disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 13 - 99 | 2.1e-20 | Rx N-terminal domain |
| nSTAND1 | PF20703 | 168 - 389 | 1.7e-06 | Novel STAND NTPase 1 |
| NB-ARC | PF00931 | 178 - 350 | 2e-34 | NB-ARC domain |
| AAA_22 | PF13401 | 200 - 312 | 6.1e-06 | AAA domain |
| WHD_DRP | PF23559 | 437 - 497 | 3.7e-15 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 507 - 824 | 2e-27 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 632 - 756 | 2.4e-35 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 1037 - 1192 | 4.6e-11 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1178 - 1237 | 9.9e-08 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1710 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2634 |
| Acc16I | TGCGCA | 1 cut(s) | 2749 |
| Acc36I | ACCTGC | 1 cut(s) | 1722 |
| Acc65I | GGTACC | 1 cut(s) | 3073 |
| AccB1I | GGYRCC | 1 cut(s) | 3073 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2056, 2225, 2969 |
| AccBSI | CCGCTC | 1 cut(s) | 3765 |
| AccI | GTMKAC | 3 cut(s) | 156, 1123, 3364 |
| AccII | CGCG | 3 cut(s) | 794, 2350, 3195 |
| AccIII | TCCGGA | 1 cut(s) | 2995 |
| AciI | CCGC | 5 cut(s) | 1783, 2550, 3195, 3325, 3765 |
| AclWI | GGATC | 6 cut(s) | 210, 863, 1342, 2296, 2341, 3453 |
| AcoI | YGGCCR | 1 cut(s) | 3776 |
| AcuI | CTGAAG | 1 cut(s) | 3683 |
| AdeI | CACNNNGTG | 3 cut(s) | 1496, 2056, 2885 |
| AfaI | GTAC | 9 cut(s) | 471, 1560, 2076, 2223, 2741, 2864, 3029, 3034, 3075 |
| AflII | CTTAAG | 1 cut(s) | 736 |
| AflIII | ACRYGT | 3 cut(s) | 1495, 1579, 3359 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1933 |
| AhlI | ACTAGT | 1 cut(s) | 1129 |
| AjiI | CACGTC | 1 cut(s) | 2453 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 623, 655, 1973, 2005, 3411, 3443 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3845, 3877 |
| Alw21I | GWGCWC | 1 cut(s) | 2500 |
| Alw26I | GTCTC | 7 cut(s) | 83, 1874, 2459, 2894, 3253, 3528, 3650 |
| AlwI | GGATC | 6 cut(s) | 210, 863, 1342, 2296, 2341, 3453 |
| Ama87I | CYCGRG | 2 cut(s) | 2405, 2456 |
| Aor13HI | TCCGGA | 1 cut(s) | 2995 |
| AoxI | GGCC | 8 cut(s) | 412, 1699, 2042, 2083, 2391, 2956, 3215, 3776 |
| ApaI | GGGCCC | 1 cut(s) | 2395 |
| AseI | ATTAAT | 1 cut(s) | 912 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 311, 395, 981, 1237, 1749, 3537 |
| Asp718I | GGTACC | 1 cut(s) | 3073 |
| AspLEI | GCGC | 6 cut(s) | 1161, 2350, 2422, 2750, 3195, 3230 |
