RchiOBHm_Chr4g0422541

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
48098809 .. 48100538
1730 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39205

Sequence Viewer

Length: 1677 bp
ATGCGCTCTAAAACAAGTGACCAATGGCGATCAATTTTAAAAAGTAAAACATGGGATTCACCAGAAGGAGAAAAGAGAATTTTTTCAATTTTGAAGTTGAGTTTTGATGAATTGAAACTTCCATCCTTGAAACAATGTTTTGCATATTGCTCGATGTTCTTCAAAGATTTTGATATTGAAAAGGATGACTTGATCCAACTTTGGATGGCTCAGGGATGGCTTCACCCTTGTTCTGACAAAAACCTAGAGATGGAGGATAGAGGTAATGAATATTTTAAAATCCTATTGGCGAAGTCTTTTTTTCAAGACATTACAAAGGATTATGCTGGTAATGTTACCAAATGCAAGATGCACGATCTTGTTCATGATCTTGCAGAACATGTATCAAAATCAAGGAACTTACGCTCACATTTTTCAAATGGAGAAGTCATTGGGAGCAACCTACTTAACTTCAAATCTTTACATGTGTTAAATTTGTACAAAGCAGACATTATGGAGTTGCCCATTTCAATTGGGAAGTTGAAACACTTGAGGTATTTGAATGTCTTGAAAACAAGAATAAAAACATTTCCCAAATCAATAGGTCAGCTTTATAACCTGCAAACTTTGAAAATACCTTATCACCTTGAAGAGTTTCCAAAGGAAATTGCAAATTTGATCAACTTGTGGCATGTTTATTTTGGTAGATATATGAAAGTTCCAAGTGGGATATTGGGACGGTTGACTAATCTCAGGTCATTACCTTTTCTTAAGGTGGGTAATAAGACAGGTCCTGGAATTAGGGAATTGAGTGGTTTAAACCAGTTGCACGACAACTTGTCTATATATGGACTGGAAAATGTAGGAGATGGAGAAGAACTAAAAGCAAACTTGGTCGAGAAGAGACATATACATAAGTTAATCCTTGGATGGAAGCTTAGTAGGCCAAGCCACTATGTGGAGAATGACGATGATGTACTAGAAGGCCTCCGACCACATTCTAGTTTGGAATTCTTGGAGATTCAGGGATTCAGGGGTATTAAATTTCCATCATGGTTATTGGTAGCTAACAATTTGAAAGAGATTAAATTATTGGGCTGCAACAATTGTGAAGGAGTCCCAGTACTTGGGCATCTACCCAATCTTAGTTGTGTTGAGATTAAGAGAATGGAGAATCTAACTCTTATAGGATCTGAGTTTTATGGGGATAACCATGTCAACTGTGGAAATGGATCAAGTAAGGAGGCGAGGCCTTTGTTCCCTGCTTTGAAAACATTGTGTATTGAGGAGGCCCGGAACTTGATTGAATGGATGGAAGCGCCAACAGAAAGAGCAAGTGTGGTGTTTCCATGCCTCGAGGAACTGACCTTGATCGACTGTGACCAACTGATAAGTGCTCCTAGTCATTTCCCATCTCTCAAGAAATTGGTGATAGAAAACATGGAGAATGGAGGCATGCCAATAGCAAGTATTTTAAGCAATCAACTCACCACTCTCACTCATCTCAGGTTATGGTATGTGGGCGGACCTACTTGTCTGCCGGAAGGGATGTTAGAAAACAACAAGAATCTTGCACATTTAGACATAGTTGATTGTTCAGAGCTAACTTGTATTTCTCCCCAATCACAAGGATTTGAGTACTGCTGCGCATCTCTTTCATATTTGCGGATATGGGATTATGACGTTGTGGCATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

558

Amino Acids

63.63

Weight (kDa)

