RchiOBHm_Chr3g0491011

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
37635645 .. 37637707
2063 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45403

Sequence Viewer

Length: 1989 bp
ATGTTGCGCTCCAAAACAACTGACGAATGGCGGTCAATTGTAAACAATAAAATATGGGATTTACCAGAAGGAGAAAAAAGAATTTTGTCAATTTTGAAGTTGAGTTTTGATGAATTGAAACCTTCATCCTTGAAACAATGTTTTGCATATTGCTCGATGTTCTTCAAAGATTTTGATATTGAAAAGGATGACTTGATCCAACTATGGATGGCTCAGGGATGGCTTCACCCTTGTCCTGACAAAGGCCTAGACATGGAGGAGAGAGGTAATGAATATTTTAAAATCCTATTGGCGAAGTCGTTTTTTCAAGACGCTAGAAAGGATTATGGTGGTAATGTTACCAAATGTAAGATGCACGATCTTGTGCATGATCTTGCAGAAAGTGTATCAAAATCAAGGAACTTACACTCACTTTTTCTCAATGGAGAAGTCCTTGACCTTGAGAGCAACTTACTTAATTTTAAATCTTTACGTGTCTTAAATTTATACAATGCAGACATTATGGAGTTGCCAATTTCAATTGGGAAGTTGAAACATTTGAGGTATCTGAATGTTTTGAAAACAAGAATCAAAACATTTCCCAAATCAATTGGTCAGCTTTACAACCTGCAAACATTGAAAATAGCTTATCAGCTTGAAGAGTTTCCGAGAGAAATTGCAAATCTGATAAACTTGCGGCACATTTATTTTGGTAGATATATGAAAGTTCCAAGTGGAATATTGGGACAGTTCACTAATCTTCGGTCATTACCTTTTCTCAAGGTGGGTAAAGAGACAGGTCCGAGAATTGAGGAATTGAGTGGTTTAAACCAGTTGCAGAACACCTTATCTATTTATGGACTGGAAAATGTAAGAGATGGAGAAGAAGCGCAGAAAGCAAACTTAGTTGAGAAGAAACATATACGCAAGTTAATCCTTGAATGGAAGCTTGATAGGCCAAGCCACAATGTGGACAATGAAGACGATGTACTAAAAGGCCTACGACCACATGATAGTTTGGAATTTTTGGCTATTCATGAATTCATGGGTATTGAATTTCCATCATGGTTATTGCTAGCCAAGAATTTGAAAGAGATTGAATTATTGGGCTGCAACAAATGTGAAGGAGTTCCAGTACTTGGGCATTTACCCAGTCTTAGTTGTGTTAAGATTAAGAGCATGGAGAATCTAACTTGTATGGGATCTGAGTTTTATGGTGATAACCATGTTAACTGTGGAAATGGATCAAGTAAGGAGGCCCGGCCTTTGTTCCCTGCTTTGAAAACATTGCATATTGAGGAGGCACAGAACCTGATTGAATGGATGGAAGCGCCAACAGAGGGAGGAAGTAGGGTGGTGTTTCCTTGCCTTGAGGAGCTGACCTTGATTCACTGTGACCAACTGACTAGTGCTCCCAGTCATTTTCCATCTCTTAAGAGGTTGGTGATAAGAGACATGGATAGTGGAGGCATGCCAATAGCAAGTATTCTAAGCAATCAACTCACCACTCTCACTAATCTCAGGTTATCGAATGTGGGGGGACTTACTTGTCTGCCGGAAGGGATGTTGGAAAACAACAAGAATCTTGCACATTTAAACATACATTCATGTTCGGAGTTGACTCATATATCAGAAGGGTTTGAGCACTGCTGCGCATCTCTTTCTCATTTGTATATAGGGAATTGCAATAATTTGAGATATTTACCTGATGGGATACTCACATCTTCTCTTAAAGGGTTGTCGTTGTGGGGTTGTGACAATTTAAAGTACATCCCAGATGCTACAGGCGATGGTCTCACATCCCTTCAAACATTGGAAGTGATGAGGTGCCCCAAAATAACATCCATTCCATTTTCACAAGGCCTCCCATCTCTCGGTGTATTAAGTATAGAAGACTGTCCCGAATTATCAAGTCTACCGGGTGGGCTGGAATTCTGTACCTCTATTCGGAGGTTGAGAATAACAAGACTCTCTTCCAATTTCACAAGGTGGCTTCACATCACTCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