| AspS9I | GGNCC | 5 cut(s) | 413, 1886, 2391, 2392, 3215 |
| AsuC2I | CCSGG | 1 cut(s) | 621 |
| AvaI | CYCGRG | 2 cut(s) | 2405, 2456 |
| AvaII | GGWCC | 1 cut(s) | 1886 |
| BaeGI | GKGCMC | 2 cut(s) | 2395, 3208 |
| BalI | TGGCCA | 1 cut(s) | 3778 |
| BanI | GGYRCC | 1 cut(s) | 3073 |
| BanII | GRGCYC | 1 cut(s) | 2395 |
| BauI | CACGAG | 1 cut(s) | 3153 |
| BbsI | GAAGAC | 3 cut(s) | 216, 638, 3639 |
| Bbv12I | GWGCWC | 1 cut(s) | 2500 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1287, 1321 |
| BciVI | GTATCC | 1 cut(s) | 718 |
| BclI | TGATCA | 1 cut(s) | 1773 |
| BcnI | CCSGG | 1 cut(s) | 621 |
| BcoDI | GTCTC | 7 cut(s) | 83, 1874, 2459, 2894, 3253, 3528, 3650 |
| BcuI | ACTAGT | 1 cut(s) | 1129 |
| BfmI | CTRYAG | 1 cut(s) | 3397 |
| BfoI | RGCGCY | 2 cut(s) | 2423, 3231 |
| BfrI | CTTAAG | 1 cut(s) | 736 |
| BfuAI | ACCTGC | 1 cut(s) | 1722 |
| BfuI | GTATCC | 1 cut(s) | 718 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2647 |
| BglII | AGATCT | 2 cut(s) | 100, 259 |
| BmcAI | AGTACT | 3 cut(s) | 2223, 2741, 3029 |
| Bme1390I | CCNGG | 1 cut(s) | 621 |
| Bme18I | GGWCC | 1 cut(s) | 1886 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1933 |
| BmeT110I | CYCGRG | 2 cut(s) | 2405, 2456 |
| BmgBI | CACGTC | 1 cut(s) | 2453 |
| BmgT120I | GGNCC | 5 cut(s) | 413, 1886, 2391, 2392, 3215 |
| BmiI | GGNNCC | 3 cut(s) | 1887, 2393, 3075 |
| BmrFI | CCNGG | 1 cut(s) | 621 |
| BmrI | ACTGGG | 3 cut(s) | 1913, 2213, 2496 |
| BmuI | ACTGGG | 3 cut(s) | 1913, 2213, 2496 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2688, 2991 |
| BpiI | GAAGAC | 3 cut(s) | 216, 638, 3639 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3752, 3784 |
| BpmI | CTGGAG | 2 cut(s) | 475, 2879 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1365 |
| BpuEI | CTTGAG | 7 cut(s) | 51, 441, 906, 1568, 1850, 2504, 3503 |
| BpuMI | CCSGG | 1 cut(s) | 621 |
| BsaAI | YACGTR | 1 cut(s) | 1580 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3719 |
| BsaI | GGTCTC | 1 cut(s) | 2894 |
| BsaJI | CCNNGG | 3 cut(s) | 30, 45, 3069 |
| BsaWI | WCCGGW | 3 cut(s) | 288, 595, 2995 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2205, 2235, 2482, 2512 |
| Bse1I | ACTGG | 5 cut(s) | 1908, 1918, 1953, 2219, 2502 |
| Bse3DI | GCAATG | 3 cut(s) | 333, 2375, 3693 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3719 |
| BseAI | TCCGGA | 1 cut(s) | 2995 |
| BseDI | CCNNGG | 3 cut(s) | 30, 45, 3069 |
