Rorug05G0334100

threonine-type endopeptidase activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
40467893 .. 40472623
4731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0334100.1

Sequence Viewer

Length: 456 bp
ATGAGTTACCTATTGACGACATTGACAAAGAAGCAAGAGGTGGATTCGATCATCAGATCCACCATCGACAAGGTCCTCGTCCTCCGCTTCGGCCGCGCTTCCGATTCCGTCTCTCTTCTTCTCGACGACGTTCTCGCCAAATCGGCCGGCGACGTCTCCAAGTTCGCAACCGTGGCACTCGTCGATGTCGATTCCGACGACATTCAGGTCTACCTCCATTACTTCGACATCACTTTGTTTCCCTCCACCATTTTCTTCTTCAACGCCCATCATATGAAGATGGATTCCGGAACTGCTGATCACACCAAATGGATCGGCGCGTTTCGGACGAAGCAGGACTTCATTGATGTCGTGGAGGCGATTTTCAGAGGAGCGATGAAAGGGAAGCTAATTGTGAACTGCCCCTTGCCGCCGGAACGAATTCCGAGATACCAGTTGTACTATAAGGATGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000502 GO:0002376 GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005813 GO:0005815 GO:0005829 GO:0005839 GO:0005856 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007088 GO:0007098 GO:0007154 GO:0007165 GO:0007166 GO:0007346 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009896 GO:0009987 GO:0010033 GO:0010498 GO:0010499 GO:0010564 GO:0010638 GO:0010965 GO:0012505 GO:0015630 GO:0016020 GO:0016043 GO:0016579 GO:0016787 GO:0019221 GO:0019222 GO:0019538 GO:0019774 GO:0019882 GO:0019941 GO:0022402 GO:0022607 GO:0023052 GO:0030071 GO:0030154 GO:0030162 GO:0030163 GO:0031023 GO:0031331 GO:0031597 GO:0031974 GO:0031981 GO:0031984 GO:0032270 GO:0032436 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0034097 GO:0034340 GO:0034515 GO:0034622 GO:0036211 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043248 GO:0043412 GO:0043632 GO:0043687 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044430 GO:0044432 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045087 GO:0045444 GO:0045732 GO:0045787 GO:0045840 GO:0045842 GO:0045862 GO:0045931 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051246 GO:0051247 GO:0051336 GO:0051603 GO:0051716 GO:0051726 GO:0051781 GO:0051783 GO:0051785 GO:0051983 GO:0051984 GO:0052547 GO:0052548 GO:0060255 GO:0060337 GO:0062033 GO:0065003 GO:0065007 GO:0065009 GO:0070011 GO:0070013 GO:0070646 GO:0070647 GO:0070887 GO:0071310 GO:0071345 GO:0071357 GO:0071704 GO:0071840 GO:0080090 GO:0080129 GO:0090068 GO:0098827 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1901970 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902099 GO:1902101 GO:1902494 GO:1903052 GO:1903364 GO:1905368 GO:1905369 GO:1905818 GO:1905820 GO:1990111 GO:2001252
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

151

Amino Acids

17.14

Weight (kDa)

6.4

Isoelectric Point (pI)

