Rmu_sc0002922.1_g000011

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002922.1
Physical Location & Seq
Forward (+)
29573 .. 34312
4740 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002922.1_g000011.1.cds

Sequence Viewer

Length: 3432 bp
atggctgaatttcttacttttggtgctcaagaattgctgaagaaagtggcttcattggccgctcaagagttcgatcttgtatggggattcaatggagaaataacaaagctgcgtgagtcggcgctctttcttgaggctgtgctacaagatgccgaacattcgccaccttggatgaagaagcttgaagacatagctcaacatgccgacgatgtgttggatgattatggatacgagcttctccggcgtaaggtgcaattgcgaaaccagatgaagaaaaaggtgcaagattttttttccctctccaatcccattatatttcgtgttaaaatgacacagaaaattaagaagatcaacacatctttggatgagttgaataagaaggcaggtgttattggcttagttgctagacgatccgtcgatgcaacaacttcccatggtataagcattgacagggtgacctgctctcagttaaaagaagatgaaaacaatatcattggaagggacgatgttgtggcagatatagttcaatccctgaccaaatcaaaccacaatctggaaagtgatctcccggttttggccattgtgggtatgggagggcttggcaagacaactttggctcaatcaatatataataaatctgagataactaaacactttgacaaaaagatgtggatatgtgtatctaaccattttgaagtcaattcaattctgagaggcatcttggaatatcttaaaccagaaaatgctgcggtgacaggtatagatgcaatatgtaacattcttcgagaaaagttgaaaaaacagagataccttcttatacttgatgatgtgtggaatgaagatgctgaaaaatggaatcatttgaagagtcatctgctaagaattaccgatgcccaaggaagcagcattgttgtcactactcgcaaggacaaagttgcaaaaatggtggagacccttcgtaggtgtgatttgagaaaactatcagatgatgagtgttggcttatattgaaaaatagagcagttcctgtcggaagtgttcatatatttgaagatcaagagacaattggaagggagattgccaaaaagtgtgctggtgtaccattagtggcaaaggtattaggaagcattatgcgctctaaaatgagcaatgaatggagatcaattgtaaaaagtgaaatatgggatttaacggcagaagaagacagaatcatgtcgattttaaagttgagttttgatgaattgaaaccttcatcattgaaacagtgttttgcatactgctcgatgttcatcaaagactttgaaatggaaaaggatgacttagttcaactttgtaatttggaaattttgaagattcaggggtttatgggtgttaagtttccatcatggttattgctttcctgcaacttgaaagaaattgaattagcagggtgcaacaaatgcgaaggagtcccaatacttggccatctgccaaatctcatacatgttaagatgaaggacatgcaaaacctaaggtgcttggggtttgagttttatggttacgatcagatttccggtgcaacaacaagtgacgagagaaagactttgtttcctgctttgagatcattacatattgagaatgccgagaatctgatagattggatggaagcaggggaagtgatgctgacggcagaaaaattaagggtgtttccttaccttgaggacctgaccctgcggcgttgtaagcaattgagaagtgctcccagtcattttccatctctcaagcagttgtcgatacaaggagtgcaaagtggtatgcctatagcaagtattttaagcaatagactgaccactctcacttgtctcgaaatatatagtgtcaagggacttactagtcttccggaagggacgttaagaaacaacaagaatcttgaatctttgtatataggcaactgtccggagttaagttgcattgctccccatggatttgactgctgcgcatctcttcagacactgagtatttggaagtgtcctaagttgaggtatttatccgatgggctactcccactctctctcaaggagttgtccataacagattgctccagtctagagtccgttccaattatccctgagcaaggcggtctcccatctctgcgcaaattgcaaatatccgagtgttctcagttatccagtttacctgatgggctacaatgctgcacatctcttcaagaattgcaaatatcgaagtgttctcagttatccagtttacctgatgggctacaatactgcacatctcttcaaggattgcgaatattcaagtgttctcaattatccagtttacctgatgggctacaatactgcacatctcttcaacgactggggatatggagctgcccagagataacgtccattccagcccaatactgcacgtctcttcaacagctggacatagggagctgcccaaagataacatccattccaattccatctgcgggcctcccgtcccttggtcgactggtgcttatgcagtgtcctgaattatcaagcctaccgagtggactagggtgctgcacctctcttgttgatttgacggtaagagagtgccctaaggtaacatccattccaattggcagtctcagtacaacccttcgagacttgtgtgtagataatccagagtctcttccaattttacacggcggcttcacatccctccgtcgattgggaattgagggatgtcaaagtacacaaattgatctgcaattttgtcaaatcctcgtctctcttgaggttttgagaataagtgattgtcctaatctagagactgttccaagtttagacaagctcacatccctccgtcagttgacgatttttcgatgttccagattaacatgtctacccagtgggttagcaatggcatccccacacgtattcacccgtctcaagggattggaaattggtcggttttggaatgagctggattcattcccggctcttcaggttctaccacaacttgaatcattggagatctgggggtggccgaagctcaagtctctgcctgaacaaattcaacacttgacgtctttgacctttttgcagataggggactttgatggactggaggctattccagaatggttgggaaaccttgcatctcttcacttcttagatatttgtaattgcaagaatctgatgtatctaccttccgtccaagctatgcaacgcctcaccaaattagattggctagatatctccaattgtccccttttgagcgaaagatgcaccgcggagagcggcccagagtggcctaagatttctcatattccaaacatctctggaccatctacaattttatctgtgacacaccagctgcaagataaacatgtatgtgtccaattgcagaagattacttcttttctagctctaacggttcaggggcaagcattcctcgtttcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1143

Amino Acids

127.65

Weight (kDa)

6.29

Isoelectric Point (pI)

52.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 374
AasI GACNNNNNNGTC 1 cut(s) 1869
AatII GACGTC 1 cut(s) 3056
Acc16I TGCGCA 2 cut(s) 1975, 2132
Acc36I ACCTGC 2 cut(s) 374, 467
AccB7I CCANNNNNTGG 2 cut(s) 553, 1457
AccBSI CCGCTC 2 cut(s) 62, 3267
AccI GTMKAC 2 cut(s) 2488, 2869
AccII CGCG 1 cut(s) 3260
AccIII TCCGGA 2 cut(s) 1876, 1933
AciI CCGC 9 cut(s) 60, 749, 1711, 2115, 2468, 2673, 3258, 3260, 3267
AclWI GGATC 1 cut(s) 405
AcoI YGGCCR 4 cut(s) 57, 576, 1459, 3011
AcsI RAATTY 3 cut(s) 8, 1341, 3039
AcuI CTGAAG 3 cut(s) 59, 1967, 2954
AcyI GRCGYC 1 cut(s) 3053
AfaI GTAC 3 cut(s) 1098, 2617, 2719
AflIII ACRYGT 4 cut(s) 1480, 2864, 2899, 3355
AhdI GACNNNNNGTC 1 cut(s) 413
AhlI ACTAGT 1 cut(s) 1868
AjiI CACGTC 1 cut(s) 2406
Alw21I GWGCWC 2 cut(s) 28, 1738
AlwI GGATC 1 cut(s) 405
