Rroxscaffold_6G00412790

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
35286993 .. 35295446
8454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00412790.1

Sequence Viewer

Length: 2250 bp
ATGCACGATCTTGTGCATGATGTTGCAGAACGTGTATCAAAGTCTTGGCAGGAAAGAGGTCGCTCATTTGTTGGCGATCAAGTCTTTCTACCAAGCTTTCAAACTTTGCGAGTCTTAGGATTATACGGGCCAAATATCAAGGAGTTGCCAGTTTCAATTGGAAAAATGAAACACTTGAGGTATCTGGATATTTCTGATACAAGGATTACAACACTCCCCAAATCTATTGGCAAGCTTTATAACCTACAGACTTTGAAAATGGAAGGTCTCCGCTTGAAAGAGCTTCCAAAGGAATTGCTCAATTTGATCAATTTGAGACATATTTGTCCTATTAGATCAAGCGTATATCTTTCACAGCAGTTTCCATGGCCAGCTGGGATGGGGCGATTGACTAACCTTCAATCATTACCTTATTTTACGGTGCGTAAGGAGATAGGTTGGGGAATCGAGGAACTGGGCGGCTTGAAACAATTGAAAGGTGGATTAACTATTTATCATCTGGAACATGTGAGAGATAGAGAAGCAGCTAAGAAAGCAAATCTAGTGGGGAAGCGTATACGTGATTTAAGCTTTAGTTGGTCGAGTAACGAACACCGGGCAAGCAGCAGCAGCAGCATTGATGAGGATGTACTGGAAGCACTTCAACCACACCCTAATTTGAAATTCTTAAAGATTGAAAACTTCATGGGTGATAAATTTCCTTCATGGATGATGAGCAAGTTGTCTCTACCCAGAAATTTGGAAGAGATCACATTTGGGGGCTGCAACAAATGTGAAGGAGTCCCAAAACTTGGCCATCTGCCTAATCTTAGATCTCTTCTCATGGACAACATGTCAAACCTGAAGTGTCTAGGATCTGACTTTTACGGTTACGATCCCCATGAGGCTACGACAGGTTCTCAGACGAAGGCTCTGTTTCCTGCATTGGAGAGTTTGCATATTAAAAACGCCAAGAAGCTAATCGAATGGAGTGAACCACAAGTATTGTTGCCAACAGAGGTGTTTCCACGTCTTCAGGAGCTTATTCTGTGGGATTGTCACAAGTTAACAAGTGCTCCCAGTTATTTTCCATCTCTTCAGAAGCTGAGTGTGATTAGAATGGATAGCGGTGTACCGGTAACAAGTATTCTTAGCAAACTGACCACTCTCACTTATCTCGATCTTGAATGGGCGGGAGGAGTTAACTGCCTGCCGGACGGGATGTTAAGGAAGAACAAGAATCTTGCAGTTTTGGGGCTACATCGTTGTTTGGAGTTAACTTGTATTGCTCCCCATGGATTTGGTTGTTGCACTTCTCTTCAGTCACTGCATATTTCATACTGTCCTAAACTGAGGTATTTACCTGAGGGGATACTAGCACCATCTCTAAAGAGGTTGATTATAACGGCCTGCGACAGTCTGGAGTCCATCCCATTTACGGAGGGGATAGAATACAGCAGTCTCGAAACCTTGCTAATCAGGGAATGCATCATAACGTCCATTCCAATTTCTCAGGGCTTGCCATCCCTTCGTGTACTAAAGATTGTGCGTTGTCCTAAACTGAGGTATTTACCTGAGGGGCTACTAGCACCGTCTCTAAAGAAGTTGGATATAACGGCCTGCGACAGTCTGGAGTCCATCCCATTTACGGAGGGGATAGAATACAGCAGTCTTGAAACCTTGACAATCAGGGAATGCAACATAACGTCCATTCCAATTTCACAGGGCTTGCCCCTTCGTGTACTAGAGATTTTGCATTGTCCTAAACTATCGAGCGTCCCAAGTGGACTAAACTGCTGCACCTCTCTGGAGAAGTTGGAGATAATAAACTGCCCCAGTCTGGAGACAATTCCATATTTAGCATCCCTCACCAGCTTGAAGATATTGAACATCGGTGCCTTCTGCGAGCTCGATTCATTCCCTGCTATACCGGTCATGCCACAACTTGAGGAACTAAGGCTGGAAGGCTGGCCTAAGCTCAACTCTCTGCCTGAACAGATTCAACACTTCACTTCTCTCACATCTTTGACTATATGCTCCTTCGACCATGTGGAGGAAATTCCAGACTGGTTTGGAAACTTCTCTTCTCTTGACTGCCTCACCATAGAGAGCTGCCAAAATCTAAAGAAACTTCCGTCACTCCAAGCTATGCAATGCCTCACAAAGTTAAGGTTCTTGTTCATCTATGCCTCCCCTATAATTGAAAGATGCAGGAAGGGCGGCCCAGAGTGGCCCAAGATTTCTCATATTCCAGATGTCTGTCTGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