662

Amino Acids

74.85

Weight (kDa)

6.42

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 53 - 126 5.1e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 135 - 388 1.7e-27 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 263 - 387 2.5e-35 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1527
Acc16I TGCGCA 1 cut(s) 1633
Acc36I ACCTGC 1 cut(s) 615
AccB1I GGYRCC 1 cut(s) 1806
AccB7I CCANNNNNTGG 2 cut(s) 949, 1118
AccI GTMKAC 1 cut(s) 1894
AciI CCGC 2 cut(s) 31, 676
AclWI GGATC 3 cut(s) 190, 1189, 1231
AcsI RAATTY 7 cut(s) 81, 481, 1001, 1019, 1034, 1063, 1910
AdeI CACNNNGTG 3 cut(s) 949, 1968, 1986
AfaI GTAC 4 cut(s) 969, 1116, 1748, 1918
AfiI CCNNNNNNNGG 7 cut(s) 242, 253, 949, 1118, 1319, 1853, 1926
AflII CTTAAG 1 cut(s) 1412
AflIII ACRYGT 1 cut(s) 472
AhlI ACTAGT 1 cut(s) 1385
AluBI AGCT 5 cut(s) 598, 626, 634, 928, 1357
AluI AGCT 5 cut(s) 598, 626, 634, 928, 1357
Alw21I GWGCWC 2 cut(s) 1393, 1626
Alw26I GTCTC 3 cut(s) 767, 1425, 1778
AlwI GGATC 3 cut(s) 190, 1189, 1231
AlwNI CAGNNNCTG 1 cut(s) 1291
AoxI GGCC 6 cut(s) 244, 935, 976, 1236, 1241, 1840
ApeKI GCWGC 2 cut(s) 1089, 1629
ApoI RAATTY 7 cut(s) 81, 481, 1001, 1019, 1034, 1063, 1910
Asp700I GAANNNNTTC 2 cut(s) 642, 1107
AspLEI GCGC 4 cut(s) 9, 871, 1312, 1634
AspS9I GGNCC 2 cut(s) 779, 1237
AsuC2I CCSGG 2 cut(s) 1240, 1899
AsuHPI GGTGA 4 cut(s) 218, 1208, 1435, 1474
AsuNHI GCTAGC 1 cut(s) 1054
AvaII GGWCC 1 cut(s) 779
BaeGI GKGCMC 1 cut(s) 1811
BanI GGYRCC 1 cut(s) 1806
BarI GAAGNNNNNNTAC 2 cut(s) 951, 983
BbsI GAAGAC 2 cut(s) 966, 1878
Bbv12I GWGCWC 2 cut(s) 1393, 1626
BbvI GCAGC 2 cut(s) 1076, 1616
BccI CCATC 9 cut(s) 202, 213, 851, 1048, 1297, 1414, 1682, 1763, 1855
BcgI CGANNNNNNTGC 2 cut(s) 135, 169
BciVI GTATCC 1 cut(s) 1686
BcnI CCSGG 2 cut(s) 1240, 1899
BcoDI GTCTC 3 cut(s) 767, 1425, 1778
BcuI ACTAGT 1 cut(s) 1385
BfaI CTAG 4 cut(s) 248, 315, 1055, 1386
BfmI CTRYAG 1 cut(s) 1761
BfoI RGCGCY 1 cut(s) 1313
BfrI CTTAAG 1 cut(s) 1412
BfuAI ACCTGC 1 cut(s) 615
BfuI GTATCC 1 cut(s) 1686
BisI GCNGC 3 cut(s) 677, 1090, 1630