AlwNI CAGNNNCTG 2 cut(s) 1025, 1990
Aor13HI TCCGGA 2 cut(s) 1876, 1933
AoxI GGCC 7 cut(s) 57, 576, 1459, 2470, 3011, 3268, 3278
ApeKI GCWGC 9 cut(s) 109, 746, 903, 1971, 2190, 2367, 2433, 2544, 3343
ApoI RAATTY 3 cut(s) 8, 1341, 3039
ArsI GACNNNNNNTTYG 2 cut(s) 3008, 3040
Asp700I GAANNNNTTC 1 cut(s) 3039
AspLEI GCGC 4 cut(s) 124, 1134, 1976, 2133
AspS9I GGNCC 4 cut(s) 1699, 2470, 3269, 3311
AsuC2I CCSGG 2 cut(s) 569, 2963
AsuHPI GGTGA 4 cut(s) 466, 763, 2899, 3193
AvaII GGWCC 2 cut(s) 1699, 3311
AxyI CCTNAGG 2 cut(s) 1508, 2583
BaeGI GKGCMC 1 cut(s) 2582
BalI TGGCCA 2 cut(s) 578, 1461
BbsI GAAGAC 3 cut(s) 192, 1206, 1865
Bbv12I GWGCWC 2 cut(s) 28, 1738
BbvI GCAGC 9 cut(s) 96, 733, 915, 1958, 2177, 2354, 2420, 2531, 3330
BceAI ACGGC 3 cut(s) 1206, 1680, 2686
BcgI CGANNNNNNTGC 2 cut(s) 1260, 1294
BciVI GTATCC 1 cut(s) 221
BcnI CCSGG 2 cut(s) 569, 2963
BcuI ACTAGT 1 cut(s) 1868
BfaI CTAG 7 cut(s) 405, 1869, 2084, 2537, 2792, 3218, 3392
BfmI CTRYAG 1 cut(s) 1797
BfoI RGCGCY 1 cut(s) 125
BfuAI ACCTGC 2 cut(s) 374, 467
BfuI GTATCC 1 cut(s) 221
BglII AGATCT 1 cut(s) 3000
Bme1390I CCNGG 2 cut(s) 569, 2963
Bme18I GGWCC 2 cut(s) 1699, 3311
BmeRI GACNNNNNGTC 1 cut(s) 413
BmgBI CACGTC 1 cut(s) 2406
BmgT120I GGNCC 4 cut(s) 1699, 2470, 3269, 3311
BmrFI CCNGG 2 cut(s) 569, 2963
BmrI ACTGGG 3 cut(s) 1734, 2363, 2868
BmuI ACTGGG 3 cut(s) 1734, 2363, 2868
BpiI GAAGAC 3 cut(s) 192, 1206, 1865
BplI GAGNNNNNCTC 2 cut(s) 1720, 1752
BpmI CTGGAG 2 cut(s) 2062, 3113
Bpu10I CCTNAGC 1 cut(s) 2106
BpuEI CTTGAG 9 cut(s) 12, 48, 152, 1715, 1742, 2036, 2780, 2900, 3005
BpuMI CCSGG 2 cut(s) 569, 2963
BsaAI YACGTR 1 cut(s) 2902
BsaBI GATNNNNATC 1 cut(s) 1286
BsaHI GRCGYC 1 cut(s) 3053
BsaI GGTCTC 2 cut(s) 944, 2123
BsaJI CCNNGG 6 cut(s) 167, 433, 895, 1957, 2482, 3258
BsaWI WCCGGW 3 cut(s) 1550, 1876, 1933
Bse1I ACTGG 9 cut(s) 1740, 2079, 2166, 2238, 2310, 2358, 2496, 2874, 3096
Bse21I CCTNAGG 2 cut(s) 1508, 2583
Bse3DI GCAATG 3 cut(s) 1153, 1947, 2892
Bse8I GATNNNNATC 1 cut(s) 1286
BseAI TCCGGA 2 cut(s) 1876, 1933
BseDI CCNNGG 6 cut(s) 167, 433, 895, 1957, 2482, 3258
BseJI GATNNNNATC 1 cut(s) 1286
BseMI GCAATG 3 cut(s) 1153, 1947, 2892
BseMII CTCAG 8 cut(s) 479, 630, 701, 1982, 2097, 2171, 2243, 2626
BseNI ACTGG 9 cut(s) 1740, 2079, 2166, 2238, 2310, 2358, 2496, 2874, 3096
