MD05G1243400.v1.1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
37600933 .. 37606237
5305 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1243400.v1.1.491

Sequence Viewer

Length: 4227 bp
ATGGCGGTCGAATGTCTGCTTACTTTTGCGGCCAAGGGAATACTGGAGAAGGTGGCTTCGCTTGCTGCTCAAGAAATCAGTCTTGCCTGGGGCTTCAAAGCAGAACTAAAGAAGCTCAGTGAATCCTTATCCGTTCTTCAAGATTTTTTAGGCGACGCTGCCGAGCAAGCGCAAGCTCGGGGCAAGGCAGTGGAAGTTTGGGTGAAGAAACTTAAAGACATAGCCCATGACGCCGATGATGTCTTGGACGAAATCAACTACGAAAATCTCCGGAGTCAAGTGGAACTGCGAAACAATATGAAGAAAAAGGTAAAGAGTTTTCTTTCTTCATCCAACCCCACTTTATTTCGTCGAAAAATGGCTTGCAAAATTAAGAAAGTCAACACTTCTCTGGCGGATCTTAAGAGTGAGGCATCTTTCCTTGGACTAGTTGCAAAAACAATAGATGCACCTGCTCCAGAAATTAGATGGTACAGAGAAACCAACTCACTCGTTGCGGCAGATGAAGTCATAGTCGGAAGGGAGAAGGTTGTGTCAAGTATAATTGCAACCTTGACAAACTCGGACGTCAATCAAGAAAATCTTTCGGTTATGGCCATCGTGGGGATGCCAGGCCTGGGAAAGACAACTTTGGCCAAGTTAGTATACAATGATAATTCTATAAACAGGGTTTTCGCCGAAAAGATGTGGGTGTGTGTATCTAACACTTTTGATGCCAATTCCATTTTAAGTCGGATCTTAGAATTACTTGACCCAACAAAGGTTGGAATACAAAGTCAAGAGGCCTTGCTTAAAAACCTTCAAAGGGAGTTGAAAGATAAAAGATACTTACTTGTTTTCGATGATGTTTGGAATGAAGATCCTCAAAAATGGAAAATGTTGATAAGTTGTTTGTCAATGCTTGATTCTGCTCGAGGAAGCAAAATTATTGTCACCACCCGCAGTGCCAAAGTTGCATCAATAACAGAAACACTTCCACGACATAATATGGGAATTTTGTCAGTGGATGACTGTTGGTCCATATTGAAAGACAAAGCCTTTTCAGATAACAATGCTCCTTTGGCTCAAGATTTAGAGAAAATTGGGAGGCAGATTGCTGAACATTGTGCGGGTCTACCACTGGTAGCAAAGGTTTTGGGAGGTCTGCTGCGATCTAAACACAGTATTGCTGAATGGTTGTCAATTAAAGAAAGTAGAATATGGGACTTGCCAGAAGGAGAAGATAAAATCATTTCAGTCTTGAGGTTGAGTTTTGATAATCTGAAATCGCCTTCTTTGAAACAATGTTTTGCGTATTCCTCAATGTTCATGAAAGACATTGAAATTGAAAGAGATAACTTGATTCAACTTTGGATGGCTCAAGGATTACTTCACCCTTCTTCCGACAAAAGTAATCTAGAAATGGAGGCCATTGGTGATGAATATTTTGATATTCTATTACAGAGCTCCTTGTTTAAAGATGCTACACATGATGCCTATGGCATTGTTACCAAATGCAAGATGCATGATCTAGTACATGATCTTACAGAACTGGTATCCAAATCAGAAATCTTGACACAAGACTTCCATGAAAGAAATGATACAACTGAGATTCGACATGTAGCTCGGGTTTCATCTTCCATACTAGAAAGAATTCCAGGGAGAAATCTTGAGAGGTTGCGATCGGTATTTCCTTATGGCAAAGTCCCTAGTAACATCTTGCCACGGTTTAAAAGCTTACGTTTGTTAAATTTAGCCAAGGCAAAAATTAAGGAGATTCCAGGTTCAATGGGCAAGCTGAAACACTTGAGGTATCTGGACGTTTCCGGAACTAGTCTCAAAGCACTCCCCAAATCTATACACAAACTCTATAACCTACAGACCCTAAGAGCAATGCGATGTTATTCTCTTGAAGAATTTCCGGACGAAGTGAACAATTTGATCAGCTTGAGACATGTTTATTTTGATAAGAGTCTGAAGTTTCCGTTTGGGATGGGGCAATTGACTCACCTCCGGACACTGCCTCACTTTTCTGTGGGAAAGGAAAGGGGTCGTGGAATTGAGGAGTTGGCTAGCTTGAACCAGTTGAAGGGTGAATTAACTCTCTACAATCTAGAACACGTACGTGATAGAGATAAAGCAAGGAAAGCTAAATTGGAGGATAAGAAAAACCTACGCCATTTGAGATTTGTATGGACAGAAGGCATGTCAACAACCAACAACAATGATGAGGATGTACTAGAAGGCCTCCAACCACATTCTGAGTTCGAAAGCCTCGTGATTGAACATTTCAGGGGTGCTAAATTTCCGTCTTGGATGATGAGTAGGTCGTTACCGCTCAATAATTTGAAGAAGATTCATTTGCGCAGGTGCAACAAATGTGAAGGAGTACCAACACTTGGTCATCTACCTAATCTTCAACACCTTCGGATTGATAGAATGGCTGAGCTAAAATGTATCGGAGCTGACTTTTATGGTTACAATCTTGTTTACAATGCAACAAGGTCACGTAAAGAGACGACAACTTTGTTTCCAGCACTGAAACAATTATCCATTAGTGAGTGCAGGGAGCTTATTGAATGGATGGAAGCACCAAAATTGTCAACAGAAGTGTTTCCTTGCCTTGAGGAGCTGCATATCTTGAATTGTCCCAAATTGAGAAATGCTCCCAGTCATTTTCCATTGCTCAAGGACTTGTGGATATCTTCTTGTGACAATGTCCAGCCATTAAAAAATATAACCAGCAGACTAACAAGTCTGACTTCCCTCACGATTGATCTTAATAAGAAAATTACCAGTCTGCCAAAAGGGATGTTGGAGAGCAACAAAAATCTCACATCTGTTGAGATATTAAGTTGTGAGAAGTTGGCTTGTATTGCTCCCAATGTACTTGGATGTTGCACATCCCTCCAGAAGCTACATGTCTATGATTGTAAAAGGCTGAGGCGTTTACCTGATGGGATAGACACACTGCCTTTGCTTGAGAAGATGACAAGAAGAGAATGCCCTCGCCTAGAGTTCATCCCAATGACACACGGCATGGCTTCTCTCCGCAAACTGCATATTGATTCTTGCGGTGGACTGTCAGGCCTACCAAGTGGGCTAGAATACTGTACATCTCTTCAAGCATTGAACATAATGGGTTGCGGTAATCTAACAGTCATTCCAGTCACACACGACCTTTCTTCTCTCCGCACATTGAAGATTGGAGATTGTGAAGGATTATCATGCCTACCAAGCGGACTTGAGCATTTCTCCTCTCTACAAGAATTGTCTGTGTGGAATTGTCCAATTGTAACATCAATTCCAATTTCCAACGGCGTGCCCTTCACCTCCTTGCAGGTATTGGAAATTGAAAATTGTATGGAATTATCAAGCTTCCCAGCCCTAGAATATTGTCCTTCTCTTCGGAAATTGATGATAAGGAACTGCCCAAAGCTAGCATTCATAAGTGCCTTATCACTTACGAATCCACTACCAAATAGCAGATCAGAAAACTTCACTAGTACGAGCCTTGACAGTCTTGAGTATTTGTCTATAAGGAGTTGTAGTAATCTGCATTCAATTCCAGATTTAGACACCTTCACTTCTCTCCGTCAACTGTGGATTCATAACTGTGAAAGATTAGAGATTCGGGCTACTTCACTATGTGTCTCTCTTGAGGAGTTGAAATTAACCAGTTTGCCAAAGCCAGAGAGTATACCAAGTTTAGACAACCTCACATCTCTCTGTATGGTAGCCATTTATGATTGTGGGAATTTGAAAATTTTCCCAAGGGGGCTTCACTGCCTCACTCGTTTGAAGACTTTGACAATTGGTGGGTTCTCGGAGGAGCTTGATTGCTTCCCTGATTTTCCAATTCTTTCGCGACTTAAAAGATTAACTTTGCGTGGGTGGCCTAAGCTCAAGTCTCTGCCTCAACAAATTCAACACTTCACTTCTTTGACGCATTTGTGTATAATGTCTTTTGATGGAGTGGAGGCCCTGCCAGACTGGTTGGGTAACCTTACATATCTGTGGCAGCTGGAGATTGTGAACTGCAAGAATTTGATGTATTTACCTACCGTCAAAGCTATGCAACGCCTTACCAACTTACTAAATCTGGAAATTCGTTGTTGCCCCTTTCTTGGAGAAAGGTGCACTGCAGAGACAGGCTCGGAATGGCATAAGGTTTCTCACATTCTTACTTTCAAAGTCGTGGATTCTGAGTCGTGCAGAGTGTTGAAGCTATGCGACGCCTCAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1409

Amino Acids

158.85

Weight (kDa)

8.44

Isoelectric Point (pI)

49.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 99 1.3e-21 Rx N-terminal domain
NB-ARC PF00931 175 - 350 1.2e-36 NB-ARC domain
AAA_22 PF13401 196 - 294 8.3e-07 AAA domain
