pycom11g04580

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
3536253 .. 3538226
1974 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04580.1

Sequence Viewer

Length: 1974 bp
ATGTCAATCTTGAAGTTGAGTTTTGACAACTTAGGATCATCATCATTAAAGCAATGTTTTGCATATTGCTCAATGTTTGAGAATGATTCAAAAATTCAAAGAAATAGCTTGGTTCAACTTTGGATGGCTCAAGGACTACTCCACCCTTCGCCTGGTGAAAGTAAAGATATGAAGATCAAAGGCAATGACTCACCTGGTGAAAGTAAAAATACGGAGGACATAGGCAATGAATATTTTGATATTCTATTGCAGAGCTCCTTATTTCAAGATGCTATAATGGATGATTATGGCATTGTTCAGGAATGCAAGATGCACGATCTTGTGCATGATCTTGCAGAACTTGTATACAAATCCGAAAGCTTGACAAGTGACTTAAGTGTCATAGATAATACACTTGAGGTTCGACATGTTGCTTGGGTTTCTACTTCTAAACTAGAAACAATTCCAAAAAAAAGTGCTGGAAAATTGCGGTCATTGTTTTTGGACAACGATGAAGTTCCTGCTAACATTCATCTACGGTTCAAAGCTTTACGTGTCTTAAAATTTAGTAATATTGAAGAATTTCCAGATTCAATTGGTAGGTTGAAACATTTGAGGTATCTTGACATTTCCAAAACATTCTTTGAAGCACTCCCCAAGTCTATAGGCAAGCTCTATAACCTTCAGACGTTAAGAGCAACTAAATGTGCCCTTAAAGAGTTTCCAAAAGAACTACTAAACTTGATCAACCTAAGGCATATTCATTTTGGTGAGAGAACGAAACTCCCACAAGGGATAAGGCAGTTGACTTGCCTTCAAACATTATCTTACTTTTCAGTGGATAATGAGATTGGTCGTCAAATCGAAGAGTTGGCTAGCTTGAATCAATTGAGAGGTGAATTAATCATTTGTGATCTGGAGCATGTAGGGAACAGAGAAGAAGCAGAGAAAGCTAAGTTAGAGGAAAAGACGAAAATATGCCATTTGACATTCCAATGGACGAGATATAGGTTAATAACTGACAACAATAAGGACAACGATGTATTGGAAGGCTTACGACCGCATCCTAAGTTACAGAGCTTAAGTATTGTAAACTTCATGGGCGATAAGTTTCCATCGTGGATGATAAGTGGCTCACTATTGTTTGAGAATTTGAGGAAGATTATGTTACGTGGATGCAACAAATGTGACGAGATCCCACCGCTCGGTCATCTACGCAATCTTACGAAGCTTAGTATTATCGGAATGGCTAACTTGAAATATGTTGGTGCTGAGTTATGTAGTTCTCTTGAAAGATTGCTTATTGAAAATTGTCGAAAGCTAAGGCATTTGCCGGATGGGCTACACGCATTCTTTCTCCTTAAGTACATGGATATATCAGAATGTTCTACTCTAGAGTTGATTCCAATTACACAGGGCCTTAAGTACATGCATATATCAAAATGTCCTAGTCTAAAGTCGATTCTGATTACACAGGACATGACATCTCTACAAACATTAAAGATTGAAGATTGTGAAAGATTGTCAGGCCTACCGAGTGGGTTAGACTACTGCACCTCTCTTCGCGAGTTGGATATTTCAGAATGCCATGGATTATCTGCCCCATTGAGTATATGTACCTCTCTTGTGGAATTGAGTGTACAACAATGCGATAATCTGACATCAATTGAAATTAAAGGCGGCGTGTCCCTCACCTCCTCTAATGTACTTGGATCTTGTTGTTCTCTTATGAGAATAATTGTTCGTATTTGTAGAAAGCTGAGACATTTGTTCGATGGGCTAGACACACTCTATCTCCTTGAGGAACTGACTATTAAGGGATGTCCTAGTCTAGAGTTGATTCCAATTCAACAGGGCATGGCATCTCTACAGAAATTAGAGATTGAAGATTGTGAACGATTGTCACGCCTGCCGAGTGGGTTAAAGAACTGCACCTCTCTTCAGGAATTGAGTATAAAGGAATGCGATGGATTATCAGGCCCATTGAGTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

