disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 14 - 100 | 4.6e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 174 - 346 | 7.4e-34 | NB-ARC domain |
| NACHT | PF05729 | 196 - 337 | 1.6e-07 | NACHT domain |
| WHD_DRP | PF23559 | 438 - 507 | 9.7e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 546 - 802 | 1.5e-32 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 673 - 798 | 2.2e-33 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 853 - 983 | 8.3e-08 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 898 - 1167 | 6.1e-09 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 949 - 1076 | 3.6e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 995 - 1121 | 1.8e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 1246 - 1412 | 6.5e-09 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1327 - 1379 | 4.9e-07 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1022 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 52 |
| Acc36I | ACCTGC | 1 cut(s) | 661 |
| Acc65I | GGTACC | 1 cut(s) | 1114 |
| AccB1I | GGYRCC | 2 cut(s) | 415, 1114 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2615, 3727 |
| AccBSI | CCGCTC | 1 cut(s) | 3252 |
| AccI | GTMKAC | 3 cut(s) | 738, 3586, 4096 |
| AccII | CGCG | 3 cut(s) | 2655, 2790, 3063 |
| AccIII | TCCGGA | 1 cut(s) | 1971 |
| AclWI | GGATC | 3 cut(s) | 171, 1235, 1336 |
| AcoI | YGGCCR | 6 cut(s) | 591, 2695, 2830, 2899, 2968, 3103 |
| AcsI | RAATTY | 8 cut(s) | 11, 901, 1039, 1741, 1934, 2421, 2502, 3770 |
| AcuI | CTGAAG | 4 cut(s) | 1233, 1778, 2066, 3467 |
| AfeI | AGCGCT | 2 cut(s) | 157, 1544 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 280, 659, 2047, 2351, 2581, 2615, 3727, 3862 |
| AflII | CTTAAG | 2 cut(s) | 404, 1705 |
| AflIII | ACRYGT | 3 cut(s) | 1576, 1611, 4144 |
| AjnI | CCWGG | 1 cut(s) | 751 |
| AleI | CACNNNNGTG | 2 cut(s) | 947, 2514 |
| Alw21I | GWGCWC | 2 cut(s) | 21, 837 |
| Alw26I | GTCTC | 7 cut(s) | 163, 1182, 2459, 3696, 3919, 3954, 4013 |
| AlwI | GGATC | 3 cut(s) | 171, 1235, 1336 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2932 |
| Ama87I | CYCGRG | 1 cut(s) | 180 |
| Aor13HI | TCCGGA | 1 cut(s) | 1971 |
| Aor51HI | AGCGCT | 2 cut(s) | 157, 1544 |
| ApoI | RAATTY | 8 cut(s) | 11, 901, 1039, 1741, 1934, 2421, 2502, 3770 |
| AseI | ATTAAT | 1 cut(s) | 384 |
| Asp718I | GGTACC | 1 cut(s) | 1114 |
| AspLEI | GCGC | 5 cut(s) | 158, 367, 1152, 1545, 1641 |
| AsuC2I | CCSGG | 4 cut(s) | 912, 3206, 3464, 3686 |
| AsuHPI | GGTGA | 4 cut(s) | 512, 922, 2261, 4117 |
| AsuII | TTCGAA | 1 cut(s) | 1320 |
| AsuNHI | GCTAGC | 2 cut(s) | 1160, 3514 |
| AvaI | CYCGRG | 1 cut(s) | 180 |
| AvaII | GGWCC | 5 cut(s) | 123, 1014, 1204, 1663, 3868 |
| BaeGI | GKGCMC | 1 cut(s) | 188 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1707, 1740 |