6.56

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 52 - 125 1.8e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 141 - 383 2.9e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 260 - 383 9.8e-34 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 594
AasI GACNNNNNNGTC 1 cut(s) 1512
AbsI CCTCGAGG 1 cut(s) 1334
Acc16I TGCGCA 1 cut(s) 1627
Acc36I ACCTGC 1 cut(s) 606
AccB7I CCANNNNNTGG 2 cut(s) 937, 1106
AciI CCGC 2 cut(s) 1503, 1645
AclWI GGATC 3 cut(s) 187, 1177, 1219
AcsI RAATTY 5 cut(s) 78, 472, 652, 989, 1022
AdeI CACNNNGTG 1 cut(s) 937
AfaI GTAC 4 cut(s) 479, 957, 1104, 1619
AfiI CCNNNNNNNGG 3 cut(s) 250, 937, 1106
AflII CTTAAG 1 cut(s) 749
AflIII ACRYGT 2 cut(s) 379, 463
AhdI GACNNNNNGTC 1 cut(s) 817
AjnI CCWGG 1 cut(s) 772
AluBI AGCT 4 cut(s) 589, 916, 1046, 1582
AluI AGCT 4 cut(s) 589, 916, 1046, 1582
Alw21I GWGCWC 1 cut(s) 1378
Alw26I GTCTC 1 cut(s) 877
AlwI GGATC 3 cut(s) 187, 1177, 1219
AlwNI CAGNNNCTG 1 cut(s) 773
Ama87I CYCGRG 1 cut(s) 1334
AoxI GGCC 4 cut(s) 923, 964, 1229, 1269
ApeKI GCWGC 2 cut(s) 1077, 1623
ApoI RAATTY 5 cut(s) 78, 472, 652, 989, 1022
Asp700I GAANNNNTTC 2 cut(s) 82, 633
AspLEI GCGC 3 cut(s) 6, 1300, 1628
AspS9I GGNCC 3 cut(s) 770, 1270, 1505
AsuC2I CCSGG 1 cut(s) 1273
AsuHPI GGTGA 5 cut(s) 51, 215, 614, 1420, 1459
AvaI CYCGRG 1 cut(s) 1334
AvaII GGWCC 2 cut(s) 770, 1505
Bbv12I GWGCWC 1 cut(s) 1378
BbvI GCAGC 2 cut(s) 1064, 1610
BccI CCATC 9 cut(s) 130, 199, 210, 244, 842, 903, 1036, 1285, 1399
BcgI CGANNNNNNTGC 2 cut(s) 132, 166
BciT130I CCWGG 1 cut(s) 774
BclI TGATCA 1 cut(s) 657
BcnI CCSGG 1 cut(s) 1273
BcoDI GTCTC 1 cut(s) 877
BfaI CTAG 4 cut(s) 245, 959, 981, 1380
BfoI RGCGCY 1 cut(s) 1301
BfrI CTTAAG 1 cut(s) 749
BfuAI ACCTGC 1 cut(s) 606
BisI GCNGC 2 cut(s) 1078, 1624
BlsI GCNGC 2 cut(s) 1079, 1625
BmcAI AGTACT 2 cut(s) 1104, 1619
Bme1390I CCNGG 2 cut(s) 774, 1273
Bme18I GGWCC 2 cut(s) 770, 1505
BmeRI GACNNNNNGTC 1 cut(s) 817
BmeT110I CYCGRG 1 cut(s) 1334
BmgT120I GGNCC 3 cut(s) 770, 1270, 1505
BmrFI CCNGG 2 cut(s) 774, 1273
BmrI ACTGGG 1 cut(s) 1094
BmsI GCATC 3 cut(s) 339, 1120, 1637
BmuI ACTGGG 1 cut(s) 1094
Bpu10I CCTNAGC 1 cut(s) 210
BpuEI CTTGAG 2 cut(s) 550, 1382
BpuMI CCSGG 1 cut(s) 1273
BsaJI CCNNGG 1 cut(s) 904
BsaXI ACNNNNNCTCC 2 cut(s) 1086, 1116
Bsc4I CCNNNNNNNGG 3 cut(s) 250, 937, 1106
Bse1I ACTGG 3 cut(s) 802, 837, 1100
BseBI CCWGG 1 cut(s) 774
BseDI CCNNGG 1 cut(s) 904
BseGI GGATG 7 cut(s) 122, 190, 210, 221, 914, 1296, 1533
