disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 83 - 238 | 2.2e-31 | NB-ARC domain |
| NACHT | PF05729 | 88 - 218 | 3.4e-06 | NACHT domain |
| WHD_DRP | PF23559 | 297 - 368 | 5.7e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 429 - 605 | 1.4e-09 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 458 - 584 | 2.8e-26 | R13L1/DRL21 LRRs |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 480 |
| AclWI | GGATC | 2 cut(s) | 416, 922 |
| AcoI | YGGCCR | 2 cut(s) | 1383, 1520 |
| AcsI | RAATTY | 4 cut(s) | 66, 1052, 1292, 1465 |
| AcuI | CTGAAG | 1 cut(s) | 1731 |
| AfaI | GTAC | 5 cut(s) | 116, 789, 1113, 1262, 1517 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 81, 385 |
| AflIII | ACRYGT | 2 cut(s) | 1108, 1263 |
| AjnI | CCWGG | 3 cut(s) | 27, 1366, 1551 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 287, 319 |
| AluBI | AGCT | 9 cut(s) | 284, 626, 710, 751, 1233, 1389, 1500, 1709, 1744 |
| AluI | AGCT | 9 cut(s) | 284, 626, 710, 751, 1233, 1389, 1500, 1709, 1744 |
| Alw21I | GWGCWC | 1 cut(s) | 730 |
| Alw26I | GTCTC | 2 cut(s) | 635, 1628 |
| AlwI | GGATC | 2 cut(s) | 416, 922 |
| Ama87I | CYCGRG | 1 cut(s) | 585 |
| AoxI | GGCC | 3 cut(s) | 1383, 1520, 1558 |
| ApeKI | GCWGC | 2 cut(s) | 23, 626 |
| ApoI | RAATTY | 4 cut(s) | 66, 1052, 1292, 1465 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1313, 1345, 1348, 1380 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 871, 902 |
| AspS9I | GGNCC | 2 cut(s) | 1310, 1558 |
| AsuHPI | GGTGA | 4 cut(s) | 400, 950, 1057, 1622 |
| AsuII | TTCGAA | 1 cut(s) | 1489 |
| AvaI | CYCGRG | 1 cut(s) | 585 |
| AvaII | GGWCC | 1 cut(s) | 1310 |
| BalI | TGGCCA | 2 cut(s) | 1385, 1522 |
| BbsI | GAAGAC | 1 cut(s) | 302 |
| Bbv12I | GWGCWC | 1 cut(s) | 730 |
| BbvI | GCAGC | 2 cut(s) | 10, 613 |
| BccI | CCATC | 7 cut(s) | 259, 934, 973, 1436, 1630, 1696, 1801 |
| BciT130I | CCWGG | 3 cut(s) | 29, 1368, 1553 |
| BciVI | GTATCC | 1 cut(s) | 979 |
| BcoDI | GTCTC | 2 cut(s) | 635, 1628 |
| BfaI | CTAG | 2 cut(s) | 245, 512 |
| BfmI | CTRYAG | 1 cut(s) | 1799 |
| BfuAI | ACCTGC | 1 cut(s) | 480 |
| BfuI | GTATCC | 1 cut(s) | 979 |
| BisI | GCNGC | 2 cut(s) | 24, 627 |
| BlsI | GCNGC | 2 cut(s) | 25, 628 |
| BmcAI | AGTACT | 1 cut(s) | 1517 |
| Bme1390I | CCNGG | 3 cut(s) | 29, 1368, 1553 |
| Bme18I | GGWCC | 1 cut(s) | 1310 |
| BmeT110I | CYCGRG | 1 cut(s) | 585 |
| BmgT120I | GGNCC | 2 cut(s) | 1310, 1558 |