28.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIM1 PF02966 4 - 137 1.7e-47 Mitosis protein DIM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AatII GACGTC 1 cut(s) 156
AccI GTMKAC 1 cut(s) 210
AccII CGCG 2 cut(s) 96, 320
AccIII TCCGGA 1 cut(s) 287
AciI CCGC 3 cut(s) 85, 94, 410
AclWI GGATC 2 cut(s) 51, 320
AcoI YGGCCR 2 cut(s) 91, 144
AcsI RAATTY 1 cut(s) 420
AcyI GRCGYC 1 cut(s) 153
AfaI GTAC 1 cut(s) 440
AgsI TTSAA 1 cut(s) 262
AluBI AGCT 1 cut(s) 388
AluI AGCT 1 cut(s) 388
Alw26I GTCTC 2 cut(s) 115, 160
AlwI GGATC 2 cut(s) 51, 320
Aor13HI TCCGGA 1 cut(s) 287
AoxI GGCC 2 cut(s) 91, 144
ApoI RAATTY 1 cut(s) 420
Asp700I GAANNNNTTC 1 cut(s) 420
AspLEI GCGC 2 cut(s) 98, 320
AspS9I GGNCC 1 cut(s) 73
AvaII GGWCC 1 cut(s) 73
BccI CCATC 3 cut(s) 71, 274, 276
BclI TGATCA 1 cut(s) 298
BcoDI GTCTC 2 cut(s) 115, 160
BglI GCCNNNNNGGC 1 cut(s) 143
BisI GCNGC 2 cut(s) 94, 410
BlsI GCNGC 2 cut(s) 95, 411
Bme18I GGWCC 1 cut(s) 73
BmgT120I GGNCC 1 cut(s) 73
BsaHI GRCGYC 1 cut(s) 153
BsaJI CCNNGG 1 cut(s) 171
BsaWI WCCGGW 1 cut(s) 287
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 1 cut(s) 433
BseAI TCCGGA 1 cut(s) 287
BseDI CCNNGG 1 cut(s) 171
BseGI GGATG 1 cut(s) 454
BseNI ACTGG 1 cut(s) 433
BseRI GAGGAG 1 cut(s) 384
BseX3I CGGCCG 2 cut(s) 91, 144
Bsh1236I CGCG 2 cut(s) 96, 320
Bsh1285I CGRYCG 2 cut(s) 94, 147
BshFI GGCC 2 cut(s) 93, 146
BsiEI CGRYCG 2 cut(s) 94, 147
BsiSI CCGG 3 cut(s) 147, 288, 413
BsmAI GTCTC 2 cut(s) 115, 160
BsmBI CGTCTC 2 cut(s) 115, 160
BsnI GGCC 2 cut(s) 93, 146
Bsp13I TCCGGA 1 cut(s) 287
Bsp143I GATC 4 cut(s) 48, 56, 298, 312
BspACI CCGC 3 cut(s) 85, 94, 410
BspANI GGCC 2 cut(s) 93, 146
BspEI TCCGGA 1 cut(s) 287
BspFNI CGCG 2 cut(s) 96, 320
BspPI GGATC 2 cut(s) 51, 320
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 1 cut(s) 433
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 1 cut(s) 171
BssMI GATC 4 cut(s) 48, 56, 298, 312
BssNI GRCGYC 1 cut(s) 153
Bst4CI ACNGT 1 cut(s) 172
Bst6I CTCTTC 1 cut(s) 120
BstACI GRCGYC 1 cut(s) 153
BstC8I GCNNGC 1 cut(s) 148
BstDSI CCRYGG 1 cut(s) 171
BstF5I GGATG 1 cut(s) 454
BstFNI CGCG 2 cut(s) 96, 320
BstHHI GCGC 2 cut(s) 98, 320
BstKTI GATC 4 cut(s) 51, 59, 301, 315
BstMAI GTCTC 2 cut(s) 115, 160
BstMBI GATC 4 cut(s) 48, 56, 298, 312
BstMCI CGRYCG 2 cut(s) 94, 147
BstMWI GCNNNNNNNGC 3 cut(s) 93, 143, 173
BstUI CGCG 2 cut(s) 96, 320
BstX2I RGATCY 1 cut(s) 56
BstYI RGATCY 1 cut(s) 56
BstZI CGGCCG 2 cut(s) 91, 144
BsuRI GGCC 2 cut(s) 93, 146
