1007, 2770
Eco147I AGGCCT 1 cut(s) 636
Eco24I GRGCYC 4 cut(s) 2454, 2643, 2784, 3120
Eco32I GATATC 3 cut(s) 88, 250, 2481
Eco47I GGWCC 4 cut(s) 1047, 1418, 2990, 3051
Eco53kI GAGCTC 1 cut(s) 3118
Eco57I CTGAAG 8 cut(s) 198, 1080, 1853, 2037, 2508, 2645, 2786, 2823
EcoICRI GAGCTC 1 cut(s) 3118
EcoRI GAATTC 2 cut(s) 509, 2891
EcoRII CCWGG 2 cut(s) 252, 303
EcoRV GATATC 3 cut(s) 88, 250, 2481
EcoT14I CCWWGG 4 cut(s) 393, 637, 1007, 2770
EcoT22I ATGCAT 2 cut(s) 1182, 1554
EcoT38I GRGCYC 4 cut(s) 2454, 2643, 2784, 3120
ErhI CCWWGG 4 cut(s) 393, 637, 1007, 2770
Esp3I CGTCTC 2 cut(s) 359, 2730
FalI AAGNNNNNCTT 4 cut(s) 217, 249, 2186, 2218
FaqI GGGAC 5 cut(s) 441, 1404, 2288, 2529, 3003
FauI CCCGC 2 cut(s) 186, 2059
FbaI TGATCA 3 cut(s) 70, 1630, 1968
FblI GTMKAC 1 cut(s) 2280
Fnu4HI GCNGC 4 cut(s) 165, 453, 456, 1155
FriOI GRGCYC 4 cut(s) 2454, 2643, 2784, 3120
Fsp4HI GCNGC 4 cut(s) 165, 453, 456, 1155
GlaI GCGC 1 cut(s) 786
GluI GCNGC 4 cut(s) 165, 453, 456, 1155
GsaI CCCAGC 1 cut(s) 2550
GsuI CTGGAG 1 cut(s) 54
HaeIII GGCC 6 cut(s) 203, 617, 636, 2124, 2316, 2914
HapII CCGG 2 cut(s) 788, 2474
HgaI GACGC 2 cut(s) 791, 2858
HhaI GCGC 1 cut(s) 787
Hin1I GRCGYC 1 cut(s) 2850
Hin6I GCGC 1 cut(s) 785
HinP1I GCGC 1 cut(s) 785
HincII GTYRAC 3 cut(s) 2034, 2214, 2529
HindII GTYRAC 3 cut(s) 2034, 2214, 2529
HindIII AAGCTT 3 cut(s) 1171, 1760, 2899
HpaI GTTAAC 2 cut(s) 2034, 2214
HpaII CCGG 2 cut(s) 788, 2474
HphI GGTGA 7 cut(s) 505, 622, 698, 955, 1296, 1528, 2006
Hpy166II GTNNAC 7 cut(s) 724, 2034, 2214, 2226, 2281, 2529, 2848
Hpy8I GTNNAC 7 cut(s) 724, 2034, 2214, 2226, 2281, 2529, 2848
Hpy99I CGWCG 1 cut(s) 2682
HpyCH4III ACNGT 4 cut(s) 1523, 1736, 2234, 2609
HpyCH4IV ACGT 4 cut(s) 726, 876, 2368, 2677
HpyF10VI GCNNNNNNNGC 5 cut(s) 62, 239, 791, 1091, 2177
HpyF3I CTNAG 5 cut(s) 1185, 2117, 2916, 3006, 3041
HpySE526I ACGT 4 cut(s) 726, 876, 2368, 2677
Hsp92I GRCGYC 1 cut(s) 2850
HspAI GCGC 1 cut(s) 785
Ksp22I TGATCA 3 cut(s) 70, 1630, 1968
KspAI GTTAAC 2 cut(s) 2034, 2214
LguI GCTCTTC 1 cut(s) 3006
LmnI GCTCC 4 cut(s) 1090, 1337, 2375, 3115
Lsp1109I GCAGC 3 cut(s) 151, 464, 467