| BmrFI | CCNGG | 3 cut(s) | 29, 1368, 1553 |
| BmrI | ACTGGG | 1 cut(s) | 1776 |
| BmsI | GCATC | 3 cut(s) | 1068, 1148, 1261 |
| BmuI | ACTGGG | 1 cut(s) | 1776 |
| BpiI | GAAGAC | 1 cut(s) | 302 |
| BpmI | CTGGAG | 2 cut(s) | 1310, 1574 |
| Bpu10I | CCTNAGC | 1 cut(s) | 945 |
| Bpu14I | TTCGAA | 1 cut(s) | 1489 |
| BpuEI | CTTGAG | 1 cut(s) | 1757 |
| BsaJI | CCNNGG | 5 cut(s) | 27, 28, 586, 1044, 1069 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1762, 1792 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 81, 385 |
| Bse1I | ACTGG | 7 cut(s) | 760, 1298, 1327, 1523, 1721, 1765, 1782 |
| Bse3DI | GCAATG | 1 cut(s) | 1000 |
| BseBI | CCWGG | 3 cut(s) | 29, 1368, 1553 |
| BseDI | CCNNGG | 5 cut(s) | 27, 28, 586, 1044, 1069 |
| BseGI | GGATG | 6 cut(s) | 460, 553, 945, 1054, 1139, 1707 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 81, 385 |
| BseMI | GCAATG | 1 cut(s) | 1000 |
| BseMII | CTCAG | 1 cut(s) | 959 |
| BseNI | ACTGG | 7 cut(s) | 760, 1298, 1327, 1523, 1721, 1765, 1782 |
| BseRI | GAGGAG | 3 cut(s) | 1391, 1563, 1754 |
| BseXI | GCAGC | 2 cut(s) | 10, 613 |
| BseYI | CCCAGC | 1 cut(s) | 1229 |
| BshFI | GGCC | 3 cut(s) | 1385, 1522, 1560 |
| BsiHKAI | GWGCWC | 1 cut(s) | 730 |
| BsiHKCI | CYCGRG | 1 cut(s) | 585 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 81, 385 |
| BsmAI | GTCTC | 2 cut(s) | 635, 1628 |
| BsmBI | CGTCTC | 1 cut(s) | 635 |
| BsmI | GAATGC | 2 cut(s) | 158, 1589 |
| BsnI | GGCC | 3 cut(s) | 1385, 1522, 1560 |
| BsoBI | CYCGRG | 1 cut(s) | 585 |
| Bsp119I | TTCGAA | 1 cut(s) | 1489 |
| Bsp1286I | GDGCHC | 1 cut(s) | 730 |
| Bsp1407I | TGTACA | 3 cut(s) | 114, 1111, 1260 |
| Bsp143I | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| Bsp19I | CCATGG | 1 cut(s) | 1069 |
| BspANI | GGCC | 3 cut(s) | 1385, 1522, 1560 |
| BspCNI | CTCAG | 1 cut(s) | 958 |
| BspHI | TCATGA | 2 cut(s) | 322, 894 |
| BspMI | ACCTGC | 1 cut(s) | 480 |
| BspPI | GGATC | 2 cut(s) | 416, 922 |
| BspT104I | TTCGAA | 1 cut(s) | 1489 |
| BsrDI | GCAATG | 1 cut(s) | 1000 |
| BsrGI | TGTACA | 3 cut(s) | 114, 1111, 1260 |
| BsrI | ACTGG | 7 cut(s) | 760, 1298, 1327, 1523, 1721, 1765, 1782 |
| BssECI | CCNNGG | 5 cut(s) | 27, 28, 586, 1044, 1069 |
| BssMI | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| BssT1I | CCWWGG | 2 cut(s) | 1044, 1069 |
| Bst2UI | CCWGG | 3 cut(s) | 29, 1368, 1553 |
| Bst4CI | ACNGT | 2 cut(s) | 329, 836 |
| BstAUI | TGTACA | 3 cut(s) | 114, 1111, 1260 |
