Rmu_sc0011228.1_g000007

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011228.1
Physical Location & Seq
Reverse (-)
25317 .. 27613
2297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011228.1_g000007.1.cds

Sequence Viewer

Length: 1992 bp
atggctgaatttctcacttttggtgctgaagaattgctgaagaaagtgggttcactggccgctcaagagtttgatcttgtatggggattccatggagaaataacaaagctgcgtaagtcggtgtccatgcttgaggctgtgctacgagctgcccaacatccgcgacatgatcagggagatgctgtgaagctctgggtgaaggagcttgaagacatagctcagaatgctgatgatgtgctggatgattatggatatgagcttctccggcgtaaggtgcaactgcgaaatcagatgaagaaaaaggtgcataactttttttccctctccaatcccatcttttttcgtgttaaaatggcacataaaattaagaagatcaacacatcattggatgagttgaataagaaggcaagtactattggcttatttgctagaccatccttagatgcaacaacttcccagggtataagcattgacagggaaacctactctatcttaaaacaagatgaaaacaatatcattggaagggacgatgttgtggcaaatattgttcaagccctgaccaaatcaaaccaaaatctggaaagtgatctctcggttctggccattgtgggtatgggaggtcttggaaagacaactttggctaaatcaatatatcatgaatcagagataagtaggcactttgagaaaaagatgtggatatgtgtatctaccccttttgaagtcaattcaattctgagagggatcctggaatatcttaaaccagaaaatgctgcggtgaaaggtatcgatgcaatatgtaatattctccgaaaagagttgaaaggaaagagataccttcttatacttgatgatgtgtggaatgaagatgttgaaaaatggaatgatttgaagagttgcttgctaaaaattaccgatgaccaaggaagcagcattgttgtcactactcgcagtgacaaagttggaaaaacggtggaaacccttcctaggtgtgatttgagaaaactatcagattatgagtgttggcttatattgaagaataaagcagttccagtcggaagtgctcctatacttgaagatcaagagacaattggaagggagattgccaaaaagtgtggaggtataccattagtggcaaaggtattaggaaacattatgcgctctaaaacaagcaatgaatggagtgcaattatggaaagtaaaatgtgggatttaccggaagaagaagaaagaatcatgtcaattttaaagttgagttttgatgaattgaaattttcatcattgaaacaatgttttgcatattgctcggaattcatcaaagactttgtaatggaaaaggatgacttagtccaactttggatggctcaaggatggcttcagcccaccaaaagtaatatggagatggaggatatagggaacgaatatttcaacattttatcagaaaaatccctttttgaagacgttagaatgtatcatgatggtaatgtaagatgcaagatgcacgatcttgtgcatgaccttgcaggacgagtgtcaaacatgacaaaatgccgctcactctttcccaagggagaagcactcaggaagaccttgcctaactttagatctttacgtgtcttaaatttatacaaggcagacattgacaagttgccgagttcaattggaaagttgacacacttgaggtctctgaatgttatgaaaacaagagtgaaggcatttccaaaatctattggtcaactttattaccttcagacgtttaaaatgccctatcatgttgaagagttcccaaagatgatagctaatatgatcaacttgagacatgtttattttggtaaacatgcgaaagttcctgctgggatattgggaagattgacgaatcttagatcattatcttttctgaaggtgggtaaggaaactgggcctaggattgaggaaagaatatgcagggacctctggccttttataagggcttcatcccaaattttggacggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

663

Amino Acids

75.72

Weight (kDa)

8.92

Isoelectric Point (pI)