| BalI | TGGCCA | 6 cut(s) | 593, 2697, 2832, 2901, 2970, 3105 |
| BanI | GGYRCC | 2 cut(s) | 415, 1114 |
| BauI | CACGAG | 4 cut(s) | 2454, 3327, 3396, 4055 |
| BbsI | GAAGAC | 4 cut(s) | 48, 237, 626, 2143 |
| Bbv12I | GWGCWC | 2 cut(s) | 21, 837 |
| BbvCI | CCTCAGC | 1 cut(s) | 33 |
| BceAI | ACGGC | 1 cut(s) | 2499 |
| BciT130I | CCWGG | 1 cut(s) | 753 |
| BciVI | GTATCC | 1 cut(s) | 709 |
| BclI | TGATCA | 2 cut(s) | 552, 1896 |
| BcnI | CCSGG | 4 cut(s) | 912, 3206, 3464, 3686 |
| BcoDI | GTCTC | 7 cut(s) | 163, 1182, 2459, 3696, 3919, 3954, 4013 |
| BfmI | CTRYAG | 6 cut(s) | 2157, 2635, 2855, 2924, 2993, 3128 |
| BfoI | RGCGCY | 2 cut(s) | 159, 1546 |
| BfrI | CTTAAG | 2 cut(s) | 404, 1705 |
| BfuAI | ACCTGC | 1 cut(s) | 661 |
| BfuI | GTATCC | 1 cut(s) | 709 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2772, 3045 |
| BlpI | GCTNAGC | 1 cut(s) | 3818 |
| Bme1390I | CCNGG | 5 cut(s) | 753, 912, 3206, 3464, 3686 |
| Bme18I | GGWCC | 5 cut(s) | 123, 1014, 1204, 1663, 3868 |
| BmeT110I | CYCGRG | 1 cut(s) | 180 |
| BmiI | GGNNCC | 6 cut(s) | 95, 417, 1116, 1205, 1266, 1665 |
| BmrFI | CCNGG | 5 cut(s) | 753, 912, 3206, 3464, 3686 |
| BmrI | ACTGGG | 1 cut(s) | 623 |
| BmtI | GCTAGC | 2 cut(s) | 1164, 3518 |
| BmuI | ACTGGG | 1 cut(s) | 623 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2471 |
| BpiI | GAAGAC | 4 cut(s) | 48, 237, 626, 2143 |
| BpmI | CTGGAG | 6 cut(s) | 128, 1283, 1355, 3716, 3749, 3857 |
| Bpu10I | CCTNAGC | 2 cut(s) | 33, 3939 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3818 |
| Bpu14I | TTCGAA | 1 cut(s) | 1320 |
| BpuEI | CTTGAG | 8 cut(s) | 1138, 1344, 1786, 1924, 3296, 3575, 3929, 4073 |
| BpuMI | CCSGG | 4 cut(s) | 912, 3206, 3464, 3686 |
| BsaAI | YACGTR | 1 cut(s) | 4145 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3543 |
| BsaJI | CCNNGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| BsaWI | WCCGGW | 1 cut(s) | 1971 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 3318, 3348, 3387, 3417, 3830, 3860 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 280, 659, 2047, 2351, 2581, 2615, 3727, 3862 |
| Bse1I | ACTGG | 4 cut(s) | 111, 191, 618, 1417 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3543 |
| BseAI | TCCGGA | 1 cut(s) | 1971 |
| BseBI | CCWGG | 1 cut(s) | 753 |
| BseDI | CCNNGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| BseJI | GATNNNNATC | 1 cut(s) | 3543 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 280, 659, 2047, 2351, 2581, 2615, 3727, 3862 |
| BseMII | CTCAG | 5 cut(s) | 24, 130, 788, 972, 3809 |
| BseNI | ACTGG | 4 cut(s) | 111, 191, 618, 1417 |
| BseRI | GAGGAG | 3 cut(s) | 818, 2600, 3572 |
| BseSI | GKGCMC | 1 cut(s) | 188 |
| BseYI | CCCAGC | 1 cut(s) | 4036 |
| BsgI | GTGCAG | 1 cut(s) | 3250 |
| Bsh1236I | CGCG | 3 cut(s) | 2655, 2790, 3063 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3315 |
| BshNI | GGYRCC | 2 cut(s) | 415, 1114 |
| BsiEI | CGRYCG | 1 cut(s) | 3315 |
| BsiHKAI | GWGCWC | 2 cut(s) | 21, 837 |
| BsiHKCI | CYCGRG | 1 cut(s) | 180 |
| BsiSI | CCGG | 6 cut(s) | 912, 1940, 1972, 3205, 3464, 3686 |
| BslFI | GGGAC | 6 cut(s) | 1217, 1649, 1971, 2264, 3446, 3459 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 280, 659, 2047, 2351, 2581, 2615, 3727, 3862 |
| BsmAI | GTCTC | 7 cut(s) | 163, 1182, 2459, 3696, 3919, 3954, 4013 |
| BsmBI | CGTCTC | 1 cut(s) | 2459 |
| BsmFI | GGGAC | 6 cut(s) | 1217, 1649, 1971, 2264, 3446, 3459 |
| BsmI | GAATGC | 2 cut(s) | 1854, 3758 |
| BsoBI | CYCGRG | 1 cut(s) | 180 |
| Bsp119I | TTCGAA | 1 cut(s) | 1320 |
| Bsp1286I | GDGCHC | 3 cut(s) | 21, 188, 837 |
| Bsp13I | TCCGGA | 1 cut(s) | 1971 |
| Bsp1407I | TGTACA | 1 cut(s) | 642 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3818 |
| BspCNI | CTCAG | 5 cut(s) | 25, 129, 789, 973, 3810 |
| BspEI | TCCGGA | 1 cut(s) | 1971 |
| BspFNI | CGCG | 3 cut(s) | 2655, 2790, 3063 |
| BspHI | TCATGA | 3 cut(s) | 1230, 1396, 3229 |
| BspLI | GGNNCC | 6 cut(s) | 95, 417, 1116, 1205, 1266, 1665 |
| BspMAI | CTGCAG | 1 cut(s) | 2161 |
| BspMI | ACCTGC | 1 cut(s) | 661 |
| BspOI | GCTAGC | 2 cut(s) | 1164, 3518 |
| BspPI | GGATC | 3 cut(s) | 171, 1235, 1336 |
| BspT104I | TTCGAA | 1 cut(s) | 1320 |
| BspT107I | GGYRCC | 2 cut(s) | 415, 1114 |
| BspTI | CTTAAG | 2 cut(s) | 404, 1705 |
| BsrBI | CCGCTC | 1 cut(s) | 3252 |
| BsrGI | TGTACA | 1 cut(s) | 642 |
| BsrI | ACTGG | 4 cut(s) | 111, 191, 618, 1417 |
| BssECI | CCNNGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| BssSI | CACGAG | 4 cut(s) | 2454, 3327, 3396, 4055 |
| BssT1I | CCWWGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| Bst2BI | CACGAG | 4 cut(s) | 2454, 3327, 3396, 4055 |
| Bst2UI | CCWGG | 1 cut(s) | 753 |
| Bst4CI | ACNGT | 9 cut(s) | 123, 1384, 1627, 2364, 2796, 2934, 3316, 3473, 3584 |
| Bst6I | CTCTTC | 5 cut(s) | 299, 812, 2112, 3600, 3957 |
| BstAFI | CTTAAG | 2 cut(s) | 404, 1705 |
| BstAUI | TGTACA | 1 cut(s) | 642 |
| BstBAI | YACGTR | 1 cut(s) | 4145 |
| BstBI | TTCGAA | 1 cut(s) | 1320 |
| BstC8I | GCNNGC | 6 cut(s) | 188, 1162, 1754, 1823, 2161, 3516 |
| BstDEI | CTNAG | 9 cut(s) | 33, 116, 148, 797, 981, 1098, 2369, 3818, 3939 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 657 |
| BstFNI | CGCG | 3 cut(s) | 2655, 2790, 3063 |
| BstH2I | RGCGCY | 2 cut(s) | 159, 1546 |
| BstHHI | GCGC | 5 cut(s) | 158, 367, 1152, 1545, 1641 |
| BstMAI | GTCTC | 7 cut(s) | 163, 1182, 2459, 3696, 3919, 3954, 4013 |
| BstMCI | CGRYCG | 1 cut(s) | 3315 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 233, 1149, 2105, 2772, 3045 |
| BstNI | CCWGG | 1 cut(s) | 753 |
| BstNSI | RCATGY | 2 cut(s) | 1580, 1615 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2471 |
