RchiOBHm_Chr4g0422461

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
48039520 .. 48041647
2128 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39199

Sequence Viewer

Length: 1908 bp
ATGCGCTCTAAAACAAGTGATGAATGGCGATCAATTTTAAAAAGTAAAACATGGGATTCACCAGAAGGAGAAAAGAGAATTTTTCCAATTTTGAAGTTGAGTTTTGATGACCTGAAACCTCCATCCTTGAAACAATGTTTTGCATATTGCTCGATGTTCGTCAAAGATTTTGATATTGAAAAGGATGACTTGATCCAACTTTGGATGGCTCAGGGATGGCTTCACCCTTTTTCTGACAAAAGCCTAGAGATGGAGGAGAGAGGTAATGAATATTTTAAAATCCTATTGGCGAAGTCTTTTTTTCAAGACGTTACAAAGGATTATGGTGGTAATGTTACCAAATGTAAGATGCACGATCTTGTGCATGATCTTGCAGAACATGTATCAAAATCAAGGAACTTATGCTCACTTTTTTCAAATGGAGAAGTCCTTGGGAGCAACTTACTTAACTTCAAATCTTTACGTGTGTTAAATTTATACAAAGCAGACATTATGGAGTTGCCAATTTCAATTGGGAAGTTGAAACACTTGAGGTACTTGAATGTTTTGAAAACAAGAATCAAAACATTTCCCAAATCAATTGGTCAGCTTTATAACCTGCAGACATTAAAAATACATTATCAGCTTGAAGAATTTCCAAGGGAAATTGCAAATTTAATCAACTTGCGGCACATTTATTTTGGTAGATATATGAAAGTTCCAGGTGGGATATTGAGACAGTTGACTAATCTCCGGTCATTACCTTTTCTCAAGGTGGGTAACAAGACAGGTCCTGGAATTGAGGAATTGGGTTGTTTAAACCAGTTGCATGACACCTTGTCTATATATGGATTGGAAAATGTAGGAGATGGAGGAGAAGCTTCGAAAGCAAACTTGGTCGAGAAGAAACATATACGCAAGTTAATCCTTGATTGGAAGCCTAGTAGGCCAAGCCACAATGTGGAGAATGATGATGATGTACTAGAAGGCCTCCGCCCACATTCTAGTTTGGAATTTTTGGAGATTCAGGGATTCATGGGTGTTAAACTTCCATCATGGTTATTGCTAGCCCACAATTTGAAGGAGATTGAATTATTGGGCTGCAACAAATGTGAAGGAGTCCCAGTGCTTGGCCATTTACCCAATCTTAGTTGTGTTAAGATTATGAGAATGGAGAACCTAACTCGTATAGGATCTGAGTTCTATGGTGATGACCATGTCAACTGTGGAAATGGATCAAGTAAGGAGCCGCGGCCTTTGTTCCCTGCTTTGAAAACATTGCATATTGAGGGGGCCCAAAACCTGATCGAGTGGATGGAAGCGCCAAGAGAAAGAGCAAGTGTGGTGTTTCCATGCCTCGAGGAGCTGACCTTGATTAAATGTCACAAACTAACTAGTGCTCCCAGTCATTTCCCATCTCTCAAGAAGTTGGTGATAGAATGGATGGATAGCGGAGGCATGCCAATAGCAAGTATTCTAAGCAATCAACTCACCACTCTCACTTATCTTAGCTTTCTGGGTGTGAAGGGCCTTACTTGTCTGCCGGGAGGGATGTTAGAAAAAAACAAGAATCTTGCACATTTAGACATAAGTCAGTGTTCAGATTTAACTTGTATTTCTCCCCAATCACAAGGATTTGAGTACTGCTGCGCATCTCTTTCATATTTGCGGATACGGATTTGTCACTATCTCAGATATTTACCTGATGGGCTACTCACTCCTTCTCTTAAAGAGATGGAGTTGTATTATTGTCCCAATCTACAGTACATCCCAGATGCTACACACGGTGGTCTCACATCCCTTGAAACGTTGTCTTTGACATTGTGCTGTGATATAACTTCCATTCCTTTTTCACAAGGCCTGCCAGCTCTTGGTAAATTACATATAGACCAGTGTTGGGAATTATCAAGCCTCCCTCTGGTGGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