749

Amino Acids

84.14

Weight (kDa)

7.69

Isoelectric Point (pI)

60.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 29 - 341 6.9e-30 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 149 - 278 2.2e-34 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 429 - 560 7.8e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 484 - 626 7e-08 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 658 - 718 2.4e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 240, 1382
AasI GACNNNNNNGTC 1 cut(s) 324
AccB1I GGYRCC 1 cut(s) 1874
AccB7I CCANNNNNTGG 1 cut(s) 791
AccI GTMKAC 1 cut(s) 556
AciI CCGC 5 cut(s) 271, 459, 1107, 1172, 2199
AclWI GGATC 2 cut(s) 862, 869
AcoI YGGCCR 2 cut(s) 368, 793
AcsI RAATTY 4 cut(s) 662, 695, 736, 2037
AcuI CTGAAG 4 cut(s) 863, 998, 1061, 1283
AfaI GTAC 4 cut(s) 630, 1113, 1515, 1722
AfiI CCNNNNNNNGG 5 cut(s) 791, 1417, 1627, 1819, 2032
AflIII ACRYGT 3 cut(s) 31, 505, 831
AgeI ACCGGT 2 cut(s) 1114, 1909
AhdI GACNNNNNGTC 1 cut(s) 832
AjiI CACGTC 1 cut(s) 1010
Alw21I GWGCWC 2 cut(s) 1057, 1890
Alw26I GTCTC 6 cut(s) 272, 310, 729, 1445, 1578, 1817
AlwI GGATC 2 cut(s) 862, 869
AlwNI CAGNNNCTG 2 cut(s) 1084, 1306
AoxI GGCC 8 cut(s) 128, 368, 793, 1386, 1596, 1949, 2200, 2210
ApeKI GCWGC 8 cut(s) 524, 603, 606, 609, 612, 762, 1776, 2091
ApoI RAATTY 4 cut(s) 662, 695, 736, 2037
AsiGI ACCGGT 2 cut(s) 1114, 1909
Asp700I GAANNNNTTC 2 cut(s) 639, 1977
AspS9I GGNCC 3 cut(s) 128, 2201, 2211
AsuC2I CCSGG 1 cut(s) 596
AsuHPI GGTGA 3 cut(s) 701, 1840, 2071
AxyI CCTNAGG 2 cut(s) 1344, 1554
BalI TGGCCA 2 cut(s) 370, 795
BanI GGYRCC 1 cut(s) 1874
BanII GRGCYC 1 cut(s) 1890
BbsI GAAGAC 1 cut(s) 1004
Bbv12I GWGCWC 2 cut(s) 1057, 1890
BbvI GCAGC 8 cut(s) 536, 615, 618, 621, 624, 749, 1763, 2078
BccI CCATC 7 cut(s) 373, 804, 1078, 1369, 1415, 1510, 1625
BceAI ACGGC 2 cut(s) 1401, 1611
BciVI GTATCC 1 cut(s) 1344
BclI TGATCA 1 cut(s) 306
BcnI CCSGG 1 cut(s) 596
BcoDI GTCTC 6 cut(s) 272, 310, 729, 1445, 1578, 1817
BfaI CTAG 5 cut(s) 542, 851, 1355, 1565, 1724
BfmI CTRYAG 1 cut(s) 245
BfuI GTATCC 1 cut(s) 1344
BglII AGATCT 1 cut(s) 812
Bme1390I CCNGG 1 cut(s) 596
BmeRI GACNNNNNGTC 1 cut(s) 832
BmgBI CACGTC 1 cut(s) 1010
BmgT120I GGNCC 3 cut(s) 128, 2201, 2211