| BstSCI | CCNGG | 5 cut(s) | 751, 910, 3204, 3462, 3684 |
| BstSFI | CTRYAG | 6 cut(s) | 2157, 2635, 2855, 2924, 2993, 3128 |
| BstSLI | GKGCMC | 1 cut(s) | 188 |
| BstUI | CGCG | 3 cut(s) | 2655, 2790, 3063 |
| BstV2I | GAAGAC | 4 cut(s) | 48, 237, 626, 2143 |
| BsuI | GTATCC | 1 cut(s) | 709 |
| BtgZI | GCGATG | 2 cut(s) | 1254, 2013 |
| BtsI | GCAGTG | 1 cut(s) | 2509 |
| BtsIMutI | CAGTG | 3 cut(s) | 645, 942, 2509 |
| BveI | ACCTGC | 1 cut(s) | 661 |
| Cac8I | GCNNGC | 6 cut(s) | 188, 1162, 1754, 1823, 2161, 3516 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2932 |
| CciI | TCATGA | 3 cut(s) | 1230, 1396, 3229 |
| CfoI | GCGC | 5 cut(s) | 158, 367, 1152, 1545, 1641 |
| CseI | GACGC | 3 cut(s) | 242, 533, 3231 |
| DdeI | CTNAG | 9 cut(s) | 33, 116, 148, 797, 981, 1098, 2369, 3818, 3939 |
| DraI | TTTAAA | 1 cut(s) | 1038 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 52 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 52 |
| EaeI | YGGCCR | 6 cut(s) | 591, 2695, 2830, 2899, 2968, 3103 |
| Eam1104I | CTCTTC | 5 cut(s) | 299, 812, 2112, 3600, 3957 |
| EarI | CTCTTC | 5 cut(s) | 299, 812, 2112, 3600, 3957 |
| Eco130I | CCWWGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| Eco32I | GATATC | 2 cut(s) | 1772, 4228 |
| Eco47I | GGWCC | 5 cut(s) | 123, 1014, 1204, 1663, 3868 |
| Eco47III | AGCGCT | 2 cut(s) | 157, 1544 |
| Eco57I | CTGAAG | 4 cut(s) | 1233, 1778, 2066, 3467 |
| Eco88I | CYCGRG | 1 cut(s) | 180 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 657 |
| EcoO109I | RGGNCCY | 7 cut(s) | 1204, 1663, 2773, 3046, 3190, 3854, 3868 |
| EcoRI | GAATTC | 2 cut(s) | 901, 3770 |
| EcoRII | CCWGG | 1 cut(s) | 751 |
| EcoRV | GATATC | 2 cut(s) | 1772, 4228 |
| EcoT14I | CCWWGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| EcoT22I | ATGCAT | 8 cut(s) | 784, 2683, 2752, 2818, 2887, 2956, 3025, 3091 |
| ErhI | CCWWGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| Esp3I | CGTCTC | 1 cut(s) | 2459 |
| FaqI | GGGAC | 6 cut(s) | 1217, 1649, 1971, 2264, 3446, 3459 |
| FauI | CCCGC | 3 cut(s) | 1692, 3245, 3643 |
| FbaI | TGATCA | 2 cut(s) | 552, 1896 |
| FblI | GTMKAC | 3 cut(s) | 738, 3586, 4096 |
| GlaI | GCGC | 5 cut(s) | 157, 366, 1151, 1544, 1640 |
| GsaI | CCCAGC | 1 cut(s) | 4040 |
| GsuI | CTGGAG | 6 cut(s) | 128, 1283, 1355, 3716, 3749, 3857 |
| HaeII | RGCGCY | 2 cut(s) | 159, 1546 |
| HapII | CCGG | 6 cut(s) | 912, 1940, 1972, 3205, 3464, 3686 |
| HgaI | GACGC | 3 cut(s) | 242, 533, 3231 |
| HhaI | GCGC | 5 cut(s) | 158, 367, 1152, 1545, 1641 |
| Hin6I | GCGC | 5 cut(s) | 156, 365, 1150, 1543, 1639 |
| HinP1I | GCGC | 5 cut(s) | 156, 365, 1150, 1543, 1639 |
| HincII | GTYRAC | 2 cut(s) | 954, 2592 |
| HindII | GTYRAC | 2 cut(s) | 954, 2592 |
| HindIII | AAGCTT | 2 cut(s) | 1871, 2224 |
