Rmu_sc0004035.1_g000005

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004035.1
Physical Location & Seq
Reverse (-)
24332 .. 32891
8560 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004035.1_g000005.1.cds

Sequence Viewer

Length: 4044 bp
atggctgaatttctcacttttggtgctcaagaattgctgaagaaagtggcctcattggctgctcaagaattcgttcttgtatggggattcaatggagaaataacaaagctgcgtgagtcagtgctcatgcttgaggctgtgctacgagatgctgaacatccgcaacaagatcagggagaggctgtgaagctttgggtgaagaagcttgaagacatagctcagcatgccgatgatgtgttggatgattatggatatgagcttctccagcgtaaggtgcaattgcgaaaccagatgaagaaaaaggtgcaagatttttgttccctctccaatcccattatatttcgtgatggtgaaaaatggaacgatttggagaattgtttgctaagaattaccgatgcccaaggaagccgcattgttttcactactcgcagtgacaaagttgcaaaaactgtggagacccttcctaagtgtgatttgagaaaactatcagatgatgagtgttggcttatattgaagaataaagcagttccagtcggaagtgttcctatacttgaagatcaagagagaattggaagggagattgccaaaaagtgtggaggcctaccattagtggcaaaggtattaggaaacatcatgcgctctaaaacaagcaatgaatggagttcaattatggaaagtgaaatatgggacttgccggaagaagaagacagaatcatgtcaatcttaaagttgagttttgatgaattgaaattttcatcattgaaacaatgttttgcatattgctcgaaattcatcaaagactctgtaatggaaaaggatgacttggtccaactttggatggctcaaggatggcttcaccctgccaaaagtactatggagatggaggatagagggaatgaatatttcaacattttatctgaaaaatccctttttgaagacgttacaacggatgatgatggtaatacaacatgcaagatgcacgatcttgtgcatgaccttgcagaacaagtgtcaaacatgacaaactgtcgctcactattttcaaagggagaagcacttgggaacaccttgcctaactttagatctttgcgtgtgttaaatttatacaaggcagacattgacaagttgccgagttcaattggaaagttgacacacttgaggtatctgaatgttatgaaaacaaatgtgaaagcatttccaaaatctattggtcagctttattaccttgagacatttaaaatgccttatcatgttgaagagttcccaaagatgattgccgatatgatcaacttgagacatgtttattttggtaaatatgcgaaagttccggttggggtattgggaagattgactaatctcagatcattaccttttctgaaggtgggtaaggagactggacctagaattgaggaactgggtgggttaagccatttgagaggcaccttatctatctgtaatctggagcatgtaagagatggagaagaagcaatgaaagcaaagttagttgataagaaacatatacgcaagttaactctcgactggaagcttattagaccaagcaacaatgttgacaatgaggatattgtacttgaaggcctacgaccacattgtaatttggaaattttgaagattcaggggttcatgggtgttaagtttccatcatggtttttggatgccagcaacttgaaagaaattgaattagcagggtgcaacaaatgcgaacaagtcccaatactgggccatctgccaaatctcatacatgttaagatgaggaacatgcagaacttaaggtgcttggggtctgagttttatggttacgatcagatttccagtgcaacaacaagtgacgggagaaagactttgtttcctgctttgagatctttacatattcggaatgccgagaatctaatagaatggatggaagcaggggaagtgatgctgacggcagaaaaattaagggtgtttccttaccttgaggacctgaccctgcatgggtgtaagcaattgagaagtgctcccagtcattttccatctctcaagcagttgagtataggaggagtggaaagtggtatgcctttagcaagtattttaagcaataaactgactactctcactcatctcggagtaaatgatgtcgagggacttactagtcttccggaatggactttaagaaacaacaagagtcttgcggttttgaagataaagaggtgtccggagttaagttgcattgctccccatggatttgactgctgcgcatctcttgagagactgactattaggcactgtcctaagttgaggtatttatctgatgggctactcccactctctctcaaggagttggacatacaaaattgctccagtctagagtccattccaatcatccctgagcaaggcggtctcccatctctgcgcacattgtctatatccatgtgttctcagttatccagtttacctgataggctagaatactgcacatctcttcaaggattggcaatagacagatgcccaaagataacgtccattccagcccaatactgcacatctcttcgagaactgaaaatatcgcgctgcccagagataacgtccattccaattccatctgagggcctcccgtcccttggtcaactttggcttgagcagtgtcctgaattatcaagcctaccgagtgggctaagctgctgcacctctctctttgatttgtcaataacagggtgccctaaggttacatccattccaattgacagtctcagtacaacccttcgagacttgtgtgtagataatccagagtctcttccaattttacacggcggcttcacatccctccgtcgattgagaatttcgggatgtcaaagtacacaaattgatctgcaattttgtcaaatcctcgtctctcttgaggatttgacaataagacactgtcctaatctagagactgttccaagtttagacaagctcacatccctccgtcagttgtggattgttcgatgttcccgattgacatgtctacccagtgggttagcaatggcatccccacacgtattcacccgtctcaagcaattggaaattggttcgttttgggaagagctggattcattccctgctcttcaggttctaccacaacttgaatcattagggatctacgggtggccgaagctcaagtctctgcctgaacaaattcaacacttgacgtctttgacctctttgtggatagaggactttgacggagtggaggctattccagaatggttgggaaaccttgcatctcttcgctccttgtttatttgggagtgcaagaatctgatgtatctaccttccgtccaagctatggaacgcctcaccaaattagattcgctaagcatctacaattgtccccttttgagcgaaagatgcaccgcggagagcggcccagagtggcctaagatttctcatattccaaacatccgtggaatcactgttgcaaattctgcccagacatggaatgaatgtttaaaggttccctttcagaaaaagaagctttcagtctgtgcgtttgaagtggccttcaacatggtactttgcaaaaaaaatcaggagggagttggggatctctggactggaatcggacctaacattgcacgtaatgctatcattaatgctgctgaactagccagttatgatcaagtgaagcagacactcttgaaaattcccgggtttaacgacaatgttgttactcatctttttgctggtacgggggcaggtttctttgccgtctgcattggctcaccagttgatgtggttgagtcaagaatgatgggagattcttctgcttacaaaaataggatcgattgcttcgttaaaactttgaagattgatggacctttgggcttttataagggcttcatcccaaattttggacggctaggatcttggaatgtgatcaggtttctaacccttgagcaggtacaagtttcaacgccttccctttttatattcttcagccttttgagcgtctggtctttgcgttggttttctattttcacgtcagcagtccgaactgtagcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1347