635

Amino Acids

71.87

Weight (kDa)

7.04

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 52 - 125 1.6e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 138 - 386 6.2e-28 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 260 - 384 1.6e-35 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 594
AbsI CCTCGAGG 1 cut(s) 1337
Acc16I TGCGCA 1 cut(s) 1630
Acc36I ACCTGC 1 cut(s) 606
AccB7I CCANNNNNTGG 3 cut(s) 940, 1109, 1850
AccII CGCG 1 cut(s) 1231
AciI CCGC 6 cut(s) 667, 973, 1229, 1231, 1431, 1648
AclI AACGTT 1 cut(s) 1787
AclWI GGATC 3 cut(s) 187, 1180, 1222
AcoI YGGCCR 1 cut(s) 1111
AcsI RAATTY 5 cut(s) 78, 472, 632, 652, 992
AdeI CACNNNGTG 2 cut(s) 940, 1766
AfaI GTAC 4 cut(s) 536, 960, 1622, 1745
AfiI CCNNNNNNNGG 7 cut(s) 250, 940, 1109, 1850, 1876, 1897, 1900
AflIII ACRYGT 2 cut(s) 379, 463
AhdI GACNNNNNGTC 1 cut(s) 817
AhlI ACTAGT 1 cut(s) 1373
AjnI CCWGG 2 cut(s) 700, 772
AjuI GAANNNNNNNTTGG 2 cut(s) 857, 889
AluBI AGCT 6 cut(s) 589, 625, 860, 1345, 1491, 1847
AluI AGCT 6 cut(s) 589, 625, 860, 1345, 1491, 1847
Alw21I GWGCWC 1 cut(s) 1381
Alw26I GTCTC 2 cut(s) 709, 1775
AlwI GGATC 3 cut(s) 187, 1180, 1222
AlwNI CAGNNNCTG 1 cut(s) 773
Ama87I CYCGRG 1 cut(s) 1337
AoxI GGCC 7 cut(s) 926, 967, 1111, 1232, 1272, 1507, 1837
ApaI GGGCCC 1 cut(s) 1276
ApeKI GCWGC 2 cut(s) 1080, 1626
ApoI RAATTY 5 cut(s) 78, 472, 632, 652, 992
Asp700I GAANNNNTTC 1 cut(s) 633
AspLEI GCGC 3 cut(s) 6, 1303, 1631
AspS9I GGNCC 4 cut(s) 770, 1272, 1273, 1507
AsuC2I CCSGG 1 cut(s) 1524
AsuHPI GGTGA 5 cut(s) 51, 215, 1199, 1423, 1462
AsuII TTCGAA 1 cut(s) 863
AsuNHI GCTAGC 1 cut(s) 1045
AvaI CYCGRG 1 cut(s) 1337
AvaII GGWCC 1 cut(s) 770
BaeGI GKGCMC 1 cut(s) 1276
BalI TGGCCA 1 cut(s) 1113
BanII GRGCYC 1 cut(s) 1276
Bbv12I GWGCWC 1 cut(s) 1381
BbvI GCAGC 2 cut(s) 1067, 1613
BcgI CGANNNNNNTGC 2 cut(s) 132, 166
BciT130I CCWGG 2 cut(s) 702, 774
BciVI GTATCC 1 cut(s) 1644
BcnI CCSGG 1 cut(s) 1524
BcoDI GTCTC 2 cut(s) 709, 1775
BcuI ACTAGT 1 cut(s) 1373
BfaI CTAG 7 cut(s) 245, 921, 962, 984, 1046, 1374, 1906
BfmI CTRYAG 2 cut(s) 599, 1739
BfoI RGCGCY 1 cut(s) 1304
BfuAI ACCTGC 1 cut(s) 606
BfuI GTATCC 1 cut(s) 1644
BglI GCCNNNNNGGC 1 cut(s) 925
BisI GCNGC 5 cut(s) 668, 1081, 1229, 1232, 1627
BlsI GCNGC 5 cut(s) 669, 1082, 1230, 1233, 1628
BmcAI AGTACT 1 cut(s) 1622
Bme1390I CCNGG 3 cut(s) 702, 774, 1524
Bme18I GGWCC 1 cut(s) 770
BmeRI GACNNNNNGTC 1 cut(s) 817
BmeT110I CYCGRG 1 cut(s) 1337
BmgT120I GGNCC 4 cut(s) 770, 1272, 1273, 1507
BmiI GGNNCC 3 cut(s) 1227, 1273, 1274
BmrFI CCNGG 3 cut(s) 702, 774, 1524
BmrI ACTGGG 2 cut(s) 1097, 1377
BmsI GCATC 3 cut(s) 339, 1640, 1744
BmtI GCTAGC 1 cut(s) 1049
BmuI ACTGGG 2 cut(s) 1097, 1377
BoxI GACNNNNGTC 1 cut(s) 1569
Bpu10I CCTNAGC 1 cut(s) 210
Bpu14I TTCGAA 1 cut(s) 863
BpuEI CTTGAG 3 cut(s) 550, 734, 1385
BpuMI CCSGG 1 cut(s) 1524
BsaAI YACGTR 1 cut(s) 464
BsaI GGTCTC 1 cut(s) 1775
BsaJI CCNNGG 3 cut(s) 430, 638, 1229
BsaWI WCCGGW 1 cut(s) 732
BsaXI ACNNNNNCTCC 4 cut(s) 1089, 1119, 1363, 1393
Bsc4I CCNNNNNNNGG 7 cut(s) 250, 940, 1109, 1850, 1876, 1897, 1900
Bse1I ACTGG 4 cut(s) 802, 1103, 1383, 1870
Bse3DI GCAATG 1 cut(s) 1256
BseBI CCWGG 2 cut(s) 702, 774
BseDI CCNNGG 3 cut(s) 430, 638, 1229
BseGI GGATG 9 cut(s) 122, 190, 210, 221, 1299, 1428, 1536, 1746, 1775
BseLI CCNNNNNNNGG 7 cut(s) 250, 940, 1109, 1850, 1876, 1897, 1900
BseMI GCAATG 1 cut(s) 1256
BseMII CTCAG 3 cut(s) 224, 1167, 1684
BseNI ACTGG 4 cut(s) 802, 1103, 1383, 1870
BseRI GAGGAG 3 cut(s) 269, 867, 1355
BseSI GKGCMC 1 cut(s) 1276
BseXI GCAGC 2 cut(s) 1067, 1613
Bsh1236I CGCG 1 cut(s) 1231
BshFI GGCC 7 cut(s) 928, 969, 1113, 1234, 1274, 1509, 1839
BsiHKAI GWGCWC 1 cut(s) 1381
BsiHKCI CYCGRG 1 cut(s) 1337
BsiSI CCGG 2 cut(s) 733, 1523
BslFI GGGAC 2 cut(s) 1085, 1716
BslI CCNNNNNNNGG 7 cut(s) 250, 940, 1109, 1850, 1876, 1897, 1900
BsmAI GTCTC 2 cut(s) 709, 1775
BsmFI GGGAC 2 cut(s) 1085, 1716
BsnI GGCC 7 cut(s) 928, 969, 1113, 1234, 1274, 1509, 1839
Bso31I GGTCTC 1 cut(s) 1775
BsoBI CYCGRG 1 cut(s) 1337
Bsp119I TTCGAA 1 cut(s) 863
Bsp120I GGGCCC 1 cut(s) 1272
Bsp1286I GDGCHC 2 cut(s) 1276, 1381
Bsp143I GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
BspACI CCGC 6 cut(s) 667, 973, 1229, 1231, 1431, 1648
BspANI GGCC 7 cut(s) 928, 969, 1113, 1234, 1274, 1509, 1839
