disease resistance
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 591, 828 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1488 |
| AatII | GACGTC | 1 cut(s) | 2549 |
| AccB1I | GGYRCC | 1 cut(s) | 812 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1103 |
| AccI | GTMKAC | 3 cut(s) | 548, 1801, 2362 |
| AccII | CGCG | 3 cut(s) | 897, 1608, 1764 |
| AciI | CCGC | 8 cut(s) | 971, 1404, 1574, 1603, 1606, 1651, 2689, 2751 |
| AclWI | GGATC | 1 cut(s) | 187 |
| AcoI | YGGCCR | 2 cut(s) | 1105, 2963 |
| AcsI | RAATTY | 6 cut(s) | 173, 649, 871, 986, 1019, 2532 |
| AcuI | CTGAAG | 2 cut(s) | 581, 991 |
| AcyI | GRCGYC | 1 cut(s) | 2546 |
| AfaI | GTAC | 9 cut(s) | 395, 940, 954, 1125, 1623, 2182, 2221, 2414, 2498 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 216, 913, 1103, 1742, 1889, 2033, 2197, 2329, 2870 |
| AflIII | ACRYGT | 6 cut(s) | 376, 460, 838, 1126, 2357, 2392 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2424 |
| AhlI | ACTAGT | 1 cut(s) | 2803 |
| AjnI | CCWGG | 2 cut(s) | 442, 1323 |
| Alw21I | GWGCWC | 3 cut(s) | 1354, 1599, 1743 |
| Alw26I | GTCTC | 6 cut(s) | 514, 758, 1754, 2282, 2411, 2523 |
| AlwI | GGATC | 1 cut(s) | 187 |
| AoxI | GGCC | 9 cut(s) | 207, 926, 1105, 1891, 2035, 2504, 2752, 2762, 2963 |
| ApeKI | GCWGC | 4 cut(s) | 1111, 1648, 1854, 2748 |
| ApoI | RAATTY | 6 cut(s) | 173, 649, 871, 986, 1019, 2532 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1853, 1885, 2046, 2078 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2532 |
| AspLEI | GCGC | 3 cut(s) | 1610, 1970, 2114 |
| AspS9I | GGNCC | 8 cut(s) | 208, 926, 1891, 2035, 2426, 2505, 2753, 2763 |
| AsuC2I | CCSGG | 1 cut(s) | 2367 |
| AsuHPI | GGTGA | 8 cut(s) | 338, 432, 695, 1396, 1705, 2392, 2686, 2853 |
| AsuII | TTCGAA | 1 cut(s) | 171 |
| AvaII | GGWCC | 1 cut(s) | 2426 |
| BaeGI | GKGCMC | 3 cut(s) | 2003, 2147, 2248 |
| BalI | TGGCCA | 2 cut(s) | 1107, 2965 |
| BanI | GGYRCC | 1 cut(s) | 812 |
| BbsI | GAAGAC | 1 cut(s) | 2054 |
| Bbv12I | GWGCWC | 3 cut(s) | 1354, 1599, 1743 |
| BbvI | GCAGC | 4 cut(s) | 1098, 1635, 1841, 2760 |
| BceAI | ACGGC | 2 cut(s) | 335, 680 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 379, 413 |
| BciT130I | CCWGG | 2 cut(s) | 444, 1325 |
| BclI | TGATCA | 2 cut(s) | 654, 1186 |
| BcnI | CCSGG | 1 cut(s) | 2367 |
| BcoDI | GTCTC | 6 cut(s) | 514, 758, 1754, 2282, 2411, 2523 |
| BcuI | ACTAGT | 1 cut(s) | 2803 |
| BfaI | CTAG | 9 cut(s) | 248, 536, 1715, 1950, 1958, 2094, 2102, 2285, 2804 |
| BfmI | CTRYAG | 1 cut(s) | 2932 |
| BisI | GCNGC | 7 cut(s) | 1112, 1603, 1606, 1649, 1855, 2749, 2752 |
| BlsI | GCNGC | 7 cut(s) | 1113, 1604, 1607, 1650, 1856, 2750, 2753 |
| BmcAI | AGTACT | 3 cut(s) | 395, 940, 2414 |