658

Amino Acids

74.21

Weight (kDa)

6.23

Isoelectric Point (pI)

52.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 25 - 112 1e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 156 - 406 1.7e-33 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 281 - 409 2e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 377
AccBSI CCGCTC 1 cut(s) 1183
AccI GTMKAC 1 cut(s) 345
AccII CGCG 1 cut(s) 1545
AciI CCGC 4 cut(s) 469, 1040, 1181, 1659
AclWI GGATC 3 cut(s) 43, 1168, 1699
AcsI RAATTY 4 cut(s) 93, 542, 560, 1129
AcuI CTGAAG 2 cut(s) 647, 1904
AdeI CACNNNGTG 1 cut(s) 197
AfaI GTAC 5 cut(s) 1346, 1406, 1597, 1620, 1686
AfiI CCNNNNNNNGG 2 cut(s) 152, 1184
AflII CTTAAG 4 cut(s) 373, 1060, 1340, 1400
AflIII ACRYGT 2 cut(s) 406, 532
AjnI CCWGG 2 cut(s) 151, 193
Alw21I GWGCWC 1 cut(s) 257
Alw26I GTCTC 1 cut(s) 1735
AlwI GGATC 3 cut(s) 43, 1168, 1699
AoxI GGCC 3 cut(s) 1396, 1507, 1957
ApoI RAATTY 4 cut(s) 93, 542, 560, 1129
AseI ATTAAT 1 cut(s) 881
Asp700I GAANNNNTTC 2 cut(s) 441, 561
AspS9I GGNCC 2 cut(s) 1396, 1958
AsuHPI GGTGA 6 cut(s) 167, 183, 209, 761, 887, 1663
AsuNHI GCTAGC 1 cut(s) 854
AxyI CCTNAGG 1 cut(s) 731
BaeGI GKGCMC 1 cut(s) 691
BanII GRGCYC 1 cut(s) 257
Bbv12I GWGCWC 1 cut(s) 257
BccI CCATC 5 cut(s) 118, 1102, 1310, 1748, 1940
BciT130I CCWGG 2 cut(s) 153, 195
BclI TGATCA 1 cut(s) 723
BcoDI GTCTC 1 cut(s) 1735
BfaI CTAG 7 cut(s) 434, 855, 1373, 1428, 1760, 1806, 1811
BfmI CTRYAG 2 cut(s) 642, 1847
BfrI CTTAAG 4 cut(s) 373, 1060, 1340, 1400
BglI GCCNNNNNGGC 1 cut(s) 1318
BisI GCNGC 1 cut(s) 1660
BlsI GCNGC 1 cut(s) 1661
Bme1390I CCNGG 2 cut(s) 153, 195
BmgT120I GGNCC 2 cut(s) 1396, 1958
BmrFI CCNGG 2 cut(s) 153, 195
BmsI GCATC 5 cut(s) 259, 300, 1051, 1145, 1850
BmtI GCTAGC 1 cut(s) 858
BpmI CTGGAG 1 cut(s) 917
Bpu10I CCTNAGC 1 cut(s) 1301
BpuEI CTTGAG 3 cut(s) 114, 416, 1799
BsaAI YACGTR 2 cut(s) 533, 1151
BsaBI GATNNNNATC 1 cut(s) 40
BsaJI CCNNGG 1 cut(s) 1567
BsaXI ACNNNNNCTCC 2 cut(s) 1758, 1788
Bsc4I CCNNNNNNNGG 2 cut(s) 152, 1184
Bse21I CCTNAGG 1 cut(s) 731
Bse3DI GCAATG 3 cut(s) 59, 190, 232
Bse8I GATNNNNATC 1 cut(s) 40