| BstBI | TTCGAA | 1 cut(s) | 1489 |
| BstC8I | GCNNGC | 1 cut(s) | 1387 |
| BstDEI | CTNAG | 2 cut(s) | 401, 945 |
| BstDSI | CCRYGG | 1 cut(s) | 1069 |
| BstF5I | GGATG | 6 cut(s) | 460, 553, 945, 1054, 1139, 1707 |
| BstKTI | GATC | 4 cut(s) | 411, 930, 1087, 1099 |
| BstMAI | GTCTC | 2 cut(s) | 635, 1628 |
| BstMBI | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 56, 1460, 1750 |
| BstNI | CCWGG | 3 cut(s) | 29, 1368, 1553 |
| BstNSI | RCATGY | 4 cut(s) | 115, 1112, 1250, 1267 |
| BstSCI | CCNGG | 3 cut(s) | 27, 1366, 1551 |
| BstSFI | CTRYAG | 1 cut(s) | 1799 |
| BstV1I | GCAGC | 2 cut(s) | 10, 613 |
| BstV2I | GAAGAC | 1 cut(s) | 302 |
| BstX2I | RGATCY | 1 cut(s) | 408 |
| BstYI | RGATCY | 1 cut(s) | 408 |
| BsuI | GTATCC | 1 cut(s) | 979 |
| BsuRI | GGCC | 3 cut(s) | 1385, 1522, 1560 |
| BtgI | CCRYGG | 1 cut(s) | 1069 |
| BtsCI | GGATG | 6 cut(s) | 460, 553, 945, 1054, 1139, 1707 |
| BtsIMutI | CAGTG | 2 cut(s) | 841, 1728 |
| BveI | ACCTGC | 1 cut(s) | 480 |
| Cac8I | GCNNGC | 1 cut(s) | 1387 |
| CciI | TCATGA | 2 cut(s) | 322, 894 |
| Cfr13I | GGNCC | 2 cut(s) | 1310, 1558 |
| CseI | GACGC | 1 cut(s) | 652 |
| Csp6I | GTAC | 5 cut(s) | 115, 788, 1112, 1261, 1516 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1452, 1487 |
| CviQI | GTAC | 5 cut(s) | 115, 788, 1112, 1261, 1516 |
| DdeI | CTNAG | 2 cut(s) | 401, 945 |
| DpnI | GATC | 4 cut(s) | 410, 929, 1086, 1098 |
| DpnII | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| EaeI | YGGCCR | 2 cut(s) | 1383, 1520 |
| Eco130I | CCWWGG | 2 cut(s) | 1044, 1069 |
| Eco32I | GATATC | 1 cut(s) | 500 |
| Eco47I | GGWCC | 1 cut(s) | 1310 |
| Eco57I | CTGAAG | 1 cut(s) | 1731 |
| Eco88I | CYCGRG | 1 cut(s) | 585 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1558 |
| EcoRII | CCWGG | 3 cut(s) | 27, 1366, 1551 |
| EcoRV | GATATC | 1 cut(s) | 500 |
| EcoT14I | CCWWGG | 2 cut(s) | 1044, 1069 |
| EcoT22I | ATGCAT | 2 cut(s) | 1000, 1645 |
| ErhI | CCWWGG | 2 cut(s) | 1044, 1069 |
| Esp3I | CGTCTC | 1 cut(s) | 635 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 34, 66, 83, 115, 1197, 1229 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 627 |
| FokI | GGATG | 6 cut(s) | 467, 560, 952, 1061, 1126, 1714 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 627 |
| FspBI | CTAG | 2 cut(s) | 245, 512 |
| GluI | GCNGC | 2 cut(s) | 24, 627 |
| GsaI | CCCAGC | 1 cut(s) | 1233 |