| Bme1390I | CCNGG | 3 cut(s) | 444, 1325, 2367 |
| Bme18I | GGWCC | 1 cut(s) | 2426 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2424 |
| BmgT120I | GGNCC | 8 cut(s) | 208, 926, 1891, 2035, 2426, 2505, 2753, 2763 |
| BmiI | GGNNCC | 1 cut(s) | 814 |
| BmrFI | CCNGG | 3 cut(s) | 444, 1325, 2367 |
| BmrI | ACTGGG | 1 cut(s) | 1350 |
| BmsI | GCATC | 9 cut(s) | 336, 942, 1619, 2393, 2627, 2636, 2735, 2827, 2878 |
| BmuI | ACTGGG | 1 cut(s) | 1350 |
| BpiI | GAAGAC | 1 cut(s) | 2054 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1336, 1368 |
| BpmI | CTGGAG | 3 cut(s) | 1346, 1693, 2828 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1644, 1737, 2004, 2148 |
| Bpu14I | TTCGAA | 1 cut(s) | 171 |
| BpuEI | CTTGAG | 6 cut(s) | 547, 1331, 1703, 2273, 2393, 2501 |
| BpuMI | CCSGG | 1 cut(s) | 2367 |
| BsaAI | YACGTR | 3 cut(s) | 461, 1238, 2395 |
| BsaHI | GRCGYC | 1 cut(s) | 2546 |
| BsaI | GGTCTC | 1 cut(s) | 1754 |
| BsaJI | CCNNGG | 3 cut(s) | 211, 1323, 2508 |
| BsaWI | WCCGGW | 1 cut(s) | 61 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 386, 416, 1237, 1267 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 216, 913, 1103, 1742, 1889, 2033, 2197, 2329, 2870 |
| Bse1I | ACTGG | 4 cut(s) | 1356, 1710, 1797, 2875 |
| Bse3DI | GCAATG | 3 cut(s) | 140, 1000, 2385 |
| BseBI | CCWGG | 2 cut(s) | 444, 1325 |
| BseDI | CCNNGG | 3 cut(s) | 211, 1323, 2508 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 216, 913, 1103, 1742, 1889, 2033, 2197, 2329, 2870 |
| BseMI | GCAATG | 3 cut(s) | 140, 1000, 2385 |
| BseNI | ACTGG | 4 cut(s) | 1356, 1710, 1797, 2875 |
| BseRI | GAGGAG | 2 cut(s) | 1328, 1568 |
| BseSI | GKGCMC | 3 cut(s) | 2003, 2147, 2248 |
| BseXI | GCAGC | 4 cut(s) | 1098, 1635, 1841, 2760 |
| BseYI | CCCAGC | 2 cut(s) | 704, 1096 |
| BsgI | GTGCAG | 1 cut(s) | 1807 |
| Bsh1236I | CGCG | 3 cut(s) | 897, 1608, 1764 |
| Bsh1285I | CGRYCG | 1 cut(s) | 971 |
| BshFI | GGCC | 9 cut(s) | 209, 928, 1107, 1893, 2037, 2506, 2754, 2764, 2965 |
| BshNI | GGYRCC | 1 cut(s) | 812 |
| BsiEI | CGRYCG | 1 cut(s) | 971 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1354, 1599, 1743 |
| BsiSI | CCGG | 3 cut(s) | 62, 1496, 2367 |
| BslFI | GGGAC | 3 cut(s) | 1079, 1494, 2712 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 216, 913, 1103, 1742, 1889, 2033, 2197, 2329, 2870 |
| BsmAI | GTCTC | 6 cut(s) | 514, 758, 1754, 2282, 2411, 2523 |
| BsmBI | CGTCTC | 1 cut(s) | 2411 |
| BsmFI | GGGAC | 3 cut(s) | 1079, 1494, 2712 |
| BsmI | GAATGC | 2 cut(s) | 973, 1410 |
| BsnI | GGCC | 9 cut(s) | 209, 928, 1107, 1893, 2037, 2506, 2754, 2764, 2965 |
| Bso31I | GGTCTC | 1 cut(s) | 1754 |
| Bsp119I | TTCGAA | 1 cut(s) | 171 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1354, 1599, 1743, 2003, 2147, 2248 |