Amino Acids

151.37

Weight (kDa)

6.63

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3870
AasI GACNNNNNNGTC 1 cut(s) 2148
AatII GACGTC 1 cut(s) 3191
Acc16I TGCGCA 2 cut(s) 2254, 2411
Acc36I ACCTGC 2 cut(s) 3725, 3928
AccB1I GGYRCC 2 cut(s) 1439, 2712
AccB7I CCANNNNNTGG 2 cut(s) 3325, 3890
AccBSI CCGCTC 1 cut(s) 3402
AccI GTMKAC 1 cut(s) 3004
AccII CGCG 2 cut(s) 2566, 3395
AccIII TCCGGA 2 cut(s) 2155, 2212
AciI CCGC 8 cut(s) 161, 409, 2189, 2394, 2808, 3393, 3395, 3402
AclWI GGATC 4 cut(s) 3143, 3591, 3827, 3910
AcoI YGGCCR 1 cut(s) 3146
AcuI CTGAAG 4 cut(s) 59, 1397, 3089, 3958
AcyI GRCGYC 1 cut(s) 3188
AfaI GTAC 7 cut(s) 871, 1587, 2752, 2854, 3552, 3727, 3942
AflII CTTAAG 1 cut(s) 1786
AflIII ACRYGT 4 cut(s) 1297, 1759, 2999, 3034
AhdI GACNNNNNGTC 1 cut(s) 1026
AhlI ACTAGT 1 cut(s) 2147
AjiI CACGTC 1 cut(s) 4020
Alw21I GWGCWC 3 cut(s) 28, 126, 2017
AlwI GGATC 4 cut(s) 3143, 3591, 3827, 3910
Ama87I CYCGRG 1 cut(s) 3686
Aor13HI TCCGGA 2 cut(s) 2155, 2212
AoxI GGCC 9 cut(s) 48, 598, 1594, 1738, 2605, 3146, 3403, 3413, 3537
ApeKI GCWGC 7 cut(s) 59, 109, 2250, 2568, 2676, 2679, 3635
ArsI GACNNNNNNTTYG 4 cut(s) 2501, 2533, 3143, 3175
AseI ATTAAT 1 cut(s) 3630
Asp700I GAANNNNTTC 2 cut(s) 72, 3174
AspLEI GCGC 4 cut(s) 639, 2255, 2412, 2568
AspS9I GGNCC 8 cut(s) 826, 1397, 1738, 1978, 2605, 3404, 3602, 3854
AsuC2I CCSGG 2 cut(s) 3687, 3688
AsuHPI GGTGA 6 cut(s) 208, 362, 848, 3034, 3328, 3753
AvaI CYCGRG 1 cut(s) 3686
AvaII GGWCC 5 cut(s) 826, 1397, 1978, 3602, 3854
AxyI CCTNAGG 1 cut(s) 2718
BaeGI GKGCMC 1 cut(s) 2717
BanI GGYRCC 2 cut(s) 1439, 2712
BbsI GAAGAC 4 cut(s) 216, 711, 942, 2144
Bbv12I GWGCWC 3 cut(s) 28, 126, 2017
BbvI GCAGC 7 cut(s) 46, 96, 2237, 2555, 2663, 2666, 3622
BceAI ACGGC 4 cut(s) 1959, 2821, 3731, 3911
BcgI CGANNNNNNTGC 2 cut(s) 765, 799
BclI TGATCA 3 cut(s) 1284, 3655, 3915
BcnI CCSGG 2 cut(s) 3687, 3688
BcuI ACTAGT 1 cut(s) 2147
BfaI CTAG 7 cut(s) 1401, 2148, 2363, 2462, 2927, 3644, 3899
BfmI CTRYAG 1 cut(s) 4035
BfrI CTTAAG 1 cut(s) 1786
BfuAI ACCTGC 2 cut(s) 3725, 3928
BglI GCCNNNNNGGC 1 cut(s) 56
BglII AGATCT 2 cut(s) 1082, 1877
BlpI GCTNAGC 3 cut(s) 219, 2672, 3353
BmcAI AGTACT 1 cut(s) 871
