disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 15 - 101 | 1.3e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 177 - 252 | 4e-16 | NB-ARC domain |
| nSTAND3 | PF20720 | 198 - 319 | 9.9e-06 | Novel STAND NTPase 3 |
| NB-ARC | PF00931 | 249 - 328 | 5.1e-13 | NB-ARC domain |
| WHD_DRP | PF23559 | 421 - 490 | 2.6e-21 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 530 - 791 | 1.3e-35 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 550 - 606 | 4e-06 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 657 - 784 | 1.4e-33 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 847 - 1058 | 3.6e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 1109 - 1205 | 2.8e-07 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1129 - 1187 | 2.5e-07 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 968 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 180 |
| Acc16I | TGCGCA | 1 cut(s) | 3052 |
| Acc36I | ACCTGC | 1 cut(s) | 670 |
| Acc65I | GGTACC | 1 cut(s) | 1060 |
| AccB1I | GGYRCC | 2 cut(s) | 418, 1060 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2573 |
| AccBSI | CCGCTC | 1 cut(s) | 3003 |
| AccI | GTMKAC | 1 cut(s) | 1540 |
| AccII | CGCG | 3 cut(s) | 2466, 2817, 2883 |
| AccIII | TCCGGA | 1 cut(s) | 2955 |
| AclWI | GGATC | 2 cut(s) | 174, 1285 |
| AcoI | YGGCCR | 3 cut(s) | 600, 2653, 2722 |
| AcsI | RAATTY | 7 cut(s) | 11, 847, 985, 1693, 1886, 2379, 3651 |
| AcuI | CTGAAG | 5 cut(s) | 252, 1182, 1730, 2018, 3140 |
| AfaI | GTAC | 6 cut(s) | 318, 653, 673, 1062, 1439, 2148 |
| AfeI | AGCGCT | 3 cut(s) | 160, 1493, 1755 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1999, 2309, 2539, 2573 |
| AflII | CTTAAG | 3 cut(s) | 407, 1657, 2185 |
| AflIII | ACRYGT | 3 cut(s) | 1525, 1563, 3037 |
| AjnI | CCWGG | 1 cut(s) | 1611 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 504, 536, 1563, 1595 |
| AleI | CACNNNNGTG | 1 cut(s) | 893 |
| Alw21I | GWGCWC | 3 cut(s) | 21, 57, 783 |
| Alw26I | GTCTC | 5 cut(s) | 166, 1131, 2417, 3337, 3372 |
| AlwI | GGATC | 2 cut(s) | 174, 1285 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2686 |
| Aor13HI | TCCGGA | 1 cut(s) | 2955 |
| Aor51HI | AGCGCT | 3 cut(s) | 160, 1493, 1755 |
| ApeKI | GCWGC | 8 cut(s) | 5, 29, 156, 161, 292, 864, 2595, 3240 |
| ApoI | RAATTY | 7 cut(s) | 11, 847, 985, 1693, 1886, 2379, 3651 |
| Asp718I | GGTACC | 1 cut(s) | 1060 |
| AspLEI | GCGC | 7 cut(s) | 161, 370, 1098, 1494, 1593, 1756, 3053 |
| AspS9I | GGNCC | 9 cut(s) | 403, 960, 1615, 2800, 2866, 2941, 3272, 3286, 3621 |
| AsuC2I | CCSGG | 1 cut(s) | 858 |
| AsuHPI | GGTGA | 4 cut(s) | 515, 868, 2219, 3535 |
| AvaII | GGWCC | 5 cut(s) | 403, 960, 1615, 3272, 3286 |
| BalI | TGGCCA | 3 cut(s) | 602, 2655, 2724 |
| BanI | GGYRCC | 2 cut(s) | 418, 1060 |