| GsuI | CTGGAG | 2 cut(s) | 1310, 1574 |
| HaeIII | GGCC | 3 cut(s) | 1385, 1522, 1560 |
| HgaI | GACGC | 1 cut(s) | 652 |
| HincII | GTYRAC | 1 cut(s) | 1770 |
| HindII | GTYRAC | 1 cut(s) | 1770 |
| HindIII | AAGCTT | 1 cut(s) | 1498 |
| HinfI | GANTC | 8 cut(s) | 86, 230, 397, 416, 867, 1192, 1321, 1486 |
| HphI | GGTGA | 4 cut(s) | 400, 950, 1057, 1622 |
| Hpy166II | GTNNAC | 4 cut(s) | 169, 788, 1313, 1770 |
| Hpy188I | TCNGA | 5 cut(s) | 333, 676, 1144, 1170, 1191 |
| Hpy188III | TCNNGA | 8 cut(s) | 323, 895, 974, 1034, 1214, 1288, 1318, 1427 |
| Hpy8I | GTNNAC | 4 cut(s) | 169, 788, 1313, 1770 |
| HpyAV | CCTTC | 4 cut(s) | 267, 445, 753, 972 |
| HpyCH4III | ACNGT | 2 cut(s) | 329, 836 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 56, 1460, 1750 |
| HpyF3I | CTNAG | 2 cut(s) | 401, 945 |
| Kzo9I | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| LmnI | GCTCC | 3 cut(s) | 733, 1741, 1783 |
| Lsp1109I | GCAGC | 2 cut(s) | 10, 613 |
| LweI | GCATC | 3 cut(s) | 1068, 1148, 1261 |
| MaeI | CTAG | 2 cut(s) | 245, 512 |
| MaeIII | GTNAC | 4 cut(s) | 604, 617, 1039, 1784 |
| MalI | GATC | 4 cut(s) | 410, 929, 1086, 1098 |
| MboI | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| MboII | GAAGA | 8 cut(s) | 307, 491, 494, 775, 869, 1556, 1682, 1685 |
| MfeI | CAATTG | 5 cut(s) | 270, 852, 1397, 1577, 1773 |
| MflI | RGATCY | 1 cut(s) | 408 |
| MhlI | GDGCHC | 1 cut(s) | 730 |
| MlsI | TGGCCA | 2 cut(s) | 1385, 1522 |
| MluNI | TGGCCA | 2 cut(s) | 1385, 1522 |
| MmeI | TCCRAC | 3 cut(s) | 955, 1167, 1282 |
| Mox20I | TGGCCA | 2 cut(s) | 1385, 1522 |
| Mph1103I | ATGCAT | 2 cut(s) | 1000, 1645 |
| MroXI | GAANNNNTTC | 2 cut(s) | 871, 902 |
| MscI | TGGCCA | 2 cut(s) | 1385, 1522 |
| MseI | TTAA | 9 cut(s) | 186, 216, 423, 569, 698, 1391, 1496, 1563, 1596 |
| Msp20I | TGGCCA | 2 cut(s) | 1385, 1522 |
| MspR9I | CCNGG | 3 cut(s) | 29, 1368, 1553 |
| MunI | CAATTG | 5 cut(s) | 270, 852, 1397, 1577, 1773 |
| Mva1269I | GAATGC | 2 cut(s) | 158, 1589 |
| MvaI | CCWGG | 3 cut(s) | 29, 1368, 1553 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 56, 1460, 1750 |
| NcoI | CCATGG | 1 cut(s) | 1069 |
| NdeII | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| NmuCI | GTSAC | 3 cut(s) | 604, 617, 1784 |
| NsiI | ATGCAT | 2 cut(s) | 1000, 1645 |
| NspI | RCATGY | 4 cut(s) | 115, 1112, 1250, 1267 |
| NspV | TTCGAA | 1 cut(s) | 1489 |
| PagI | TCATGA | 2 cut(s) | 322, 894 |
| PasI | CCCWGGG | 1 cut(s) | 28 |
