RchiOBHm_Chr3g0490751

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
37390693 .. 37391917
1225 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45384

Sequence Viewer

Length: 1185 bp
ATGCACGATCTTGTGCATGATCTTGCAGAACGTGTATCAAAATCAAGAAACTTACACTCACTTTTTCCCAATGGAGAAGTCATTGACCTTGAGAGCAACTTACTTAATTTTAAATCTTTACGTGTCTTAAATTTATACAATGCATACATTATGGAGTTGCCAATTTCAATTGGGAACTTGAAACATTTGAGGTATCTGAATGTTTTGAAAACAAGAATCAAAACATTTCCCAAATCAATTGGTCAGCTTTACAACCTGCAAACATTGAAAATAGCTTATCAGCTTGAAGAGTTTCCGAGAGAAATTGCAAATTTGATCAACTTGCAGCACATTTGTTTTGGTAGATATATGAAAGTTCCAAGTGGAATATTGGGACAGTTCACTAATCTTCGGTCATTACCTTTTCTCAAGGTGGGTAAAGAGCCAGGTCCGAGAATTGAGGAATTGAGTGGTTTAAACCAATTGCAAAACACCTTATCTATTTATGGACTGGAAAATGTAAGAGATGGAGAAGAAGCGCAGAAAGCAAACTTAGTTGAGAAGAAACATATATGCAAGTTAATCCTTGAATGGAAGCTTGATAGGCCAAGCCACAAAGTGGAGAATGAAGACGATGTACTAAAAGGCCTACGACCACATGATAGTTTGGAATTTTTGGCTATTCATGAATTCATGGGTGTTGAATTTCCATCATGGTTATTGCTAGCCAAGAATTTGAAACACATTGAATTATTGGGCTGCAACAAATGTGAAGGAGTTCCAGTACTTGGGCATTTACCCAGTCTTAGTTGTGTTAAGATTAAGAGCATGGAGAATCTAACTTGTATGGGATCTGAGTTTTATGGTGATAACCATGTTAACTGTGGAAATGGATCAAGTAAGGAGGCCCGGCCTTTGTTCCCTGCTTTGAAAACATTGCATATTGAGGAGGCACATAACCTGATTGAATGGATGGAAGCGCCAACAGAGGGAGGAAGTAGGGTGGTGTTTCCTTGCCTTGAGGAGCTAACCTTGATTCACTGTGACCAACTGACAAGTGCTCCCAGTCATCTTCCATCTCTTAAGAAGTTGGTGATACAAGACATGGATAGTGGAGGCATGCCAATAGAAAGTTATGGAATGTGGGGGGACTTACTTGTCTGCCGGAAGGGATGTTGGAAAACAACAAGAATCTTGCACATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

394

Amino Acids

44.68

Weight (kDa)

6.79

Isoelectric Point (pI)