BspCNI CTCAG 3 cut(s) 223, 1168, 1683
BspFNI CGCG 1 cut(s) 1231
BspLI GGNNCC 3 cut(s) 1227, 1273, 1274
BspMAI CTGCAG 1 cut(s) 603
BspMI ACCTGC 1 cut(s) 606
BspOI GCTAGC 1 cut(s) 1049
BspPI GGATC 3 cut(s) 187, 1180, 1222
BspT104I TTCGAA 1 cut(s) 863
BspTNI GGTCTC 1 cut(s) 1775
BsrDI GCAATG 1 cut(s) 1256
BsrI ACTGG 4 cut(s) 802, 1103, 1383, 1870
BssECI CCNNGG 3 cut(s) 430, 638, 1229
BssMI GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
BssT1I CCWWGG 2 cut(s) 430, 638
Bst2UI CCWGG 2 cut(s) 702, 774
Bst4CI ACNGT 4 cut(s) 720, 1205, 1743, 1766
BstBAI YACGTR 1 cut(s) 464
BstBI TTCGAA 1 cut(s) 863
BstC8I GCNNGC 4 cut(s) 1047, 1439, 1841, 1845
BstDEI CTNAG 6 cut(s) 210, 1127, 1176, 1457, 1487, 1670
BstDSI CCRYGG 1 cut(s) 1229
BstF5I GGATG 9 cut(s) 122, 190, 210, 221, 1299, 1428, 1536, 1746, 1775
BstFNI CGCG 1 cut(s) 1231
BstH2I RGCGCY 1 cut(s) 1304
BstHHI GCGC 3 cut(s) 6, 1303, 1631
BstKTI GATC 7 cut(s) 32, 195, 358, 370, 1175, 1217, 1287
BstMAI GTCTC 2 cut(s) 709, 1775
BstMBI GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
BstMWI GCNNNNNNNGC 2 cut(s) 866, 925
BstNI CCWGG 2 cut(s) 702, 774
BstNSI RCATGY 2 cut(s) 383, 1441
BstPAI GACNNNNGTC 1 cut(s) 1569
BstSCI CCNGG 3 cut(s) 700, 772, 1522
BstSFI CTRYAG 2 cut(s) 599, 1739
BstSLI GKGCMC 1 cut(s) 1276
BstUI CGCG 1 cut(s) 1231
BstV1I GCAGC 2 cut(s) 1067, 1613
BstX2I RGATCY 1 cut(s) 1172
BstYI RGATCY 1 cut(s) 1172
BsuI GTATCC 1 cut(s) 1644
BsuRI GGCC 7 cut(s) 928, 969, 1113, 1234, 1274, 1509, 1839
BtgI CCRYGG 1 cut(s) 1229
BtsCI GGATG 9 cut(s) 122, 190, 210, 221, 1299, 1428, 1536, 1746, 1775
BtsIMutI CAGTG 3 cut(s) 1110, 1580, 1877
BveI ACCTGC 1 cut(s) 606
Cac8I GCNNGC 4 cut(s) 1047, 1439, 1841, 1845
CaiI CAGNNNCTG 1 cut(s) 773
CfoI GCGC 3 cut(s) 6, 1303, 1631
Cfr13I GGNCC 4 cut(s) 770, 1272, 1273, 1507
Cfr42I CCGCGG 1 cut(s) 1232
Csp6I GTAC 4 cut(s) 535, 959, 1621, 1744
CviAII CATG 9 cut(s) 51, 365, 380, 809, 1015, 1035, 1196, 1332, 1438
CviQI GTAC 4 cut(s) 535, 959, 1621, 1744
DdeI CTNAG 6 cut(s) 210, 1127, 1176, 1457, 1487, 1670
DpnI GATC 7 cut(s) 31, 194, 357, 369, 1174, 1216, 1286
