Rorug04G0180800

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
31672172 .. 31673004
833 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0180800.1

Sequence Viewer

Length: 744 bp
ATGGAGCTCCAAACCCCGCAACAAATGGAACCACAACAACAGCAACCAACAGAGGAGGGAGGAAACACCCAAGCAGCTGGAAGTAGTGCCAACATGGATTTCTGGCGAAGCCGTACCAGGTGGATTCCTACTCCAGAACAAATAAGAATCCTCAAGGATCTTTACTACGTCAAGGGATTTAAGTGCCCAACTACAGAGCACATTCACGAGATCTGCCTCCAGCTGAACCAGTATGGACATGTTGAGGGTAAGAACATTTACTTTTGGTTCCAGAACGTCAGGGCTCGAGAGAAGCAGATGAATAGGTGTAATCAGGCTGCTCCAGTGCCCATGGAAACTAGTTCTCTTGGTACTGGTGGATCCATTGATCTCAATTTTGGGTCCACTGGTTCTACTGGTGCTGGTGGATCCATCGACACCAATTTTGGGCCAGCTGGTGGATCCATTGACATCAATTTTGGGTCCACTAGTTCTACTGATGATGGTAAATCCATTGATCTCAACTTTGGTTCCACCTATTCTACTGGAGGACAAACATCCCTGCAACAACGAGGAGGAGATCACCAGGAGGTTCAAACTCTTCCTCTGTTCCCCGTGCACGGCGAGGACGTCTTTGGTAACCTGAAGGCTACTTCCGAGGAAGGTAGCGCTTTTGGTTGCTATTCTGGTGGCTCAGGCGGTTACCACAATGGCTCAAACGTTTCTCTTGAGCTCAGCCTCAATCCATCCGGAGCTGCTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

247

Amino Acids

26.52

Weight (kDa)