Bme1390I CCNGG 2 cut(s) 3687, 3688
Bme18I GGWCC 5 cut(s) 826, 1397, 1978, 3602, 3854
BmeRI GACNNNNNGTC 1 cut(s) 1026
BmeT110I CYCGRG 1 cut(s) 3686
BmgBI CACGTC 1 cut(s) 4020
BmgT120I GGNCC 8 cut(s) 826, 1397, 1738, 1978, 2605, 3404, 3602, 3854
BmiI GGNNCC 3 cut(s) 1441, 2714, 3495
BmrFI CCNGG 2 cut(s) 3687, 3688
BmrI ACTGGG 4 cut(s) 1424, 1745, 2013, 3003
BmuI ACTGGG 4 cut(s) 1424, 1745, 2013, 3003
BpiI GAAGAC 4 cut(s) 216, 711, 942, 2144
BplI GAGNNNNNCTC 2 cut(s) 1999, 2031
BpmI CTGGAG 3 cut(s) 248, 1481, 2341
Bpu10I CCTNAGC 1 cut(s) 2385
Bpu1102I GCTNAGC 3 cut(s) 219, 2672, 3353
BpuMI CCSGG 2 cut(s) 3687, 3688
Bsa29I ATCGAT 1 cut(s) 3822
BsaAI YACGTR 2 cut(s) 3037, 3617
BsaHI GRCGYC 1 cut(s) 3188
BsaI GGTCTC 2 cut(s) 449, 2402
BsaJI CCNNGG 6 cut(s) 400, 2236, 2617, 3393, 3442, 3686
BsaWI WCCGGW 3 cut(s) 1327, 2155, 2212
BsaXI ACNNNNNCTCC 2 cut(s) 168, 198
Bse21I CCTNAGG 1 cut(s) 2718
Bse3DI GCAATG 5 cut(s) 658, 1494, 2226, 3027, 3609
BseAI TCCGGA 2 cut(s) 2155, 2212
BseCI ATCGAT 1 cut(s) 3822
BseDI CCNNGG 6 cut(s) 400, 2236, 2617, 3393, 3442, 3686
BseMI GCAATG 5 cut(s) 658, 1494, 2226, 3027, 3609
BseMII CTCAG 7 cut(s) 233, 1372, 1794, 2376, 2450, 2592, 2761
BseRI GAGGAG 1 cut(s) 2070
BseSI GKGCMC 1 cut(s) 2717
BseXI GCAGC 7 cut(s) 46, 96, 2237, 2555, 2663, 2666, 3622
BsgI GTGCAG 3 cut(s) 2455, 2521, 2665
Bsh1236I CGCG 2 cut(s) 2566, 3395
BshFI GGCC 9 cut(s) 50, 600, 1596, 1740, 2607, 3148, 3405, 3415, 3539
BshNI GGYRCC 2 cut(s) 1439, 2712
BshVI ATCGAT 1 cut(s) 3822
BsiHKAI GWGCWC 3 cut(s) 28, 126, 2017
BsiHKCI CYCGRG 1 cut(s) 3686
BsiSI CCGG 5 cut(s) 695, 1328, 2156, 2213, 3687
BslFI GGGAC 5 cut(s) 701, 1712, 2154, 2599, 3354
BsmBI CGTCTC 2 cut(s) 2893, 3053
BsmFI GGGAC 5 cut(s) 701, 1712, 2154, 2599, 3354
BsmI GAATGC 1 cut(s) 1900
BsnI GGCC 9 cut(s) 50, 600, 1596, 1740, 2607, 3148, 3405, 3415, 3539
Bso31I GGTCTC 2 cut(s) 449, 2402
BsoBI CYCGRG 1 cut(s) 3686
Bsp1286I GDGCHC 4 cut(s) 28, 126, 2017, 2717
Bsp13I TCCGGA 2 cut(s) 2155, 2212
Bsp1720I GCTNAGC 3 cut(s) 219, 2672, 3353
Bsp19I CCATGG 1 cut(s) 2236
BspACI CCGC 8 cut(s) 161, 409, 2189, 2394, 2808, 3393, 3395, 3402
BspANI GGCC 9 cut(s) 50, 600, 1596, 1740, 2607, 3148, 3405, 3415, 3539