BmiI GGNNCC 1 cut(s) 1876
BmrFI CCNGG 1 cut(s) 596
BmrI ACTGGG 3 cut(s) 464, 1053, 1809
BmsI GCATC 3 cut(s) 1476, 1850, 2177
BmuI ACTGGG 3 cut(s) 464, 1053, 1809
BpiI GAAGAC 1 cut(s) 1004
BpmI CTGGAG 4 cut(s) 1421, 1631, 1808, 1841
Bpu10I CCTNAGC 1 cut(s) 1953
BpuEI CTTGAG 2 cut(s) 196, 1946
BpuMI CCSGG 1 cut(s) 596
BsaAI YACGTR 1 cut(s) 560
BsaI GGTCTC 1 cut(s) 272
BsaJI CCNNGG 2 cut(s) 365, 1273
BsaWI WCCGGW 2 cut(s) 1114, 1909
BsaXI ACNNNNNCTCC 2 cut(s) 1039, 1069
Bsc4I CCNNNNNNNGG 5 cut(s) 791, 1417, 1627, 1819, 2032
Bse118I RCCGGY 2 cut(s) 1114, 1909
Bse1I ACTGG 6 cut(s) 149, 459, 636, 1059, 1815, 2051
Bse21I CCTNAGG 2 cut(s) 1344, 1554
Bse3DI GCAATG 1 cut(s) 2138
BseDI CCNNGG 2 cut(s) 365, 1273
BseGI GGATG 8 cut(s) 384, 631, 714, 1206, 1407, 1502, 1617, 1841
BseLI CCNNNNNNNGG 5 cut(s) 791, 1417, 1627, 1819, 2032
BseMI GCAATG 1 cut(s) 2138
BseMII CTCAG 7 cut(s) 914, 1076, 1322, 1335, 1505, 1532, 1545
BseNI ACTGG 6 cut(s) 149, 459, 636, 1059, 1815, 2051
BseRI GAGGAG 1 cut(s) 1191
BseXI GCAGC 8 cut(s) 536, 615, 618, 621, 624, 749, 1763, 2078
BseYI CCCAGC 1 cut(s) 374
BsgI GTGCAG 1 cut(s) 1762
BshFI GGCC 8 cut(s) 130, 370, 795, 1388, 1598, 1951, 2202, 2212
BshNI GGYRCC 1 cut(s) 1874
BshTI ACCGGT 2 cut(s) 1114, 1909
BsiHKAI GWGCWC 2 cut(s) 1057, 1890
BsiSI CCGG 4 cut(s) 595, 1115, 1193, 1910
BslFI GGGAC 2 cut(s) 767, 1742
BslI CCNNNNNNNGG 5 cut(s) 791, 1417, 1627, 1819, 2032
BsmAI GTCTC 6 cut(s) 272, 310, 729, 1445, 1578, 1817
BsmBI CGTCTC 1 cut(s) 1578
BsmFI GGGAC 2 cut(s) 767, 1742
BsmI GAATGC 2 cut(s) 1469, 1679
BsnI GGCC 8 cut(s) 130, 370, 795, 1388, 1598, 1951, 2202, 2212
Bso31I GGTCTC 1 cut(s) 272
Bsp1286I GDGCHC 2 cut(s) 1057, 1890
Bsp143I GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
Bsp19I CCATGG 2 cut(s) 365, 1273
BspACI CCGC 5 cut(s) 271, 459, 1107, 1172, 2199
BspANI GGCC 8 cut(s) 130, 370, 795, 1388, 1598, 1951, 2202, 2212
BspCNI CTCAG 7 cut(s) 913, 1077, 1323, 1336, 1504, 1533, 1546
BspLI GGNNCC 1 cut(s) 1876
BspPI GGATC 2 cut(s) 862, 869
BspT107I GGYRCC 1 cut(s) 1874
BspTNI GGTCTC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 2138
BsrFI RCCGGY 2 cut(s) 1114, 1909
BsrI ACTGG 6 cut(s) 149, 459, 636, 1059, 1815, 2051
BssAI RCCGGY 2 cut(s) 1114, 1909
BssECI CCNNGG 2 cut(s) 365, 1273
BssMI GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
BssNAI GTATAC 1 cut(s) 557
BssT1I CCWWGG 2 cut(s) 365, 1273