DpnII GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
DraI TTTAAA 3 cut(s) 39, 277, 798
DraIII CACNNNGTG 2 cut(s) 940, 1766
DriI GACNNNNNGTC 1 cut(s) 817
EaeI YGGCCR 1 cut(s) 1111
Eam1105I GACNNNNNGTC 1 cut(s) 817
EciI GGCGGA 1 cut(s) 962
Eco130I CCWWGG 2 cut(s) 430, 638
Eco147I AGGCCT 2 cut(s) 969, 1839
Eco24I GRGCYC 1 cut(s) 1276
Eco31I GGTCTC 1 cut(s) 1775
Eco47I GGWCC 1 cut(s) 770
Eco88I CYCGRG 1 cut(s) 1337
EcoO109I RGGNCCY 3 cut(s) 770, 1272, 1507
EcoRII CCWGG 2 cut(s) 700, 772
EcoT14I CCWWGG 2 cut(s) 430, 638
EcoT38I GRGCYC 1 cut(s) 1276
ErhI CCWWGG 2 cut(s) 430, 638
FaeI CATG 9 cut(s) 54, 368, 383, 812, 1018, 1038, 1199, 1335, 1441
FalI AAGNNNNNCTT 2 cut(s) 173, 205
FaqI GGGAC 2 cut(s) 1085, 1716
FatI CATG 9 cut(s) 50, 364, 379, 808, 1014, 1034, 1195, 1331, 1437
Fnu4HI GCNGC 5 cut(s) 668, 1081, 1229, 1232, 1627
FokI GGATG 9 cut(s) 109, 197, 217, 228, 1306, 1435, 1543, 1733, 1762
FriOI GRGCYC 1 cut(s) 1276
Fsp4HI GCNGC 5 cut(s) 668, 1081, 1229, 1232, 1627
FspBI CTAG 7 cut(s) 245, 921, 962, 984, 1046, 1374, 1906
FspI TGCGCA 1 cut(s) 1630
GlaI GCGC 3 cut(s) 5, 1302, 1630
GluI GCNGC 5 cut(s) 668, 1081, 1229, 1232, 1627
HaeII RGCGCY 1 cut(s) 1304
HaeIII GGCC 7 cut(s) 928, 969, 1113, 1234, 1274, 1509, 1839
HapII CCGG 2 cut(s) 733, 1523
HhaI GCGC 3 cut(s) 6, 1303, 1631
Hin1II CATG 9 cut(s) 54, 368, 383, 812, 1018, 1038, 1199, 1335, 1441
Hin6I GCGC 3 cut(s) 4, 1301, 1629
HinP1I GCGC 3 cut(s) 4, 1301, 1629
HincII GTYRAC 2 cut(s) 723, 1201
HindII GTYRAC 2 cut(s) 723, 1201
HindIII AAGCTT 1 cut(s) 858
HinfI GANTC 6 cut(s) 56, 558, 1003, 1011, 1098, 1549
HpaII CCGG 2 cut(s) 733, 1523
HphI GGTGA 5 cut(s) 51, 215, 1199, 1423, 1462
Hpy166II GTNNAC 3 cut(s) 723, 1201, 1903
Hpy188I TCNGA 4 cut(s) 235, 1177, 1582, 1673
Hpy188III TCNNGA 3 cut(s) 305, 880, 1402
Hpy8I GTNNAC 3 cut(s) 723, 1201, 1903
HpyAV CCTTC 6 cut(s) 59, 959, 1054, 1088, 1498, 1710
HpyCH4III ACNGT 4 cut(s) 720, 1205, 1743, 1766
HpyCH4IV ACGT 3 cut(s) 309, 463, 1787
HpyF10VI GCNNNNNNNGC 2 cut(s) 866, 925
HpyF3I CTNAG 6 cut(s) 210, 1127, 1176, 1457, 1487, 1670
HpySE526I ACGT 3 cut(s) 309, 463, 1787
Hsp92II CATG 9 cut(s) 54, 368, 383, 812, 1018, 1038, 1199, 1335, 1441