LweI GCATC 8 cut(s) 151, 229, 514, 880, 995, 1167, 1539, 2591
MaeII ACGT 4 cut(s) 726, 876, 2368, 2677
MaeIII GTNAC 6 cut(s) 779, 961, 1349, 2198, 2753, 2825
MfeI CAATTG 6 cut(s) 1356, 1433, 1838, 2290, 2594, 2807
MflI RGATCY 5 cut(s) 187, 974, 1075, 1852, 3045
MhlI GDGCHC 5 cut(s) 1069, 2454, 2643, 2784, 3120
MlsI TGGCCA 1 cut(s) 617
MluNI TGGCCA 1 cut(s) 617
MlyI GAGTC 5 cut(s) 75, 1468, 2206, 2310, 2564
MmeI TCCRAC 6 cut(s) 609, 1269, 1402, 1697, 2649, 2729
Mox20I TGGCCA 1 cut(s) 617
Mph1103I ATGCAT 2 cut(s) 1182, 1554
MroXI GAANNNNTTC 1 cut(s) 1002
MscI TGGCCA 1 cut(s) 617
MseI TTAA 8 cut(s) 662, 2033, 2091, 2129, 2136, 2204, 2213, 2897
MslI CAYNNNNRTG 4 cut(s) 2205, 2221, 2235, 2610
Msp20I TGGCCA 1 cut(s) 617
MspA1I CMGCKG 1 cut(s) 2486
MspCI CTTAAG 2 cut(s) 2203, 2896
MspI CCGG 2 cut(s) 788, 2474
MspR9I CCNGG 4 cut(s) 254, 305, 789, 2475
MunI CAATTG 6 cut(s) 1356, 1433, 1838, 2290, 2594, 2807
Mva1269I GAATGC 2 cut(s) 771, 1180
MvaI CCWGG 2 cut(s) 254, 305
MvnI CGCG 1 cut(s) 785
MwoI GCNNNNNNNGC 5 cut(s) 62, 239, 791, 1091, 2177
NciI CCSGG 2 cut(s) 789, 2475
NlaIV GGNNCC 5 cut(s) 101, 1420, 2258, 2377, 2991
NmeAIII GCCGAG 3 cut(s) 229, 2292, 2404
NmuCI GTSAC 5 cut(s) 779, 961, 2198, 2753, 2825
NsiI ATGCAT 2 cut(s) 1182, 1554
NspI RCATGY 2 cut(s) 1778, 2722
OliI CACNNNNGTG 2 cut(s) 2205, 2610
PaeI GCATGC 1 cut(s) 2722
PagI TCATGA 3 cut(s) 1618, 1633, 2001
PaqCI CACCTGC 1 cut(s) 407
PceI AGGCCT 1 cut(s) 636
PciI ACATGT 1 cut(s) 1774
PciSI GCTCTTC 1 cut(s) 3006
PctI GAATGC 2 cut(s) 771, 1180
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 7 cut(s) 773, 1542, 1663, 1957, 2269, 2560, 3061
PflFI GACNNNGTC 1 cut(s) 1736
PfoI TCCNGGA 1 cut(s) 252
PkrI GCNGC 4 cut(s) 166, 454, 457, 1156
PleI GAGTC 5 cut(s) 75, 1468, 2205, 2309, 2563
PpsI GAGTC 5 cut(s) 75, 1468, 2205, 2309, 2563
Ppu21I YACGTR 1 cut(s) 727
PscI ACATGT 1 cut(s) 1774
PshBI ATTAAT 1 cut(s) 2136
PsiI TTATAA 1 cut(s) 290
Psp124BI GAGCTC 1 cut(s) 3120
Psp6I CCWGG 2 cut(s) 252, 303
PspFI CCCAGC 1 cut(s) 2546
PspGI CCWGG 2 cut(s) 252, 303
PspN4I GGNNCC 5 cut(s) 101, 1420, 2258, 2377, 2991
PspPI GGNCC 5 cut(s) 201, 1047, 1418, 2990, 3051