WHD_DRP PF23559 435 - 508 1.8e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 553 - 846 9.1e-32 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 680 - 807 7.9e-38 R13L1/DRL21 LRRs
LRR_14 PF23598 943 - 1132 1.1e-07 Leucine-rich repeat region
LRR_14 PF23598 1225 - 1391 3.2e-09 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 1302 - 1358 6.3e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 460, 2337
AasI GACNNNNNNGTC 1 cut(s) 2733
AatII GACGTC 1 cut(s) 570
Acc16I TGCGCA 1 cut(s) 2345
Acc36I ACCTGC 3 cut(s) 460, 2337, 3310
AccB7I CCANNNNNTGG 1 cut(s) 2378
AccBSI CCGCTC 1 cut(s) 2317
AccI GTMKAC 3 cut(s) 645, 1114, 3679
AccII CGCG 1 cut(s) 3847
AccIII TCCGGA 4 cut(s) 270, 1805, 1900, 1992
AclWI GGATC 3 cut(s) 405, 743, 854
AcoI YGGCCR 3 cut(s) 30, 594, 633
AcuI CTGAAG 1 cut(s) 1976
AcyI GRCGYC 3 cut(s) 231, 567, 4215
AdeI CACNNNGTG 1 cut(s) 3629
AfaI GTAC 8 cut(s) 473, 1515, 2103, 2217, 2370, 2868, 3094, 3487
AfiI CCNNNNNNNGG 7 cut(s) 603, 617, 760, 805, 2068, 2378, 4106
AflII CTTAAG 1 cut(s) 401
AflIII ACRYGT 4 cut(s) 1597, 1933, 2098, 2899
AhdI GACNNNNNGTC 1 cut(s) 1015
AhlI ACTAGT 3 cut(s) 427, 1811, 3482
AjnI CCWGG 5 cut(s) 86, 610, 615, 1636, 1759
AjuI GAANNNNNNNTTGG 2 cut(s) 2117, 2149
AleI CACNNNNGTG 1 cut(s) 2103
Alw21I GWGCWC 2 cut(s) 1448, 4121
Alw26I GTCTC 6 cut(s) 1820, 1924, 2489, 3637, 3894, 4121
Alw44I GTGCAC 1 cut(s) 4117
AlwI GGATC 3 cut(s) 405, 743, 854
Ama87I CYCGRG 3 cut(s) 177, 912, 1605
Aor13HI TCCGGA 4 cut(s) 270, 1805, 1900, 1992
ApaLI GTGCAC 1 cut(s) 4117
ApeKI GCWGC 5 cut(s) 65, 158, 1147, 2611, 4000
ArsI GACNNNNNNTTYG 4 cut(s) 915, 947, 2488, 2520
Asp700I GAANNNNTTC 5 cut(s) 972, 1632, 1896, 2592, 3746
AspLEI GCGC 2 cut(s) 172, 2346
AspS9I GGNCC 2 cut(s) 1017, 3961
AsuHPI GGTGA 7 cut(s) 214, 925, 1364, 1427, 1979, 2084, 3301
AsuII TTCGAA 1 cut(s) 2247
AsuNHI GCTAGC 2 cut(s) 2051, 3418
AvaI CYCGRG 3 cut(s) 177, 912, 1605
AvaII GGWCC 1 cut(s) 1017
BaeGI GKGCMC 2 cut(s) 3306, 4121
BalI TGGCCA 2 cut(s) 596, 635
BanII GRGCYC 1 cut(s) 1448
BauI CACGAG 1 cut(s) 2255
BbsI GAAGAC 1 cut(s) 3788
Bbv12I GWGCWC 2 cut(s) 1448, 4121
BbvCI CCTCAGC 1 cut(s) 2921
BbvI GCAGC 5 cut(s) 52, 145, 1134, 2598, 4012
BccI CCATC 7 cut(s) 462, 605, 1348, 1966, 2557, 2930, 3944
BceAI ACGGC 2 cut(s) 3031, 3313
BciT130I CCWGG 5 cut(s) 88, 612, 617, 1638, 1761
BciVI GTATCC 1 cut(s) 1546
BclI TGATCA 1 cut(s) 1920