| Bsp1407I | TGTACA | 1 cut(s) | 1123 |
| Bsp143I | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| BspACI | CCGC | 8 cut(s) | 971, 1404, 1574, 1603, 1606, 1651, 2689, 2751 |
| BspANI | GGCC | 9 cut(s) | 209, 928, 1107, 1893, 2037, 2506, 2754, 2764, 2965 |
| BspFNI | CGCG | 3 cut(s) | 897, 1608, 1764 |
| BspHI | TCATGA | 1 cut(s) | 361 |
| BspLI | GGNNCC | 1 cut(s) | 814 |
| BspPI | GGATC | 1 cut(s) | 187 |
| BspT104I | TTCGAA | 1 cut(s) | 171 |
| BspT107I | GGYRCC | 1 cut(s) | 812 |
| BspTNI | GGTCTC | 1 cut(s) | 1754 |
| BsrDI | GCAATG | 3 cut(s) | 140, 1000, 2385 |
| BsrGI | TGTACA | 1 cut(s) | 1123 |
| BsrI | ACTGG | 4 cut(s) | 1356, 1710, 1797, 2875 |
| BssECI | CCNNGG | 3 cut(s) | 211, 1323, 2508 |
| BssMI | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| BssNAI | GTATAC | 1 cut(s) | 549 |
| BssNI | GRCGYC | 1 cut(s) | 2546 |
| BssT1I | CCWWGG | 2 cut(s) | 211, 2508 |
| Bst1107I | GTATAC | 1 cut(s) | 549 |
| Bst2UI | CCWGG | 2 cut(s) | 444, 1325 |
| Bst4CI | ACNGT | 5 cut(s) | 691, 1745, 1839, 2058, 2293 |
| Bst6I | CTCTTC | 3 cut(s) | 1620, 1836, 2628 |
| BstACI | GRCGYC | 1 cut(s) | 2546 |
| BstAUI | TGTACA | 1 cut(s) | 1123 |
| BstBAI | YACGTR | 3 cut(s) | 461, 1238, 2395 |
| BstBI | TTCGAA | 1 cut(s) | 171 |
| BstC8I | GCNNGC | 1 cut(s) | 1109 |
| BstFNI | CGCG | 3 cut(s) | 897, 1608, 1764 |
| BstHHI | GCGC | 3 cut(s) | 1610, 1970, 2114 |
| BstKTI | GATC | 9 cut(s) | 195, 355, 367, 558, 657, 737, 1189, 1776, 2233 |
| BstMAI | GTCTC | 6 cut(s) | 514, 758, 1754, 2282, 2411, 2523 |
| BstMBI | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| BstMCI | CGRYCG | 1 cut(s) | 971 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 866, 1083, 1657, 2793 |
| BstNI | CCWGG | 2 cut(s) | 444, 1325 |
| BstNSI | RCATGY | 5 cut(s) | 342, 380, 842, 1130, 2361 |
| BstSCI | CCNGG | 3 cut(s) | 442, 1323, 2365 |
| BstSFI | CTRYAG | 1 cut(s) | 2932 |
| BstSLI | GKGCMC | 3 cut(s) | 2003, 2147, 2248 |
| BstSNI | TACGTA | 1 cut(s) | 1238 |
| BstUI | CGCG | 3 cut(s) | 897, 1608, 1764 |
| BstV1I | GCAGC | 4 cut(s) | 1098, 1635, 1841, 2760 |
| BstV2I | GAAGAC | 1 cut(s) | 2054 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 577 |
| BstZ17I | GTATAC | 1 cut(s) | 549 |
| BsuRI | GGCC | 9 cut(s) | 209, 928, 1107, 1893, 2037, 2506, 2754, 2764, 2965 |
| BtsI | GCAGTG | 3 cut(s) | 1597, 1931, 2075 |
| BtsIMutI | CAGTG | 3 cut(s) | 1597, 1931, 2075 |
| Cac8I | GCNNGC | 1 cut(s) | 1109 |
| CciI | TCATGA | 1 cut(s) | 361 |
| CfoI | GCGC | 3 cut(s) | 1610, 1970, 2114 |
| Cfr13I | GGNCC | 8 cut(s) | 208, 926, 1891, 2035, 2426, 2505, 2753, 2763 |
| Csp6I | GTAC | 9 cut(s) | 394, 939, 953, 1124, 1622, 2181, 2220, 2413, 2497 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 858, 893, 2909, 2944 |