52.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 19 - 271 7.6e-29 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 146 - 270 1.5e-35 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1136
Acc36I ACCTGC 1 cut(s) 264
AccB7I CCANNNNNTGG 2 cut(s) 598, 767
AclWI GGATC 2 cut(s) 838, 880
AcsI RAATTY 6 cut(s) 130, 310, 650, 668, 683, 712
AdeI CACNNNGTG 1 cut(s) 598
AfaI GTAC 2 cut(s) 618, 765
AfiI CCNNNNNNNGG 3 cut(s) 598, 767, 968
AflII CTTAAG 1 cut(s) 1061
AflIII ACRYGT 2 cut(s) 31, 121
AjnI CCWGG 1 cut(s) 424
AluBI AGCT 5 cut(s) 247, 275, 283, 577, 1006
AluI AGCT 5 cut(s) 247, 275, 283, 577, 1006
Alw21I GWGCWC 1 cut(s) 1042
AlwI GGATC 2 cut(s) 838, 880
AoxI GGCC 4 cut(s) 584, 625, 885, 890
ApeKI GCWGC 2 cut(s) 325, 738
ApoI RAATTY 6 cut(s) 130, 310, 650, 668, 683, 712
Asp700I GAANNNNTTC 2 cut(s) 291, 756
AspLEI GCGC 2 cut(s) 520, 961
AspS9I GGNCC 2 cut(s) 428, 886
AsuC2I CCSGG 1 cut(s) 889
AsuHPI GGTGA 2 cut(s) 857, 1084
AsuNHI GCTAGC 1 cut(s) 703
AvaII GGWCC 1 cut(s) 428
BarI GAAGNNNNNNTAC 2 cut(s) 600, 632
BbsI GAAGAC 1 cut(s) 615
Bbv12I GWGCWC 1 cut(s) 1042
BbvI GCAGC 2 cut(s) 337, 725
BccI CCATC 4 cut(s) 500, 697, 946, 1063
BciT130I CCWGG 1 cut(s) 426
BclI TGATCA 1 cut(s) 315
BcnI CCSGG 1 cut(s) 889
BfaI CTAG 1 cut(s) 704
BfoI RGCGCY 1 cut(s) 962
BfrI CTTAAG 1 cut(s) 1061
BfuAI ACCTGC 1 cut(s) 264
BisI GCNGC 2 cut(s) 326, 739
BlsI GCNGC 2 cut(s) 327, 740
BmcAI AGTACT 1 cut(s) 765
Bme1390I CCNGG 2 cut(s) 426, 889
Bme18I GGWCC 1 cut(s) 428
BmgT120I GGNCC 2 cut(s) 428, 886
BmrFI CCNGG 2 cut(s) 426, 889
BmrI ACTGGG 2 cut(s) 774, 1038
BmtI GCTAGC 1 cut(s) 707
BmuI ACTGGG 2 cut(s) 774, 1038
BpiI GAAGAC 1 cut(s) 615
BpuEI CTTGAG 3 cut(s) 110, 392, 1019
BpuMI CCSGG 1 cut(s) 889
BsaAI YACGTR 1 cut(s) 122
BsaXI ACNNNNNCTCC 4 cut(s) 747, 777, 1024, 1054
Bsc4I CCNNNNNNNGG 3 cut(s) 598, 767, 968
Bse1I ACTGG 4 cut(s) 495, 761, 780, 1044
Bse3DI GCAATG 1 cut(s) 914
BseBI CCWGG 1 cut(s) 426
BseGI GGATG 2 cut(s) 957, 1157
BseLI CCNNNNNNNGG 3 cut(s) 598, 767, 968
BseMI GCAATG 1 cut(s) 914
BseMII CTCAG 1 cut(s) 825
BseNI ACTGG 4 cut(s) 495, 761, 780, 1044
BseRI GAGGAG 2 cut(s) 941, 1016
BseXI GCAGC 2 cut(s) 337, 725
BshFI GGCC 4 cut(s) 586, 627, 887, 892
BsiHKAI GWGCWC 1 cut(s) 1042
BsiSI CCGG 2 cut(s) 889, 1144
BslFI GGGAC 2 cut(s) 387, 1142
BslI CCNNNNNNNGG 3 cut(s) 598, 767, 968
BsmFI GGGAC 2 cut(s) 387, 1142
BsnI GGCC 4 cut(s) 586, 627, 887, 892
Bsp1286I GDGCHC 1 cut(s) 1042
Bsp143I GATC 5 cut(s) 7, 19, 315, 830, 872
BspANI GGCC 4 cut(s) 586, 627, 887, 892
BspCNI CTCAG 1 cut(s) 826
BspHI TCATGA 1 cut(s) 664
BspMI ACCTGC 1 cut(s) 264
BspOI GCTAGC 1 cut(s) 707
BspPI GGATC 2 cut(s) 838, 880
BspTI CTTAAG 1 cut(s) 1061
BsrDI GCAATG 1 cut(s) 914