| BauI | CACGAG | 3 cut(s) | 2412, 3078, 3473 |
| BbsI | GAAGAC | 4 cut(s) | 240, 537, 635, 2095 |
| Bbv12I | GWGCWC | 3 cut(s) | 21, 57, 783 |
| BbvCI | CCTCAGC | 1 cut(s) | 33 |
| BbvI | GCAGC | 8 cut(s) | 16, 17, 148, 168, 279, 851, 2607, 3227 |
| BciT130I | CCWGG | 1 cut(s) | 1613 |
| BciVI | GTATCC | 2 cut(s) | 718, 3656 |
| BclI | TGATCA | 2 cut(s) | 561, 1848 |
| BcnI | CCSGG | 1 cut(s) | 858 |
| BcoDI | GTCTC | 5 cut(s) | 166, 1131, 2417, 3337, 3372 |
| BfmI | CTRYAG | 3 cut(s) | 2593, 2678, 2747 |
| BfoI | RGCGCY | 3 cut(s) | 162, 1495, 1757 |
| BfrI | CTTAAG | 3 cut(s) | 407, 1657, 2185 |
| BfuAI | ACCTGC | 1 cut(s) | 670 |
| BfuI | GTATCC | 2 cut(s) | 718, 3656 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2799, 2865 |
| BlpI | GCTNAGC | 1 cut(s) | 3236 |
| Bme1390I | CCNGG | 2 cut(s) | 858, 1613 |
| Bme18I | GGWCC | 5 cut(s) | 403, 960, 1615, 3272, 3286 |
| BmgT120I | GGNCC | 9 cut(s) | 403, 960, 1615, 2800, 2866, 2941, 3272, 3286, 3621 |
| BmiI | GGNNCC | 5 cut(s) | 98, 420, 1062, 1215, 1617 |
| BmrFI | CCNGG | 2 cut(s) | 858, 1613 |
| BmrI | ACTGGG | 1 cut(s) | 632 |
| BmsI | GCATC | 7 cut(s) | 1000, 1827, 1870, 2612, 2830, 3476, 3584 |
| BmuI | ACTGGG | 1 cut(s) | 632 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2429 |
| BpiI | GAAGAC | 4 cut(s) | 240, 537, 635, 2095 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2855, 2887 |
| BpmI | CTGGAG | 5 cut(s) | 131, 1232, 1304, 1907, 3275 |
| Bpu10I | CCTNAGC | 2 cut(s) | 33, 3357 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3236 |
| BpuEI | CTTGAG | 7 cut(s) | 1084, 1293, 1738, 1876, 3047, 3347, 3491 |
| BpuMI | CCSGG | 1 cut(s) | 858 |
| BsaAI | YACGTR | 2 cut(s) | 1535, 3644 |
| BsaJI | CCNNGG | 3 cut(s) | 48, 1065, 3600 |
| BsaWI | WCCGGW | 1 cut(s) | 2955 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3069, 3099, 3185, 3215 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1999, 2309, 2539, 2573 |
| Bse118I | RCCGGY | 1 cut(s) | 3608 |
| Bse1I | ACTGG | 3 cut(s) | 114, 627, 1366 |
| Bse3DI | GCAATG | 5 cut(s) | 1653, 1793, 2665, 2734, 3537 |
| BseAI | TCCGGA | 1 cut(s) | 2955 |
| BseBI | CCWGG | 1 cut(s) | 1613 |
| BseDI | CCNNGG | 3 cut(s) | 48, 1065, 3600 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1999, 2309, 2539, 2573 |
| BseMI | GCAATG | 5 cut(s) | 1653, 1793, 2665, 2734, 3537 |
| BseMII | CTCAG | 7 cut(s) | 24, 133, 918, 1035, 2163, 3227, 3473 |
| BseNI | ACTGG | 3 cut(s) | 114, 627, 1366 |
| BseRI | GAGGAG | 2 cut(s) | 815, 2558 |
| BseXI | GCAGC | 8 cut(s) | 16, 17, 148, 168, 279, 851, 2607, 3227 |
| BseYI | CCCAGC | 2 cut(s) | 2123, 3454 |
| BsgI | GTGCAG | 1 cut(s) | 3001 |
| Bsh1236I | CGCG | 3 cut(s) | 2466, 2817, 2883 |
| BshNI | GGYRCC | 2 cut(s) | 418, 1060 |