45.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1961
AccB7I CCANNNNNTGG 2 cut(s) 577, 1981
AccBSI CCGCTC 2 cut(s) 62, 1551
AccI GTMKAC 1 cut(s) 1120
AccII CGCG 1 cut(s) 163
AciI CCGC 4 cut(s) 60, 161, 773, 1549
AclWI GGATC 2 cut(s) 736, 749
AcoI YGGCCR 2 cut(s) 57, 600
AcsI RAATTY 5 cut(s) 8, 1268, 1307, 1618, 1977
AcuI CTGAAG 5 cut(s) 48, 59, 1358, 1730, 1916
AfaI GTAC 1 cut(s) 412
AfiI CCNNNNNNNGG 4 cut(s) 271, 577, 984, 1981
AflIII ACRYGT 2 cut(s) 1609, 1816
AjnI CCWGG 2 cut(s) 456, 744
AluBI AGCT 7 cut(s) 109, 149, 190, 205, 218, 259, 1796
AluI AGCT 7 cut(s) 109, 149, 190, 205, 218, 259, 1796
Alw21I GWGCWC 1 cut(s) 1063
Alw26I GTCTC 3 cut(s) 1076, 1686, 1807
AlwI GGATC 2 cut(s) 736, 749
AoxI GGCC 4 cut(s) 57, 600, 1916, 1952
ApeKI GCWGC 4 cut(s) 109, 149, 770, 927
ApoI RAATTY 5 cut(s) 8, 1268, 1307, 1618, 1977
Asp700I GAANNNNTTC 1 cut(s) 978
AspA2I CCTAGG 2 cut(s) 983, 1919
AspLEI GCGC 1 cut(s) 1158
AspS9I GGNCC 2 cut(s) 1916, 1945
AsuHPI GGTGA 2 cut(s) 208, 787
AvaII GGWCC 1 cut(s) 1945
AvrII CCTAGG 2 cut(s) 983, 1919
BalI TGGCCA 1 cut(s) 602
BamHI GGATCC 1 cut(s) 741
BbsI GAAGAC 3 cut(s) 216, 1461, 1589
Bbv12I GWGCWC 1 cut(s) 1063
BbvI GCAGC 4 cut(s) 96, 136, 757, 939
BccI CCATC 6 cut(s) 341, 442, 1351, 1362, 1393, 1469
BcgI CGANNNNNNTGC 2 cut(s) 1284, 1318
BciT130I CCWGG 2 cut(s) 458, 746
BclI TGATCA 2 cut(s) 169, 1803
BcoDI GTCTC 3 cut(s) 1076, 1686, 1807
BfaI CTAG 4 cut(s) 429, 984, 1920, 1990
BglII AGATCT 1 cut(s) 1601
BisI GCNGC 6 cut(s) 60, 110, 150, 771, 928, 1549
BlnI CCTAGG 2 cut(s) 983, 1919
BlsI GCNGC 6 cut(s) 61, 111, 151, 772, 929, 1550
BmcAI AGTACT 1 cut(s) 412
Bme1390I CCNGG 2 cut(s) 458, 746
Bme18I GGWCC 1 cut(s) 1945
BmgT120I GGNCC 2 cut(s) 1916, 1945
BmiI GGNNCC 2 cut(s) 743, 1946
BmrFI CCNGG 2 cut(s) 458, 746
BmrI ACTGGG 1 cut(s) 1923
BmsI GCATC 5 cut(s) 169, 433, 778, 1478, 1485
BmuI ACTGGG 1 cut(s) 1923
BoxI GACNNNNGTC 1 cut(s) 1528
BpiI GAAGAC 3 cut(s) 216, 1461, 1589
BplI GAGNNNNNCTC 2 cut(s) 1560, 1592
BpuEI CTTGAG 5 cut(s) 48, 152, 1347, 1696, 1831
Bsa29I ATCGAT 1 cut(s) 786
BsaAI YACGTR 1 cut(s) 1610
BsaBI GATNNNNATC 1 cut(s) 1885
BsaI GGTCTC 1 cut(s) 1686
BsaJI CCNNGG 7 cut(s) 91, 456, 457, 919, 983, 1563, 1919
BsaWI WCCGGW 1 cut(s) 1213
BsaXI ACNNNNNCTCC 2 cut(s) 168, 198
Bsc4I CCNNNNNNNGG 4 cut(s) 271, 577, 984, 1981
Bse1I ACTGG 3 cut(s) 60, 1049, 1918
Bse3DI GCAATG 1 cut(s) 1177
Bse8I GATNNNNATC 1 cut(s) 1885
BseBI CCWGG 2 cut(s) 458, 746
BseCI ATCGAT 1 cut(s) 786
BseDI CCNNGG 7 cut(s) 91, 456, 457, 919, 983, 1563, 1919