BseBI CCWGG 2 cut(s) 153, 195
BseDI CCNNGG 1 cut(s) 1567
BseGI GGATG 7 cut(s) 129, 286, 1042, 1107, 1160, 1321, 1805
BseJI GATNNNNATC 1 cut(s) 40
BseLI CCNNNNNNNGG 2 cut(s) 152, 1184
BseMI GCAATG 3 cut(s) 59, 190, 232
BseMII CTCAG 2 cut(s) 1242, 1730
BseRI GAGGAG 1 cut(s) 1666
BseSI GKGCMC 1 cut(s) 691
BsgI GTGCAG 2 cut(s) 1516, 1894
Bsh1236I CGCG 1 cut(s) 1545
Bsh1285I CGRYCG 1 cut(s) 1040
BshFI GGCC 3 cut(s) 1398, 1509, 1959
BsiEI CGRYCG 1 cut(s) 1040
BsiHKAI GWGCWC 1 cut(s) 257
BsiSI CCGG 1 cut(s) 1313
BslFI GGGAC 1 cut(s) 1651
BslI CCNNNNNNNGG 2 cut(s) 152, 1184
BsmAI GTCTC 1 cut(s) 1735
BsmFI GGGAC 1 cut(s) 1651
BsmI GAATGC 4 cut(s) 308, 1328, 1568, 1946
BsnI GGCC 3 cut(s) 1398, 1509, 1959
Bsp1286I GDGCHC 2 cut(s) 257, 691
Bsp1407I TGTACA 1 cut(s) 1618
Bsp143I GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
Bsp19I CCATGG 1 cut(s) 1567
Bsp68I TCGCGA 1 cut(s) 1545
BspACI CCGC 4 cut(s) 469, 1040, 1181, 1659
BspANI GGCC 3 cut(s) 1398, 1509, 1959
BspCNI CTCAG 2 cut(s) 1243, 1731
BspFNI CGCG 1 cut(s) 1545
BspOI GCTAGC 1 cut(s) 858
BspPI GGATC 3 cut(s) 43, 1168, 1699
BspTI CTTAAG 4 cut(s) 373, 1060, 1340, 1400
BsrBI CCGCTC 1 cut(s) 1183
BsrDI GCAATG 3 cut(s) 59, 190, 232
BsrGI TGTACA 1 cut(s) 1618
BssECI CCNNGG 1 cut(s) 1567
BssMI GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
BssNAI GTATAC 1 cut(s) 346
BssT1I CCWWGG 1 cut(s) 1567
Bst1107I GTATAC 1 cut(s) 346
Bst2UI CCWGG 2 cut(s) 153, 195
Bst4CI ACNGT 1 cut(s) 519
Bst6I CTCTTC 3 cut(s) 840, 1545, 1923
BstAFI CTTAAG 4 cut(s) 373, 1060, 1340, 1400
BstAUI TGTACA 1 cut(s) 1618
BstBAI YACGTR 2 cut(s) 533, 1151
BstC8I GCNNGC 3 cut(s) 650, 856, 1889
BstDEI CTNAG 8 cut(s) 31, 731, 933, 1047, 1211, 1251, 1301, 1739
BstDSI CCRYGG 1 cut(s) 1567
BstF5I GGATG 7 cut(s) 129, 286, 1042, 1107, 1160, 1321, 1805
BstFNI CGCG 1 cut(s) 1545
BstKTI GATC 8 cut(s) 38, 177, 319, 331, 726, 895, 1176, 1694
BstMAI GTCTC 1 cut(s) 1735
BstMBI GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
BstMCI CGRYCG 1 cut(s) 1040
BstMWI GCNNNNNNNGC 2 cut(s) 929, 1318
BstNI CCWGG 2 cut(s) 153, 195
BstNSI RCATGY 3 cut(s) 410, 905, 1411
BstSCI CCNGG 2 cut(s) 151, 193