| CviQI | GTAC | 9 cut(s) | 394, 939, 953, 1124, 1622, 2181, 2220, 2413, 2497 |
| DpnI | GATC | 9 cut(s) | 194, 354, 366, 557, 656, 736, 1188, 1775, 2232 |
| DpnII | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| DraI | TTTAAA | 3 cut(s) | 178, 451, 607 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1488 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2424 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1488 |
| EaeI | YGGCCR | 2 cut(s) | 1105, 2963 |
| Eam1104I | CTCTTC | 3 cut(s) | 1620, 1836, 2628 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2424 |
| EarI | CTCTTC | 3 cut(s) | 1620, 1836, 2628 |
| EciI | GGCGGA | 1 cut(s) | 1563 |
| Eco105I | TACGTA | 1 cut(s) | 1238 |
| Eco130I | CCWWGG | 2 cut(s) | 211, 2508 |
| Eco31I | GGTCTC | 1 cut(s) | 1754 |
| Eco32I | GATATC | 1 cut(s) | 2859 |
| Eco47I | GGWCC | 1 cut(s) | 2426 |
| Eco57I | CTGAAG | 2 cut(s) | 581, 991 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1891, 2035 |
| EcoRII | CCWGG | 2 cut(s) | 442, 1323 |
| EcoRV | GATATC | 1 cut(s) | 2859 |
| EcoT14I | CCWWGG | 2 cut(s) | 211, 2508 |
| ErhI | CCWWGG | 2 cut(s) | 211, 2508 |
| Esp3I | CGTCTC | 1 cut(s) | 2411 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 173, 205, 939, 971 |
| FaqI | GGGAC | 3 cut(s) | 1079, 1494, 2712 |
| FbaI | TGATCA | 2 cut(s) | 654, 1186 |
| FblI | GTMKAC | 3 cut(s) | 548, 1801, 2362 |
| Fnu4HI | GCNGC | 7 cut(s) | 1112, 1603, 1606, 1649, 1855, 2749, 2752 |
| Fsp4HI | GCNGC | 7 cut(s) | 1112, 1603, 1606, 1649, 1855, 2749, 2752 |
| FspBI | CTAG | 9 cut(s) | 248, 536, 1715, 1950, 1958, 2094, 2102, 2285, 2804 |
| GlaI | GCGC | 3 cut(s) | 1609, 1969, 2113 |
| GluI | GCNGC | 7 cut(s) | 1112, 1603, 1606, 1649, 1855, 2749, 2752 |
| GsaI | CCCAGC | 2 cut(s) | 708, 1100 |
| GsuI | CTGGAG | 3 cut(s) | 1346, 1693, 2828 |
| HaeIII | GGCC | 9 cut(s) | 209, 928, 1107, 1893, 2037, 2506, 2754, 2764, 2965 |
| HapII | CCGG | 3 cut(s) | 62, 1496, 2367 |
| HhaI | GCGC | 3 cut(s) | 1610, 1970, 2114 |
| Hin1I | GRCGYC | 1 cut(s) | 2546 |
| Hin6I | GCGC | 3 cut(s) | 1608, 1968, 2112 |
| HinP1I | GCGC | 3 cut(s) | 1608, 1968, 2112 |
| HincII | GTYRAC | 4 cut(s) | 1320, 1536, 1560, 2262 |
| HindII | GTYRAC | 4 cut(s) | 1320, 1536, 1560, 2262 |
| HindIII | AAGCTT | 1 cut(s) | 584 |
| HinfI | GANTC | 7 cut(s) | 503, 997, 1092, 1522, 1718, 2447, 2653 |
| HpaI | GTTAAC | 1 cut(s) | 1560 |
| HpaII | CCGG | 3 cut(s) | 62, 1496, 2367 |
| HphI | GGTGA | 8 cut(s) | 338, 432, 695, 1396, 1705, 2392, 2686, 2853 |
| HpyAV | CCTTC | 7 cut(s) | 237, 605, 624, 632, 753, 1082, 2679 |
| HpyCH4III | ACNGT | 5 cut(s) | 691, 1745, 1839, 2058, 2293 |
| HpyCH4IV | ACGT | 8 cut(s) | 460, 1191, 1237, 1868, 2012, 2156, 2394, 2546 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 866, 1083, 1657, 2793 |