BcoDI GTCTC 6 cut(s) 1820, 1924, 2489, 3637, 3894, 4121
BcuI ACTAGT 3 cut(s) 427, 1811, 3482
BfmI CTRYAG 2 cut(s) 1856, 4122
BfrI CTTAAG 1 cut(s) 401
BfuAI ACCTGC 3 cut(s) 460, 2337, 3310
BfuI GTATCC 1 cut(s) 1546
BisI GCNGC 7 cut(s) 30, 66, 159, 498, 1148, 2612, 4001
BlpI GCTNAGC 1 cut(s) 2424
BlsI GCNGC 7 cut(s) 31, 67, 160, 499, 1149, 2613, 4002
Bme1390I CCNGG 5 cut(s) 88, 612, 617, 1638, 1761
Bme18I GGWCC 1 cut(s) 1017
BmeRI GACNNNNNGTC 1 cut(s) 1015
BmeT110I CYCGRG 3 cut(s) 177, 912, 1605
BmgT120I GGNCC 2 cut(s) 1017, 3961
BmrFI CCNGG 5 cut(s) 88, 612, 617, 1638, 1761
BmrI ACTGGG 1 cut(s) 2643
BmsI GCATC 8 cut(s) 422, 436, 597, 703, 965, 1450, 1462, 1491
BmtI GCTAGC 2 cut(s) 2055, 3422
BmuI ACTGGG 1 cut(s) 2643
BpiI GAAGAC 1 cut(s) 3788
BplI GAGNNNNNCTC 6 cut(s) 2629, 2661, 3218, 3250, 4118, 4150
BpmI CTGGAG 4 cut(s) 65, 441, 2873, 4025
Bpu10I CCTNAGC 2 cut(s) 2921, 3879
Bpu1102I GCTNAGC 1 cut(s) 2424
Bpu14I TTCGAA 1 cut(s) 2247
BsaAI YACGTR 3 cut(s) 2101, 2105, 2489
BsaHI GRCGYC 3 cut(s) 231, 567, 4215
BsaJI CCNNGG 8 cut(s) 33, 87, 421, 616, 1637, 1703, 1737, 3752
BsaWI WCCGGW 4 cut(s) 270, 1805, 1900, 1992
BsaXI ACNNNNNCTCC 2 cut(s) 3514, 3544
Bsc4I CCNNNNNNNGG 7 cut(s) 603, 617, 760, 805, 2068, 2378, 4106
Bse1I ACTGG 9 cut(s) 48, 1125, 1536, 2062, 2649, 2775, 3146, 3657, 3977
Bse3DI GCAATG 2 cut(s) 1878, 2660
BseAI TCCGGA 4 cut(s) 270, 1805, 1900, 1992
BseBI CCWGG 5 cut(s) 88, 612, 617, 1638, 1761
BseDI CCNNGG 8 cut(s) 33, 87, 421, 616, 1637, 1703, 1737, 3752
BseLI CCNNNNNNNGG 7 cut(s) 603, 617, 760, 805, 2068, 2378, 4106
BseMI GCAATG 2 cut(s) 1878, 2660
BseMII CTCAG 6 cut(s) 130, 1578, 2232, 2415, 2912, 4176
BseNI ACTGG 9 cut(s) 48, 1125, 1536, 2062, 2649, 2775, 3146, 3657, 3977
BseRI GAGGAG 5 cut(s) 2057, 2621, 3226, 3656, 3824
BseSI GKGCMC 2 cut(s) 3306, 4121
BseXI GCAGC 5 cut(s) 52, 145, 1134, 2598, 4012
BseYI CCCAGC 1 cut(s) 3361
BsgI GTGCAG 2 cut(s) 2563, 4213
Bsh1236I CGCG 1 cut(s) 3847
Bsh1285I CGRYCG 2 cut(s) 9, 1664
BsiEI CGRYCG 2 cut(s) 9, 1664
BsiHKAI GWGCWC 2 cut(s) 1448, 4121
BsiHKCI CYCGRG 3 cut(s) 177, 912, 1605
BsiSI CCGG 4 cut(s) 271, 1806, 1901, 1993
BsiWI CGTACG 1 cut(s) 2101
BslFI GGGAC 3 cut(s) 1217, 1670, 2613
BslI CCNNNNNNNGG 7 cut(s) 603, 617, 760, 805, 2068, 2378, 4106
BsmAI GTCTC 6 cut(s) 1820, 1924, 2489, 3637, 3894, 4121
BsmBI CGTCTC 1 cut(s) 2489
BsmFI GGGAC 3 cut(s) 1217, 1670, 2613