| BseJI | GATNNNNATC | 1 cut(s) | 3719 |
| BseMI | GCAATG | 3 cut(s) | 333, 2375, 3693 |
| BseMII | CTCAG | 7 cut(s) | 1379, 2283, 2590, 2620, 2803, 3089, 3783 |
| BseNI | ACTGG | 5 cut(s) | 1908, 1918, 1953, 2219, 2502 |
| BseRI | GAGGAG | 6 cut(s) | 907, 1424, 2474, 2709, 3171, 3773 |
| BseSI | GKGCMC | 2 cut(s) | 2395, 3208 |
| BseYI | CCCAGC | 1 cut(s) | 3460 |
| Bsh1236I | CGCG | 3 cut(s) | 794, 2350, 3195 |
| BshFI | GGCC | 8 cut(s) | 414, 1701, 2044, 2085, 2393, 2958, 3217, 3778 |
| BshNI | GGYRCC | 1 cut(s) | 3073 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2500 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2405, 2456 |
| BsiSI | CCGG | 5 cut(s) | 289, 596, 620, 2642, 2996 |
| BslFI | GGGAC | 4 cut(s) | 1526, 1845, 2201, 2640 |
| BsmAI | GTCTC | 7 cut(s) | 83, 1874, 2459, 2894, 3253, 3528, 3650 |
| BsmBI | CGTCTC | 3 cut(s) | 1874, 2459, 3253 |
| BsmFI | GGGAC | 4 cut(s) | 1526, 1845, 2201, 2640 |
| BsmI | GAATGC | 4 cut(s) | 621, 1025, 3455, 3859 |
| BsnI | GGCC | 8 cut(s) | 414, 1701, 2044, 2085, 2393, 2958, 3217, 3778 |
| Bso31I | GGTCTC | 1 cut(s) | 2894 |
| BsoBI | CYCGRG | 2 cut(s) | 2405, 2456 |
| Bsp120I | GGGCCC | 1 cut(s) | 2391 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2395, 2500, 3208 |
| Bsp13I | TCCGGA | 1 cut(s) | 2995 |
| BspACI | CCGC | 5 cut(s) | 1783, 2550, 3195, 3325, 3765 |
| BspANI | GGCC | 8 cut(s) | 414, 1701, 2044, 2085, 2393, 2958, 3217, 3778 |
| BspCNI | CTCAG | 7 cut(s) | 1378, 2284, 2589, 2619, 2802, 3090, 3782 |
| BspEI | TCCGGA | 1 cut(s) | 2995 |
| BspFNI | CGCG | 3 cut(s) | 794, 2350, 3195 |
| BspHI | TCATGA | 1 cut(s) | 658 |
| BspLI | GGNNCC | 3 cut(s) | 1887, 2393, 3075 |
| BspMAI | CTGCAG | 1 cut(s) | 3401 |
| BspMI | ACCTGC | 1 cut(s) | 1722 |
| BspPI | GGATC | 6 cut(s) | 210, 863, 1342, 2296, 2341, 3453 |
| BspT107I | GGYRCC | 1 cut(s) | 3073 |
| BspTI | CTTAAG | 1 cut(s) | 736 |
| BspTNI | GGTCTC | 1 cut(s) | 2894 |
| BsrBI | CCGCTC | 1 cut(s) | 3765 |
| BsrDI | GCAATG | 3 cut(s) | 333, 2375, 3693 |
| BsrI | ACTGG | 5 cut(s) | 1908, 1918, 1953, 2219, 2502 |
| BssECI | CCNNGG | 3 cut(s) | 30, 45, 3069 |
| BssSI | CACGAG | 1 cut(s) | 3153 |
| BssT1I | CCWWGG | 2 cut(s) | 45, 3069 |
| Bst2BI | CACGAG | 1 cut(s) | 3153 |
| Bst4CI | ACNGT | 5 cut(s) | 1836, 2744, 3032, 3393, 3814 |
| Bst6I | CTCTTC | 6 cut(s) | 525, 810, 987, 1223, 1740, 3147 |
| BstAFI | CTTAAG | 1 cut(s) | 736 |