BstSFI CTRYAG 2 cut(s) 642, 1847
BstSLI GKGCMC 1 cut(s) 691
BstUI CGCG 1 cut(s) 1545
BstX2I RGATCY 2 cut(s) 1173, 1691
BstYI RGATCY 2 cut(s) 1173, 1691
BstZ17I GTATAC 1 cut(s) 346
Bsu36I CCTNAGG 1 cut(s) 731
BsuRI GGCC 3 cut(s) 1398, 1509, 1959
BtgI CCRYGG 1 cut(s) 1567
BtgZI GCGATG 1 cut(s) 1959
BtsCI GGATG 7 cut(s) 129, 286, 1042, 1107, 1160, 1321, 1805
BtsIMutI CAGTG 1 cut(s) 822
BtuMI TCGCGA 1 cut(s) 1545
Cac8I GCNNGC 3 cut(s) 650, 856, 1889
Cfr13I GGNCC 2 cut(s) 1396, 1958
CsiI ACCWGGT 1 cut(s) 193
Csp6I GTAC 5 cut(s) 1345, 1405, 1596, 1619, 1685
CviAII CATG 9 cut(s) 326, 407, 902, 1078, 1348, 1408, 1459, 1568, 1837
CviQI GTAC 5 cut(s) 1345, 1405, 1596, 1619, 1685
DdeI CTNAG 8 cut(s) 31, 731, 933, 1047, 1211, 1251, 1301, 1739
DpnI GATC 8 cut(s) 37, 176, 318, 330, 725, 894, 1175, 1693
DpnII GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
DraIII CACNNNGTG 1 cut(s) 197
DrdI GACNNNNNNGTC 1 cut(s) 377
DseDI GACNNNNNNGTC 1 cut(s) 377
Eam1104I CTCTTC 3 cut(s) 840, 1545, 1923
EarI CTCTTC 3 cut(s) 840, 1545, 1923
Ecl136II GAGCTC 1 cut(s) 255
Eco130I CCWWGG 1 cut(s) 1567
Eco147I AGGCCT 1 cut(s) 1509
Eco24I GRGCYC 1 cut(s) 257
Eco53kI GAGCTC 1 cut(s) 255
Eco57I CTGAAG 2 cut(s) 647, 1904
Eco81I CCTNAGG 1 cut(s) 731
EcoICRI GAGCTC 1 cut(s) 255
EcoO109I RGGNCCY 1 cut(s) 1396
EcoRII CCWGG 2 cut(s) 151, 193
EcoT14I CCWWGG 1 cut(s) 1567
EcoT22I ATGCAT 1 cut(s) 1413
EcoT38I GRGCYC 1 cut(s) 257
ErhI CCWWGG 1 cut(s) 1567
FaeI CATG 9 cut(s) 329, 410, 905, 1081, 1351, 1411, 1462, 1571, 1840
FaqI GGGAC 1 cut(s) 1651
FatI CATG 9 cut(s) 325, 406, 901, 1077, 1347, 1407, 1458, 1567, 1836
FbaI TGATCA 1 cut(s) 723
FblI GTMKAC 1 cut(s) 345
Fnu4HI GCNGC 1 cut(s) 1660
FokI GGATG 7 cut(s) 136, 293, 1029, 1114, 1167, 1328, 1812
FriOI GRGCYC 1 cut(s) 257
Fsp4HI GCNGC 1 cut(s) 1660
FspBI CTAG 7 cut(s) 434, 855, 1373, 1428, 1760, 1806, 1811
GluI GCNGC 1 cut(s) 1660
GsuI CTGGAG 1 cut(s) 917
HaeIII GGCC 3 cut(s) 1398, 1509, 1959
HapII CCGG 1 cut(s) 1313
Hin1II CATG 9 cut(s) 329, 410, 905, 1081, 1351, 1411, 1462, 1571, 1840
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HindIII AAGCTT 3 cut(s) 358, 525, 1208