BsmI GAATGC 3 cut(s) 2987, 3422, 3538
BsoBI CYCGRG 3 cut(s) 177, 912, 1605
Bsp119I TTCGAA 1 cut(s) 2247
Bsp1286I GDGCHC 3 cut(s) 1448, 3306, 4121
Bsp13I TCCGGA 4 cut(s) 270, 1805, 1900, 1992
Bsp1407I TGTACA 1 cut(s) 3092
Bsp1720I GCTNAGC 1 cut(s) 2424
Bsp68I TCGCGA 1 cut(s) 3847
BspCNI CTCAG 6 cut(s) 129, 1579, 2233, 2416, 2913, 4177
BspEI TCCGGA 4 cut(s) 270, 1805, 1900, 1992
BspFNI CGCG 1 cut(s) 3847
BspHI TCATGA 1 cut(s) 1308
BspMAI CTGCAG 1 cut(s) 4126
BspMI ACCTGC 3 cut(s) 460, 2337, 3310
BspOI GCTAGC 2 cut(s) 2055, 3422
BspPI GGATC 3 cut(s) 405, 743, 854
BspT104I TTCGAA 1 cut(s) 2247
BspTI CTTAAG 1 cut(s) 401
BsrBI CCGCTC 1 cut(s) 2317
BsrDI GCAATG 2 cut(s) 1878, 2660
BsrGI TGTACA 1 cut(s) 3092
BsrI ACTGG 9 cut(s) 48, 1125, 1536, 2062, 2649, 2775, 3146, 3657, 3977
BssECI CCNNGG 8 cut(s) 33, 87, 421, 616, 1637, 1703, 1737, 3752
BssNAI GTATAC 2 cut(s) 646, 3680
BssNI GRCGYC 3 cut(s) 231, 567, 4215
BssSI CACGAG 1 cut(s) 2255
BssT1I CCWWGG 4 cut(s) 33, 421, 1737, 3752
Bst1107I GTATAC 2 cut(s) 646, 3680
Bst2BI CACGAG 1 cut(s) 2255
Bst2UI CCWGG 5 cut(s) 88, 612, 617, 1638, 1761
Bst6I CTCTTC 3 cut(s) 2971, 3105, 3390
BstACI GRCGYC 3 cut(s) 231, 567, 4215
BstAFI CTTAAG 1 cut(s) 401
BstAUI TGTACA 1 cut(s) 3092
BstBAI YACGTR 3 cut(s) 2101, 2105, 2489
BstBI TTCGAA 1 cut(s) 2247
BstC8I GCNNGC 8 cut(s) 63, 168, 174, 364, 1775, 2053, 3302, 3420
BstDEI CTNAG 9 cut(s) 116, 739, 1587, 1865, 2241, 2424, 2921, 3879, 4185
BstDSI CCRYGG 1 cut(s) 1703
BstEII GGTNACC 1 cut(s) 3980
BstFNI CGCG 1 cut(s) 3847
BstHHI GCGC 2 cut(s) 172, 2346
BstMAI GTCTC 6 cut(s) 1820, 1924, 2489, 3637, 3894, 4121
BstMCI CGRYCG 2 cut(s) 9, 1664
BstMWI GCNNNNNNNGC 9 cut(s) 62, 167, 230, 953, 1061, 2126, 2855, 3216, 3874
BstNI CCWGG 5 cut(s) 88, 612, 617, 1638, 1761
BstNSI RCATGY 4 cut(s) 1601, 1937, 2188, 2903
BstPI GGTNACC 1 cut(s) 3980
BstSCI CCNGG 5 cut(s) 86, 610, 615, 1636, 1759
BstSFI CTRYAG 2 cut(s) 1856, 4122
BstSLI GKGCMC 2 cut(s) 3306, 4121
BstUI CGCG 1 cut(s) 3847
BstV1I GCAGC 5 cut(s) 52, 145, 1134, 2598, 4012
BstV2I GAAGAC 1 cut(s) 3788
BstX2I RGATCY 3 cut(s) 397, 735, 859
BstYI RGATCY 3 cut(s) 397, 735, 859
BstZ17I GTATAC 2 cut(s) 646, 3680
BsuI GTATCC 1 cut(s) 1546
BtgI CCRYGG 1 cut(s) 1703
BtgZI GCGATG 1 cut(s) 1891
BtsI GCAGTG 6 cut(s) 195, 949, 1997, 2948, 3763, 4119
BtuMI TCGCGA 1 cut(s) 3847
BveI ACCTGC 3 cut(s) 460, 2337, 3310