| BstBAI | YACGTR | 1 cut(s) | 1580 |
| BstC8I | GCNNGC | 6 cut(s) | 412, 1025, 1703, 2558, 2960, 3064 |
| BstFNI | CGCG | 3 cut(s) | 794, 2350, 3195 |
| BstH2I | RGCGCY | 2 cut(s) | 2423, 3231 |
| BstHHI | GCGC | 6 cut(s) | 1161, 2350, 2422, 2750, 3195, 3230 |
| BstMAI | GTCTC | 7 cut(s) | 83, 1874, 2459, 2894, 3253, 3528, 3650 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 224, 501, 1982, 2041, 2647, 3461, 3470 |
| BstNSI | RCATGY | 4 cut(s) | 1468, 2560, 3363, 3859 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2688, 2991 |
| BstSCI | CCNGG | 1 cut(s) | 619 |
| BstSFI | CTRYAG | 1 cut(s) | 3397 |
| BstSLI | GKGCMC | 2 cut(s) | 2395, 3208 |
| BstUI | CGCG | 3 cut(s) | 794, 2350, 3195 |
| BstV2I | GAAGAC | 3 cut(s) | 216, 638, 3639 |
| BstX2I | RGATCY | 6 cut(s) | 100, 202, 259, 868, 2288, 3445 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 879 |
| BstYI | RGATCY | 6 cut(s) | 100, 202, 259, 868, 2288, 3445 |
| BsuI | GTATCC | 1 cut(s) | 718 |
| BsuRI | GGCC | 8 cut(s) | 414, 1701, 2044, 2085, 2393, 2958, 3217, 3778 |
| BtgZI | GCGATG | 1 cut(s) | 519 |
| BtrI | CACGTC | 1 cut(s) | 2453 |
| BtsIMutI | CAGTG | 1 cut(s) | 2699 |
| BveI | ACCTGC | 1 cut(s) | 1722 |
| Cac8I | GCNNGC | 6 cut(s) | 412, 1025, 1703, 2558, 2960, 3064 |
| CciI | TCATGA | 1 cut(s) | 658 |
| CfoI | GCGC | 6 cut(s) | 1161, 2350, 2422, 2750, 3195, 3230 |
| Cfr13I | GGNCC | 5 cut(s) | 413, 1886, 2391, 2392, 3215 |
| CseI | GACGC | 2 cut(s) | 276, 800 |
| Csp6I | GTAC | 9 cut(s) | 470, 1559, 2075, 2222, 2740, 2863, 3028, 3033, 3074 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 700, 735 |
| CviQI | GTAC | 9 cut(s) | 470, 1559, 2075, 2222, 2740, 2863, 3028, 3033, 3074 |
| DraI | TTTAAA | 3 cut(s) | 1194, 1570, 1914 |
| DraIII | CACNNNGTG | 3 cut(s) | 1496, 2056, 2885 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2634 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1933 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2634 |
| EaeI | YGGCCR | 1 cut(s) | 3776 |
| Eam1104I | CTCTTC | 6 cut(s) | 525, 810, 987, 1223, 1740, 3147 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1933 |
| EarI | CTCTTC | 6 cut(s) | 525, 810, 987, 1223, 1740, 3147 |
| Eco130I | CCWWGG | 2 cut(s) | 45, 3069 |
| Eco147I | AGGCCT | 2 cut(s) | 2085, 2958 |
| Eco24I | GRGCYC | 1 cut(s) | 2395 |
| Eco31I | GGTCTC | 1 cut(s) | 2894 |
| Eco47I | GGWCC | 1 cut(s) | 1886 |
| Eco57I | CTGAAG | 1 cut(s) | 3683 |