| HpySE526I | ACGT | 8 cut(s) | 460, 1191, 1237, 1868, 2012, 2156, 2394, 2546 |
| Hsp92I | GRCGYC | 1 cut(s) | 2546 |
| HspAI | GCGC | 3 cut(s) | 1608, 1968, 2112 |
| Ksp22I | TGATCA | 2 cut(s) | 654, 1186 |
| KspAI | GTTAAC | 1 cut(s) | 1560 |
| Kzo9I | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| LmnI | GCTCC | 4 cut(s) | 1357, 1576, 1712, 1851 |
| Lsp1109I | GCAGC | 4 cut(s) | 1098, 1635, 1841, 2760 |
| LweI | GCATC | 9 cut(s) | 336, 942, 1619, 2393, 2627, 2636, 2735, 2827, 2878 |
| MaeI | CTAG | 9 cut(s) | 248, 536, 1715, 1950, 1958, 2094, 2102, 2285, 2804 |
| MaeII | ACGT | 8 cut(s) | 460, 1191, 1237, 1868, 2012, 2156, 2394, 2546 |
| MaeIII | GTNAC | 2 cut(s) | 266, 2788 |
| MalI | GATC | 9 cut(s) | 194, 354, 366, 557, 656, 736, 1188, 1775, 2232 |
| MboI | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| MfeI | CAATTG | 7 cut(s) | 507, 1340, 1546, 2166, 2195, 2237, 2926 |
| MhlI | GDGCHC | 6 cut(s) | 1354, 1599, 1743, 2003, 2147, 2248 |
| MlsI | TGGCCA | 2 cut(s) | 1107, 2965 |
| MluNI | TGGCCA | 2 cut(s) | 1107, 2965 |
| MlyI | GAGTC | 2 cut(s) | 1101, 1727 |
| MmeI | TCCRAC | 3 cut(s) | 220, 258, 1068 |
| Mox20I | TGGCCA | 2 cut(s) | 1107, 2965 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2532 |
| MscI | TGGCCA | 2 cut(s) | 1107, 2965 |
| Msp20I | TGGCCA | 2 cut(s) | 1107, 2965 |
| MspA1I | CMGCKG | 3 cut(s) | 704, 1111, 2751 |
| MspI | CCGG | 3 cut(s) | 62, 1496, 2367 |
| MspR9I | CCNGG | 3 cut(s) | 444, 1325, 2367 |
| MunI | CAATTG | 7 cut(s) | 507, 1340, 1546, 2166, 2195, 2237, 2926 |
| Mva1269I | GAATGC | 2 cut(s) | 973, 1410 |
| MvaI | CCWGG | 2 cut(s) | 444, 1325 |
| MvnI | CGCG | 3 cut(s) | 897, 1608, 1764 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 866, 1083, 1657, 2793 |
| NciI | CCSGG | 1 cut(s) | 2367 |
| NdeII | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| NlaIV | GGNNCC | 1 cut(s) | 814 |
| NspI | RCATGY | 5 cut(s) | 342, 380, 842, 1130, 2361 |
| NspV | TTCGAA | 1 cut(s) | 171 |
| PagI | TCATGA | 1 cut(s) | 361 |
| PciI | ACATGT | 4 cut(s) | 376, 838, 1126, 2357 |
| PctI | GAATGC | 2 cut(s) | 973, 1410 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2532 |
| PfeI | GAWTC | 5 cut(s) | 503, 997, 1522, 2447, 2653 |
| PflFI | GACNNNGTC | 1 cut(s) | 2058 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1103 |
| PkrI | GCNGC | 7 cut(s) | 1113, 1604, 1607, 1650, 1856, 2750, 2753 |
| PleI | GAGTC | 2 cut(s) | 1100, 1726 |
| PpsI | GAGTC | 2 cut(s) | 1100, 1726 |
| Ppu21I | YACGTR | 3 cut(s) | 461, 1238, 2395 |
| PscI | ACATGT | 4 cut(s) | 376, 838, 1126, 2357 |
| PsiI | TTATAA | 2 cut(s) | 591, 828 |
| Psp6I | CCWGG | 2 cut(s) | 442, 1323 |