Bst1107I GTATAC 1 cut(s) 557
Bst4CI ACNGT 6 cut(s) 421, 869, 1322, 1397, 1572, 1607
Bst6I CTCTTC 5 cut(s) 738, 822, 1080, 1302, 2068
BstBAI YACGTR 1 cut(s) 560
BstDSI CCRYGG 2 cut(s) 365, 1273
BstF5I GGATG 8 cut(s) 384, 631, 714, 1206, 1407, 1502, 1617, 1841
BstKTI GATC 9 cut(s) 10, 79, 309, 338, 750, 815, 857, 877, 1162
BstMAI GTCTC 6 cut(s) 272, 310, 729, 1445, 1578, 1817
BstMBI GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
BstMWI GCNNNNNNNGC 4 cut(s) 533, 609, 612, 2196
BstNSI RCATGY 2 cut(s) 509, 835
BstSCI CCNGG 1 cut(s) 594
BstSFI CTRYAG 1 cut(s) 245
BstV1I GCAGC 8 cut(s) 536, 615, 618, 621, 624, 749, 1763, 2078
BstV2I GAAGAC 1 cut(s) 1004
BstX2I RGATCY 2 cut(s) 812, 854
BstXI CCANNNNNNTGG 2 cut(s) 739, 1280
BstYI RGATCY 2 cut(s) 812, 854
BstZ17I GTATAC 1 cut(s) 557
Bsu36I CCTNAGG 2 cut(s) 1344, 1554
BsuI GTATCC 1 cut(s) 1344
BsuRI GGCC 8 cut(s) 130, 370, 795, 1388, 1598, 1951, 2202, 2212
BtgI CCRYGG 2 cut(s) 365, 1273
BtrI CACGTC 1 cut(s) 1010
BtsCI GGATG 8 cut(s) 384, 631, 714, 1206, 1407, 1502, 1617, 1841
BtsI GCAGTG 1 cut(s) 1304
BtsIMutI CAGTG 1 cut(s) 1304
CaiI CAGNNNCTG 2 cut(s) 1084, 1306
Cfr10I RCCGGY 2 cut(s) 1114, 1909
Cfr13I GGNCC 3 cut(s) 128, 2201, 2211
CseI GACGC 1 cut(s) 1744
Csp6I GTAC 4 cut(s) 629, 1112, 1514, 1721
CspAI ACCGGT 2 cut(s) 1114, 1909
CspCI CAANNNNNGTGG 4 cut(s) 525, 560, 966, 1001
CviQI GTAC 4 cut(s) 629, 1112, 1514, 1721
DpnI GATC 9 cut(s) 9, 78, 308, 337, 749, 814, 856, 876, 1161
DpnII GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
DrdI GACNNNNNNGTC 1 cut(s) 324
DriI GACNNNNNGTC 1 cut(s) 832
DseDI GACNNNNNNGTC 1 cut(s) 324
EaeI YGGCCR 2 cut(s) 368, 793
Eam1104I CTCTTC 5 cut(s) 738, 822, 1080, 1302, 2068
Eam1105I GACNNNNNGTC 1 cut(s) 832
EarI CTCTTC 5 cut(s) 738, 822, 1080, 1302, 2068
Ecl136II GAGCTC 1 cut(s) 1888
Eco130I CCWWGG 2 cut(s) 365, 1273
Eco24I GRGCYC 1 cut(s) 1890
Eco31I GGTCTC 1 cut(s) 272
Eco53kI GAGCTC 1 cut(s) 1888
Eco57I CTGAAG 4 cut(s) 863, 998, 1061, 1283
Eco81I CCTNAGG 2 cut(s) 1344, 1554
EcoICRI GAGCTC 1 cut(s) 1888
EcoT14I CCWWGG 2 cut(s) 365, 1273
EcoT22I ATGCAT 1 cut(s) 1469
EcoT38I GRGCYC 1 cut(s) 1890
ErhI CCWWGG 2 cut(s) 365, 1273
Esp3I CGTCTC 1 cut(s) 1578
FaqI GGGAC 2 cut(s) 767, 1742
FauI CCCGC 1 cut(s) 1165
FbaI TGATCA 1 cut(s) 306
FblI GTMKAC 1 cut(s) 556
FokI GGATG 8 cut(s) 391, 638, 721, 1213, 1394, 1489, 1604, 1828