4.91

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 38 - 99 2.4e-09 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 612
AccB7I CCANNNNNTGG 1 cut(s) 437
AccIII TCCGGA 1 cut(s) 728
AciI CCGC 2 cut(s) 17, 678
AclI AACGTT 1 cut(s) 699
AclWI GGATC 7 cut(s) 165, 354, 367, 402, 415, 435, 448
AcuI CTGAAG 1 cut(s) 644
AcyI GRCGYC 1 cut(s) 609
AfaI GTAC 2 cut(s) 115, 352
AfeI AGCGCT 1 cut(s) 649
AfiI CCNNNNNNNGG 3 cut(s) 426, 437, 599
AflIII ACRYGT 1 cut(s) 238
AgsI TTSAA 1 cut(s) 575
AhlI ACTAGT 2 cut(s) 338, 467
AjnI CCWGG 2 cut(s) 116, 564
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AluBI AGCT 6 cut(s) 7, 77, 223, 434, 712, 734
AluI AGCT 6 cut(s) 7, 77, 223, 434, 712, 734
Alw21I GWGCWC 4 cut(s) 9, 201, 600, 714
Alw44I GTGCAC 1 cut(s) 596
AlwI GGATC 7 cut(s) 165, 354, 367, 402, 415, 435, 448
Ama87I CYCGRG 1 cut(s) 285
Aor13HI TCCGGA 1 cut(s) 728
Aor51HI AGCGCT 1 cut(s) 649
AoxI GGCC 1 cut(s) 428
ApaLI GTGCAC 1 cut(s) 596
ApeKI GCWGC 3 cut(s) 74, 317, 734
ArsI GACNNNNNNTTYG 4 cut(s) 407, 439, 440, 472
AspLEI GCGC 1 cut(s) 650
AspS9I GGNCC 3 cut(s) 381, 428, 462
AsuHPI GGTGA 1 cut(s) 554
AvaI CYCGRG 1 cut(s) 285
AvaII GGWCC 2 cut(s) 381, 462
BaeGI GKGCMC 3 cut(s) 188, 330, 600
BamHI GGATCC 3 cut(s) 359, 407, 440
BanII GRGCYC 3 cut(s) 9, 286, 714
BauI CACGAG 1 cut(s) 206
Bbv12I GWGCWC 4 cut(s) 9, 201, 600, 714
BbvI GCAGC 3 cut(s) 86, 304, 721
BccI CCATC 3 cut(s) 419, 476, 733
BceAI ACGGC 2 cut(s) 96, 616
BciT130I CCWGG 2 cut(s) 118, 566
BcuI ACTAGT 2 cut(s) 338, 467
BfaI CTAG 3 cut(s) 339, 468, 742
BfmI CTRYAG 1 cut(s) 192
BfoI RGCGCY 1 cut(s) 651
BglII AGATCT 1 cut(s) 210
BisI GCNGC 3 cut(s) 75, 318, 735
BlpI GCTNAGC 1 cut(s) 713
BlsI GCNGC 3 cut(s) 76, 319, 736
Bme1390I CCNGG 2 cut(s) 118, 566
Bme18I GGWCC 2 cut(s) 381, 462
BmeT110I CYCGRG 1 cut(s) 285
BmgT120I GGNCC 3 cut(s) 381, 428, 462
BmiI GGNNCC 8 cut(s) 30, 269, 361, 382, 409, 442, 463, 511
BmrFI CCNGG 2 cut(s) 118, 566
BpmI CTGGAG 4 cut(s) 117, 203, 306, 546
Bpu10I CCTNAGC 1 cut(s) 673
Bpu1102I GCTNAGC 1 cut(s) 713
BpuEI CTTGAG 2 cut(s) 137, 728
BsaHI GRCGYC 1 cut(s) 609
BsaJI CCNNGG 2 cut(s) 330, 636
BsaWI WCCGGW 1 cut(s) 728
Bsc4I CCNNNNNNNGG 3 cut(s) 426, 437, 599
Bse1I ACTGG 6 cut(s) 229, 323, 358, 391, 400, 529
BseAI TCCGGA 1 cut(s) 728
BseBI CCWGG 2 cut(s) 118, 566
BseDI CCNNGG 2 cut(s) 330, 636
BseGI GGATG 2 cut(s) 536, 725
BseLI CCNNNNNNNGG 3 cut(s) 426, 437, 599
BseMII CTCAG 2 cut(s) 687, 727
BseNI ACTGG 6 cut(s) 229, 323, 358, 391, 400, 529
BseRI GAGGAG 3 cut(s) 68, 567, 570
BseSI GKGCMC 3 cut(s) 188, 330, 600
BseXI GCAGC 3 cut(s) 86, 304, 721
BshFI GGCC 1 cut(s) 430
BsiHKAI GWGCWC 4 cut(s) 9, 201, 600, 714
BsiHKCI CYCGRG 1 cut(s) 285
BsiSI CCGG 1 cut(s) 729
BslI CCNNNNNNNGG 3 cut(s) 426, 437, 599
BsnI GGCC 1 cut(s) 430
BsoBI CYCGRG 1 cut(s) 285
Bsp1286I GDGCHC 7 cut(s) 9, 188, 201, 286, 330, 600, 714
Bsp13I TCCGGA 1 cut(s) 728
Bsp143I GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
Bsp1720I GCTNAGC 1 cut(s) 713
Bsp19I CCATGG 1 cut(s) 330
BspACI CCGC 2 cut(s) 17, 678