HinfI GANTC 7 cut(s) 86, 188, 569, 862, 1381, 1441, 1819
HpaII CCGG 1 cut(s) 1313
HphI GGTGA 6 cut(s) 167, 183, 209, 761, 887, 1663
Hpy166II GTNNAC 5 cut(s) 346, 786, 1072, 1619, 1874
Hpy188I TCNGA 7 cut(s) 355, 666, 1223, 1360, 1446, 1561, 1638
Hpy8I GTNNAC 5 cut(s) 346, 786, 1072, 1619, 1874
HpyAV CCTTC 4 cut(s) 156, 671, 803, 1022
HpyCH4III ACNGT 1 cut(s) 519
HpyCH4IV ACGT 3 cut(s) 532, 668, 1150
HpyF10VI GCNNNNNNNGC 2 cut(s) 929, 1318
HpyF3I CTNAG 8 cut(s) 31, 731, 933, 1047, 1211, 1251, 1301, 1739
HpySE526I ACGT 3 cut(s) 532, 668, 1150
Hsp92II CATG 9 cut(s) 329, 410, 905, 1081, 1351, 1411, 1462, 1571, 1840
Ksp22I TGATCA 1 cut(s) 723
Kzo9I GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
LmnI GCTCC 2 cut(s) 260, 898
LweI GCATC 5 cut(s) 259, 300, 1051, 1145, 1850
MabI ACCWGGT 1 cut(s) 193
MaeI CTAG 7 cut(s) 434, 855, 1373, 1428, 1760, 1806, 1811
MaeII ACGT 3 cut(s) 532, 668, 1150
MaeIII GTNAC 5 cut(s) 368, 1050, 1146, 1166, 1881
MalI GATC 8 cut(s) 37, 176, 318, 330, 725, 894, 1175, 1693
MbiI CCGCTC 1 cut(s) 1183
MboI GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
MboII GAAGA 9 cut(s) 184, 569, 857, 929, 1150, 1499, 1532, 1877, 1910
MfeI CAATTG 3 cut(s) 573, 866, 1644
MflI RGATCY 2 cut(s) 1173, 1691
MhlI GDGCHC 2 cut(s) 257, 691
MlyI GAGTC 1 cut(s) 182
MmeI TCCRAC 1 cut(s) 1530
Mph1103I ATGCAT 1 cut(s) 1413
MroXI GAANNNNTTC 2 cut(s) 441, 561
MslI CAYNNNNRTG 2 cut(s) 747, 973
MspCI CTTAAG 4 cut(s) 373, 1060, 1340, 1400
MspI CCGG 1 cut(s) 1313
MspR9I CCNGG 2 cut(s) 153, 195
MunI CAATTG 3 cut(s) 573, 866, 1644
Mva1269I GAATGC 4 cut(s) 308, 1328, 1568, 1946
MvaI CCWGG 2 cut(s) 153, 195
MvnI CGCG 1 cut(s) 1545
MwoI GCNNNNNNNGC 2 cut(s) 929, 1318
NcoI CCATGG 1 cut(s) 1567
NdeII GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
NheI GCTAGC 1 cut(s) 854
NlaIII CATG 9 cut(s) 329, 410, 905, 1081, 1351, 1411, 1462, 1571, 1840
NmeAIII GCCGAG 1 cut(s) 1917
NmuCI GTSAC 3 cut(s) 368, 1166, 1881
NruI TCGCGA 1 cut(s) 1545
NsiI ATGCAT 1 cut(s) 1413
NspI RCATGY 3 cut(s) 410, 905, 1411
PceI AGGCCT 1 cut(s) 1509
PciI ACATGT 1 cut(s) 406
PctI GAATGC 4 cut(s) 308, 1328, 1568, 1946
PdmI GAANNNNTTC 2 cut(s) 441, 561