Cac8I GCNNGC 8 cut(s) 63, 168, 174, 364, 1775, 2053, 3302, 3420
CciI TCATGA 1 cut(s) 1308
CfoI GCGC 2 cut(s) 172, 2346
Cfr13I GGNCC 2 cut(s) 1017, 3961
CseI GACGC 3 cut(s) 164, 239, 3934
Csp6I GTAC 8 cut(s) 472, 1514, 2102, 2216, 2369, 2867, 3093, 3486
CviQI GTAC 8 cut(s) 472, 1514, 2102, 2216, 2369, 2867, 3093, 3486
DdeI CTNAG 9 cut(s) 116, 739, 1587, 1865, 2241, 2424, 2921, 3879, 4185
DraI TTTAAA 2 cut(s) 1456, 1711
DraIII CACNNNGTG 1 cut(s) 3629
DrdI GACNNNNNNGTC 1 cut(s) 2733
DriI GACNNNNNGTC 1 cut(s) 1015
DseDI GACNNNNNNGTC 1 cut(s) 2733
EaeI YGGCCR 3 cut(s) 30, 594, 633
Eam1104I CTCTTC 3 cut(s) 2971, 3105, 3390
Eam1105I GACNNNNNGTC 1 cut(s) 1015
EarI CTCTTC 3 cut(s) 2971, 3105, 3390
EciI GGCGGA 1 cut(s) 410
Ecl136II GAGCTC 1 cut(s) 1446
Eco130I CCWWGG 4 cut(s) 33, 421, 1737, 3752
Eco147I AGGCCT 4 cut(s) 615, 785, 2226, 3069
Eco24I GRGCYC 1 cut(s) 1448
Eco32I GATATC 1 cut(s) 2682
Eco47I GGWCC 1 cut(s) 1017
Eco53kI GAGCTC 1 cut(s) 1446
Eco57I CTGAAG 1 cut(s) 1976
Eco88I CYCGRG 3 cut(s) 177, 912, 1605
Eco91I GGTNACC 1 cut(s) 3980
EcoICRI GAGCTC 1 cut(s) 1446
EcoO109I RGGNCCY 1 cut(s) 3961
EcoO65I GGTNACC 1 cut(s) 3980
EcoRI GAATTC 1 cut(s) 1632
EcoRII CCWGG 5 cut(s) 86, 610, 615, 1636, 1759
EcoRV GATATC 1 cut(s) 2682
EcoT14I CCWWGG 4 cut(s) 33, 421, 1737, 3752
EcoT22I ATGCAT 1 cut(s) 1506
EcoT38I GRGCYC 1 cut(s) 1448
ErhI CCWWGG 4 cut(s) 33, 421, 1737, 3752
Esp3I CGTCTC 1 cut(s) 2489
FalI AAGNNNNNCTT 8 cut(s) 567, 599, 1353, 1385, 2725, 2757, 3847, 3879
FaqI GGGAC 3 cut(s) 1217, 1670, 2613
FauI CCCGC 2 cut(s) 947, 1102
FbaI TGATCA 1 cut(s) 1920
FblI GTMKAC 3 cut(s) 645, 1114, 3679
Fnu4HI GCNGC 7 cut(s) 30, 66, 159, 498, 1148, 2612, 4001
FriOI GRGCYC 1 cut(s) 1448
Fsp4HI GCNGC 7 cut(s) 30, 66, 159, 498, 1148, 2612, 4001
FspI TGCGCA 1 cut(s) 2345
GlaI GCGC 2 cut(s) 171, 2345
GluI GCNGC 7 cut(s) 30, 66, 159, 498, 1148, 2612, 4001
GsaI CCCAGC 1 cut(s) 3365
GsuI CTGGAG 4 cut(s) 65, 441, 2873, 4025
HapII CCGG 4 cut(s) 271, 1806, 1901, 1993
HgaI GACGC 3 cut(s) 164, 239, 3934
HhaI GCGC 2 cut(s) 172, 2346
Hin1I GRCGYC 3 cut(s) 231, 567, 4215
Hin6I GCGC 2 cut(s) 170, 2344
HinP1I GCGC 2 cut(s) 170, 2344
HincII GTYRAC 4 cut(s) 382, 2190, 2583, 3578
HindII GTYRAC 4 cut(s) 382, 2190, 2583, 3578
HindIII AAGCTT 2 cut(s) 1714, 3355
HpaII CCGG 4 cut(s) 271, 1806, 1901, 1993
HphI GGTGA 7 cut(s) 214, 925, 1364, 1427, 1979, 2084, 3301
Hpy99I CGWCG 3 cut(s) 158, 354, 4217