BseLI CCNNNNNNNGG 3 cut(s) 250, 937, 1106
BseMII CTCAG 4 cut(s) 224, 745, 1164, 1498
BseNI ACTGG 3 cut(s) 802, 837, 1100
BseRI GAGGAG 1 cut(s) 1280
BseXI GCAGC 2 cut(s) 1064, 1610
BshFI GGCC 4 cut(s) 925, 966, 1231, 1271
BsiHKAI GWGCWC 1 cut(s) 1378
BsiHKCI CYCGRG 1 cut(s) 1334
BsiSI CCGG 2 cut(s) 1273, 1520
BslFI GGGAC 2 cut(s) 729, 1082
BslI CCNNNNNNNGG 3 cut(s) 250, 937, 1106
BsmAI GTCTC 1 cut(s) 877
BsmFI GGGAC 2 cut(s) 729, 1082
BsnI GGCC 4 cut(s) 925, 966, 1231, 1271
BsoBI CYCGRG 1 cut(s) 1334
Bsp1286I GDGCHC 1 cut(s) 1378
Bsp1407I TGTACA 1 cut(s) 477
Bsp143I GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
BspACI CCGC 2 cut(s) 1503, 1645
BspANI GGCC 4 cut(s) 925, 966, 1231, 1271
BspCNI CTCAG 4 cut(s) 223, 744, 1165, 1497
BspHI TCATGA 1 cut(s) 364
BspMI ACCTGC 1 cut(s) 606
BspPI GGATC 3 cut(s) 187, 1177, 1219
BspTI CTTAAG 1 cut(s) 749
BsrGI TGTACA 1 cut(s) 477
BsrI ACTGG 3 cut(s) 802, 837, 1100
BssECI CCNNGG 1 cut(s) 904
BssMI GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
BssT1I CCWWGG 1 cut(s) 904
Bst2UI CCWGG 1 cut(s) 774
Bst4CI ACNGT 3 cut(s) 720, 1202, 1358
Bst6I CTCTTC 2 cut(s) 624, 875
BstAFI CTTAAG 1 cut(s) 749
BstAUI TGTACA 1 cut(s) 477
BstC8I GCNNGC 1 cut(s) 1436
BstDEI CTNAG 6 cut(s) 210, 731, 917, 1124, 1173, 1484
BstF5I GGATG 7 cut(s) 122, 190, 210, 221, 914, 1296, 1533
BstH2I RGCGCY 1 cut(s) 1301
BstHHI GCGC 3 cut(s) 6, 1300, 1628
BstKTI GATC 8 cut(s) 32, 195, 358, 370, 660, 1172, 1214, 1353
BstMAI GTCTC 1 cut(s) 877
BstMBI GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
BstMWI GCNNNNNNNGC 1 cut(s) 922
BstNI CCWGG 1 cut(s) 774
BstNSI RCATGY 4 cut(s) 383, 467, 674, 1438
BstSCI CCNGG 2 cut(s) 772, 1271
BstV1I GCAGC 2 cut(s) 1064, 1610
BstX2I RGATCY 1 cut(s) 1169
BstYI RGATCY 1 cut(s) 1169
BsuRI GGCC 4 cut(s) 925, 966, 1231, 1271
BtsCI GGATG 7 cut(s) 122, 190, 210, 221, 914, 1296, 1533
BveI ACCTGC 1 cut(s) 606
Cac8I GCNNGC 1 cut(s) 1436
CaiI CAGNNNCTG 1 cut(s) 773
CciI TCATGA 1 cut(s) 364
CfoI GCGC 3 cut(s) 6, 1300, 1628
Cfr13I GGNCC 3 cut(s) 770, 1270, 1505
Csp6I GTAC 4 cut(s) 478, 956, 1103, 1618
CviQI GTAC 4 cut(s) 478, 956, 1103, 1618
DdeI CTNAG 6 cut(s) 210, 731, 917, 1124, 1173, 1484
DpnI GATC 8 cut(s) 31, 194, 357, 369, 659, 1171, 1213, 1352
DpnII GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
DraI TTTAAA 3 cut(s) 39, 277, 798
DraIII CACNNNGTG 1 cut(s) 937
DrdI GACNNNNNNGTC 1 cut(s) 1512
DriI GACNNNNNGTC 1 cut(s) 817
DseDI GACNNNNNNGTC 1 cut(s) 1512