BlsI GCNGC 3 cut(s) 678, 1091, 1631
BmcAI AGTACT 1 cut(s) 1116
Bme1390I CCNGG 2 cut(s) 1240, 1899
Bme18I GGWCC 1 cut(s) 779
BmgT120I GGNCC 2 cut(s) 779, 1237
BmiI GGNNCC 1 cut(s) 1808
BmrFI CCNGG 2 cut(s) 1240, 1899
BmrI ACTGGG 2 cut(s) 1125, 1389
BmsI GCATC 3 cut(s) 342, 1643, 1747
BmtI GCTAGC 1 cut(s) 1058
BmuI ACTGGG 2 cut(s) 1125, 1389
BpiI GAAGAC 2 cut(s) 966, 1878
Bpu10I CCTNAGC 1 cut(s) 213
BpuEI CTTGAG 3 cut(s) 461, 743, 1370
BpuMI CCSGG 2 cut(s) 1240, 1899
BsaAI YACGTR 1 cut(s) 473
BsaI GGTCTC 1 cut(s) 1778
BsaXI ACNNNNNCTCC 6 cut(s) 1098, 1128, 1375, 1405, 1827, 1857
Bsc4I CCNNNNNNNGG 7 cut(s) 242, 253, 949, 1118, 1319, 1853, 1926
Bse1I ACTGG 5 cut(s) 811, 846, 1112, 1131, 1395
Bse3DI GCAATG 1 cut(s) 1265
BseGI GGATG 9 cut(s) 125, 193, 213, 224, 1308, 1548, 1749, 1778, 1820
BseLI CCNNNNNNNGG 7 cut(s) 242, 253, 949, 1118, 1319, 1853, 1926
BseMI GCAATG 1 cut(s) 1265
BseMII CTCAG 3 cut(s) 227, 1176, 1513
BseNI ACTGG 5 cut(s) 811, 846, 1112, 1131, 1395
BseRI GAGGAG 3 cut(s) 272, 1292, 1367
BseSI GKGCMC 1 cut(s) 1811
BseXI GCAGC 2 cut(s) 1076, 1616
BshFI GGCC 6 cut(s) 246, 937, 978, 1238, 1243, 1842
BshNI GGYRCC 1 cut(s) 1806
BsiHKAI GWGCWC 2 cut(s) 1393, 1626
BsiSI CCGG 3 cut(s) 1240, 1535, 1898
BslFI GGGAC 3 cut(s) 738, 1533, 1863
BslI CCNNNNNNNGG 7 cut(s) 242, 253, 949, 1118, 1319, 1853, 1926
BsmAI GTCTC 3 cut(s) 767, 1425, 1778
BsmFI GGGAC 3 cut(s) 738, 1533, 1863
BsnI GGCC 6 cut(s) 246, 937, 978, 1238, 1243, 1842
Bso31I GGTCTC 1 cut(s) 1778
Bsp1286I GDGCHC 3 cut(s) 1393, 1626, 1811
Bsp143I GATC 5 cut(s) 195, 358, 370, 1181, 1223
BspACI CCGC 2 cut(s) 31, 676
BspANI GGCC 6 cut(s) 246, 937, 978, 1238, 1243, 1842
BspCNI CTCAG 3 cut(s) 226, 1177, 1512
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 1 cut(s) 1808
BspMI ACCTGC 1 cut(s) 615
BspOI GCTAGC 1 cut(s) 1058
BspPI GGATC 3 cut(s) 190, 1189, 1231
BspT107I GGYRCC 1 cut(s) 1806
BspTI CTTAAG 1 cut(s) 1412
BspTNI GGTCTC 1 cut(s) 1778
BsrDI GCAATG 1 cut(s) 1265
BsrI ACTGG 5 cut(s) 811, 846, 1112, 1131, 1395
BssMI GATC 5 cut(s) 195, 358, 370, 1181, 1223
Bst4CI ACNGT 4 cut(s) 729, 1214, 1373, 1877
Bst6I CTCTTC 2 cut(s) 633, 1957