| PspFI | CCCAGC | 2 cut(s) | 704, 1096 |
| PspGI | CCWGG | 2 cut(s) | 442, 1323 |
| PspN4I | GGNNCC | 1 cut(s) | 814 |
| PspPI | GGNCC | 8 cut(s) | 208, 926, 1891, 2035, 2426, 2505, 2753, 2763 |
| PsyI | GACNNNGTC | 1 cut(s) | 2058 |
| PvuII | CAGCTG | 2 cut(s) | 704, 1111 |
| RsaI | GTAC | 9 cut(s) | 395, 940, 954, 1125, 1623, 2182, 2221, 2414, 2498 |
| RsaNI | GTAC | 9 cut(s) | 394, 939, 953, 1124, 1622, 2181, 2220, 2413, 2497 |
| SatI | GCNGC | 7 cut(s) | 1112, 1603, 1606, 1649, 1855, 2749, 2752 |
| Sau3AI | GATC | 9 cut(s) | 192, 352, 364, 555, 654, 734, 1186, 1773, 2230 |
| Sau96I | GGNCC | 8 cut(s) | 208, 926, 1891, 2035, 2426, 2505, 2753, 2763 |
| ScaI | AGTACT | 3 cut(s) | 395, 940, 2414 |
| SchI | GAGTC | 2 cut(s) | 1101, 1727 |
| ScrFI | CCNGG | 3 cut(s) | 444, 1325, 2367 |
| SduI | GDGCHC | 6 cut(s) | 1354, 1599, 1743, 2003, 2147, 2248 |
| SfaNI | GCATC | 9 cut(s) | 336, 942, 1619, 2393, 2627, 2636, 2735, 2827, 2878 |
| SfcI | CTRYAG | 1 cut(s) | 2932 |
| SfuI | TTCGAA | 1 cut(s) | 171 |
| SinI | GGWCC | 1 cut(s) | 2426 |
| SmlI | CTYRAG | 6 cut(s) | 526, 1310, 1682, 2252, 2408, 2480 |
| SmoI | CTYRAG | 6 cut(s) | 526, 1310, 1682, 2252, 2408, 2480 |
| SnaBI | TACGTA | 1 cut(s) | 1238 |
| SpeI | ACTAGT | 1 cut(s) | 2803 |
| SsiI | CCGC | 8 cut(s) | 971, 1404, 1574, 1603, 1606, 1651, 2689, 2751 |
| SspI | AATATT | 2 cut(s) | 283, 2911 |
| SspMI | CTAG | 9 cut(s) | 248, 536, 1715, 1950, 1958, 2094, 2102, 2285, 2804 |
| StyD4I | CCNGG | 3 cut(s) | 442, 1323, 2365 |
| StyI | CCWWGG | 2 cut(s) | 211, 2508 |
| TaaI | ACNGT | 5 cut(s) | 691, 1745, 1839, 2058, 2293 |
| TaiI | ACGT | 8 cut(s) | 463, 1194, 1240, 1871, 2015, 2159, 2397, 2549 |
| TaqI | TCGA | 7 cut(s) | 171, 389, 1776, 2053, 2205, 2642, 2721 |
| TaqII | GACCGA | 1 cut(s) | 2570 |
| TatI | WGTACW | 7 cut(s) | 393, 938, 952, 1123, 2180, 2219, 2412 |
| TauI | GCSGC | 3 cut(s) | 1605, 1608, 2754 |
| TfiI | GAWTC | 5 cut(s) | 503, 997, 1522, 2447, 2653 |
| TscAI | CASTG | 3 cut(s) | 1604, 1931, 2075 |
| TseI | GCWGC | 4 cut(s) | 1111, 1648, 1854, 2748 |
| TspGWI | ACGGA | 5 cut(s) | 1864, 2180, 2312, 2418, 2662 |
| TspRI | CASTG | 3 cut(s) | 1604, 1931, 2075 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2058 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1103 |
| VpaK11BI | GGWCC | 1 cut(s) | 2426 |
| XapI | RAATTY | 6 cut(s) | 173, 649, 871, 986, 1019, 2532 |
| XbaI | TCTAGA | 4 cut(s) | 247, 535, 1714, 2284 |
| XceI | RCATGY | 5 cut(s) | 342, 380, 842, 1130, 2361 |
| XmiI | GTMKAC | 3 cut(s) | 548, 1801, 2362 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2532 |
| XspI | CTAG | 9 cut(s) | 248, 536, 1715, 1950, 1958, 2094, 2102, 2285, 2804 |
| ZraI | GACGTC | 1 cut(s) | 2547 |
| ZrmI | AGTACT | 3 cut(s) | 395, 940, 2414 |