| Eco88I | CYCGRG | 2 cut(s) | 2405, 2456 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1886 |
| EcoRI | GAATTC | 1 cut(s) | 71 |
| EcoT14I | CCWWGG | 2 cut(s) | 45, 3069 |
| EcoT22I | ATGCAT | 2 cut(s) | 3457, 3861 |
| EcoT38I | GRGCYC | 1 cut(s) | 2395 |
| ErhI | CCWWGG | 2 cut(s) | 45, 3069 |
| Esp3I | CGTCTC | 3 cut(s) | 1874, 2459, 3253 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 719, 751, 1328, 1360 |
| FaqI | GGGAC | 4 cut(s) | 1526, 1845, 2201, 2640 |
| FbaI | TGATCA | 1 cut(s) | 1773 |
| FblI | GTMKAC | 3 cut(s) | 156, 1123, 3364 |
| FriOI | GRGCYC | 1 cut(s) | 2395 |
| FspI | TGCGCA | 1 cut(s) | 2749 |
| GlaI | GCGC | 6 cut(s) | 1160, 2349, 2421, 2749, 3194, 3229 |
| GsaI | CCCAGC | 1 cut(s) | 3464 |
| GsuI | CTGGAG | 2 cut(s) | 475, 2879 |
| HaeII | RGCGCY | 2 cut(s) | 2423, 3231 |
| HaeIII | GGCC | 8 cut(s) | 414, 1701, 2044, 2085, 2393, 2958, 3217, 3778 |
| HapII | CCGG | 5 cut(s) | 289, 596, 620, 2642, 2996 |
| HgaI | GACGC | 2 cut(s) | 276, 800 |
| HhaI | GCGC | 6 cut(s) | 1161, 2350, 2422, 2750, 3195, 3230 |
| Hin6I | GCGC | 6 cut(s) | 1159, 2348, 2420, 2748, 3193, 3228 |
| HinP1I | GCGC | 6 cut(s) | 1159, 2348, 2420, 2748, 3193, 3228 |
| HincII | GTYRAC | 2 cut(s) | 157, 2706 |
| HindII | GTYRAC | 2 cut(s) | 157, 2706 |
| HindIII | AAGCTT | 1 cut(s) | 2033 |
| HpaI | GTTAAC | 1 cut(s) | 2706 |
| HpaII | CCGG | 5 cut(s) | 289, 596, 620, 2642, 2996 |
| Hpy166II | GTNNAC | 6 cut(s) | 157, 1124, 1839, 2706, 3020, 3365 |
| Hpy8I | GTNNAC | 6 cut(s) | 157, 1124, 1839, 2706, 3020, 3365 |
| Hpy99I | CGWCG | 1 cut(s) | 270 |
| HpyCH4III | ACNGT | 5 cut(s) | 1836, 2744, 3032, 3393, 3814 |
| HpyCH4IV | ACGT | 6 cut(s) | 1495, 1557, 1579, 2055, 2452, 2837 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 224, 501, 1982, 2041, 2647, 3461, 3470 |
| HpySE526I | ACGT | 6 cut(s) | 1495, 1557, 1579, 2055, 2452, 2837 |
| HspAI | GCGC | 6 cut(s) | 1159, 2348, 2420, 2748, 3193, 3228 |
| Kpn2I | TCCGGA | 1 cut(s) | 2995 |
| KpnI | GGTACC | 1 cut(s) | 3077 |
| Ksp22I | TGATCA | 1 cut(s) | 1773 |
| KspAI | GTTAAC | 1 cut(s) | 2706 |
| LmnI | GCTCC | 3 cut(s) | 861, 2461, 2503 |
| MaeII | ACGT | 6 cut(s) | 1495, 1557, 1579, 2055, 2452, 2837 |
| MbiI | CCGCTC | 1 cut(s) | 3765 |
| MfeI | CAATTG | 4 cut(s) | 1053, 1626, 3426, 3842 |
| MflI | RGATCY | 6 cut(s) | 100, 202, 259, 868, 2288, 3445 |
| MhlI | GDGCHC | 3 cut(s) | 2395, 2500, 3208 |