| BsiHKAI | GWGCWC | 3 cut(s) | 21, 57, 783 |
| BsiSI | CCGG | 4 cut(s) | 858, 1892, 2956, 3609 |
| BslFI | GGGAC | 3 cut(s) | 1601, 1923, 2222 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1999, 2309, 2539, 2573 |
| BsmAI | GTCTC | 5 cut(s) | 166, 1131, 2417, 3337, 3372 |
| BsmBI | CGTCTC | 1 cut(s) | 2417 |
| BsmFI | GGGAC | 3 cut(s) | 1601, 1923, 2222 |
| BsmI | GAATGC | 2 cut(s) | 1806, 2460 |
| Bsp1286I | GDGCHC | 3 cut(s) | 21, 57, 783 |
| Bsp13I | TCCGGA | 1 cut(s) | 2955 |
| Bsp1407I | TGTACA | 2 cut(s) | 651, 671 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3236 |
| BspCNI | CTCAG | 7 cut(s) | 25, 132, 919, 1036, 2164, 3228, 3474 |
| BspEI | TCCGGA | 1 cut(s) | 2955 |
| BspFNI | CGCG | 3 cut(s) | 2466, 2817, 2883 |
| BspHI | TCATGA | 2 cut(s) | 1179, 1345 |
| BspLI | GGNNCC | 5 cut(s) | 98, 420, 1062, 1215, 1617 |
| BspMAI | CTGCAG | 1 cut(s) | 2597 |
| BspMI | ACCTGC | 1 cut(s) | 670 |
| BspPI | GGATC | 2 cut(s) | 174, 1285 |
| BspT107I | GGYRCC | 2 cut(s) | 418, 1060 |
| BspTI | CTTAAG | 3 cut(s) | 407, 1657, 2185 |
| BsrBI | CCGCTC | 1 cut(s) | 3003 |
| BsrDI | GCAATG | 5 cut(s) | 1653, 1793, 2665, 2734, 3537 |
| BsrFI | RCCGGY | 1 cut(s) | 3608 |
| BsrGI | TGTACA | 2 cut(s) | 651, 671 |
| BsrI | ACTGG | 3 cut(s) | 114, 627, 1366 |
| BssAI | RCCGGY | 1 cut(s) | 3608 |
| BssECI | CCNNGG | 3 cut(s) | 48, 1065, 3600 |
| BssSI | CACGAG | 3 cut(s) | 2412, 3078, 3473 |
| BssT1I | CCWWGG | 3 cut(s) | 48, 1065, 3600 |
| Bst2BI | CACGAG | 3 cut(s) | 2412, 3078, 3473 |
| Bst2UI | CCWGG | 1 cut(s) | 1613 |
| Bst4CI | ACNGT | 7 cut(s) | 126, 139, 1333, 1579, 2322, 2688, 3497 |
| Bst6I | CTCTTC | 7 cut(s) | 64, 744, 758, 1677, 2064, 2878, 3375 |
| BstAFI | CTTAAG | 3 cut(s) | 407, 1657, 2185 |
| BstAUI | TGTACA | 2 cut(s) | 651, 671 |
| BstBAI | YACGTR | 2 cut(s) | 1535, 3644 |
| BstC8I | GCNNGC | 3 cut(s) | 1706, 1775, 2058 |
| BstFNI | CGCG | 3 cut(s) | 2466, 2817, 2883 |
| BstH2I | RGCGCY | 3 cut(s) | 162, 1495, 1757 |
| BstHHI | GCGC | 7 cut(s) | 161, 370, 1098, 1494, 1593, 1756, 3053 |
| BstMAI | GTCTC | 5 cut(s) | 166, 1131, 2417, 3337, 3372 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 236, 1095, 2057, 2799, 2865, 3059 |
| BstNI | CCWGG | 1 cut(s) | 1613 |
| BstNSI | RCATGY | 3 cut(s) | 1529, 1567, 3041 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2429 |
| BstSCI | CCNGG | 2 cut(s) | 856, 1611 |
| BstSFI | CTRYAG | 3 cut(s) | 2593, 2678, 2747 |
| BstUI | CGCG | 3 cut(s) | 2466, 2817, 2883 |
| BstV1I | GCAGC | 8 cut(s) | 16, 17, 148, 168, 279, 851, 2607, 3227 |
| BstV2I | GAAGAC | 4 cut(s) | 240, 537, 635, 2095 |
| BsuI | GTATCC | 2 cut(s) | 718, 3656 |
| BtgZI | GCGATG | 2 cut(s) | 1203, 2487 |
| BtsIMutI | CAGTG | 2 cut(s) | 654, 2169 |
| BveI | ACCTGC | 1 cut(s) | 670 |