PfeI GAWTC 6 cut(s) 86, 569, 862, 1381, 1441, 1819
PkrI GCNGC 1 cut(s) 1661
PleI GAGTC 1 cut(s) 182
PpsI GAGTC 1 cut(s) 182
Ppu21I YACGTR 2 cut(s) 533, 1151
PscI ACATGT 1 cut(s) 406
PshBI ATTAAT 1 cut(s) 881
Psp124BI GAGCTC 1 cut(s) 257
Psp6I CCWGG 2 cut(s) 151, 193
PspGI CCWGG 2 cut(s) 151, 193
PspPI GGNCC 2 cut(s) 1396, 1958
PsuI RGATCY 2 cut(s) 1173, 1691
RruI TCGCGA 1 cut(s) 1545
RsaI GTAC 5 cut(s) 1346, 1406, 1597, 1620, 1686
RsaNI GTAC 5 cut(s) 1345, 1405, 1596, 1619, 1685
RseI CAYNNNNRTG 2 cut(s) 747, 973
SacI GAGCTC 1 cut(s) 257
SatI GCNGC 1 cut(s) 1660
Sau3AI GATC 8 cut(s) 35, 174, 316, 328, 723, 892, 1173, 1691
Sau96I GGNCC 2 cut(s) 1396, 1958
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 2 cut(s) 153, 195
SduI GDGCHC 2 cut(s) 257, 691
SexAI ACCWGGT 1 cut(s) 193
SfaNI GCATC 5 cut(s) 259, 300, 1051, 1145, 1850
SfcI CTRYAG 2 cut(s) 642, 1847
SmiMI CAYNNNNRTG 2 cut(s) 747, 973
SmlI CTYRAG 7 cut(s) 129, 373, 395, 1060, 1340, 1400, 1778
SmoI CTYRAG 7 cut(s) 129, 373, 395, 1060, 1340, 1400, 1778
SseBI AGGCCT 1 cut(s) 1509
SsiI CCGC 4 cut(s) 469, 1040, 1181, 1659
SspI AATATT 2 cut(s) 233, 553
SspMI CTAG 7 cut(s) 434, 855, 1373, 1428, 1760, 1806, 1811
SstI GAGCTC 1 cut(s) 257
StuI AGGCCT 1 cut(s) 1509
StyD4I CCNGG 2 cut(s) 151, 193
StyI CCWWGG 1 cut(s) 1567
TaaI ACNGT 1 cut(s) 519
TaiI ACGT 3 cut(s) 535, 671, 1153
TaqI TCGA 5 cut(s) 403, 843, 1294, 1439, 1752
TaqII GACCGA 1 cut(s) 1175
TatI WGTACW 4 cut(s) 1344, 1404, 1618, 1684
TauI GCSGC 1 cut(s) 1662
TfiI GAWTC 6 cut(s) 86, 569, 862, 1381, 1441, 1819
TscAI CASTG 1 cut(s) 822
TseFI GTSAC 3 cut(s) 368, 1166, 1881
Tsp45I GTSAC 3 cut(s) 368, 1166, 1881
TspDTI ATGAA 6 cut(s) 185, 243, 500, 507, 731, 1066
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 1 cut(s) 822
Vha464I CTTAAG 4 cut(s) 373, 1060, 1340, 1400
VspI ATTAAT 1 cut(s) 881
XapI RAATTY 4 cut(s) 93, 542, 560, 1129
XbaI TCTAGA 2 cut(s) 1372, 1810
XceI RCATGY 3 cut(s) 410, 905, 1411
XcmI CCANNNNNNNNNTGG 1 cut(s) 149
XmiI GTMKAC 1 cut(s) 345
XmnI GAANNNNTTC 2 cut(s) 441, 561
XspI CTAG 7 cut(s) 434, 855, 1373, 1428, 1760, 1806, 1811
Zsp2I ATGCAT 1 cut(s) 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.