BseSI GKGCMC 1 cut(s) 2582
BseXI GCAGC 9 cut(s) 96, 733, 915, 1958, 2177, 2354, 2420, 2531, 3330
BsgI GTGCAG 5 cut(s) 2176, 2248, 2320, 2386, 2530
Bsh1236I CGCG 1 cut(s) 3260
BshFI GGCC 7 cut(s) 59, 578, 1461, 2472, 3013, 3270, 3280
BsiHKAI GWGCWC 2 cut(s) 28, 1738
BsiSI CCGG 6 cut(s) 241, 569, 1551, 1877, 1934, 2963
BslFI GGGAC 7 cut(s) 515, 1433, 1875, 1897, 2464, 3092, 3219
BsmBI CGTCTC 3 cut(s) 2412, 2758, 2918
BsmFI GGGAC 7 cut(s) 515, 1433, 1875, 1897, 2464, 3092, 3219
BsmI GAATGC 2 cut(s) 1621, 3416
BsnI GGCC 7 cut(s) 59, 578, 1461, 2472, 3013, 3270, 3280
Bso31I GGTCTC 2 cut(s) 944, 2123
Bsp1286I GDGCHC 3 cut(s) 28, 1738, 2582
Bsp13I TCCGGA 2 cut(s) 1876, 1933
Bsp19I CCATGG 2 cut(s) 433, 1957
BspACI CCGC 9 cut(s) 60, 749, 1711, 2115, 2468, 2673, 3258, 3260, 3267
BspANI GGCC 7 cut(s) 59, 578, 1461, 2472, 3013, 3270, 3280
BspCNI CTCAG 8 cut(s) 478, 631, 702, 1983, 2098, 2170, 2242, 2625
BspEI TCCGGA 2 cut(s) 1876, 1933
BspFNI CGCG 1 cut(s) 3260
BspMI ACCTGC 2 cut(s) 374, 467
BspPI GGATC 1 cut(s) 405
BspQI GCTCTTC 1 cut(s) 2973
BspTNI GGTCTC 2 cut(s) 944, 2123
BsrBI CCGCTC 2 cut(s) 62, 3267
BsrDI GCAATG 3 cut(s) 1153, 1947, 2892
BsrI ACTGG 9 cut(s) 1740, 2079, 2166, 2238, 2310, 2358, 2496, 2874, 3096
BssECI CCNNGG 6 cut(s) 167, 433, 895, 1957, 2482, 3258
BssNI GRCGYC 1 cut(s) 3053
BssT1I CCWWGG 5 cut(s) 167, 433, 895, 1957, 2482
Bst4CI ACNGT 5 cut(s) 1263, 1931, 2569, 2800, 3403
Bst6I CTCTTC 9 cut(s) 860, 1986, 2205, 2277, 2349, 2415, 2661, 2973, 3135
BstACI GRCGYC 1 cut(s) 3053
BstAPI GCANNNNNTGC 1 cut(s) 1437
BstBAI YACGTR 1 cut(s) 2902
BstC8I GCNNGC 2 cut(s) 2470, 3414
BstDSI CCRYGG 3 cut(s) 433, 1957, 3258
BstEII GGTNACC 1 cut(s) 454
BstENI CCTNNNNNAGG 1 cut(s) 2109
BstFNI CGCG 1 cut(s) 3260
BstH2I RGCGCY 1 cut(s) 125
BstHHI GCGC 4 cut(s) 124, 1134, 1976, 2133
BstMWI GCNNNNNNNGC 9 cut(s) 56, 200, 241, 250, 1131, 1437, 1720, 2137, 3252
BstNSI RCATGY 5 cut(s) 203, 1484, 1501, 2868, 3359
BstPI GGTNACC 1 cut(s) 454
BstSCI CCNGG 2 cut(s) 567, 2961
BstSFI CTRYAG 1 cut(s) 1797
BstSLI GKGCMC 1 cut(s) 2582
BstUI CGCG 1 cut(s) 3260
BstV1I GCAGC 9 cut(s) 96, 733, 915, 1958, 2177, 2354, 2420, 2531, 3330
BstV2I GAAGAC 3 cut(s) 192, 1206, 1865
BstX2I RGATCY 1 cut(s) 3000
BstYI RGATCY 1 cut(s) 3000
Bsu36I CCTNAGG 2 cut(s) 1508, 2583
BsuI GTATCC 1 cut(s) 221