BspANI GGCC 1 cut(s) 430
BspCNI CTCAG 2 cut(s) 686, 726
BspEI TCCGGA 1 cut(s) 728
BspLI GGNNCC 8 cut(s) 30, 269, 361, 382, 409, 442, 463, 511
BspPI GGATC 7 cut(s) 165, 354, 367, 402, 415, 435, 448
BsrI ACTGG 6 cut(s) 229, 323, 358, 391, 400, 529
BssECI CCNNGG 2 cut(s) 330, 636
BssMI GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
BssNI GRCGYC 1 cut(s) 609
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 330
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 2 cut(s) 118, 566
Bst6I CTCTTC 1 cut(s) 585
BstACI GRCGYC 1 cut(s) 609
BstC8I GCNNGC 1 cut(s) 432
BstDEI CTNAG 2 cut(s) 673, 713
BstDSI CCRYGG 1 cut(s) 330
BstEII GGTNACC 2 cut(s) 617, 680
BstF5I GGATG 2 cut(s) 536, 725
BstH2I RGCGCY 1 cut(s) 651
BstHHI GCGC 1 cut(s) 650
BstKTI GATC 8 cut(s) 160, 213, 362, 370, 410, 443, 499, 562
BstMBI GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
BstNI CCWGG 2 cut(s) 118, 566
BstNSI RCATGY 1 cut(s) 242
BstPI GGTNACC 2 cut(s) 617, 680
BstSCI CCNGG 2 cut(s) 116, 564
BstSFI CTRYAG 1 cut(s) 192
BstSLI GKGCMC 3 cut(s) 188, 330, 600
BstV1I GCAGC 3 cut(s) 86, 304, 721
BstX2I RGATCY 5 cut(s) 157, 210, 359, 407, 440
BstXI CCANNNNNNTGG 1 cut(s) 77
BstYI RGATCY 5 cut(s) 157, 210, 359, 407, 440
BsuRI GGCC 1 cut(s) 430
BtgI CCRYGG 1 cut(s) 330
BtsCI GGATG 2 cut(s) 536, 725
BtsIMutI CAGTG 2 cut(s) 330, 384
Cac8I GCNNGC 1 cut(s) 432
CfoI GCGC 1 cut(s) 650
Cfr13I GGNCC 3 cut(s) 381, 428, 462
CsiI ACCWGGT 1 cut(s) 116
Csp6I GTAC 2 cut(s) 114, 351
CviAII CATG 3 cut(s) 94, 239, 331
CviQI GTAC 2 cut(s) 114, 351
DdeI CTNAG 2 cut(s) 673, 713
DpnI GATC 8 cut(s) 159, 212, 361, 369, 409, 442, 498, 561
DpnII GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
Eam1104I CTCTTC 1 cut(s) 585
EarI CTCTTC 1 cut(s) 585
Ecl136II GAGCTC 2 cut(s) 7, 712
Eco130I CCWWGG 1 cut(s) 330
Eco24I GRGCYC 3 cut(s) 9, 286, 714
Eco47I GGWCC 2 cut(s) 381, 462
Eco47III AGCGCT 1 cut(s) 649
Eco53kI GAGCTC 2 cut(s) 7, 712
Eco57I CTGAAG 1 cut(s) 644
Eco88I CYCGRG 1 cut(s) 285
Eco91I GGTNACC 2 cut(s) 617, 680
EcoICRI GAGCTC 2 cut(s) 7, 712
EcoO65I GGTNACC 2 cut(s) 617, 680
EcoRII CCWGG 2 cut(s) 116, 564
EcoT14I CCWWGG 1 cut(s) 330
EcoT38I GRGCYC 3 cut(s) 9, 286, 714
ErhI CCWWGG 1 cut(s) 330
FaeI CATG 3 cut(s) 97, 242, 334
FaiI YATR 4 cut(s) 95, 234, 240, 332
FatI CATG 3 cut(s) 93, 238, 330
FauI CCCGC 1 cut(s) 24
Fnu4HI GCNGC 3 cut(s) 75, 318, 735
FokI GGATG 2 cut(s) 523, 712
FriOI GRGCYC 3 cut(s) 9, 286, 714
Fsp4HI GCNGC 3 cut(s) 75, 318, 735
FspBI CTAG 3 cut(s) 339, 468, 742
GlaI GCGC 1 cut(s) 649
GluI GCNGC 3 cut(s) 75, 318, 735
GsuI CTGGAG 4 cut(s) 117, 203, 306, 546
HaeII RGCGCY 1 cut(s) 651
HaeIII GGCC 1 cut(s) 430
HapII CCGG 1 cut(s) 729
HhaI GCGC 1 cut(s) 650
Hin1I GRCGYC 1 cut(s) 609
Hin1II CATG 3 cut(s) 97, 242, 334
Hin6I GCGC 1 cut(s) 648
HinP1I GCGC 1 cut(s) 648
HinfI GANTC 2 cut(s) 124, 147
HpaII CCGG 1 cut(s) 729
HphI GGTGA 1 cut(s) 554
Hpy166II GTNNAC 3 cut(s) 384, 465, 598
Hpy188I TCNGA 1 cut(s) 637
Hpy188III TCNNGA 6 cut(s) 134, 206, 271, 287, 707, 729
Hpy8I GTNNAC 3 cut(s) 384, 465, 598