BspCNI CTCAG 7 cut(s) 232, 1371, 1795, 2377, 2449, 2593, 2760
BspDI ATCGAT 1 cut(s) 3822
BspEI TCCGGA 2 cut(s) 2155, 2212
BspFNI CGCG 2 cut(s) 2566, 3395
BspLI GGNNCC 3 cut(s) 1441, 2714, 3495
BspMI ACCTGC 2 cut(s) 3725, 3928
BspPI GGATC 4 cut(s) 3143, 3591, 3827, 3910
BspQI GCTCTTC 2 cut(s) 3075, 3108
BspT107I GGYRCC 2 cut(s) 1439, 2712
BspTI CTTAAG 1 cut(s) 1786
BspTNI GGTCTC 2 cut(s) 449, 2402
BsrBI CCGCTC 1 cut(s) 3402
BsrDI GCAATG 5 cut(s) 658, 1494, 2226, 3027, 3609
BssECI CCNNGG 6 cut(s) 400, 2236, 2617, 3393, 3442, 3686
BssNI GRCGYC 1 cut(s) 3188
BssT1I CCWWGG 3 cut(s) 400, 2236, 2617
Bst4CI ACNGT 8 cut(s) 451, 1028, 2285, 2744, 2918, 2935, 3454, 4036
Bst6I CTCTTC 7 cut(s) 1251, 2484, 2550, 2796, 3075, 3108, 3270
BstACI GRCGYC 1 cut(s) 3188
BstAFI CTTAAG 1 cut(s) 1786
BstAPI GCANNNNNTGC 3 cut(s) 1716, 3464, 3620
BstBAI YACGTR 2 cut(s) 3037, 3617
BstC8I GCNNGC 2 cut(s) 225, 1678
BstDSI CCRYGG 3 cut(s) 2236, 3393, 3442
BstENI CCTNNNNNAGG 2 cut(s) 2388, 3935
BstFNI CGCG 2 cut(s) 2566, 3395
BstHHI GCGC 4 cut(s) 639, 2255, 2412, 2568
BstNSI RCATGY 7 cut(s) 227, 972, 1301, 1469, 1763, 1780, 3003
BstSCI CCNGG 2 cut(s) 3685, 3686
BstSFI CTRYAG 1 cut(s) 4035
BstSLI GKGCMC 1 cut(s) 2717
BstUI CGCG 2 cut(s) 2566, 3395
BstV1I GCAGC 7 cut(s) 46, 96, 2237, 2555, 2663, 2666, 3622
BstV2I GAAGAC 4 cut(s) 216, 711, 942, 2144
BstX2I RGATCY 5 cut(s) 1082, 1877, 3135, 3583, 3902
BstYI RGATCY 5 cut(s) 1082, 1877, 3135, 3583, 3902
Bsu15I ATCGAT 1 cut(s) 3822
Bsu36I CCTNAGG 1 cut(s) 2718
BsuRI GGCC 9 cut(s) 50, 600, 1596, 1740, 2607, 3148, 3405, 3415, 3539
BsuTUI ATCGAT 1 cut(s) 3822
BtgI CCRYGG 3 cut(s) 2236, 3393, 3442
BtrI CACGTC 1 cut(s) 4020
BtsI GCAGTG 2 cut(s) 436, 2645
BtsIMutI CAGTG 8 cut(s) 126, 436, 1837, 2281, 2645, 2914, 3016, 3450
BveI ACCTGC 2 cut(s) 3725, 3928
Cac8I GCNNGC 2 cut(s) 225, 1678
CfoI GCGC 4 cut(s) 639, 2255, 2412, 2568
Cfr13I GGNCC 8 cut(s) 826, 1397, 1738, 1978, 2605, 3404, 3602, 3854
Cfr42I CCGCGG 1 cut(s) 3396
Cfr9I CCCGGG 1 cut(s) 3686
ClaI ATCGAT 1 cut(s) 3822
CseI GACGC 1 cut(s) 3976
Csp6I GTAC 7 cut(s) 870, 1586, 2751, 2853, 3551, 3726, 3941
CspCI CAANNNNNGTGG 4 cut(s) 432, 467, 574, 609