BsrI ACTGG 4 cut(s) 495, 761, 780, 1044
BssMI GATC 5 cut(s) 7, 19, 315, 830, 872
Bst2UI CCWGG 1 cut(s) 426
Bst4CI ACNGT 3 cut(s) 378, 863, 1022
Bst6I CTCTTC 1 cut(s) 282
BstAFI CTTAAG 1 cut(s) 1061
BstBAI YACGTR 1 cut(s) 122
BstC8I GCNNGC 2 cut(s) 705, 1100
BstDEI CTNAG 3 cut(s) 532, 785, 834
BstF5I GGATG 2 cut(s) 957, 1157
BstH2I RGCGCY 1 cut(s) 962
BstHHI GCGC 2 cut(s) 520, 961
BstKTI GATC 5 cut(s) 10, 22, 318, 833, 875
BstMBI GATC 5 cut(s) 7, 19, 315, 830, 872
BstMWI GCNNNNNNNGC 2 cut(s) 524, 583
BstNI CCWGG 1 cut(s) 426
BstNSI RCATGY 1 cut(s) 1102
BstSCI CCNGG 2 cut(s) 424, 887
BstV1I GCAGC 2 cut(s) 337, 725
BstV2I GAAGAC 1 cut(s) 615
BstX2I RGATCY 1 cut(s) 830
BstYI RGATCY 1 cut(s) 830
BsuRI GGCC 4 cut(s) 586, 627, 887, 892
BtsCI GGATG 2 cut(s) 957, 1157
BtsIMutI CAGTG 1 cut(s) 1018
BveI ACCTGC 1 cut(s) 264
Cac8I GCNNGC 2 cut(s) 705, 1100
CciI TCATGA 1 cut(s) 664
CfoI GCGC 2 cut(s) 520, 961
Cfr13I GGNCC 2 cut(s) 428, 886
Csp6I GTAC 2 cut(s) 617, 764
CviAII CATG 9 cut(s) 17, 638, 665, 673, 693, 808, 854, 1084, 1099
CviQI GTAC 2 cut(s) 617, 764
DdeI CTNAG 3 cut(s) 532, 785, 834
DpnI GATC 5 cut(s) 9, 21, 317, 832, 874
DpnII GATC 5 cut(s) 7, 19, 315, 830, 872
DraI TTTAAA 2 cut(s) 112, 456
DraIII CACNNNGTG 1 cut(s) 598
DrdI GACNNNNNNGTC 1 cut(s) 1136
DseDI GACNNNNNNGTC 1 cut(s) 1136
Eam1104I CTCTTC 1 cut(s) 282
EarI CTCTTC 1 cut(s) 282
Eco147I AGGCCT 1 cut(s) 627
Eco47I GGWCC 1 cut(s) 428
EcoRI GAATTC 1 cut(s) 668
EcoRII CCWGG 1 cut(s) 424
EcoT22I ATGCAT 1 cut(s) 145
FaeI CATG 9 cut(s) 20, 641, 668, 676, 696, 811, 857, 1087, 1102
FaqI GGGAC 2 cut(s) 387, 1142
FatI CATG 9 cut(s) 16, 637, 664, 672, 692, 807, 853, 1083, 1098
FbaI TGATCA 1 cut(s) 315
Fnu4HI GCNGC 2 cut(s) 326, 739
FokI GGATG 2 cut(s) 964, 1164
Fsp4HI GCNGC 2 cut(s) 326, 739
FspBI CTAG 1 cut(s) 704
GlaI GCGC 2 cut(s) 519, 960
GluI GCNGC 2 cut(s) 326, 739
HaeII RGCGCY 1 cut(s) 962
HaeIII GGCC 4 cut(s) 586, 627, 887, 892
HapII CCGG 2 cut(s) 889, 1144
HhaI GCGC 2 cut(s) 520, 961
Hin1II CATG 9 cut(s) 20, 641, 668, 676, 696, 811, 857, 1087, 1102
Hin6I GCGC 2 cut(s) 518, 959
HinP1I GCGC 2 cut(s) 518, 959
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HindIII AAGCTT 1 cut(s) 575
HinfI GANTC 4 cut(s) 216, 814, 1015, 1170
HpaI GTTAAC 1 cut(s) 859
HpaII CCGG 2 cut(s) 889, 1144
HphI GGTGA 2 cut(s) 857, 1084
Hpy166II GTNNAC 2 cut(s) 381, 859
Hpy188I TCNGA 4 cut(s) 198, 297, 432, 835
Hpy188III TCNNGA 2 cut(s) 45, 665
Hpy8I GTNNAC 2 cut(s) 381, 859
HpyAV CCTTC 2 cut(s) 746, 1141
HpyCH4III ACNGT 3 cut(s) 378, 863, 1022
HpyCH4IV ACGT 2 cut(s) 31, 121
HpyF10VI GCNNNNNNNGC 2 cut(s) 524, 583
HpyF3I CTNAG 3 cut(s) 532, 785, 834
HpySE526I ACGT 2 cut(s) 31, 121