BseGI GGATG 8 cut(s) 157, 247, 394, 434, 1342, 1362, 1373, 1970
BseJI GATNNNNATC 1 cut(s) 1885
BseLI CCNNNNNNNGG 4 cut(s) 271, 577, 984, 1981
BseMI GCAATG 1 cut(s) 1177
BseMII CTCAG 3 cut(s) 233, 725, 1591
BseNI ACTGG 3 cut(s) 60, 1049, 1918
BseXI GCAGC 4 cut(s) 96, 136, 757, 939
BseYI CCCAGC 1 cut(s) 1850
Bsh1236I CGCG 1 cut(s) 163
BshFI GGCC 4 cut(s) 59, 602, 1918, 1954
BshVI ATCGAT 1 cut(s) 786
BsiHKAI GWGCWC 1 cut(s) 1063
BsiSI CCGG 2 cut(s) 265, 1214
BslFI GGGAC 2 cut(s) 539, 1958
BslI CCNNNNNNNGG 4 cut(s) 271, 577, 984, 1981
BsmAI GTCTC 3 cut(s) 1076, 1686, 1807
BsmFI GGGAC 2 cut(s) 539, 1958
BsmI GAATGC 1 cut(s) 229
BsnI GGCC 4 cut(s) 59, 602, 1918, 1954
Bso31I GGTCTC 1 cut(s) 1686
Bsp1286I GDGCHC 1 cut(s) 1063
Bsp19I CCATGG 1 cut(s) 91
BspACI CCGC 4 cut(s) 60, 161, 773, 1549
BspANI GGCC 4 cut(s) 59, 602, 1918, 1954
BspCNI CTCAG 3 cut(s) 232, 726, 1590
BspDI ATCGAT 1 cut(s) 786
BspFNI CGCG 1 cut(s) 163
BspHI TCATGA 2 cut(s) 655, 1471
BspLI GGNNCC 2 cut(s) 743, 1946
BspPI GGATC 2 cut(s) 736, 749
BspTNI GGTCTC 1 cut(s) 1686
BsrBI CCGCTC 2 cut(s) 62, 1551
BsrDI GCAATG 1 cut(s) 1177
BsrI ACTGG 3 cut(s) 60, 1049, 1918
BssECI CCNNGG 7 cut(s) 91, 456, 457, 919, 983, 1563, 1919
BssNAI GTATAC 1 cut(s) 1121
BssT1I CCWWGG 5 cut(s) 91, 919, 983, 1563, 1919
Bst1107I GTATAC 1 cut(s) 1121
Bst2UI CCWGG 2 cut(s) 458, 746
Bst4CI ACNGT 1 cut(s) 970
Bst6I CTCTTC 2 cut(s) 884, 1770
BstBAI YACGTR 1 cut(s) 1610
BstC8I GCNNGC 1 cut(s) 899
BstDEI CTNAG 6 cut(s) 219, 439, 734, 1342, 1577, 1877
BstDSI CCRYGG 1 cut(s) 91
BstF5I GGATG 8 cut(s) 157, 247, 394, 434, 1342, 1362, 1373, 1970
BstFNI CGCG 1 cut(s) 163
BstHHI GCGC 1 cut(s) 1158
BstMAI GTCTC 3 cut(s) 1076, 1686, 1807
BstMWI GCNNNNNNNGC 3 cut(s) 224, 265, 274
BstNI CCWGG 2 cut(s) 458, 746
BstNSI RCATGY 2 cut(s) 1820, 1838
BstPAI GACNNNNGTC 1 cut(s) 1528
BstSCI CCNGG 2 cut(s) 456, 744
BstUI CGCG 1 cut(s) 163
BstV1I GCAGC 4 cut(s) 96, 136, 757, 939
BstV2I GAAGAC 3 cut(s) 216, 1461, 1589
BstX2I RGATCY 2 cut(s) 741, 1601
BstYI RGATCY 2 cut(s) 741, 1601
BstZ17I GTATAC 1 cut(s) 1121
Bsu15I ATCGAT 1 cut(s) 786
BsuRI GGCC 4 cut(s) 59, 602, 1918, 1954
BsuTUI ATCGAT 1 cut(s) 786
BtgI CCRYGG 1 cut(s) 91
BtsCI GGATG 8 cut(s) 157, 247, 394, 434, 1342, 1362, 1373, 1970
BtsI GCAGTG 1 cut(s) 955
BtsIMutI CAGTG 2 cut(s) 53, 955
Cac8I GCNNGC 1 cut(s) 899
CciI TCATGA 2 cut(s) 655, 1471
CfoI GCGC 1 cut(s) 1158
Cfr13I GGNCC 2 cut(s) 1916, 1945
ClaI ATCGAT 1 cut(s) 786
Csp6I GTAC 1 cut(s) 411
CspCI CAANNNNNGTGG 2 cut(s) 1093, 1128
CviQI GTAC 1 cut(s) 411