HpyAV CCTTC 2 cut(s) 619, 635
HpyCH4IV ACGT 4 cut(s) 168, 276, 609, 699
HpyCH4V TGCA 2 cut(s) 544, 598
HpyF3I CTNAG 2 cut(s) 673, 713
HpySE526I ACGT 4 cut(s) 168, 276, 609, 699
Hsp92I GRCGYC 1 cut(s) 609
Hsp92II CATG 3 cut(s) 97, 242, 334
HspAI GCGC 1 cut(s) 648
Kpn2I TCCGGA 1 cut(s) 728
Kzo9I GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
LmnI GCTCC 4 cut(s) 4, 12, 325, 731
Lsp1109I GCAGC 3 cut(s) 86, 304, 721
MabI ACCWGGT 1 cut(s) 116
MaeI CTAG 3 cut(s) 339, 468, 742
MaeII ACGT 4 cut(s) 168, 276, 609, 699
MaeIII GTNAC 2 cut(s) 617, 680
MalI GATC 8 cut(s) 159, 212, 361, 369, 409, 442, 498, 561
MboI GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
MboII GAAGA 1 cut(s) 572
MflI RGATCY 5 cut(s) 157, 210, 359, 407, 440
MhlI GDGCHC 7 cut(s) 9, 188, 201, 286, 330, 600, 714
MluCI AATT 3 cut(s) 373, 421, 454
MroI TCCGGA 1 cut(s) 728
MseI TTAA 1 cut(s) 180
MspA1I CMGCKG 3 cut(s) 77, 223, 434
MspI CCGG 1 cut(s) 729
MspR9I CCNGG 2 cut(s) 118, 566
MvaI CCWGG 2 cut(s) 118, 566
NcoI CCATGG 1 cut(s) 330
NdeII GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
NlaIII CATG 3 cut(s) 97, 242, 334
NlaIV GGNNCC 8 cut(s) 30, 269, 361, 382, 409, 442, 463, 511
NspI RCATGY 1 cut(s) 242
PaeR7I CTCGAG 1 cut(s) 285
PciI ACATGT 1 cut(s) 238
PcsI WCGNNNNNNNCGW 1 cut(s) 606
PfeI GAWTC 2 cut(s) 124, 147
PflMI CCANNNNNTGG 1 cut(s) 437
PkrI GCNGC 3 cut(s) 76, 319, 736
PscI ACATGT 1 cut(s) 238
Psp124BI GAGCTC 2 cut(s) 9, 714
Psp1406I AACGTT 1 cut(s) 699
Psp6I CCWGG 2 cut(s) 116, 564
PspEI GGTNACC 2 cut(s) 617, 680
PspGI CCWGG 2 cut(s) 116, 564
PspN4I GGNNCC 8 cut(s) 30, 269, 361, 382, 409, 442, 463, 511
PspPI GGNCC 3 cut(s) 381, 428, 462
PsuI RGATCY 5 cut(s) 157, 210, 359, 407, 440
PvuII CAGCTG 3 cut(s) 77, 223, 434
RsaI GTAC 2 cut(s) 115, 352
RsaNI GTAC 2 cut(s) 114, 351
SacI GAGCTC 2 cut(s) 9, 714
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 3 cut(s) 75, 318, 735
Sau3AI GATC 8 cut(s) 157, 210, 359, 367, 407, 440, 496, 559
Sau96I GGNCC 3 cut(s) 381, 428, 462
ScrFI CCNGG 2 cut(s) 118, 566
SduI GDGCHC 7 cut(s) 9, 188, 201, 286, 330, 600, 714
SexAI ACCWGGT 1 cut(s) 116
SfcI CTRYAG 1 cut(s) 192
Sfr274I CTCGAG 1 cut(s) 285
SinI GGWCC 2 cut(s) 381, 462
SlaI CTCGAG 1 cut(s) 285
SmlI CTYRAG 3 cut(s) 152, 285, 707
SmoI CTYRAG 3 cut(s) 152, 285, 707
SpeI ACTAGT 2 cut(s) 338, 467
Sse9I AATT 3 cut(s) 373, 421, 454
SsiI CCGC 2 cut(s) 17, 678
SspMI CTAG 3 cut(s) 339, 468, 742
SstI GAGCTC 2 cut(s) 9, 714
StyD4I CCNGG 2 cut(s) 116, 564
StyI CCWWGG 1 cut(s) 330
TaiI ACGT 4 cut(s) 171, 279, 612, 702
TaqI TCGA 2 cut(s) 286, 414
TasI AATT 3 cut(s) 373, 421, 454
TfiI GAWTC 2 cut(s) 124, 147
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TscAI CASTG 2 cut(s) 330, 391
TseI GCWGC 3 cut(s) 74, 317, 734
TspDTI ATGAA 1 cut(s) 314
TspRI CASTG 2 cut(s) 330, 391
Van91I CCANNNNNTGG 1 cut(s) 437
VneI GTGCAC 1 cut(s) 596
VpaK11BI GGWCC 2 cut(s) 381, 462
XceI RCATGY 1 cut(s) 242
XhoI CTCGAG 1 cut(s) 285
XspI CTAG 3 cut(s) 339, 468, 742
ZraI GACGTC 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.