HspAI GCGC 3 cut(s) 4, 1301, 1629
KspI CCGCGG 1 cut(s) 1232
Kzo9I GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
LmnI GCTCC 4 cut(s) 435, 1225, 1342, 1384
Lsp1109I GCAGC 2 cut(s) 1067, 1613
LweI GCATC 3 cut(s) 339, 1640, 1744
MaeI CTAG 7 cut(s) 245, 921, 962, 984, 1046, 1374, 1906
MaeII ACGT 3 cut(s) 309, 463, 1787
MaeIII GTNAC 5 cut(s) 310, 334, 758, 1361, 1661
MalI GATC 7 cut(s) 31, 194, 357, 369, 1174, 1216, 1286
MboI GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
MboII GAAGA 2 cut(s) 641, 895
MfeI CAATTG 2 cut(s) 510, 579
MflI RGATCY 1 cut(s) 1172
MhlI GDGCHC 2 cut(s) 1276, 1381
MlsI TGGCCA 1 cut(s) 1113
MluNI TGGCCA 1 cut(s) 1113
MlyI GAGTC 1 cut(s) 1107
MmeI TCCRAC 1 cut(s) 220
Mox20I TGGCCA 1 cut(s) 1113
MroXI GAANNNNTTC 1 cut(s) 633
MscI TGGCCA 1 cut(s) 1113
Msp20I TGGCCA 1 cut(s) 1113
MspA1I CMGCKG 1 cut(s) 1231
MspI CCGG 2 cut(s) 733, 1523
MspR9I CCNGG 3 cut(s) 702, 774, 1524
MssI GTTTAAAC 1 cut(s) 798
MunI CAATTG 2 cut(s) 510, 579
MvaI CCWGG 2 cut(s) 702, 774
MvnI CGCG 1 cut(s) 1231
MwoI GCNNNNNNNGC 2 cut(s) 866, 925
NciI CCSGG 1 cut(s) 1524
NdeII GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
NheI GCTAGC 1 cut(s) 1045
NlaIII CATG 9 cut(s) 54, 368, 383, 812, 1018, 1038, 1199, 1335, 1441
NlaIV GGNNCC 3 cut(s) 1227, 1273, 1274
NmuCI GTSAC 2 cut(s) 1361, 1661
NsbI TGCGCA 1 cut(s) 1630
NspI RCATGY 2 cut(s) 383, 1441
NspV TTCGAA 1 cut(s) 863
PaeI GCATGC 1 cut(s) 1441
PaeR7I CTCGAG 1 cut(s) 1337
PceI AGGCCT 2 cut(s) 969, 1839
PciI ACATGT 1 cut(s) 379
PdmI GAANNNNTTC 1 cut(s) 633
PfeI GAWTC 5 cut(s) 56, 558, 1003, 1011, 1549
PflFI GACNNNGTC 1 cut(s) 1196
PflMI CCANNNNNTGG 3 cut(s) 940, 1109, 1850
PfoI TCCNGGA 1 cut(s) 772
PkrI GCNGC 5 cut(s) 669, 1082, 1230, 1233, 1628
PleI GAGTC 1 cut(s) 1106
PmeI GTTTAAAC 1 cut(s) 798
PpsI GAGTC 1 cut(s) 1106
Ppu21I YACGTR 1 cut(s) 464
PpuMI RGGWCCY 1 cut(s) 770
PscI ACATGT 1 cut(s) 379
PshAI GACNNNNGTC 1 cut(s) 1569
PsiI TTATAA 1 cut(s) 594
Psp1406I AACGTT 1 cut(s) 1787
Psp5II RGGWCCY 1 cut(s) 770
Psp6I CCWGG 2 cut(s) 700, 772
PspGI CCWGG 2 cut(s) 700, 772
PspN4I GGNNCC 3 cut(s) 1227, 1273, 1274