| HpaII | CCGG | 6 cut(s) | 912, 1940, 1972, 3205, 3464, 3686 |
| HphI | GGTGA | 4 cut(s) | 512, 922, 2261, 4117 |
| Hpy99I | CGWCG | 3 cut(s) | 550, 2554, 2557 |
| HpyCH4III | ACNGT | 9 cut(s) | 123, 1384, 1627, 2364, 2796, 2934, 3316, 3473, 3584 |
| HpyCH4IV | ACGT | 3 cut(s) | 548, 1585, 4144 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 233, 1149, 2105, 2772, 3045 |
| HpyF3I | CTNAG | 9 cut(s) | 33, 116, 148, 797, 981, 1098, 2369, 3818, 3939 |
| HpySE526I | ACGT | 3 cut(s) | 548, 1585, 4144 |
| HspAI | GCGC | 5 cut(s) | 156, 365, 1150, 1543, 1639 |
| Kpn2I | TCCGGA | 1 cut(s) | 1971 |
| KpnI | GGTACC | 1 cut(s) | 1118 |
| Ksp22I | TGATCA | 2 cut(s) | 552, 1896 |
| LmnI | GCTCC | 6 cut(s) | 286, 400, 563, 1264, 1405, 4060 |
| MaeII | ACGT | 3 cut(s) | 548, 1585, 4144 |
| MaeIII | GTNAC | 7 cut(s) | 529, 541, 808, 928, 1621, 3523, 3788 |
| MbiI | CCGCTC | 1 cut(s) | 3252 |
| MfeI | CAATTG | 1 cut(s) | 1815 |
| MhlI | GDGCHC | 3 cut(s) | 21, 188, 837 |
| MlsI | TGGCCA | 6 cut(s) | 593, 2697, 2832, 2901, 2970, 3105 |
| MluNI | TGGCCA | 6 cut(s) | 593, 2697, 2832, 2901, 2970, 3105 |
| MlyI | GAGTC | 6 cut(s) | 619, 734, 2193, 3339, 3408, 3869 |
| MmeI | TCCRAC | 5 cut(s) | 156, 493, 585, 2227, 3972 |
| Mox20I | TGGCCA | 6 cut(s) | 593, 2697, 2832, 2901, 2970, 3105 |
| Mph1103I | ATGCAT | 8 cut(s) | 784, 2683, 2752, 2818, 2887, 2956, 3025, 3091 |
| MroI | TCCGGA | 1 cut(s) | 1971 |
| MscI | TGGCCA | 6 cut(s) | 593, 2697, 2832, 2901, 2970, 3105 |
| MslI | CAYNNNNRTG | 4 cut(s) | 947, 1914, 2514, 4143 |
| Msp20I | TGGCCA | 6 cut(s) | 593, 2697, 2832, 2901, 2970, 3105 |
| MspA1I | CMGCKG | 4 cut(s) | 8, 2673, 2877, 3150 |
| MspCI | CTTAAG | 2 cut(s) | 404, 1705 |
| MspI | CCGG | 6 cut(s) | 912, 1940, 1972, 3205, 3464, 3686 |
| MspR9I | CCNGG | 5 cut(s) | 753, 912, 3206, 3464, 3686 |
| MunI | CAATTG | 1 cut(s) | 1815 |
| Mva1269I | GAATGC | 2 cut(s) | 1854, 3758 |
| MvaI | CCWGG | 1 cut(s) | 753 |
| MvnI | CGCG | 3 cut(s) | 2655, 2790, 3063 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 233, 1149, 2105, 2772, 3045 |
| NciI | CCSGG | 4 cut(s) | 912, 3206, 3464, 3686 |
| NheI | GCTAGC | 2 cut(s) | 1160, 3514 |
| NlaIV | GGNNCC | 6 cut(s) | 95, 417, 1116, 1205, 1266, 1665 |
| NmuCI | GTSAC | 3 cut(s) | 529, 928, 3788 |
| NsiI | ATGCAT | 8 cut(s) | 784, 2683, 2752, 2818, 2887, 2956, 3025, 3091 |
| NspI | RCATGY | 2 cut(s) | 1580, 1615 |
| NspV | TTCGAA | 1 cut(s) | 1320 |
| OliI | CACNNNNGTG | 2 cut(s) | 947, 2514 |
| PagI | TCATGA | 3 cut(s) | 1230, 1396, 3229 |
| PciI | ACATGT | 2 cut(s) | 1576, 1611 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 466 |
| PctI | GAATGC | 2 cut(s) | 1854, 3758 |
| PfeI | GAWTC | 8 cut(s) | 40, 389, 449, 482, 577, 1794, 3544, 3709 |
| PflFI | GACNNNGTC | 3 cut(s) | 1661, 1978, 3225 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2615, 3727 |