| Cac8I | GCNNGC | 3 cut(s) | 1706, 1775, 2058 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2686 |
| CciI | TCATGA | 2 cut(s) | 1179, 1345 |
| CfoI | GCGC | 7 cut(s) | 161, 370, 1098, 1494, 1593, 1756, 3053 |
| Cfr10I | RCCGGY | 1 cut(s) | 3608 |
| Cfr13I | GGNCC | 9 cut(s) | 403, 960, 1615, 2800, 2866, 2941, 3272, 3286, 3621 |
| CseI | GACGC | 2 cut(s) | 245, 542 |
| CsiI | ACCWGGT | 1 cut(s) | 1611 |
| Csp6I | GTAC | 6 cut(s) | 317, 652, 672, 1061, 1438, 2147 |
| CviQI | GTAC | 6 cut(s) | 317, 652, 672, 1061, 1438, 2147 |
| DraI | TTTAAA | 1 cut(s) | 984 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 180 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 180 |
| EaeI | YGGCCR | 3 cut(s) | 600, 2653, 2722 |
| Eam1104I | CTCTTC | 7 cut(s) | 64, 744, 758, 1677, 2064, 2878, 3375 |
| EarI | CTCTTC | 7 cut(s) | 64, 744, 758, 1677, 2064, 2878, 3375 |
| EciI | GGCGGA | 1 cut(s) | 2060 |
| Eco130I | CCWWGG | 3 cut(s) | 48, 1065, 3600 |
| Eco32I | GATATC | 1 cut(s) | 1724 |
| Eco47I | GGWCC | 5 cut(s) | 403, 960, 1615, 3272, 3286 |
| Eco47III | AGCGCT | 3 cut(s) | 160, 1493, 1755 |
| Eco57I | CTGAAG | 5 cut(s) | 252, 1182, 1730, 2018, 3140 |
| EcoO109I | RGGNCCY | 6 cut(s) | 1615, 2800, 2866, 2941, 3272, 3286 |
| EcoRI | GAATTC | 1 cut(s) | 847 |
| EcoRII | CCWGG | 1 cut(s) | 1611 |
| EcoRV | GATATC | 1 cut(s) | 1724 |
| EcoT14I | CCWWGG | 3 cut(s) | 48, 1065, 3600 |
| EcoT22I | ATGCAT | 6 cut(s) | 2355, 2641, 2710, 2779, 2845, 2911 |
| ErhI | CCWWGG | 3 cut(s) | 48, 1065, 3600 |
| Esp3I | CGTCTC | 1 cut(s) | 2417 |
| FaqI | GGGAC | 3 cut(s) | 1601, 1923, 2222 |
| FauI | CCCGC | 3 cut(s) | 1644, 2459, 2996 |
| FauNDI | CATATG | 1 cut(s) | 668 |
| FbaI | TGATCA | 2 cut(s) | 561, 1848 |
| FblI | GTMKAC | 1 cut(s) | 1540 |
| FspI | TGCGCA | 1 cut(s) | 3052 |
| GlaI | GCGC | 7 cut(s) | 160, 369, 1097, 1493, 1592, 1755, 3052 |
| GsaI | CCCAGC | 2 cut(s) | 2127, 3458 |
| GsuI | CTGGAG | 5 cut(s) | 131, 1232, 1304, 1907, 3275 |
| HaeII | RGCGCY | 3 cut(s) | 162, 1495, 1757 |
| HapII | CCGG | 4 cut(s) | 858, 1892, 2956, 3609 |
| HgaI | GACGC | 2 cut(s) | 245, 542 |
| HhaI | GCGC | 7 cut(s) | 161, 370, 1098, 1494, 1593, 1756, 3053 |
| Hin6I | GCGC | 7 cut(s) | 159, 368, 1096, 1492, 1591, 1754, 3051 |
| HinP1I | GCGC | 7 cut(s) | 159, 368, 1096, 1492, 1591, 1754, 3051 |
| HincII | GTYRAC | 4 cut(s) | 900, 1541, 2010, 2550 |
| HindII | GTYRAC | 4 cut(s) | 900, 1541, 2010, 2550 |
| HindIII | AAGCTT | 1 cut(s) | 1823 |
| HpaI | GTTAAC | 1 cut(s) | 2010 |
| HpaII | CCGG | 4 cut(s) | 858, 1892, 2956, 3609 |
| HphI | GGTGA | 4 cut(s) | 515, 868, 2219, 3535 |
| Hpy188I | TCNGA | 9 cut(s) | 45, 122, 171, 278, 571, 741, 1570, 1675, 2025 |
| Hpy99I | CGWCG | 2 cut(s) | 559, 2512 |
| HpyCH4III | ACNGT | 7 cut(s) | 126, 139, 1333, 1579, 2322, 2688, 3497 |