Hsp92II CATG 9 cut(s) 20, 641, 668, 676, 696, 811, 857, 1087, 1102
HspAI GCGC 2 cut(s) 518, 959
Ksp22I TGATCA 1 cut(s) 315
KspAI GTTAAC 1 cut(s) 859
Kzo9I GATC 5 cut(s) 7, 19, 315, 830, 872
LmnI GCTCC 2 cut(s) 1003, 1045
Lsp1109I GCAGC 2 cut(s) 337, 725
MaeI CTAG 1 cut(s) 704
MaeII ACGT 2 cut(s) 31, 121
MaeIII GTNAC 1 cut(s) 1022
MalI GATC 5 cut(s) 9, 21, 317, 832, 874
MboI GATC 5 cut(s) 7, 19, 315, 830, 872
MboII GAAGA 6 cut(s) 299, 380, 524, 553, 620, 1043
MfeI CAATTG 3 cut(s) 168, 237, 461
MflI RGATCY 1 cut(s) 830
MhlI GDGCHC 1 cut(s) 1042
MmeI TCCRAC 1 cut(s) 1136
MnlI CCTC 9 cut(s) 183, 433, 877, 919, 922, 961, 965, 994, 1088
Mph1103I ATGCAT 1 cut(s) 145
MroXI GAANNNNTTC 2 cut(s) 291, 756
MspCI CTTAAG 1 cut(s) 1061
MspI CCGG 2 cut(s) 889, 1144
MspR9I CCNGG 2 cut(s) 426, 889
MssI GTTTAAAC 1 cut(s) 456
MunI CAATTG 3 cut(s) 168, 237, 461
MvaI CCWGG 1 cut(s) 426
MwoI GCNNNNNNNGC 2 cut(s) 524, 583
NciI CCSGG 1 cut(s) 889
NdeII GATC 5 cut(s) 7, 19, 315, 830, 872
NheI GCTAGC 1 cut(s) 703
NlaIII CATG 9 cut(s) 20, 641, 668, 676, 696, 811, 857, 1087, 1102
NmuCI GTSAC 1 cut(s) 1022
NsiI ATGCAT 1 cut(s) 145
NspI RCATGY 1 cut(s) 1102
PaeI GCATGC 1 cut(s) 1102
PagI TCATGA 1 cut(s) 664
PceI AGGCCT 1 cut(s) 627
PdmI GAANNNNTTC 2 cut(s) 291, 756
PfeI GAWTC 4 cut(s) 216, 814, 1015, 1170
PflMI CCANNNNNTGG 2 cut(s) 598, 767
PkrI GCNGC 2 cut(s) 327, 740
PmeI GTTTAAAC 1 cut(s) 456
Ppu21I YACGTR 1 cut(s) 122
Psp6I CCWGG 1 cut(s) 424
PspGI CCWGG 1 cut(s) 424
PspPI GGNCC 2 cut(s) 428, 886
PsuI RGATCY 1 cut(s) 830
RsaI GTAC 2 cut(s) 618, 765
RsaNI GTAC 2 cut(s) 617, 764
SatI GCNGC 2 cut(s) 326, 739
Sau3AI GATC 5 cut(s) 7, 19, 315, 830, 872
Sau96I GGNCC 2 cut(s) 428, 886
ScaI AGTACT 1 cut(s) 765
ScrFI CCNGG 2 cut(s) 426, 889
SduI GDGCHC 1 cut(s) 1042
SinI GGWCC 1 cut(s) 428
SmlI CTYRAG 4 cut(s) 89, 407, 998, 1061
SmoI CTYRAG 4 cut(s) 89, 407, 998, 1061
SphI GCATGC 1 cut(s) 1102
SseBI AGGCCT 1 cut(s) 627
SspI AATATT 1 cut(s) 369
SspMI CTAG 1 cut(s) 704
StuI AGGCCT 1 cut(s) 627
StyD4I CCNGG 2 cut(s) 424, 887
TaaI ACNGT 3 cut(s) 378, 863, 1022
TaiI ACGT 2 cut(s) 34, 124
TaqII GACCGA 1 cut(s) 381
TatI WGTACW 2 cut(s) 616, 763
TfiI GAWTC 4 cut(s) 216, 814, 1015, 1170
TscAI CASTG 1 cut(s) 1025
TseFI GTSAC 1 cut(s) 1022
TseI GCWGC 2 cut(s) 325, 738
Tsp45I GTSAC 1 cut(s) 1022
TspDTI ATGAA 5 cut(s) 365, 621, 653, 661, 681
TspRI CASTG 1 cut(s) 1025
Van91I CCANNNNNTGG 2 cut(s) 598, 767
Vha464I CTTAAG 1 cut(s) 1061
VpaK11BI GGWCC 1 cut(s) 428
XapI RAATTY 6 cut(s) 130, 310, 650, 668, 683, 712
XceI RCATGY 1 cut(s) 1102
XcmI CCANNNNNNNNNTGG 1 cut(s) 860
XmnI GAANNNNTTC 2 cut(s) 291, 756
XspI CTAG 1 cut(s) 704
ZrmI AGTACT 1 cut(s) 765
Zsp2I ATGCAT 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.