FriOI GRGCYC 1 cut(s) 1890
FspBI CTAG 5 cut(s) 542, 851, 1355, 1565, 1724
GsaI CCCAGC 1 cut(s) 378
GsuI CTGGAG 4 cut(s) 1421, 1631, 1808, 1841
HaeIII GGCC 8 cut(s) 130, 370, 795, 1388, 1598, 1951, 2202, 2212
HapII CCGG 4 cut(s) 595, 1115, 1193, 1910
HgaI GACGC 1 cut(s) 1744
HincII GTYRAC 3 cut(s) 1047, 1183, 1257
HindII GTYRAC 3 cut(s) 1047, 1183, 1257
HindIII AAGCTT 3 cut(s) 94, 233, 568
HinfI GANTC 8 cut(s) 111, 444, 780, 1219, 1403, 1613, 1892, 1978
HpaI GTTAAC 3 cut(s) 1047, 1183, 1257
HpaII CCGG 4 cut(s) 595, 1115, 1193, 1910
HphI GGTGA 3 cut(s) 701, 1840, 2071
Hpy166II GTNNAC 9 cut(s) 557, 974, 1047, 1112, 1183, 1257, 1514, 1721, 1766
Hpy188I TCNGA 4 cut(s) 196, 859, 903, 1080
Hpy8I GTNNAC 9 cut(s) 557, 974, 1047, 1112, 1183, 1257, 1514, 1721, 1766
HpyCH4III ACNGT 6 cut(s) 421, 869, 1322, 1397, 1572, 1607
HpyCH4IV ACGT 5 cut(s) 31, 559, 1009, 1475, 1685
HpyF10VI GCNNNNNNNGC 4 cut(s) 533, 609, 612, 2196
HpySE526I ACGT 5 cut(s) 31, 559, 1009, 1475, 1685
Ksp22I TGATCA 1 cut(s) 306
KspAI GTTAAC 3 cut(s) 1047, 1183, 1257
Kzo9I GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
LmnI GCTCC 4 cut(s) 1018, 1060, 1273, 2021
Lsp1109I GCAGC 8 cut(s) 536, 615, 618, 621, 624, 749, 1763, 2078
LweI GCATC 3 cut(s) 1476, 1850, 2177
MaeI CTAG 5 cut(s) 542, 851, 1355, 1565, 1724
MaeII ACGT 5 cut(s) 31, 559, 1009, 1475, 1685
MaeIII GTNAC 6 cut(s) 584, 869, 1037, 1117, 1302, 2115
MalI GATC 9 cut(s) 9, 78, 308, 337, 749, 814, 856, 876, 1161
MboI GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
MboII GAAGA 8 cut(s) 755, 809, 1004, 1067, 1222, 1289, 1870, 2055
MfeI CAATTG 2 cut(s) 156, 470
MflI RGATCY 2 cut(s) 812, 854
MhlI GDGCHC 2 cut(s) 1057, 1890
MlsI TGGCCA 2 cut(s) 370, 795
MluNI TGGCCA 2 cut(s) 370, 795
MlyI GAGTC 4 cut(s) 120, 789, 1412, 1622
MmeI TCCRAC 2 cut(s) 1566, 1776
Mox20I TGGCCA 2 cut(s) 370, 795
Mph1103I ATGCAT 1 cut(s) 1469
MroXI GAANNNNTTC 2 cut(s) 639, 1977
MscI TGGCCA 2 cut(s) 370, 795
MseI TTAA 9 cut(s) 485, 566, 668, 942, 1046, 1182, 1205, 1256, 2147
Msp20I TGGCCA 2 cut(s) 370, 795
MspA1I CMGCKG 1 cut(s) 374
MspI CCGG 4 cut(s) 595, 1115, 1193, 1910
MspR9I CCNGG 1 cut(s) 596
MunI CAATTG 2 cut(s) 156, 470
Mva1269I GAATGC 2 cut(s) 1469, 1679
MwoI GCNNNNNNNGC 4 cut(s) 533, 609, 612, 2196
NciI CCSGG 1 cut(s) 596
NcoI CCATGG 2 cut(s) 365, 1273
NdeII GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