DdeI CTNAG 6 cut(s) 219, 439, 734, 1342, 1577, 1877
DraI TTTAAA 2 cut(s) 1245, 1756
EaeI YGGCCR 2 cut(s) 57, 600
Eam1104I CTCTTC 2 cut(s) 884, 1770
EarI CTCTTC 2 cut(s) 884, 1770
Eco130I CCWWGG 5 cut(s) 91, 919, 983, 1563, 1919
Eco31I GGTCTC 1 cut(s) 1686
Eco47I GGWCC 1 cut(s) 1945
Eco57I CTGAAG 5 cut(s) 48, 59, 1358, 1730, 1916
EcoO109I RGGNCCY 1 cut(s) 1945
EcoRI GAATTC 1 cut(s) 1307
EcoRII CCWGG 2 cut(s) 456, 744
EcoT14I CCWWGG 5 cut(s) 91, 919, 983, 1563, 1919
ErhI CCWWGG 5 cut(s) 91, 919, 983, 1563, 1919
FalI AAGNNNNNCTT 6 cut(s) 881, 913, 1325, 1357, 1356, 1388
FaqI GGGAC 2 cut(s) 539, 1958
FbaI TGATCA 2 cut(s) 169, 1803
FblI GTMKAC 1 cut(s) 1120
Fnu4HI GCNGC 6 cut(s) 60, 110, 150, 771, 928, 1549
FokI GGATG 8 cut(s) 144, 254, 401, 421, 1349, 1369, 1380, 1957
Fsp4HI GCNGC 6 cut(s) 60, 110, 150, 771, 928, 1549
FspBI CTAG 4 cut(s) 429, 984, 1920, 1990
GlaI GCGC 1 cut(s) 1157
GluI GCNGC 6 cut(s) 60, 110, 150, 771, 928, 1549
GsaI CCCAGC 1 cut(s) 1854
HaeIII GGCC 4 cut(s) 59, 602, 1918, 1954
HapII CCGG 2 cut(s) 265, 1214
HhaI GCGC 1 cut(s) 1158
Hin6I GCGC 1 cut(s) 1156
HinP1I GCGC 1 cut(s) 1156
HincII GTYRAC 2 cut(s) 1668, 1733
HindII GTYRAC 2 cut(s) 1668, 1733
HinfI GANTC 4 cut(s) 87, 659, 1230, 1873
HpaII CCGG 2 cut(s) 265, 1214
HphI GGTGA 2 cut(s) 208, 787
Hpy166II GTNNAC 5 cut(s) 53, 1121, 1668, 1733, 1832
Hpy188III TCNNGA 6 cut(s) 65, 578, 656, 1079, 1472, 1579
Hpy8I GTNNAC 5 cut(s) 53, 1121, 1668, 1733, 1832
HpyAV CCTTC 9 cut(s) 193, 397, 516, 845, 989, 1086, 1702, 1754, 1891
HpyCH4III ACNGT 1 cut(s) 970
HpyCH4IV ACGT 3 cut(s) 1458, 1609, 1751
HpyF10VI GCNNNNNNNGC 3 cut(s) 224, 265, 274
HpyF3I CTNAG 6 cut(s) 219, 439, 734, 1342, 1577, 1877
HpySE526I ACGT 3 cut(s) 1458, 1609, 1751
HspAI GCGC 1 cut(s) 1156
Ksp22I TGATCA 2 cut(s) 169, 1803
LmnI GCTCC 2 cut(s) 202, 1066
Lsp1109I GCAGC 4 cut(s) 96, 136, 757, 939
LweI GCATC 5 cut(s) 169, 433, 778, 1478, 1485
MaeI CTAG 4 cut(s) 429, 984, 1920, 1990
MaeII ACGT 3 cut(s) 1458, 1609, 1751
MaeIII GTNAC 2 cut(s) 937, 950
MbiI CCGCTC 2 cut(s) 62, 1551
MfeI CAATTG 2 cut(s) 1086, 1656
MflI RGATCY 2 cut(s) 741, 1601
MhlI GDGCHC 1 cut(s) 1063
MlsI TGGCCA 1 cut(s) 602
MluNI TGGCCA 1 cut(s) 602
MmeI TCCRAC 3 cut(s) 940, 1033, 1372
MnlI CCTC 9 cut(s) 127, 332, 611, 731, 1109, 1396, 1671, 1921, 1958
Mox20I TGGCCA 1 cut(s) 602
MroXI GAANNNNTTC 1 cut(s) 978
MscI TGGCCA 1 cut(s) 602
MseI TTAA 7 cut(s) 348, 366, 494, 756, 1244, 1616, 1755
Msp20I TGGCCA 1 cut(s) 602
MspI CCGG 2 cut(s) 265, 1214
MspR9I CCNGG 2 cut(s) 458, 746