PspOMI GGGCCC 1 cut(s) 1272
PspPI GGNCC 4 cut(s) 770, 1272, 1273, 1507
PspPPI RGGWCCY 1 cut(s) 770
PspXI VCTCGAGB 1 cut(s) 1337
PstI CTGCAG 1 cut(s) 603
PstNI CAGNNNCTG 1 cut(s) 773
PsuI RGATCY 1 cut(s) 1172
PsyI GACNNNGTC 1 cut(s) 1196
RsaI GTAC 4 cut(s) 536, 960, 1622, 1745
RsaNI GTAC 4 cut(s) 535, 959, 1621, 1744
SacII CCGCGG 1 cut(s) 1232
SatI GCNGC 5 cut(s) 668, 1081, 1229, 1232, 1627
Sau3AI GATC 7 cut(s) 29, 192, 355, 367, 1172, 1214, 1284
Sau96I GGNCC 4 cut(s) 770, 1272, 1273, 1507
ScaI AGTACT 1 cut(s) 1622
SchI GAGTC 1 cut(s) 1107
ScrFI CCNGG 3 cut(s) 702, 774, 1524
SduI GDGCHC 2 cut(s) 1276, 1381
SfaNI GCATC 3 cut(s) 339, 1640, 1744
SfcI CTRYAG 2 cut(s) 599, 1739
Sfr274I CTCGAG 1 cut(s) 1337
Sfr303I CCGCGG 1 cut(s) 1232
SfuI TTCGAA 1 cut(s) 863
SgrBI CCGCGG 1 cut(s) 1232
SinI GGWCC 1 cut(s) 770
SlaI CTCGAG 1 cut(s) 1337
SmlI CTYRAG 4 cut(s) 529, 749, 1337, 1400
SmoI CTYRAG 4 cut(s) 529, 749, 1337, 1400
SpeI ACTAGT 1 cut(s) 1373
SphI GCATGC 1 cut(s) 1441
SseBI AGGCCT 2 cut(s) 969, 1839
SsiI CCGC 6 cut(s) 667, 973, 1229, 1231, 1431, 1648
SspI AATATT 1 cut(s) 272
SspMI CTAG 7 cut(s) 245, 921, 962, 984, 1046, 1374, 1906
StuI AGGCCT 2 cut(s) 969, 1839
StyD4I CCNGG 3 cut(s) 700, 772, 1522
StyI CCWWGG 2 cut(s) 430, 638
TaaI ACNGT 4 cut(s) 720, 1205, 1743, 1766
TaiI ACGT 3 cut(s) 312, 466, 1790
TaqI TCGA 5 cut(s) 152, 863, 879, 1287, 1338
TatI WGTACW 3 cut(s) 958, 1620, 1743
TauI GCSGC 3 cut(s) 670, 1231, 1234
TfiI GAWTC 5 cut(s) 56, 558, 1003, 1011, 1549
TscAI CASTG 3 cut(s) 1110, 1580, 1877
TseFI GTSAC 2 cut(s) 1361, 1661
TseI GCWGC 2 cut(s) 1080, 1626
Tsp45I GTSAC 2 cut(s) 1361, 1661
TspDTI ATGAA 5 cut(s) 36, 282, 707, 1003, 1629
TspGWI ACGGA 1 cut(s) 1669
TspRI CASTG 3 cut(s) 1110, 1580, 1877
Tth111I GACNNNGTC 1 cut(s) 1196
Van91I CCANNNNNTGG 3 cut(s) 940, 1109, 1850
VpaK11BI GGWCC 1 cut(s) 770
XapI RAATTY 5 cut(s) 78, 472, 632, 652, 992
XceI RCATGY 2 cut(s) 383, 1441
XcmI CCANNNNNNNNNTGG 1 cut(s) 1202
XhoI CTCGAG 1 cut(s) 1337
XmnI GAANNNNTTC 1 cut(s) 633
XspI CTAG 7 cut(s) 245, 921, 962, 984, 1046, 1374, 1906
ZrmI AGTACT 1 cut(s) 1622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.