BstAFI CTTAAG 1 cut(s) 1412
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 2 cut(s) 1056, 1451
BstDEI CTNAG 6 cut(s) 213, 883, 1136, 1185, 1469, 1499
BstENI CCTNNNNNAGG 1 cut(s) 240
BstF5I GGATG 9 cut(s) 125, 193, 213, 224, 1308, 1548, 1749, 1778, 1820
BstH2I RGCGCY 1 cut(s) 1313
BstHHI GCGC 4 cut(s) 9, 871, 1312, 1634
BstKTI GATC 5 cut(s) 198, 361, 373, 1184, 1226
BstMAI GTCTC 3 cut(s) 767, 1425, 1778
BstMBI GATC 5 cut(s) 195, 358, 370, 1181, 1223
BstMWI GCNNNNNNNGC 2 cut(s) 875, 934
BstNSI RCATGY 1 cut(s) 1453
BstSCI CCNGG 2 cut(s) 1238, 1897
BstSFI CTRYAG 1 cut(s) 1761
BstSLI GKGCMC 1 cut(s) 1811
BstV1I GCAGC 2 cut(s) 1076, 1616
BstV2I GAAGAC 2 cut(s) 966, 1878
BstX2I RGATCY 1 cut(s) 1181
BstYI RGATCY 1 cut(s) 1181
BsuI GTATCC 1 cut(s) 1686
BsuRI GGCC 6 cut(s) 246, 937, 978, 1238, 1243, 1842
BtgZI GCGATG 1 cut(s) 1782
BtsCI GGATG 9 cut(s) 125, 193, 213, 224, 1308, 1548, 1749, 1778, 1820
BtsI GCAGTG 1 cut(s) 1624
BtsIMutI CAGTG 2 cut(s) 1369, 1624
BveI ACCTGC 1 cut(s) 615
Cac8I GCNNGC 2 cut(s) 1056, 1451
CaiI CAGNNNCTG 1 cut(s) 1291
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 4 cut(s) 9, 871, 1312, 1634
Cfr13I GGNCC 2 cut(s) 779, 1237
CseI GACGC 1 cut(s) 320
Csp6I GTAC 4 cut(s) 968, 1115, 1747, 1917
CviQI GTAC 4 cut(s) 968, 1115, 1747, 1917
DdeI CTNAG 6 cut(s) 213, 883, 1136, 1185, 1469, 1499
DpnI GATC 5 cut(s) 197, 360, 372, 1183, 1225
DpnII GATC 5 cut(s) 195, 358, 370, 1181, 1223
DraI TTTAAA 5 cut(s) 280, 463, 807, 1575, 1743
DraIII CACNNNGTG 3 cut(s) 949, 1968, 1986
DrdI GACNNNNNNGTC 1 cut(s) 1527
DseDI GACNNNNNNGTC 1 cut(s) 1527
Eam1104I CTCTTC 2 cut(s) 633, 1957
EarI CTCTTC 2 cut(s) 633, 1957
Eco147I AGGCCT 3 cut(s) 246, 978, 1842
Eco31I GGTCTC 1 cut(s) 1778
Eco47I GGWCC 1 cut(s) 779
EcoNI CCTNNNNNAGG 1 cut(s) 240
EcoRI GAATTC 2 cut(s) 1019, 1910
FalI AAGNNNNNCTT 4 cut(s) 176, 208, 1936, 1968
FaqI GGGAC 3 cut(s) 738, 1533, 1863
FblI GTMKAC 1 cut(s) 1894
Fnu4HI GCNGC 3 cut(s) 677, 1090, 1630
FokI GGATG 9 cut(s) 112, 200, 220, 231, 1315, 1555, 1736, 1765, 1807
Fsp4HI GCNGC 3 cut(s) 677, 1090, 1630
FspBI CTAG 4 cut(s) 248, 315, 1055, 1386
FspI TGCGCA 1 cut(s) 1633