| MlsI | TGGCCA | 1 cut(s) | 3778 |
| MluNI | TGGCCA | 1 cut(s) | 3778 |
| MlyI | GAGTC | 4 cut(s) | 904, 1069, 2223, 3652 |
| MmeI | TCCRAC | 4 cut(s) | 219, 289, 1375, 2113 |
| Mox20I | TGGCCA | 1 cut(s) | 3778 |
| Mph1103I | ATGCAT | 2 cut(s) | 3457, 3861 |
| MroI | TCCGGA | 1 cut(s) | 2995 |
| MroXI | GAANNNNTTC | 6 cut(s) | 311, 395, 981, 1237, 1749, 3537 |
| MscI | TGGCCA | 1 cut(s) | 3778 |
| MslI | CAYNNNNRTG | 2 cut(s) | 576, 684 |
| Msp20I | TGGCCA | 1 cut(s) | 3778 |
| MspA1I | CMGCKG | 1 cut(s) | 112 |
| MspCI | CTTAAG | 1 cut(s) | 736 |
| MspI | CCGG | 5 cut(s) | 289, 596, 620, 2642, 2996 |
| MspR9I | CCNGG | 1 cut(s) | 621 |
| MssI | GTTTAAAC | 1 cut(s) | 1914 |
| MunI | CAATTG | 4 cut(s) | 1053, 1626, 3426, 3842 |
| Mva1269I | GAATGC | 4 cut(s) | 621, 1025, 3455, 3859 |
| MvnI | CGCG | 3 cut(s) | 794, 2350, 3195 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 224, 501, 1982, 2041, 2647, 3461, 3470 |
| NciI | CCSGG | 1 cut(s) | 621 |
| NlaIV | GGNNCC | 3 cut(s) | 1887, 2393, 3075 |
| NmeAIII | GCCGAG | 1 cut(s) | 55 |
| NmuCI | GTSAC | 7 cut(s) | 49, 940, 953, 2207, 2480, 2849, 3387 |
| NsbI | TGCGCA | 1 cut(s) | 2749 |
| NsiI | ATGCAT | 2 cut(s) | 3457, 3861 |
| NspI | RCATGY | 4 cut(s) | 1468, 2560, 3363, 3859 |
| PaeI | GCATGC | 1 cut(s) | 2560 |
| PaeR7I | CTCGAG | 2 cut(s) | 2405, 2456 |
| PagI | TCATGA | 1 cut(s) | 658 |
| PceI | AGGCCT | 2 cut(s) | 2085, 2958 |
| PciI | ACATGT | 1 cut(s) | 3359 |
| PctI | GAATGC | 4 cut(s) | 621, 1025, 3455, 3859 |
| PdmI | GAANNNNTTC | 6 cut(s) | 311, 395, 981, 1237, 1749, 3537 |
| PfeI | GAWTC | 9 cut(s) | 119, 662, 1211, 1434, 2119, 2668, 2785, 3488, 3784 |
| PflFI | GACNNNGTC | 1 cut(s) | 2213 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2056, 2225, 2969 |
| PleI | GAGTC | 4 cut(s) | 903, 1068, 2222, 3652 |
| PmeI | GTTTAAAC | 1 cut(s) | 1914 |
| PpsI | GAGTC | 4 cut(s) | 903, 1068, 2222, 3652 |
| Ppu21I | YACGTR | 1 cut(s) | 1580 |
| PpuMI | RGGWCCY | 1 cut(s) | 1886 |
| PscI | ACATGT | 1 cut(s) | 3359 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2688, 2991 |
| PshBI | ATTAAT | 1 cut(s) | 912 |
| PsiI | TTATAA | 1 cut(s) | 1710 |
| Psp5II | RGGWCCY | 1 cut(s) | 1886 |
| PspFI | CCCAGC | 1 cut(s) | 3460 |
| PspN4I | GGNNCC | 3 cut(s) | 1887, 2393, 3075 |
| PspOMI | GGGCCC | 1 cut(s) | 2391 |
| PspPI | GGNCC | 5 cut(s) | 413, 1886, 2391, 2392, 3215 |
| PspPPI | RGGWCCY | 1 cut(s) | 1886 |
| PspXI | VCTCGAGB | 1 cut(s) | 2405 |