HpyCH4IV ACGT 6 cut(s) 567, 1720, 1800, 2100, 2104, 2488
HpyF10VI GCNNNNNNNGC 9 cut(s) 62, 167, 230, 953, 1061, 2126, 2855, 3216, 3874
HpyF3I CTNAG 9 cut(s) 116, 739, 1587, 1865, 2241, 2424, 2921, 3879, 4185
HpySE526I ACGT 6 cut(s) 567, 1720, 1800, 2100, 2104, 2488
Hsp92I GRCGYC 3 cut(s) 231, 567, 4215
HspAI GCGC 2 cut(s) 170, 2344
Kpn2I TCCGGA 4 cut(s) 270, 1805, 1900, 1992
Ksp22I TGATCA 1 cut(s) 1920
LmnI GCTCC 9 cut(s) 460, 1060, 1451, 2441, 2548, 2608, 2650, 2863, 3811
Lsp1109I GCAGC 5 cut(s) 52, 145, 1134, 2598, 4012
LweI GCATC 8 cut(s) 422, 436, 597, 703, 965, 1450, 1462, 1491
MaeII ACGT 6 cut(s) 567, 1720, 1800, 2100, 2104, 2488
MbiI CCGCTC 1 cut(s) 2317
MfeI CAATTG 3 cut(s) 1979, 3270, 3792
MflI RGATCY 3 cut(s) 397, 735, 859
MhlI GDGCHC 3 cut(s) 1448, 3306, 4121
MlsI TGGCCA 2 cut(s) 596, 635
MluNI TGGCCA 2 cut(s) 596, 635
MlyI GAGTC 4 cut(s) 283, 1960, 1978, 4196
MmeI TCCRAC 8 cut(s) 357, 496, 713, 745, 1407, 2254, 2775, 3318
Mox20I TGGCCA 2 cut(s) 596, 635
Mph1103I ATGCAT 1 cut(s) 1506
MroI TCCGGA 4 cut(s) 270, 1805, 1900, 1992
MroXI GAANNNNTTC 5 cut(s) 972, 1632, 1896, 2592, 3746
MscI TGGCCA 2 cut(s) 596, 635
MslI CAYNNNNRTG 5 cut(s) 2103, 2904, 3005, 3594, 3994
Msp20I TGGCCA 2 cut(s) 596, 635
MspA1I CMGCKG 1 cut(s) 4003
MspCI CTTAAG 1 cut(s) 401
MspI CCGG 4 cut(s) 271, 1806, 1901, 1993
MspR9I CCNGG 5 cut(s) 88, 612, 617, 1638, 1761
MunI CAATTG 3 cut(s) 1979, 3270, 3792
Mva1269I GAATGC 3 cut(s) 2987, 3422, 3538
MvaI CCWGG 5 cut(s) 88, 612, 617, 1638, 1761
MvnI CGCG 1 cut(s) 3847
MwoI GCNNNNNNNGC 9 cut(s) 62, 167, 230, 953, 1061, 2126, 2855, 3216, 3874
NheI GCTAGC 2 cut(s) 2051, 3418
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 4 cut(s) 931, 2484, 2690, 3148
NruI TCGCGA 1 cut(s) 3847
NsbI TGCGCA 1 cut(s) 2345
NsiI ATGCAT 1 cut(s) 1506
NspI RCATGY 4 cut(s) 1601, 1937, 2188, 2903
NspV TTCGAA 1 cut(s) 2247
OliI CACNNNNGTG 1 cut(s) 2103
PaeR7I CTCGAG 1 cut(s) 912
PagI TCATGA 1 cut(s) 1308
PaqCI CACCTGC 2 cut(s) 460, 2337
PceI AGGCCT 4 cut(s) 615, 785, 2226, 3069
PciI ACATGT 3 cut(s) 1597, 1933, 2899
PcsI WCGNNNNNNNCGW 1 cut(s) 2253
PctI GAATGC 3 cut(s) 2987, 3422, 3538
PdmI GAANNNNTTC 5 cut(s) 972, 1632, 1896, 2592, 3746
Pfl23II CGTACG 1 cut(s) 2101
PflFI GACNNNGTC 1 cut(s) 2696
PflMI CCANNNNNTGG 1 cut(s) 2378
PkrI GCNGC 7 cut(s) 31, 67, 160, 499, 1149, 2613, 4002
Ple19I CGATCG 1 cut(s) 1664