MunI CAATTG 2 cut(s) 1086, 1656
Mva1269I GAATGC 1 cut(s) 229
MvaI CCWGG 2 cut(s) 458, 746
MvnI CGCG 1 cut(s) 163
MwoI GCNNNNNNNGC 3 cut(s) 224, 265, 274
NcoI CCATGG 1 cut(s) 91
NlaIV GGNNCC 2 cut(s) 743, 1946
NmeAIII GCCGAG 1 cut(s) 1674
NmuCI GTSAC 2 cut(s) 937, 950
NspI RCATGY 2 cut(s) 1820, 1838
PagI TCATGA 2 cut(s) 655, 1471
PasI CCCWGGG 1 cut(s) 457
PciI ACATGT 1 cut(s) 1816
PctI GAATGC 1 cut(s) 229
PdmI GAANNNNTTC 1 cut(s) 978
PfeI GAWTC 4 cut(s) 87, 659, 1230, 1873
PflFI GACNNNGTC 1 cut(s) 1343
PflMI CCANNNNNTGG 2 cut(s) 577, 1981
PfoI TCCNGGA 1 cut(s) 744
PkrI GCNGC 6 cut(s) 61, 111, 151, 772, 929, 1550
Ppu21I YACGTR 1 cut(s) 1610
PpuMI RGGWCCY 1 cut(s) 1945
PscI ACATGT 1 cut(s) 1816
PshAI GACNNNNGTC 1 cut(s) 1528
PsiI TTATAA 1 cut(s) 1961
Psp5II RGGWCCY 1 cut(s) 1945
Psp6I CCWGG 2 cut(s) 456, 744
PspFI CCCAGC 1 cut(s) 1850
PspGI CCWGG 2 cut(s) 456, 744
PspN4I GGNNCC 2 cut(s) 743, 1946
PspPI GGNCC 2 cut(s) 1916, 1945
PspPPI RGGWCCY 1 cut(s) 1945
PsuI RGATCY 2 cut(s) 741, 1601
PsyI GACNNNGTC 1 cut(s) 1343
RsaI GTAC 1 cut(s) 412
RsaNI GTAC 1 cut(s) 411
SaqAI TTAA 7 cut(s) 348, 366, 494, 756, 1244, 1616, 1755
SatI GCNGC 6 cut(s) 60, 110, 150, 771, 928, 1549
Sau96I GGNCC 2 cut(s) 1916, 1945
ScaI AGTACT 1 cut(s) 412
ScrFI CCNGG 2 cut(s) 458, 746
SduI GDGCHC 1 cut(s) 1063
SfaNI GCATC 5 cut(s) 169, 433, 778, 1478, 1485
SinI GGWCC 1 cut(s) 1945
SmlI CTYRAG 5 cut(s) 63, 131, 1362, 1675, 1810
SmoI CTYRAG 5 cut(s) 63, 131, 1362, 1675, 1810
SsiI CCGC 4 cut(s) 60, 161, 773, 1549
SspI AATATT 3 cut(s) 544, 802, 1421
SspMI CTAG 4 cut(s) 429, 984, 1920, 1990
StyD4I CCNGG 2 cut(s) 456, 744
StyI CCWWGG 5 cut(s) 91, 919, 983, 1563, 1919
TaaI ACNGT 1 cut(s) 970
TaiI ACGT 3 cut(s) 1461, 1612, 1754
TaqI TCGA 1 cut(s) 786
TatI WGTACW 1 cut(s) 410
TauI GCSGC 2 cut(s) 62, 1551
TfiI GAWTC 4 cut(s) 87, 659, 1230, 1873
Tru1I TTAA 7 cut(s) 348, 366, 494, 756, 1244, 1616, 1755
Tru9I TTAA 7 cut(s) 348, 366, 494, 756, 1244, 1616, 1755
TscAI CASTG 2 cut(s) 60, 955
TseFI GTSAC 2 cut(s) 937, 950
TseI GCWGC 4 cut(s) 109, 149, 770, 927
Tsp45I GTSAC 2 cut(s) 937, 950
TspRI CASTG 2 cut(s) 60, 955
Tth111I GACNNNGTC 1 cut(s) 1343
Van91I CCANNNNNTGG 2 cut(s) 577, 1981
VpaK11BI GGWCC 1 cut(s) 1945
XapI RAATTY 5 cut(s) 8, 1268, 1307, 1618, 1977
XceI RCATGY 2 cut(s) 1820, 1838
XcmI CCANNNNNNNNNTGG 2 cut(s) 610, 1390
XmaJI CCTAGG 2 cut(s) 983, 1919
XmiI GTMKAC 1 cut(s) 1120
XmnI GAANNNNTTC 1 cut(s) 978
XspI CTAG 4 cut(s) 429, 984, 1920, 1990
ZrmI AGTACT 1 cut(s) 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.