| HpyCH4IV | ACGT | 4 cut(s) | 557, 1534, 3418, 3643 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 236, 1095, 2057, 2799, 2865, 3059 |
| HpySE526I | ACGT | 4 cut(s) | 557, 1534, 3418, 3643 |
| HspAI | GCGC | 7 cut(s) | 159, 368, 1096, 1492, 1591, 1754, 3051 |
| Kpn2I | TCCGGA | 1 cut(s) | 2955 |
| KpnI | GGTACC | 1 cut(s) | 1064 |
| Ksp22I | TGATCA | 2 cut(s) | 561, 1848 |
| KspAI | GTTAAC | 1 cut(s) | 2010 |
| LmnI | GCTCC | 4 cut(s) | 289, 572, 1213, 1354 |
| Lsp1109I | GCAGC | 8 cut(s) | 16, 17, 148, 168, 279, 851, 2607, 3227 |
| LweI | GCATC | 7 cut(s) | 1000, 1827, 1870, 2612, 2830, 3476, 3584 |
| MabI | ACCWGGT | 1 cut(s) | 1611 |
| MaeII | ACGT | 4 cut(s) | 557, 1534, 3418, 3643 |
| MaeIII | GTNAC | 4 cut(s) | 538, 550, 874, 1573 |
| MbiI | CCGCTC | 1 cut(s) | 3003 |
| MfeI | CAATTG | 2 cut(s) | 903, 1767 |
| MhlI | GDGCHC | 3 cut(s) | 21, 57, 783 |
| MlsI | TGGCCA | 3 cut(s) | 602, 2655, 2724 |
| MluNI | TGGCCA | 3 cut(s) | 602, 2655, 2724 |
| MlyI | GAGTC | 5 cut(s) | 628, 2151, 2244, 3090, 3287 |
| MmeI | TCCRAC | 4 cut(s) | 301, 502, 594, 2157 |
| Mox20I | TGGCCA | 3 cut(s) | 602, 2655, 2724 |
| Mph1103I | ATGCAT | 6 cut(s) | 2355, 2641, 2710, 2779, 2845, 2911 |
| MroI | TCCGGA | 1 cut(s) | 2955 |
| MscI | TGGCCA | 3 cut(s) | 602, 2655, 2724 |
| MslI | CAYNNNNRTG | 2 cut(s) | 893, 1866 |
| Msp20I | TGGCCA | 3 cut(s) | 602, 2655, 2724 |
| MspA1I | CMGCKG | 1 cut(s) | 8 |
| MspCI | CTTAAG | 3 cut(s) | 407, 1657, 2185 |
| MspI | CCGG | 4 cut(s) | 858, 1892, 2956, 3609 |
| MspR9I | CCNGG | 2 cut(s) | 858, 1613 |
| MunI | CAATTG | 2 cut(s) | 903, 1767 |
| Mva1269I | GAATGC | 2 cut(s) | 1806, 2460 |
| MvaI | CCWGG | 1 cut(s) | 1613 |
| MvnI | CGCG | 3 cut(s) | 2466, 2817, 2883 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 236, 1095, 2057, 2799, 2865, 3059 |
| NciI | CCSGG | 1 cut(s) | 858 |
| NdeI | CATATG | 1 cut(s) | 668 |
| NlaIV | GGNNCC | 5 cut(s) | 98, 420, 1062, 1215, 1617 |
| NmuCI | GTSAC | 2 cut(s) | 538, 874 |
| NsbI | TGCGCA | 1 cut(s) | 3052 |
| NsiI | ATGCAT | 6 cut(s) | 2355, 2641, 2710, 2779, 2845, 2911 |
| NspI | RCATGY | 3 cut(s) | 1529, 1567, 3041 |
| OliI | CACNNNNGTG | 1 cut(s) | 893 |
| PagI | TCATGA | 2 cut(s) | 1179, 1345 |
| PciI | ACATGT | 3 cut(s) | 1525, 1563, 3037 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 469, 2157 |
| PctI | GAATGC | 2 cut(s) | 1806, 2460 |
| PfeI | GAWTC | 6 cut(s) | 40, 392, 452, 485, 1746, 2623 |
| PflFI | GACNNNGTC | 2 cut(s) | 1613, 1930 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2573 |
| PfoI | TCCNGGA | 1 cut(s) | 856 |
| PleI | GAGTC | 5 cut(s) | 628, 2151, 2243, 3089, 3287 |
| PpsI | GAGTC | 5 cut(s) | 628, 2151, 2243, 3089, 3287 |
| Ppu21I | YACGTR | 2 cut(s) | 1535, 3644 |