NlaIV GGNNCC 1 cut(s) 1876
NmuCI GTSAC 3 cut(s) 1037, 1302, 2115
NsiI ATGCAT 1 cut(s) 1469
NspI RCATGY 2 cut(s) 509, 835
PciI ACATGT 2 cut(s) 505, 831
PctI GAATGC 2 cut(s) 1469, 1679
PdmI GAANNNNTTC 2 cut(s) 639, 1977
PfeI GAWTC 4 cut(s) 444, 1219, 1892, 1978
PflMI CCANNNNNTGG 1 cut(s) 791
PinAI ACCGGT 2 cut(s) 1114, 1909
PleI GAGTC 4 cut(s) 119, 788, 1411, 1621
PpsI GAGTC 4 cut(s) 119, 788, 1411, 1621
Ppu21I YACGTR 1 cut(s) 560
PscI ACATGT 2 cut(s) 505, 831
PsiI TTATAA 2 cut(s) 240, 1382
Psp124BI GAGCTC 1 cut(s) 1890
PspFI CCCAGC 1 cut(s) 374
PspN4I GGNNCC 1 cut(s) 1876
PspPI GGNCC 3 cut(s) 128, 2201, 2211
PstNI CAGNNNCTG 2 cut(s) 1084, 1306
PsuI RGATCY 2 cut(s) 812, 854
PvuII CAGCTG 1 cut(s) 374
RsaI GTAC 4 cut(s) 630, 1113, 1515, 1722
RsaNI GTAC 4 cut(s) 629, 1112, 1514, 1721
SacI GAGCTC 1 cut(s) 1890
SaqAI TTAA 9 cut(s) 485, 566, 668, 942, 1046, 1182, 1205, 1256, 2147
Sau3AI GATC 9 cut(s) 7, 76, 306, 335, 747, 812, 854, 874, 1159
Sau96I GGNCC 3 cut(s) 128, 2201, 2211
SchI GAGTC 4 cut(s) 120, 789, 1412, 1622
ScrFI CCNGG 1 cut(s) 596
SduI GDGCHC 2 cut(s) 1057, 1890
SfaNI GCATC 3 cut(s) 1476, 1850, 2177
SfcI CTRYAG 1 cut(s) 245
SmlI CTYRAG 2 cut(s) 175, 1925
SmoI CTYRAG 2 cut(s) 175, 1925
SsiI CCGC 5 cut(s) 271, 459, 1107, 1172, 2199
SspMI CTAG 5 cut(s) 542, 851, 1355, 1565, 1724
SstI GAGCTC 1 cut(s) 1890
StyD4I CCNGG 1 cut(s) 594
StyI CCWWGG 2 cut(s) 365, 1273
TaaI ACNGT 6 cut(s) 421, 869, 1322, 1397, 1572, 1607
TaiI ACGT 5 cut(s) 34, 562, 1012, 1478, 1688
TaqI TCGA 8 cut(s) 447, 581, 963, 1158, 1443, 1751, 1890, 2022
TatI WGTACW 3 cut(s) 628, 1513, 1720
TauI GCSGC 2 cut(s) 462, 2202
TfiI GAWTC 4 cut(s) 444, 1219, 1892, 1978
Tru1I TTAA 9 cut(s) 485, 566, 668, 942, 1046, 1182, 1205, 1256, 2147
Tru9I TTAA 9 cut(s) 485, 566, 668, 942, 1046, 1182, 1205, 1256, 2147
TscAI CASTG 1 cut(s) 1311
TseFI GTSAC 3 cut(s) 1037, 1302, 2115
TseI GCWGC 8 cut(s) 524, 603, 606, 609, 612, 762, 1776, 2091
Tsp45I GTSAC 3 cut(s) 1037, 1302, 2115
TspDTI ATGAA 6 cut(s) 182, 673, 693, 1305, 1884, 2149
TspGWI ACGGA 3 cut(s) 1433, 1643, 2103
TspRI CASTG 1 cut(s) 1311
Van91I CCANNNNNTGG 1 cut(s) 791
XapI RAATTY 4 cut(s) 662, 695, 736, 2037
XceI RCATGY 2 cut(s) 509, 835
XmiI GTMKAC 1 cut(s) 556
XmnI GAANNNNTTC 2 cut(s) 639, 1977
XspI CTAG 5 cut(s) 542, 851, 1355, 1565, 1724
Zsp2I ATGCAT 1 cut(s) 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.