CviQI GTAC 7 cut(s) 870, 1586, 2751, 2853, 3551, 3726, 3941
DraI TTTAAA 2 cut(s) 1237, 3489
DrdI GACNNNNNNGTC 1 cut(s) 2148
DriI GACNNNNNGTC 1 cut(s) 1026
DseDI GACNNNNNNGTC 1 cut(s) 2148
EaeI YGGCCR 1 cut(s) 3146
Eam1104I CTCTTC 7 cut(s) 1251, 2484, 2550, 2796, 3075, 3108, 3270
Eam1105I GACNNNNNGTC 1 cut(s) 1026
EarI CTCTTC 7 cut(s) 1251, 2484, 2550, 2796, 3075, 3108, 3270
Eco130I CCWWGG 3 cut(s) 400, 2236, 2617
Eco147I AGGCCT 2 cut(s) 600, 1596
Eco31I GGTCTC 2 cut(s) 449, 2402
Eco47I GGWCC 5 cut(s) 826, 1397, 1978, 3602, 3854
Eco57I CTGAAG 4 cut(s) 59, 1397, 3089, 3958
Eco81I CCTNAGG 1 cut(s) 2718
Eco88I CYCGRG 1 cut(s) 3686
EcoNI CCTNNNNNAGG 2 cut(s) 2388, 3935
EcoO109I RGGNCCY 2 cut(s) 1978, 2605
EcoRI GAATTC 1 cut(s) 68
EcoT14I CCWWGG 3 cut(s) 400, 2236, 2617
ErhI CCWWGG 3 cut(s) 400, 2236, 2617
Esp3I CGTCTC 2 cut(s) 2893, 3053
FalI AAGNNNNNCTT 6 cut(s) 806, 838, 837, 869, 3482, 3514
FaqI GGGAC 5 cut(s) 701, 1712, 2154, 2599, 3354
FbaI TGATCA 3 cut(s) 1284, 3655, 3915
FblI GTMKAC 1 cut(s) 3004
FspBI CTAG 7 cut(s) 1401, 2148, 2363, 2462, 2927, 3644, 3899
FspI TGCGCA 2 cut(s) 2254, 2411
GlaI GCGC 4 cut(s) 638, 2254, 2411, 2567
GsuI CTGGAG 3 cut(s) 248, 1481, 2341
HaeIII GGCC 9 cut(s) 50, 600, 1596, 1740, 2607, 3148, 3405, 3415, 3539
HapII CCGG 5 cut(s) 695, 1328, 2156, 2213, 3687
HgaI GACGC 1 cut(s) 3976
HhaI GCGC 4 cut(s) 639, 2255, 2412, 2568
Hin1I GRCGYC 1 cut(s) 3188
Hin6I GCGC 4 cut(s) 637, 2253, 2410, 2566
HinP1I GCGC 4 cut(s) 637, 2253, 2410, 2566
HincII GTYRAC 4 cut(s) 1149, 1530, 1570, 2624
HindII GTYRAC 4 cut(s) 1149, 1530, 1570, 2624
HindIII AAGCTT 4 cut(s) 188, 203, 1544, 3512
HpaI GTTAAC 1 cut(s) 1530
HpaII CCGG 5 cut(s) 695, 1328, 2156, 2213, 3687
HphI GGTGA 6 cut(s) 208, 362, 848, 3034, 3328, 3753
Hpy166II GTNNAC 7 cut(s) 1149, 1530, 1570, 2450, 2624, 2855, 3005
Hpy8I GTNNAC 7 cut(s) 1149, 1530, 1570, 2450, 2624, 2855, 3005
Hpy99I CGWCG 1 cut(s) 2829
HpyAV CCTTC 8 cut(s) 470, 567, 1372, 1586, 2768, 3321, 3550, 3966
HpyCH4III ACNGT 8 cut(s) 451, 1028, 2285, 2744, 2918, 2935, 3454, 4036
HpyCH4IV ACGT 7 cut(s) 939, 2516, 2582, 3036, 3188, 3616, 4019
HpySE526I ACGT 7 cut(s) 939, 2516, 2582, 3036, 3188, 3616, 4019