BsuRI GGCC 7 cut(s) 59, 578, 1461, 2472, 3013, 3270, 3280
BtgI CCRYGG 3 cut(s) 433, 1957, 3258
BtrI CACGTC 1 cut(s) 2406
BtsI GCAGTG 1 cut(s) 2510
BtsIMutI CAGTG 4 cut(s) 1268, 1988, 2510, 2881
BveI ACCTGC 2 cut(s) 374, 467
Cac8I GCNNGC 2 cut(s) 2470, 3414
CaiI CAGNNNCTG 2 cut(s) 1025, 1990
CfoI GCGC 4 cut(s) 124, 1134, 1976, 2133
Cfr13I GGNCC 4 cut(s) 1699, 2470, 3269, 3311
Cfr42I CCGCGG 1 cut(s) 3261
Csp6I GTAC 3 cut(s) 1097, 2616, 2718
CspCI CAANNNNNGTGG 2 cut(s) 927, 962
CviAII CATG 9 cut(s) 200, 434, 1210, 1383, 1481, 1498, 1958, 2865, 3356
CviQI GTAC 3 cut(s) 1097, 2616, 2718
DraI TTTAAA 1 cut(s) 1221
DrdI GACNNNNNNGTC 1 cut(s) 1869
DriI GACNNNNNGTC 1 cut(s) 413
DseDI GACNNNNNNGTC 1 cut(s) 1869
EaeI YGGCCR 4 cut(s) 57, 576, 1459, 3011
Eam1104I CTCTTC 9 cut(s) 860, 1986, 2205, 2277, 2349, 2415, 2661, 2973, 3135
Eam1105I GACNNNNNGTC 1 cut(s) 413
EarI CTCTTC 9 cut(s) 860, 1986, 2205, 2277, 2349, 2415, 2661, 2973, 3135
Eco130I CCWWGG 5 cut(s) 167, 433, 895, 1957, 2482
Eco31I GGTCTC 2 cut(s) 944, 2123
Eco32I GATATC 1 cut(s) 3223
Eco47I GGWCC 2 cut(s) 1699, 3311
Eco57I CTGAAG 3 cut(s) 59, 1967, 2954
Eco81I CCTNAGG 2 cut(s) 1508, 2583
Eco91I GGTNACC 1 cut(s) 454
EcoNI CCTNNNNNAGG 1 cut(s) 2109
EcoO109I RGGNCCY 1 cut(s) 1699
EcoO65I GGTNACC 1 cut(s) 454
EcoRV GATATC 1 cut(s) 3223
EcoT14I CCWWGG 5 cut(s) 167, 433, 895, 1957, 2482
ErhI CCWWGG 5 cut(s) 167, 433, 895, 1957, 2482
Esp3I CGTCTC 3 cut(s) 2412, 2758, 2918
FaeI CATG 9 cut(s) 203, 437, 1213, 1386, 1484, 1501, 1961, 2868, 3359
FalI AAGNNNNNCTT 2 cut(s) 1301, 1333
FaqI GGGAC 7 cut(s) 515, 1433, 1875, 1897, 2464, 3092, 3219
FatI CATG 9 cut(s) 199, 433, 1209, 1382, 1480, 1497, 1957, 2864, 3355
FauI CCCGC 1 cut(s) 2461
FblI GTMKAC 2 cut(s) 2488, 2869
FspBI CTAG 7 cut(s) 405, 1869, 2084, 2537, 2792, 3218, 3392
FspI TGCGCA 2 cut(s) 1975, 2132
GlaI GCGC 4 cut(s) 123, 1133, 1975, 2132
GsuI CTGGAG 2 cut(s) 2062, 3113
HaeII RGCGCY 1 cut(s) 125
HaeIII GGCC 7 cut(s) 59, 578, 1461, 2472, 3013, 3270, 3280
HapII CCGG 6 cut(s) 241, 569, 1551, 1877, 1934, 2963
HhaI GCGC 4 cut(s) 124, 1134, 1976, 2133
Hin1I GRCGYC 1 cut(s) 3053
Hin1II CATG 9 cut(s) 203, 437, 1213, 1386, 1484, 1501, 1961, 2868, 3359
Hin6I GCGC 4 cut(s) 122, 1132, 1974, 2131
HinP1I GCGC 4 cut(s) 122, 1132, 1974, 2131
HincII GTYRAC 2 cut(s) 2489, 2838
HindII GTYRAC 2 cut(s) 2489, 2838
