disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TRAPPC10_1st | PF23036 | 32 - 117 | 1.9e-08 | Trafficking protein particle complex subunit 10-like, N-terminal |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 102 |
| AcoI | YGGCCR | 1 cut(s) | 32 |
| AcsI | RAATTY | 2 cut(s) | 66, 284 |
| AcuI | CTGAAG | 1 cut(s) | 324 |
| AgsI | TTSAA | 2 cut(s) | 109, 245 |
| AluBI | AGCT | 2 cut(s) | 23, 258 |
| AluI | AGCT | 2 cut(s) | 23, 258 |
| Alw21I | GWGCWC | 1 cut(s) | 25 |
| AlwI | GGATC | 1 cut(s) | 102 |
| AoxI | GGCC | 1 cut(s) | 32 |
| ApeKI | GCWGC | 1 cut(s) | 279 |
| ApoI | RAATTY | 2 cut(s) | 66, 284 |
| BalI | TGGCCA | 1 cut(s) | 34 |
| BanII | GRGCYC | 1 cut(s) | 25 |
| BbsI | GAAGAC | 1 cut(s) | 327 |
| Bbv12I | GWGCWC | 1 cut(s) | 25 |
| BbvI | GCAGC | 1 cut(s) | 266 |
| BccI | CCATC | 1 cut(s) | 67 |
| BceAI | ACGGC | 1 cut(s) | 143 |
| BciVI | GTATCC | 1 cut(s) | 190 |
| BclI | TGATCA | 1 cut(s) | 202 |
| BfuI | GTATCC | 1 cut(s) | 190 |
| BisI | GCNGC | 1 cut(s) | 280 |
| BlsI | GCNGC | 1 cut(s) | 281 |
| BmsI | GCATC | 1 cut(s) | 357 |
| BpiI | GAAGAC | 1 cut(s) | 327 |
| BsaJI | CCNNGG | 2 cut(s) | 125, 183 |
| BseDI | CCNNGG | 2 cut(s) | 125, 183 |
| BseGI | GGATG | 1 cut(s) | 190 |
| BseXI | GCAGC | 1 cut(s) | 266 |
| BshFI | GGCC | 1 cut(s) | 34 |
| BsiHKAI | GWGCWC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 34 |
| Bsp1286I | GDGCHC | 1 cut(s) | 25 |
| Bsp143I | GATC | 4 cut(s) | 16, 75, 94, 202 |
| BspANI | GGCC | 1 cut(s) | 34 |
| BspPI | GGATC | 1 cut(s) | 102 |
| BssECI | CCNNGG | 2 cut(s) | 125, 183 |
| BssMI | GATC | 4 cut(s) | 16, 75, 94, 202 |
| BssT1I | CCWWGG | 1 cut(s) | 183 |
| Bst6I | CTCTTC | 1 cut(s) | 260 |
| BstDSI | CCRYGG | 1 cut(s) | 125 |
| BstF5I | GGATG | 1 cut(s) | 190 |
| BstKTI | GATC | 4 cut(s) | 19, 78, 97, 205 |
| BstMBI | GATC | 4 cut(s) | 16, 75, 94, 202 |
| BstV1I | GCAGC | 1 cut(s) | 266 |
| BstV2I | GAAGAC | 1 cut(s) | 327 |
| BstX2I | RGATCY | 1 cut(s) | 94 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 340 |
| BstYI | RGATCY | 1 cut(s) | 94 |
| BsuI | GTATCC | 1 cut(s) | 190 |
| BsuRI | GGCC | 1 cut(s) | 34 |
| BtgI | CCRYGG | 1 cut(s) | 125 |
| BtsCI | GGATG | 1 cut(s) | 190 |
| CviAII | CATG | 2 cut(s) | 30, 374 |
| CviJI | RGCY | 5 cut(s) | 23, 34, 130, 209, 258 |
| CviKI_1 | RGCY | 5 cut(s) | 23, 34, 130, 209, 258 |
| DpnI | GATC | 4 cut(s) | 18, 77, 96, 204 |
| DpnII | GATC | 4 cut(s) | 16, 75, 94, 202 |
| EaeI | YGGCCR | 1 cut(s) | 32 |
| Eam1104I | CTCTTC | 1 cut(s) | 260 |
| EarI | CTCTTC | 1 cut(s) | 260 |
| Ecl136II | GAGCTC | 1 cut(s) | 23 |