Hsp92I GRCGYC 1 cut(s) 3188
HspAI GCGC 4 cut(s) 637, 2253, 2410, 2566
Kpn2I TCCGGA 2 cut(s) 2155, 2212
Ksp22I TGATCA 3 cut(s) 1284, 3655, 3915
KspAI GTTAAC 1 cut(s) 1530
KspI CCGCGG 1 cut(s) 3396
LguI GCTCTTC 2 cut(s) 3075, 3108
LmnI GCTCC 5 cut(s) 1462, 2020, 2236, 2360, 3275
Lsp1109I GCAGC 7 cut(s) 46, 96, 2237, 2555, 2663, 2666, 3622
MaeI CTAG 7 cut(s) 1401, 2148, 2363, 2462, 2927, 3644, 3899
MaeII ACGT 7 cut(s) 939, 2516, 2582, 3036, 3188, 3616, 4019
MaeIII GTNAC 6 cut(s) 431, 940, 1814, 1844, 2722, 3706
MbiI CCGCTC 1 cut(s) 3402
MfeI CAATTG 6 cut(s) 278, 1137, 2003, 2736, 3056, 3364
MflI RGATCY 5 cut(s) 1082, 1877, 3135, 3583, 3902
MhlI GDGCHC 4 cut(s) 28, 126, 2017, 2717
MlyI GAGTC 6 cut(s) 125, 794, 2191, 2375, 2795, 3788
MmeI TCCRAC 4 cut(s) 219, 514, 853, 2319
MroI TCCGGA 2 cut(s) 2155, 2212
MroXI GAANNNNTTC 2 cut(s) 72, 3174
MslI CAYNNNNRTG 1 cut(s) 228
MspA1I CMGCKG 1 cut(s) 3395
MspCI CTTAAG 1 cut(s) 1786
MspI CCGG 5 cut(s) 695, 1328, 2156, 2213, 3687
MspR9I CCNGG 2 cut(s) 3687, 3688
MunI CAATTG 6 cut(s) 278, 1137, 2003, 2736, 3056, 3364
Mva1269I GAATGC 1 cut(s) 1900
MvnI CGCG 2 cut(s) 2566, 3395
NciI CCSGG 2 cut(s) 3687, 3688
NcoI CCATGG 1 cut(s) 2236
NlaIV GGNNCC 3 cut(s) 1441, 2714, 3495
NmeAIII GCCGAG 2 cut(s) 1155, 1924
NmuCI GTSAC 2 cut(s) 431, 1844
NsbI TGCGCA 2 cut(s) 2254, 2411
NspI RCATGY 7 cut(s) 227, 972, 1301, 1469, 1763, 1780, 3003
PaeI GCATGC 1 cut(s) 227
PceI AGGCCT 2 cut(s) 600, 1596
PciI ACATGT 3 cut(s) 1297, 1759, 2999
PciSI GCTCTTC 2 cut(s) 3075, 3108
PcsI WCGNNNNNNNCGW 2 cut(s) 2989, 3828
PctI GAATGC 1 cut(s) 1900
PdmI GAANNNNTTC 2 cut(s) 72, 3174
PflFI GACNNNGTC 2 cut(s) 824, 2916
PflMI CCANNNNNTGG 2 cut(s) 3325, 3890
PleI GAGTC 6 cut(s) 124, 794, 2190, 2374, 2794, 3787
PpsI GAGTC 6 cut(s) 124, 794, 2190, 2374, 2794, 3787
Ppu21I YACGTR 2 cut(s) 3037, 3617
PpuMI RGGWCCY 1 cut(s) 1978
PscI ACATGT 3 cut(s) 1297, 1759, 2999
PshBI ATTAAT 1 cut(s) 3630
PsiI TTATAA 1 cut(s) 3870
Psp5II RGGWCCY 1 cut(s) 1978
PspN4I GGNNCC 3 cut(s) 1441, 2714, 3495
PspPI GGNCC 8 cut(s) 826, 1397, 1738, 1978, 2605, 3404, 3602, 3854
PspPPI RGGWCCY 1 cut(s) 1978
PsuI RGATCY 5 cut(s) 1082, 1877, 3135, 3583, 3902