| PstI | CTGCAG | 1 cut(s) | 3401 |
| PsuI | RGATCY | 6 cut(s) | 100, 202, 259, 868, 2288, 3445 |
| PsyI | GACNNNGTC | 1 cut(s) | 2213 |
| PvuII | CAGCTG | 1 cut(s) | 112 |
| RsaI | GTAC | 9 cut(s) | 471, 1560, 2076, 2223, 2741, 2864, 3029, 3034, 3075 |
| RsaNI | GTAC | 9 cut(s) | 470, 1559, 2075, 2222, 2740, 2863, 3028, 3033, 3074 |
| RseI | CAYNNNNRTG | 2 cut(s) | 576, 684 |
| SalI | GTCGAC | 1 cut(s) | 155 |
| Sau96I | GGNCC | 5 cut(s) | 413, 1886, 2391, 2392, 3215 |
| ScaI | AGTACT | 3 cut(s) | 2223, 2741, 3029 |
| SchI | GAGTC | 4 cut(s) | 904, 1069, 2223, 3652 |
| ScrFI | CCNGG | 1 cut(s) | 621 |
| SduI | GDGCHC | 3 cut(s) | 2395, 2500, 3208 |
| SfcI | CTRYAG | 1 cut(s) | 3397 |
| Sfr274I | CTCGAG | 2 cut(s) | 2405, 2456 |
| SinI | GGWCC | 1 cut(s) | 1886 |
| SlaI | CTCGAG | 2 cut(s) | 2405, 2456 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 576, 684 |
| SpeI | ACTAGT | 1 cut(s) | 1129 |
| SphI | GCATGC | 1 cut(s) | 2560 |
| SseBI | AGGCCT | 2 cut(s) | 2085, 2958 |
| SsiI | CCGC | 5 cut(s) | 1783, 2550, 3195, 3325, 3765 |
| SspI | AATATT | 1 cut(s) | 133 |
| StuI | AGGCCT | 2 cut(s) | 2085, 2958 |
| StyD4I | CCNGG | 1 cut(s) | 619 |
| StyI | CCWWGG | 2 cut(s) | 45, 3069 |
| TaaI | ACNGT | 5 cut(s) | 1836, 2744, 3032, 3393, 3814 |
| TaiI | ACGT | 6 cut(s) | 1498, 1560, 1582, 2058, 2455, 2840 |
| TatI | WGTACW | 5 cut(s) | 2074, 2221, 2739, 2862, 3027 |
| TauI | GCSGC | 2 cut(s) | 1786, 3768 |
| TfiI | GAWTC | 9 cut(s) | 119, 662, 1211, 1434, 2119, 2668, 2785, 3488, 3784 |
| TscAI | CASTG | 1 cut(s) | 2699 |
| TseFI | GTSAC | 7 cut(s) | 49, 940, 953, 2207, 2480, 2849, 3387 |
| Tsp45I | GTSAC | 7 cut(s) | 49, 940, 953, 2207, 2480, 2849, 3387 |
| TspGWI | ACGGA | 2 cut(s) | 2226, 3164 |
| TspRI | CASTG | 1 cut(s) | 2699 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2213 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2056, 2225, 2969 |
| Vha464I | CTTAAG | 1 cut(s) | 736 |
| VpaK11BI | GGWCC | 1 cut(s) | 1886 |
| VspI | ATTAAT | 1 cut(s) | 912 |
| XbaI | TCTAGA | 2 cut(s) | 3286, 3739 |
| XceI | RCATGY | 4 cut(s) | 1468, 2560, 3363, 3859 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 235 |
| XhoI | CTCGAG | 2 cut(s) | 2405, 2456 |
| XmiI | GTMKAC | 3 cut(s) | 156, 1123, 3364 |
| XmnI | GAANNNNTTC | 6 cut(s) | 311, 395, 981, 1237, 1749, 3537 |
| ZrmI | AGTACT | 3 cut(s) | 2223, 2741, 3029 |
| Zsp2I | ATGCAT | 2 cut(s) | 3457, 3861 |