| Eco130I | CCWWGG | 1 cut(s) | 183 |
| Eco24I | GRGCYC | 1 cut(s) | 25 |
| Eco53kI | GAGCTC | 1 cut(s) | 23 |
| Eco57I | CTGAAG | 1 cut(s) | 324 |
| EcoICRI | GAGCTC | 1 cut(s) | 23 |
| EcoRI | GAATTC | 1 cut(s) | 66 |
| EcoT14I | CCWWGG | 1 cut(s) | 183 |
| EcoT38I | GRGCYC | 1 cut(s) | 25 |
| ErhI | CCWWGG | 1 cut(s) | 183 |
| FaeI | CATG | 2 cut(s) | 33, 377 |
| FaiI | YATR | 6 cut(s) | 14, 31, 234, 295, 297, 375 |
| FatI | CATG | 2 cut(s) | 29, 373 |
| FbaI | TGATCA | 1 cut(s) | 202 |
| Fnu4HI | GCNGC | 1 cut(s) | 280 |
| FokI | GGATG | 1 cut(s) | 177 |
| FriOI | GRGCYC | 1 cut(s) | 25 |
| Fsp4HI | GCNGC | 1 cut(s) | 280 |
| GluI | GCNGC | 1 cut(s) | 280 |
| HaeIII | GGCC | 1 cut(s) | 34 |
| Hin1II | CATG | 2 cut(s) | 33, 377 |
| HinfI | GANTC | 1 cut(s) | 329 |
| Hpy188I | TCNGA | 1 cut(s) | 353 |
| Hpy188III | TCNNGA | 5 cut(s) | 54, 63, 82, 98, 109 |
| HpyCH4V | TGCA | 2 cut(s) | 282, 348 |
| Hsp92II | CATG | 2 cut(s) | 33, 377 |
| Ksp22I | TGATCA | 1 cut(s) | 202 |
| Kzo9I | GATC | 4 cut(s) | 16, 75, 94, 202 |
| LmnI | GCTCC | 2 cut(s) | 28, 263 |
| LpnPI | CCDG | 2 cut(s) | 67, 77 |
| Lsp1109I | GCAGC | 1 cut(s) | 266 |
| LweI | GCATC | 1 cut(s) | 357 |
| MalI | GATC | 4 cut(s) | 18, 77, 96, 204 |
| MboI | GATC | 4 cut(s) | 16, 75, 94, 202 |
| MboII | GAAGA | 3 cut(s) | 277, 317, 332 |
| MflI | RGATCY | 1 cut(s) | 94 |
| MhlI | GDGCHC | 1 cut(s) | 25 |
| MlsI | TGGCCA | 1 cut(s) | 34 |
| MluCI | AATT | 5 cut(s) | 49, 66, 138, 215, 284 |
| MluNI | TGGCCA | 1 cut(s) | 34 |
| MmeI | TCCRAC | 1 cut(s) | 50 |
| MnlI | CCTC | 1 cut(s) | 267 |
| Mox20I | TGGCCA | 1 cut(s) | 34 |
| MscI | TGGCCA | 1 cut(s) | 34 |
| Msp20I | TGGCCA | 1 cut(s) | 34 |
| NdeII | GATC | 4 cut(s) | 16, 75, 94, 202 |
| NlaIII | CATG | 2 cut(s) | 33, 377 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 80 |
| PfeI | GAWTC | 1 cut(s) | 329 |
| PkrI | GCNGC | 1 cut(s) | 281 |
| Psp124BI | GAGCTC | 1 cut(s) | 25 |
| PsuI | RGATCY | 1 cut(s) | 94 |
| SacI | GAGCTC | 1 cut(s) | 25 |
| SatI | GCNGC | 1 cut(s) | 280 |
| Sau3AI | GATC | 4 cut(s) | 16, 75, 94, 202 |
| SduI | GDGCHC | 1 cut(s) | 25 |
| SetI | ASST | 5 cut(s) | 25, 260, 278, 294, 314 |
| SfaNI | GCATC | 1 cut(s) | 357 |
| Sse9I | AATT | 5 cut(s) | 49, 66, 138, 215, 284 |
| SstI | GAGCTC | 1 cut(s) | 25 |
| StyI | CCWWGG | 1 cut(s) | 183 |
| TaqI | TCGA | 4 cut(s) | 19, 74, 83, 288 |
| TasI | AATT | 5 cut(s) | 49, 66, 138, 215, 284 |
| TfiI | GAWTC | 1 cut(s) | 329 |
| TseI | GCWGC | 1 cut(s) | 279 |
| TspDTI | ATGAA | 1 cut(s) | 168 |
| XapI | RAATTY | 2 cut(s) | 66, 284 |