PsyI GACNNNGTC 2 cut(s) 824, 2916
RsaI GTAC 7 cut(s) 871, 1587, 2752, 2854, 3552, 3727, 3942
RsaNI GTAC 7 cut(s) 870, 1586, 2751, 2853, 3551, 3726, 3941
RseI CAYNNNNRTG 1 cut(s) 228
SacII CCGCGG 1 cut(s) 3396
SapI GCTCTTC 2 cut(s) 3075, 3108
Sau96I GGNCC 8 cut(s) 826, 1397, 1738, 1978, 2605, 3404, 3602, 3854
ScaI AGTACT 1 cut(s) 871
SchI GAGTC 6 cut(s) 125, 794, 2191, 2375, 2795, 3788
ScrFI CCNGG 2 cut(s) 3687, 3688
SduI GDGCHC 4 cut(s) 28, 126, 2017, 2717
SfcI CTRYAG 1 cut(s) 4035
Sfr303I CCGCGG 1 cut(s) 3396
SgrBI CCGCGG 1 cut(s) 3396
SinI GGWCC 5 cut(s) 826, 1397, 1978, 3602, 3854
SmaI CCCGGG 1 cut(s) 3688
SmiMI CAYNNNNRTG 1 cut(s) 228
SpeI ACTAGT 1 cut(s) 2147
SphI GCATGC 1 cut(s) 227
SseBI AGGCCT 2 cut(s) 600, 1596
SsiI CCGC 8 cut(s) 161, 409, 2189, 2394, 2808, 3393, 3395, 3402
SspI AATATT 1 cut(s) 902
SspMI CTAG 7 cut(s) 1401, 2148, 2363, 2462, 2927, 3644, 3899
StuI AGGCCT 2 cut(s) 600, 1596
StyD4I CCNGG 2 cut(s) 3685, 3686
StyI CCWWGG 3 cut(s) 400, 2236, 2617
TaaI ACNGT 8 cut(s) 451, 1028, 2285, 2744, 2918, 2935, 3454, 4036
TaiI ACGT 7 cut(s) 942, 2519, 2585, 3039, 3191, 3619, 4022
TaqI TCGA 8 cut(s) 785, 1536, 2136, 2548, 2761, 2827, 2983, 3822
TatI WGTACW 4 cut(s) 869, 1585, 2750, 2852
TauI GCSGC 3 cut(s) 411, 2811, 3405
TscAI CASTG 8 cut(s) 126, 436, 1837, 2288, 2645, 2921, 3016, 3457
TseFI GTSAC 2 cut(s) 431, 1844
TseI GCWGC 7 cut(s) 59, 109, 2250, 2568, 2676, 2679, 3635
Tsp45I GTSAC 2 cut(s) 431, 1844
TspGWI ACGGA 6 cut(s) 962, 2813, 2954, 3237, 3304, 3431
TspMI CCCGGG 1 cut(s) 3686
TspRI CASTG 8 cut(s) 126, 436, 1837, 2288, 2645, 2921, 3016, 3457
Tth111I GACNNNGTC 2 cut(s) 824, 2916
Van91I CCANNNNNTGG 2 cut(s) 3325, 3890
Vha464I CTTAAG 1 cut(s) 1786
VpaK11BI GGWCC 5 cut(s) 826, 1397, 1978, 3602, 3854
VspI ATTAAT 1 cut(s) 3630
XagI CCTNNNNNAGG 2 cut(s) 2388, 3935
XbaI TCTAGA 2 cut(s) 2362, 2926
XceI RCATGY 7 cut(s) 227, 972, 1301, 1469, 1763, 1780, 3003
XcmI CCANNNNNNNNNTGG 1 cut(s) 871
XmaI CCCGGG 1 cut(s) 3686
XmiI GTMKAC 1 cut(s) 3004
XmnI GAANNNNTTC 2 cut(s) 72, 3174
XspI CTAG 7 cut(s) 1401, 2148, 2363, 2462, 2927, 3644, 3899
ZraI GACGTC 1 cut(s) 3189
ZrmI AGTACT 1 cut(s) 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.