PsuI RGATCY 5 cut(s) 187, 974, 1075, 1852, 3045
PsyI GACNNNGTC 1 cut(s) 1736
PvuII CAGCTG 1 cut(s) 2486
RsaI GTAC 3 cut(s) 9, 725, 867
RsaNI GTAC 3 cut(s) 8, 724, 866
RseI CAYNNNNRTG 4 cut(s) 2205, 2221, 2235, 2610
SacI GAGCTC 1 cut(s) 3120
SapI GCTCTTC 1 cut(s) 3006
SaqAI TTAA 8 cut(s) 662, 2033, 2091, 2129, 2136, 2204, 2213, 2897
SatI GCNGC 4 cut(s) 165, 453, 456, 1155
Sau96I GGNCC 5 cut(s) 201, 1047, 1418, 2990, 3051
SchI GAGTC 5 cut(s) 75, 1468, 2206, 2310, 2564
ScrFI CCNGG 4 cut(s) 254, 305, 789, 2475
SduI GDGCHC 5 cut(s) 1069, 2454, 2643, 2784, 3120
SfaNI GCATC 8 cut(s) 151, 229, 514, 880, 995, 1167, 1539, 2591
SfcI CTRYAG 1 cut(s) 1503
SinI GGWCC 4 cut(s) 1047, 1418, 2990, 3051
SmiMI CAYNNNNRTG 4 cut(s) 2205, 2221, 2235, 2610
SnaBI TACGTA 1 cut(s) 727
SphI GCATGC 1 cut(s) 2722
SseBI AGGCCT 1 cut(s) 636
SsiI CCGC 8 cut(s) 103, 193, 832, 1154, 2029, 2066, 2539, 2709
SspI AATATT 1 cut(s) 601
SstI GAGCTC 1 cut(s) 3120
StuI AGGCCT 1 cut(s) 636
StyD4I CCNGG 4 cut(s) 252, 303, 787, 2473
StyI CCWWGG 4 cut(s) 393, 637, 1007, 2770
TaaI ACNGT 4 cut(s) 1523, 1736, 2234, 2609
TaiI ACGT 4 cut(s) 729, 879, 2371, 2680
TaqI TCGA 8 cut(s) 84, 1271, 1648, 2272, 2520, 2558, 2643, 3120
TatI WGTACW 2 cut(s) 7, 865
TauI GCSGC 1 cut(s) 1157
TfiI GAWTC 7 cut(s) 773, 1542, 1663, 1957, 2269, 2560, 3061
Tru1I TTAA 8 cut(s) 662, 2033, 2091, 2129, 2136, 2204, 2213, 2897
Tru9I TTAA 8 cut(s) 662, 2033, 2091, 2129, 2136, 2204, 2213, 2897
TscAI CASTG 1 cut(s) 2424
TseFI GTSAC 5 cut(s) 779, 961, 2198, 2753, 2825
TseI GCWGC 3 cut(s) 164, 452, 455
Tsp45I GTSAC 5 cut(s) 779, 961, 2198, 2753, 2825
TspGWI ACGGA 2 cut(s) 1675, 2579
TspRI CASTG 1 cut(s) 2424
Tth111I GACNNNGTC 1 cut(s) 1736
Vha464I CTTAAG 2 cut(s) 2203, 2896
VpaK11BI GGWCC 4 cut(s) 1047, 1418, 2990, 3051
VspI ATTAAT 1 cut(s) 2136
XapI RAATTY 8 cut(s) 509, 934, 1015, 1807, 1816, 1963, 2006, 2891
XbaI TCTAGA 1 cut(s) 1849
XceI RCATGY 2 cut(s) 1778, 2722
XcmI CCANNNNNNNNNTGG 2 cut(s) 625, 1412
XmaJI CCTAGG 3 cut(s) 637, 1007, 2770
XmiI GTMKAC 1 cut(s) 2280
XmnI GAANNNNTTC 1 cut(s) 1002
Zsp2I ATGCAT 2 cut(s) 1182, 1554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.