Eam1104I CTCTTC 2 cut(s) 624, 875
Eam1105I GACNNNNNGTC 1 cut(s) 817
EarI CTCTTC 2 cut(s) 624, 875
EciI GGCGGA 1 cut(s) 1518
Eco130I CCWWGG 1 cut(s) 904
Eco147I AGGCCT 2 cut(s) 966, 1231
Eco47I GGWCC 2 cut(s) 770, 1505
Eco88I CYCGRG 1 cut(s) 1334
EcoO109I RGGNCCY 1 cut(s) 770
EcoRI GAATTC 1 cut(s) 989
EcoRII CCWGG 1 cut(s) 772
EcoT14I CCWWGG 1 cut(s) 904
ErhI CCWWGG 1 cut(s) 904
FalI AAGNNNNNCTT 2 cut(s) 173, 205
FaqI GGGAC 2 cut(s) 729, 1082
FbaI TGATCA 1 cut(s) 657
Fnu4HI GCNGC 2 cut(s) 1078, 1624
FokI GGATG 7 cut(s) 109, 197, 217, 228, 921, 1303, 1540
Fsp4HI GCNGC 2 cut(s) 1078, 1624
FspBI CTAG 4 cut(s) 245, 959, 981, 1380
FspI TGCGCA 1 cut(s) 1627
GlaI GCGC 3 cut(s) 5, 1299, 1627
GluI GCNGC 2 cut(s) 1078, 1624
HaeII RGCGCY 1 cut(s) 1301
HaeIII GGCC 4 cut(s) 925, 966, 1231, 1271
HapII CCGG 2 cut(s) 1273, 1520
HhaI GCGC 3 cut(s) 6, 1300, 1628
Hin6I GCGC 3 cut(s) 4, 1298, 1626
HinP1I GCGC 3 cut(s) 4, 1298, 1626
HincII GTYRAC 2 cut(s) 723, 1198
HindII GTYRAC 2 cut(s) 723, 1198
HindIII AAGCTT 1 cut(s) 914
HinfI GANTC 6 cut(s) 56, 1000, 1008, 1095, 1153, 1546
HpaII CCGG 2 cut(s) 1273, 1520
HphI GGTGA 5 cut(s) 51, 215, 614, 1420, 1459
Hpy166II GTNNAC 2 cut(s) 723, 1198
Hpy188I TCNGA 4 cut(s) 235, 971, 1174, 1579
Hpy188III TCNNGA 5 cut(s) 305, 365, 547, 877, 1399
Hpy8I GTNNAC 2 cut(s) 723, 1198
HpyAV CCTTC 4 cut(s) 59, 956, 1085, 1517
HpyCH4III ACNGT 3 cut(s) 720, 1202, 1358
HpyCH4IV ACGT 1 cut(s) 1662
HpyCH4V TGCA 9 cut(s) 143, 345, 352, 374, 601, 650, 808, 1080, 1553
HpyF10VI GCNNNNNNNGC 1 cut(s) 922
HpyF3I CTNAG 6 cut(s) 210, 731, 917, 1124, 1173, 1484
HpySE526I ACGT 1 cut(s) 1662
HspAI GCGC 3 cut(s) 4, 1298, 1626
Ksp22I TGATCA 1 cut(s) 657
Kzo9I GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
LmnI GCTCC 2 cut(s) 435, 1381
Lsp1109I GCAGC 2 cut(s) 1064, 1610
LweI GCATC 3 cut(s) 339, 1120, 1637
MaeI CTAG 4 cut(s) 245, 959, 981, 1380
MaeII ACGT 1 cut(s) 1662
MaeIII GTNAC 3 cut(s) 17, 334, 1358
MalI GATC 8 cut(s) 31, 194, 357, 369, 659, 1171, 1213, 1352
MboI GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
MboII GAAGA 4 cut(s) 151, 641, 866, 892
MfeI CAATTG 2 cut(s) 510, 1084
MflI RGATCY 1 cut(s) 1169
MhlI GDGCHC 1 cut(s) 1378
MlyI GAGTC 1 cut(s) 1104
MmeI TCCRAC 2 cut(s) 220, 994
MroXI GAANNNNTTC 2 cut(s) 82, 633
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 2 cut(s) 1273, 1520
MspR9I CCNGG 2 cut(s) 774, 1273
MssI GTTTAAAC 1 cut(s) 798
MunI CAATTG 2 cut(s) 510, 1084