GlaI GCGC 4 cut(s) 8, 870, 1311, 1633
GluI GCNGC 3 cut(s) 677, 1090, 1630
HaeII RGCGCY 1 cut(s) 1313
HaeIII GGCC 6 cut(s) 246, 937, 978, 1238, 1243, 1842
HapII CCGG 3 cut(s) 1240, 1535, 1898
HgaI GACGC 1 cut(s) 320
HhaI GCGC 4 cut(s) 9, 871, 1312, 1634
Hin6I GCGC 4 cut(s) 7, 869, 1310, 1632
HinP1I GCGC 4 cut(s) 7, 869, 1310, 1632
HincII GTYRAC 2 cut(s) 1210, 1599
HindII GTYRAC 2 cut(s) 1210, 1599
HindIII AAGCTT 1 cut(s) 926
HinfI GANTC 6 cut(s) 567, 1165, 1366, 1561, 1600, 1947
HpaI GTTAAC 1 cut(s) 1210
HpaII CCGG 3 cut(s) 1240, 1535, 1898
HphI GGTGA 4 cut(s) 218, 1208, 1435, 1474
Hpy166II GTNNAC 6 cut(s) 43, 732, 952, 1210, 1599, 1895
Hpy188I TCNGA 8 cut(s) 549, 648, 666, 783, 1186, 1594, 1612, 1929
Hpy188III TCNNGA 4 cut(s) 236, 308, 1016, 1880
Hpy8I GTNNAC 6 cut(s) 43, 732, 952, 1210, 1599, 1895
HpyAV CCTTC 6 cut(s) 62, 132, 1097, 1532, 1607, 1793
HpyCH4III ACNGT 4 cut(s) 729, 1214, 1373, 1877
HpyCH4IV ACGT 1 cut(s) 472
HpyF10VI GCNNNNNNNGC 2 cut(s) 875, 934
HpyF3I CTNAG 6 cut(s) 213, 883, 1136, 1185, 1469, 1499
HpySE526I ACGT 1 cut(s) 472
HspAI GCGC 4 cut(s) 7, 869, 1310, 1632
KspAI GTTAAC 1 cut(s) 1210
Kzo9I GATC 5 cut(s) 195, 358, 370, 1181, 1223
LmnI GCTCC 3 cut(s) 14, 1354, 1396
Lsp1109I GCAGC 2 cut(s) 1076, 1616
LweI GCATC 3 cut(s) 342, 1643, 1747
MaeI CTAG 4 cut(s) 248, 315, 1055, 1386
MaeII ACGT 1 cut(s) 472
MaeIII GTNAC 3 cut(s) 337, 1373, 1733
MalI GATC 5 cut(s) 197, 360, 372, 1183, 1225
MboI GATC 5 cut(s) 195, 358, 370, 1181, 1223
MboII GAAGA 9 cut(s) 154, 650, 731, 875, 904, 971, 1695, 1883, 1944
MfeI CAATTG 3 cut(s) 36, 519, 588
MflI RGATCY 1 cut(s) 1181
MhlI GDGCHC 3 cut(s) 1393, 1626, 1811
MlyI GAGTC 2 cut(s) 1594, 1941
MmeI TCCRAC 2 cut(s) 223, 1527
MroXI GAANNNNTTC 2 cut(s) 642, 1107
MspCI CTTAAG 1 cut(s) 1412
MspI CCGG 3 cut(s) 1240, 1535, 1898
MspR9I CCNGG 2 cut(s) 1240, 1899
MssI GTTTAAAC 1 cut(s) 807
MunI CAATTG 3 cut(s) 36, 519, 588
MwoI GCNNNNNNNGC 2 cut(s) 875, 934
NciI CCSGG 2 cut(s) 1240, 1899
NdeII GATC 5 cut(s) 195, 358, 370, 1181, 1223
NheI GCTAGC 1 cut(s) 1054
NlaIV GGNNCC 1 cut(s) 1808
NmuCI GTSAC 2 cut(s) 1373, 1733
NsbI TGCGCA 1 cut(s) 1633
NspI RCATGY 1 cut(s) 1453