| PfoI | TCCNGGA | 3 cut(s) | 910, 3204, 3462 |
| PleI | GAGTC | 6 cut(s) | 619, 734, 2193, 3338, 3407, 3869 |
| PpsI | GAGTC | 6 cut(s) | 619, 734, 2193, 3338, 3407, 3869 |
| Ppu21I | YACGTR | 1 cut(s) | 4145 |
| PpuMI | RGGWCCY | 3 cut(s) | 1204, 1663, 3868 |
| PscI | ACATGT | 2 cut(s) | 1576, 1611 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2471 |
| PshBI | ATTAAT | 1 cut(s) | 384 |
| PsiI | TTATAA | 1 cut(s) | 1022 |
| Psp5II | RGGWCCY | 3 cut(s) | 1204, 1663, 3868 |
| Psp6I | CCWGG | 1 cut(s) | 751 |
| PspFI | CCCAGC | 1 cut(s) | 4036 |
| PspGI | CCWGG | 1 cut(s) | 751 |
| PspN4I | GGNNCC | 6 cut(s) | 95, 417, 1116, 1205, 1266, 1665 |
| PspPPI | RGGWCCY | 3 cut(s) | 1204, 1663, 3868 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2331, 2363 |
| PstI | CTGCAG | 1 cut(s) | 2161 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2932 |
| PsyI | GACNNNGTC | 3 cut(s) | 1661, 1978, 3225 |
| PvuII | CAGCTG | 4 cut(s) | 8, 2673, 2877, 3150 |
| RseI | CAYNNNNRTG | 4 cut(s) | 947, 1914, 2514, 4143 |
| SchI | GAGTC | 6 cut(s) | 619, 734, 2193, 3339, 3408, 3869 |
| ScrFI | CCNGG | 5 cut(s) | 753, 912, 3206, 3464, 3686 |
| SduI | GDGCHC | 3 cut(s) | 21, 188, 837 |
| SfcI | CTRYAG | 6 cut(s) | 2157, 2635, 2855, 2924, 2993, 3128 |
| SfiI | GGCCNNNNNGGCC | 2 cut(s) | 2772, 3045 |
| SfuI | TTCGAA | 1 cut(s) | 1320 |
| SinI | GGWCC | 5 cut(s) | 123, 1014, 1204, 1663, 3868 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 947, 1914, 2514, 4143 |
| SspI | AATATT | 2 cut(s) | 1480, 2603 |
| StyD4I | CCNGG | 5 cut(s) | 751, 910, 3204, 3462, 3684 |
| StyI | CCWWGG | 4 cut(s) | 48, 1119, 1877, 4182 |
| TaaI | ACNGT | 9 cut(s) | 123, 1384, 1627, 2364, 2796, 2934, 3316, 3473, 3584 |
| TaiI | ACGT | 3 cut(s) | 551, 1588, 4147 |
| TatI | WGTACW | 3 cut(s) | 642, 1488, 2188 |
| TauI | GCSGC | 2 cut(s) | 68, 2328 |
| TfiI | GAWTC | 8 cut(s) | 40, 389, 449, 482, 577, 1794, 3544, 3709 |
| TscAI | CASTG | 3 cut(s) | 645, 949, 2516 |
| TseFI | GTSAC | 3 cut(s) | 529, 928, 3788 |
| Tsp45I | GTSAC | 3 cut(s) | 529, 928, 3788 |
| TspGWI | ACGGA | 5 cut(s) | 3335, 3404, 3511, 3551, 3614 |
| TspRI | CASTG | 3 cut(s) | 645, 949, 2516 |
| Tth111I | GACNNNGTC | 3 cut(s) | 1661, 1978, 3225 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2615, 3727 |
| Vha464I | CTTAAG | 2 cut(s) | 404, 1705 |
| VpaK11BI | GGWCC | 5 cut(s) | 123, 1014, 1204, 1663, 3868 |
| VspI | ATTAAT | 1 cut(s) | 384 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 657 |
| XapI | RAATTY | 8 cut(s) | 11, 901, 1039, 1741, 1934, 2421, 2502, 3770 |
| XbaI | TCTAGA | 1 cut(s) | 1774 |
| XceI | RCATGY | 2 cut(s) | 1580, 1615 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 198, 601, 2068 |
| XmiI | GTMKAC | 3 cut(s) | 738, 3586, 4096 |
| Zsp2I | ATGCAT | 8 cut(s) | 784, 2683, 2752, 2818, 2887, 2956, 3025, 3091 |