HindIII AAGCTT 1 cut(s) 179
HpaII CCGG 6 cut(s) 241, 569, 1551, 1877, 1934, 2963
HphI GGTGA 4 cut(s) 466, 763, 2899, 3193
Hpy166II GTNNAC 9 cut(s) 1097, 2171, 2243, 2315, 2489, 2534, 2720, 2838, 2870
Hpy8I GTNNAC 9 cut(s) 1097, 2171, 2243, 2315, 2489, 2534, 2720, 2838, 2870
Hpy99I CGWCG 3 cut(s) 209, 419, 2694
HpyCH4III ACNGT 5 cut(s) 1263, 1931, 2569, 2800, 3403
HpyCH4IV ACGT 5 cut(s) 1886, 2381, 2405, 2901, 3053
HpyF10VI GCNNNNNNNGC 9 cut(s) 56, 200, 241, 250, 1131, 1437, 1720, 2137, 3252
HpySE526I ACGT 5 cut(s) 1886, 2381, 2405, 2901, 3053
Hsp92I GRCGYC 1 cut(s) 3053
Hsp92II CATG 9 cut(s) 203, 437, 1213, 1386, 1484, 1501, 1961, 2868, 3359
HspAI GCGC 4 cut(s) 122, 1132, 1974, 2131
Kpn2I TCCGGA 2 cut(s) 1876, 1933
KspI CCGCGG 1 cut(s) 3261
LguI GCTCTTC 1 cut(s) 2973
LmnI GCTCC 5 cut(s) 1741, 1957, 2081, 2364, 2430
Lsp1109I GCAGC 9 cut(s) 96, 733, 915, 1958, 2177, 2354, 2420, 2531, 3330
MaeI CTAG 7 cut(s) 405, 1869, 2084, 2537, 2792, 3218, 3392
MaeII ACGT 5 cut(s) 1886, 2381, 2405, 2901, 3053
MaeIII GTNAC 8 cut(s) 454, 751, 773, 913, 1535, 1565, 2587, 3331
MbiI CCGCTC 2 cut(s) 62, 3267
MfeI CAATTG 7 cut(s) 254, 1062, 1161, 1724, 2601, 3229, 3368
MflI RGATCY 1 cut(s) 3000
MhlI GDGCHC 3 cut(s) 28, 1738, 2582
MlsI TGGCCA 2 cut(s) 578, 1461
MluNI TGGCCA 2 cut(s) 578, 1461
MlyI GAGTC 5 cut(s) 125, 877, 1455, 2096, 2660
MmeI TCCRAC 2 cut(s) 195, 1009
Mox20I TGGCCA 2 cut(s) 578, 1461
MroI TCCGGA 2 cut(s) 1876, 1933
MroXI GAANNNNTTC 1 cut(s) 3039
MscI TGGCCA 2 cut(s) 578, 1461
MslI CAYNNNNRTG 1 cut(s) 3360
Msp20I TGGCCA 2 cut(s) 578, 1461
MspA1I CMGCKG 3 cut(s) 2419, 3260, 3343
MspI CCGG 6 cut(s) 241, 569, 1551, 1877, 1934, 2963
MspR9I CCNGG 2 cut(s) 569, 2963
MunI CAATTG 7 cut(s) 254, 1062, 1161, 1724, 2601, 3229, 3368
Mva1269I GAATGC 2 cut(s) 1621, 3416
MvnI CGCG 1 cut(s) 3260
MwoI GCNNNNNNNGC 9 cut(s) 56, 200, 241, 250, 1131, 1437, 1720, 2137, 3252
NciI CCSGG 2 cut(s) 569, 2963
NcoI CCATGG 2 cut(s) 433, 1957
NlaIII CATG 9 cut(s) 203, 437, 1213, 1386, 1484, 1501, 1961, 2868, 3359
NmeAIII GCCGAG 1 cut(s) 1645
NmuCI GTSAC 5 cut(s) 454, 751, 913, 1565, 3331
NsbI TGCGCA 2 cut(s) 1975, 2132
NspI RCATGY 5 cut(s) 203, 1484, 1501, 2868, 3359
PaqCI CACCTGC 1 cut(s) 374
PciI ACATGT 3 cut(s) 1480, 2864, 3355
PciSI GCTCTTC 1 cut(s) 2973
PctI GAATGC 2 cut(s) 1621, 3416