PleI GAGTC 4 cut(s) 282, 1959, 1978, 4195
PpsI GAGTC 4 cut(s) 282, 1959, 1978, 4195
Ppu21I YACGTR 3 cut(s) 2101, 2105, 2489
PscI ACATGT 3 cut(s) 1597, 1933, 2899
Psp124BI GAGCTC 1 cut(s) 1448
Psp6I CCWGG 5 cut(s) 86, 610, 615, 1636, 1759
PspEI GGTNACC 1 cut(s) 3980
PspFI CCCAGC 1 cut(s) 3361
PspGI CCWGG 5 cut(s) 86, 610, 615, 1636, 1759
PspLI CGTACG 1 cut(s) 2101
PspPI GGNCC 2 cut(s) 1017, 3961
PspXI VCTCGAGB 1 cut(s) 912
PstI CTGCAG 1 cut(s) 4126
PsuI RGATCY 3 cut(s) 397, 735, 859
PsyI GACNNNGTC 1 cut(s) 2696
PvuI CGATCG 1 cut(s) 1664
PvuII CAGCTG 1 cut(s) 4003
RruI TCGCGA 1 cut(s) 3847
RsaI GTAC 8 cut(s) 473, 1515, 2103, 2217, 2370, 2868, 3094, 3487
RsaNI GTAC 8 cut(s) 472, 1514, 2102, 2216, 2369, 2867, 3093, 3486
RseI CAYNNNNRTG 5 cut(s) 2103, 2904, 3005, 3594, 3994
SacI GAGCTC 1 cut(s) 1448
SatI GCNGC 7 cut(s) 30, 66, 159, 498, 1148, 2612, 4001
Sau96I GGNCC 2 cut(s) 1017, 3961
SchI GAGTC 4 cut(s) 283, 1960, 1978, 4196
ScrFI CCNGG 5 cut(s) 88, 612, 617, 1638, 1761
SduI GDGCHC 3 cut(s) 1448, 3306, 4121
SfaNI GCATC 8 cut(s) 422, 436, 597, 703, 965, 1450, 1462, 1491
SfcI CTRYAG 2 cut(s) 1856, 4122
Sfr274I CTCGAG 1 cut(s) 912
SfuI TTCGAA 1 cut(s) 2247
SinI GGWCC 1 cut(s) 1017
SlaI CTCGAG 1 cut(s) 912
SmiMI CAYNNNNRTG 5 cut(s) 2103, 2904, 3005, 3594, 3994
SpeI ACTAGT 3 cut(s) 427, 1811, 3482
SseBI AGGCCT 4 cut(s) 615, 785, 2226, 3069
SspI AATATT 2 cut(s) 1424, 3374
SstI GAGCTC 1 cut(s) 1448
StuI AGGCCT 4 cut(s) 615, 785, 2226, 3069
StyD4I CCNGG 5 cut(s) 86, 610, 615, 1636, 1759
StyI CCWWGG 4 cut(s) 33, 421, 1737, 3752
TaiI ACGT 6 cut(s) 570, 1723, 1803, 2103, 2107, 2491
TaqI TCGA 6 cut(s) 9, 352, 840, 913, 1594, 2247
TatI WGTACW 4 cut(s) 1513, 2215, 2866, 3092
TauI GCSGC 2 cut(s) 32, 500
TseFI GTSAC 4 cut(s) 931, 2484, 2690, 3148
TseI GCWGC 5 cut(s) 65, 158, 1147, 2611, 4000
Tsp45I GTSAC 4 cut(s) 931, 2484, 2690, 3148
TspGWI ACGGA 4 cut(s) 121, 1953, 2277, 3563
Tth111I GACNNNGTC 1 cut(s) 2696
Van91I CCANNNNNTGG 1 cut(s) 2378
Vha464I CTTAAG 1 cut(s) 401
VneI GTGCAC 1 cut(s) 4117
VpaK11BI GGWCC 1 cut(s) 1017
XbaI TCTAGA 2 cut(s) 1396, 2092
XceI RCATGY 4 cut(s) 1601, 1937, 2188, 2903
XcmI CCANNNNNNNNNTGG 2 cut(s) 40, 465
XhoI CTCGAG 1 cut(s) 912
XmiI GTMKAC 3 cut(s) 645, 1114, 3679
XmnI GAANNNNTTC 5 cut(s) 972, 1632, 1896, 2592, 3746
ZraI GACGTC 1 cut(s) 568
Zsp2I ATGCAT 1 cut(s) 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.