PaeI GCATGC 1 cut(s) 1453
PagI TCATGA 1 cut(s) 1015
PceI AGGCCT 3 cut(s) 246, 978, 1842
PdmI GAANNNNTTC 2 cut(s) 642, 1107
PfeI GAWTC 4 cut(s) 567, 1165, 1366, 1561
PflMI CCANNNNNTGG 2 cut(s) 949, 1118
PkrI GCNGC 3 cut(s) 678, 1091, 1631
PleI GAGTC 2 cut(s) 1594, 1941
PmeI GTTTAAAC 1 cut(s) 807
PpsI GAGTC 2 cut(s) 1594, 1941
Ppu21I YACGTR 1 cut(s) 473
PspN4I GGNNCC 1 cut(s) 1808
PspPI GGNCC 2 cut(s) 779, 1237
PstNI CAGNNNCTG 1 cut(s) 1291
PsuI RGATCY 1 cut(s) 1181
RsaI GTAC 4 cut(s) 969, 1116, 1748, 1918
RsaNI GTAC 4 cut(s) 968, 1115, 1747, 1917
SatI GCNGC 3 cut(s) 677, 1090, 1630
Sau3AI GATC 5 cut(s) 195, 358, 370, 1181, 1223
Sau96I GGNCC 2 cut(s) 779, 1237
ScaI AGTACT 1 cut(s) 1116
SchI GAGTC 2 cut(s) 1594, 1941
ScrFI CCNGG 2 cut(s) 1240, 1899
SduI GDGCHC 3 cut(s) 1393, 1626, 1811
SfaNI GCATC 3 cut(s) 342, 1643, 1747
SfcI CTRYAG 1 cut(s) 1761
SinI GGWCC 1 cut(s) 779
SmlI CTYRAG 4 cut(s) 440, 758, 1349, 1412
SmoI CTYRAG 4 cut(s) 440, 758, 1349, 1412
SpeI ACTAGT 1 cut(s) 1385
SphI GCATGC 1 cut(s) 1453
SseBI AGGCCT 3 cut(s) 246, 978, 1842
SsiI CCGC 2 cut(s) 31, 676
SspI AATATT 2 cut(s) 275, 720
SspMI CTAG 4 cut(s) 248, 315, 1055, 1386
StuI AGGCCT 3 cut(s) 246, 978, 1842
StyD4I CCNGG 2 cut(s) 1238, 1897
TaaI ACNGT 4 cut(s) 729, 1214, 1373, 1877
TaiI ACGT 1 cut(s) 475
TaqI TCGA 2 cut(s) 155, 1508
TaqII GACCGA 1 cut(s) 732
TatI WGTACW 3 cut(s) 967, 1114, 1746
TauI GCSGC 1 cut(s) 679
TfiI GAWTC 4 cut(s) 567, 1165, 1366, 1561
TscAI CASTG 2 cut(s) 1376, 1631
TseFI GTSAC 2 cut(s) 1373, 1733
TseI GCWGC 2 cut(s) 1089, 1629
Tsp45I GTSAC 2 cut(s) 1373, 1733
TspDTI ATGAA 9 cut(s) 114, 126, 285, 716, 972, 1004, 1012, 1032, 1575
TspGWI ACGGA 1 cut(s) 1974
TspRI CASTG 2 cut(s) 1376, 1631
Van91I CCANNNNNTGG 2 cut(s) 949, 1118
Vha464I CTTAAG 1 cut(s) 1412
VpaK11BI GGWCC 1 cut(s) 779
XagI CCTNNNNNAGG 1 cut(s) 240
XapI RAATTY 7 cut(s) 81, 481, 1001, 1019, 1034, 1063, 1910
XceI RCATGY 1 cut(s) 1453
XcmI CCANNNNNNNNNTGG 1 cut(s) 1211
XmiI GTMKAC 1 cut(s) 1894
XmnI GAANNNNTTC 2 cut(s) 642, 1107
XspI CTAG 4 cut(s) 248, 315, 1055, 1386
ZrmI AGTACT 1 cut(s) 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.