MvaI CCWGG 1 cut(s) 774
MwoI GCNNNNNNNGC 1 cut(s) 922
NciI CCSGG 1 cut(s) 1273
NdeII GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
NmuCI GTSAC 2 cut(s) 17, 1358
NsbI TGCGCA 1 cut(s) 1627
NspI RCATGY 4 cut(s) 383, 467, 674, 1438
PaeI GCATGC 1 cut(s) 1438
PaeR7I CTCGAG 1 cut(s) 1334
PagI TCATGA 1 cut(s) 364
PceI AGGCCT 2 cut(s) 966, 1231
PciI ACATGT 2 cut(s) 379, 463
PdmI GAANNNNTTC 2 cut(s) 82, 633
PfeI GAWTC 5 cut(s) 56, 1000, 1008, 1153, 1546
PflMI CCANNNNNTGG 2 cut(s) 937, 1106
PfoI TCCNGGA 1 cut(s) 772
PkrI GCNGC 2 cut(s) 1079, 1625
PleI GAGTC 1 cut(s) 1103
PmeI GTTTAAAC 1 cut(s) 798
PpsI GAGTC 1 cut(s) 1103
PpuMI RGGWCCY 1 cut(s) 770
PscI ACATGT 2 cut(s) 379, 463
PsiI TTATAA 1 cut(s) 594
Psp5II RGGWCCY 1 cut(s) 770
Psp6I CCWGG 1 cut(s) 772
PspGI CCWGG 1 cut(s) 772
PspPI GGNCC 3 cut(s) 770, 1270, 1505
PspPPI RGGWCCY 1 cut(s) 770
PspXI VCTCGAGB 1 cut(s) 1334
PstNI CAGNNNCTG 1 cut(s) 773
PsuI RGATCY 1 cut(s) 1169
RsaI GTAC 4 cut(s) 479, 957, 1104, 1619
RsaNI GTAC 4 cut(s) 478, 956, 1103, 1618
SatI GCNGC 2 cut(s) 1078, 1624
Sau3AI GATC 8 cut(s) 29, 192, 355, 367, 657, 1169, 1211, 1350
Sau96I GGNCC 3 cut(s) 770, 1270, 1505
ScaI AGTACT 2 cut(s) 1104, 1619
SchI GAGTC 1 cut(s) 1104
ScrFI CCNGG 2 cut(s) 774, 1273
SduI GDGCHC 1 cut(s) 1378
SfaNI GCATC 3 cut(s) 339, 1120, 1637
Sfr274I CTCGAG 1 cut(s) 1334
SinI GGWCC 2 cut(s) 770, 1505
SlaI CTCGAG 1 cut(s) 1334
SmlI CTYRAG 4 cut(s) 529, 749, 1334, 1397
SmoI CTYRAG 4 cut(s) 529, 749, 1334, 1397
SphI GCATGC 1 cut(s) 1438
SseBI AGGCCT 2 cut(s) 966, 1231
SsiI CCGC 2 cut(s) 1503, 1645
SspI AATATT 1 cut(s) 272
SspMI CTAG 4 cut(s) 245, 959, 981, 1380
StuI AGGCCT 2 cut(s) 966, 1231
StyD4I CCNGG 2 cut(s) 772, 1271
StyI CCWWGG 1 cut(s) 904
TaaI ACNGT 3 cut(s) 720, 1202, 1358
TaiI ACGT 1 cut(s) 1665
TaqI TCGA 4 cut(s) 152, 876, 1335, 1353
TatI WGTACW 4 cut(s) 477, 955, 1102, 1617
TfiI GAWTC 5 cut(s) 56, 1000, 1008, 1153, 1546
TseFI GTSAC 2 cut(s) 17, 1358
TseI GCWGC 2 cut(s) 1077, 1623
Tsp45I GTSAC 2 cut(s) 17, 1358
TspDTI ATGAA 5 cut(s) 123, 282, 353, 707, 1626
Van91I CCANNNNNTGG 2 cut(s) 937, 1106
Vha464I CTTAAG 1 cut(s) 749
VpaK11BI GGWCC 2 cut(s) 770, 1505
XapI RAATTY 5 cut(s) 78, 472, 652, 989, 1022
XceI RCATGY 4 cut(s) 383, 467, 674, 1438
XcmI CCANNNNNNNNNTGG 1 cut(s) 1199
XhoI CTCGAG 1 cut(s) 1334
XmnI GAANNNNTTC 2 cut(s) 82, 633
XspI CTAG 4 cut(s) 245, 959, 981, 1380
ZrmI AGTACT 2 cut(s) 1104, 1619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.