| PpuMI | RGGWCCY | 3 cut(s) | 1615, 3272, 3286 |
| PscI | ACATGT | 3 cut(s) | 1525, 1563, 3037 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2429 |
| PsiI | TTATAA | 1 cut(s) | 968 |
| Psp5II | RGGWCCY | 3 cut(s) | 1615, 3272, 3286 |
| Psp6I | CCWGG | 1 cut(s) | 1611 |
| PspFI | CCCAGC | 2 cut(s) | 2123, 3454 |
| PspGI | CCWGG | 1 cut(s) | 1611 |
| PspN4I | GGNNCC | 5 cut(s) | 98, 420, 1062, 1215, 1617 |
| PspPI | GGNCC | 9 cut(s) | 403, 960, 1615, 2800, 2866, 2941, 3272, 3286, 3621 |
| PspPPI | RGGWCCY | 3 cut(s) | 1615, 3272, 3286 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2289, 2321 |
| PstI | CTGCAG | 1 cut(s) | 2597 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2686 |
| PsyI | GACNNNGTC | 2 cut(s) | 1613, 1930 |
| PvuII | CAGCTG | 1 cut(s) | 8 |
| RsaI | GTAC | 6 cut(s) | 318, 653, 673, 1062, 1439, 2148 |
| RsaNI | GTAC | 6 cut(s) | 317, 652, 672, 1061, 1438, 2147 |
| RseI | CAYNNNNRTG | 2 cut(s) | 893, 1866 |
| SalI | GTCGAC | 1 cut(s) | 1539 |
| Sau96I | GGNCC | 9 cut(s) | 403, 960, 1615, 2800, 2866, 2941, 3272, 3286, 3621 |
| SchI | GAGTC | 5 cut(s) | 628, 2151, 2244, 3090, 3287 |
| ScrFI | CCNGG | 2 cut(s) | 858, 1613 |
| SduI | GDGCHC | 3 cut(s) | 21, 57, 783 |
| SexAI | ACCWGGT | 1 cut(s) | 1611 |
| SfaNI | GCATC | 7 cut(s) | 1000, 1827, 1870, 2612, 2830, 3476, 3584 |
| SfcI | CTRYAG | 3 cut(s) | 2593, 2678, 2747 |
| SfiI | GGCCNNNNNGGCC | 2 cut(s) | 2799, 2865 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3608 |
| SinI | GGWCC | 5 cut(s) | 403, 960, 1615, 3272, 3286 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 893, 1866 |
| StyD4I | CCNGG | 2 cut(s) | 856, 1611 |
| StyI | CCWWGG | 3 cut(s) | 48, 1065, 3600 |
| TaaI | ACNGT | 7 cut(s) | 126, 139, 1333, 1579, 2322, 2688, 3497 |
| TaiI | ACGT | 4 cut(s) | 560, 1537, 3421, 3646 |
| TatI | WGTACW | 4 cut(s) | 651, 671, 1437, 2146 |
| TauI | GCSGC | 2 cut(s) | 71, 2286 |
| TfiI | GAWTC | 6 cut(s) | 40, 392, 452, 485, 1746, 2623 |
| TscAI | CASTG | 2 cut(s) | 654, 2176 |
| TseFI | GTSAC | 2 cut(s) | 538, 874 |
| TseI | GCWGC | 8 cut(s) | 5, 29, 156, 161, 292, 864, 2595, 3240 |
| Tsp45I | GTSAC | 2 cut(s) | 538, 874 |
| TspGWI | ACGGA | 1 cut(s) | 3086 |
| TspRI | CASTG | 2 cut(s) | 654, 2176 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1613, 1930 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2573 |
| Vha464I | CTTAAG | 3 cut(s) | 407, 1657, 2185 |
| VpaK11BI | GGWCC | 5 cut(s) | 403, 960, 1615, 3272, 3286 |
| XapI | RAATTY | 7 cut(s) | 11, 847, 985, 1693, 1886, 2379, 3651 |
| XbaI | TCTAGA | 1 cut(s) | 1726 |
| XceI | RCATGY | 3 cut(s) | 1529, 1567, 3041 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 610 |
| XmiI | GTMKAC | 1 cut(s) | 1540 |
| Zsp2I | ATGCAT | 6 cut(s) | 2355, 2641, 2710, 2779, 2845, 2911 |