| PciI | ACATGT | 2 cut(s) | 1108, 1263 |
| PctI | GAATGC | 2 cut(s) | 158, 1589 |
| PdmI | GAANNNNTTC | 2 cut(s) | 871, 902 |
| PfeI | GAWTC | 8 cut(s) | 86, 230, 397, 416, 867, 1192, 1321, 1486 |
| PfoI | TCCNGGA | 2 cut(s) | 1366, 1551 |
| PkrI | GCNGC | 2 cut(s) | 25, 628 |
| PscI | ACATGT | 2 cut(s) | 1108, 1263 |
| Psp6I | CCWGG | 3 cut(s) | 27, 1366, 1551 |
| PspFI | CCCAGC | 1 cut(s) | 1229 |
| PspGI | CCWGG | 3 cut(s) | 27, 1366, 1551 |
| PspPI | GGNCC | 2 cut(s) | 1310, 1558 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 89, 121, 808, 840 |
| PsuI | RGATCY | 1 cut(s) | 408 |
| RsaI | GTAC | 5 cut(s) | 116, 789, 1113, 1262, 1517 |
| RsaNI | GTAC | 5 cut(s) | 115, 788, 1112, 1261, 1516 |
| SaqAI | TTAA | 9 cut(s) | 186, 216, 423, 569, 698, 1391, 1496, 1563, 1596 |
| SatI | GCNGC | 2 cut(s) | 24, 627 |
| Sau3AI | GATC | 4 cut(s) | 408, 927, 1084, 1096 |
| Sau96I | GGNCC | 2 cut(s) | 1310, 1558 |
| ScaI | AGTACT | 1 cut(s) | 1517 |
| ScrFI | CCNGG | 3 cut(s) | 29, 1368, 1553 |
| SduI | GDGCHC | 1 cut(s) | 730 |
| SfaNI | GCATC | 3 cut(s) | 1068, 1148, 1261 |
| SfcI | CTRYAG | 1 cut(s) | 1799 |
| SfuI | TTCGAA | 1 cut(s) | 1489 |
| SinI | GGWCC | 1 cut(s) | 1310 |
| SmlI | CTYRAG | 1 cut(s) | 1736 |
| SmoI | CTYRAG | 1 cut(s) | 1736 |
| SspI | AATATT | 2 cut(s) | 598, 1009 |
| SspMI | CTAG | 2 cut(s) | 245, 512 |
| StyD4I | CCNGG | 3 cut(s) | 27, 1366, 1551 |
| StyI | CCWWGG | 2 cut(s) | 1044, 1069 |
| TaaI | ACNGT | 2 cut(s) | 329, 836 |
| TaqI | TCGA | 2 cut(s) | 973, 1489 |
| TatI | WGTACW | 4 cut(s) | 114, 1111, 1260, 1515 |
| TfiI | GAWTC | 8 cut(s) | 86, 230, 397, 416, 867, 1192, 1321, 1486 |
| Tru1I | TTAA | 9 cut(s) | 186, 216, 423, 569, 698, 1391, 1496, 1563, 1596 |
| Tru9I | TTAA | 9 cut(s) | 186, 216, 423, 569, 698, 1391, 1496, 1563, 1596 |
| TscAI | CASTG | 2 cut(s) | 841, 1728 |
| TseFI | GTSAC | 3 cut(s) | 604, 617, 1784 |
| TseI | GCWGC | 2 cut(s) | 23, 626 |
| Tsp45I | GTSAC | 3 cut(s) | 604, 617, 1784 |
| TspGWI | ACGGA | 2 cut(s) | 152, 1810 |
| TspRI | CASTG | 2 cut(s) | 841, 1728 |
| VpaK11BI | GGWCC | 1 cut(s) | 1310 |
| XapI | RAATTY | 4 cut(s) | 66, 1052, 1292, 1465 |
| XceI | RCATGY | 4 cut(s) | 115, 1112, 1250, 1267 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 976 |
| XmnI | GAANNNNTTC | 2 cut(s) | 871, 902 |
| XspI | CTAG | 2 cut(s) | 245, 512 |
| ZrmI | AGTACT | 1 cut(s) | 1517 |
| Zsp2I | ATGCAT | 2 cut(s) | 1000, 1645 |