PdmI GAANNNNTTC 1 cut(s) 3039
PflMI CCANNNNNTGG 2 cut(s) 553, 1457
PleI GAGTC 5 cut(s) 124, 876, 1454, 2095, 2659
PpsI GAGTC 5 cut(s) 124, 876, 1454, 2095, 2659
Ppu21I YACGTR 1 cut(s) 2902
PpuMI RGGWCCY 1 cut(s) 1699
PscI ACATGT 3 cut(s) 1480, 2864, 3355
Psp5II RGGWCCY 1 cut(s) 1699
PspEI GGTNACC 1 cut(s) 454
PspPI GGNCC 4 cut(s) 1699, 2470, 3269, 3311
PspPPI RGGWCCY 1 cut(s) 1699
PstNI CAGNNNCTG 2 cut(s) 1025, 1990
PsuI RGATCY 1 cut(s) 3000
PvuII CAGCTG 2 cut(s) 2419, 3343
RsaI GTAC 3 cut(s) 1098, 2617, 2719
RsaNI GTAC 3 cut(s) 1097, 2616, 2718
RseI CAYNNNNRTG 1 cut(s) 3360
SacII CCGCGG 1 cut(s) 3261
SalI GTCGAC 1 cut(s) 2487
SapI GCTCTTC 1 cut(s) 2973
Sau96I GGNCC 4 cut(s) 1699, 2470, 3269, 3311
SchI GAGTC 5 cut(s) 125, 877, 1455, 2096, 2660
ScrFI CCNGG 2 cut(s) 569, 2963
SduI GDGCHC 3 cut(s) 28, 1738, 2582
SfcI CTRYAG 1 cut(s) 1797
Sfr303I CCGCGG 1 cut(s) 3261
SgrBI CCGCGG 1 cut(s) 3261
SinI GGWCC 2 cut(s) 1699, 3311
SmiMI CAYNNNNRTG 1 cut(s) 3360
SmlI CTYRAG 9 cut(s) 27, 63, 131, 1694, 1757, 2051, 2759, 2915, 3020
SmoI CTYRAG 9 cut(s) 27, 63, 131, 1694, 1757, 2051, 2759, 2915, 3020
SpeI ACTAGT 1 cut(s) 1868
SsiI CCGC 9 cut(s) 60, 749, 1711, 2115, 2468, 2673, 3258, 3260, 3267
SspI AATATT 1 cut(s) 2289
SspMI CTAG 7 cut(s) 405, 1869, 2084, 2537, 2792, 3218, 3392
StyD4I CCNGG 2 cut(s) 567, 2961
StyI CCWWGG 5 cut(s) 167, 433, 895, 1957, 2482
TaaI ACNGT 5 cut(s) 1263, 1931, 2569, 2800, 3403
TaiI ACGT 5 cut(s) 1889, 2384, 2408, 2904, 3056
TatI WGTACW 2 cut(s) 2615, 2717
TauI GCSGC 4 cut(s) 62, 1714, 2676, 3270
TscAI CASTG 4 cut(s) 1268, 1995, 2510, 2881
TseFI GTSAC 5 cut(s) 454, 751, 913, 1565, 3331
TseI GCWGC 9 cut(s) 109, 746, 903, 1971, 2190, 2367, 2433, 2544, 3343
Tsp45I GTSAC 5 cut(s) 454, 751, 913, 1565, 3331
TspGWI ACGGA 5 cut(s) 403, 2080, 2678, 2819, 3169
TspRI CASTG 4 cut(s) 1268, 1995, 2510, 2881
Van91I CCANNNNNTGG 2 cut(s) 553, 1457
VpaK11BI GGWCC 2 cut(s) 1699, 3311
XagI CCTNNNNNAGG 1 cut(s) 2109
XapI RAATTY 3 cut(s) 8, 1341, 3039
XbaI TCTAGA 2 cut(s) 2083, 2791
XceI RCATGY 5 cut(s) 203, 1484, 1501, 2868, 3359
XcmI CCANNNNNNNNNTGG 1 cut(s) 586
XmiI GTMKAC 2 cut(s) 2488, 2869
XmnI GAANNNNTTC 1 cut(s) 3039
XspI CTAG 7 cut(s) 405, 1869, 2084, 2537, 2792, 3218, 3392
ZraI GACGTC 1 cut(s) 3054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.