BtgI CCRYGG 1 cut(s) 171
BtgZI GCGATG 1 cut(s) 389
BtsCI GGATG 1 cut(s) 454
Cac8I GCNNGC 1 cut(s) 148
CfoI GCGC 2 cut(s) 98, 320
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 73
Csp6I GTAC 1 cut(s) 439
CviJI RGCY 3 cut(s) 93, 146, 388
CviKI_1 RGCY 3 cut(s) 93, 146, 388
CviQI GTAC 1 cut(s) 439
DpnI GATC 4 cut(s) 50, 58, 300, 314
DpnII GATC 4 cut(s) 48, 56, 298, 312
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 2 cut(s) 91, 144
EagI CGGCCG 2 cut(s) 91, 144
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
EclXI CGGCCG 2 cut(s) 91, 144
Eco47I GGWCC 1 cut(s) 73
Eco52I CGGCCG 2 cut(s) 91, 144
EcoO109I RGGNCCY 1 cut(s) 73
EcoRI GAATTC 1 cut(s) 420
Esp3I CGTCTC 2 cut(s) 115, 160
FaiI YATR 3 cut(s) 273, 275, 444
FalI AAGNNNNNCTT 2 cut(s) 323, 355
FauNDI CATATG 1 cut(s) 273
FbaI TGATCA 1 cut(s) 298
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 2 cut(s) 94, 410
Fsp4HI GCNGC 2 cut(s) 94, 410
GlaI GCGC 2 cut(s) 97, 319
GluI GCNGC 2 cut(s) 94, 410
HaeIII GGCC 2 cut(s) 93, 146
HapII CCGG 3 cut(s) 147, 288, 413
HhaI GCGC 2 cut(s) 98, 320
Hin1I GRCGYC 1 cut(s) 153
Hin6I GCGC 2 cut(s) 96, 318
HinP1I GCGC 2 cut(s) 96, 318
HinfI GANTC 4 cut(s) 44, 104, 191, 284
HpaII CCGG 3 cut(s) 147, 288, 413
Hpy166II GTNNAC 2 cut(s) 211, 397
Hpy188I TCNGA 6 cut(s) 56, 103, 196, 327, 368, 426
Hpy188III TCNNGA 2 cut(s) 122, 288
Hpy8I GTNNAC 2 cut(s) 211, 397
Hpy99I CGWCG 5 cut(s) 128, 131, 155, 185, 200
HpyCH4III ACNGT 1 cut(s) 172
HpyCH4IV ACGT 2 cut(s) 129, 153
HpyF10VI GCNNNNNNNGC 3 cut(s) 93, 143, 173
HpySE526I ACGT 2 cut(s) 129, 153
Hsp92I GRCGYC 1 cut(s) 153
HspAI GCGC 2 cut(s) 96, 318
Kpn2I TCCGGA 1 cut(s) 287
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 298
Kzo9I GATC 4 cut(s) 48, 56, 298, 312
LmnI GCTCC 1 cut(s) 371
LpnPI CCDG 6 cut(s) 160, 191, 301, 320, 426, 446
MaeII ACGT 2 cut(s) 129, 153
MaeIII GTNAC 1 cut(s) 5
MalI GATC 4 cut(s) 50, 58, 300, 314
MboI GATC 4 cut(s) 48, 56, 298, 312
MboII GAAGA 5 cut(s) 107, 110, 247, 250, 289
MflI RGATCY 1 cut(s) 56
MluCI AATT 2 cut(s) 390, 420
MmeI TCCRAC 1 cut(s) 219
MnlI CCTC 7 cut(s) 31, 86, 92, 224, 253, 349, 362
MroI TCCGGA 1 cut(s) 287
MroNI GCCGGC 1 cut(s) 146
MroXI GAANNNNTTC 1 cut(s) 420
MspI CCGG 3 cut(s) 147, 288, 413
MvnI CGCG 2 cut(s) 96, 320
MwoI GCNNNNNNNGC 3 cut(s) 93, 143, 173
NaeI GCCGGC 1 cut(s) 148
NdeI CATATG 1 cut(s) 273
NdeII GATC 4 cut(s) 48, 56, 298, 312
NgoMIV GCCGGC 1 cut(s) 146
PcsI WCGNNNNNNNCGW 2 cut(s) 186, 195
PdiI GCCGGC 1 cut(s) 148
PdmI GAANNNNTTC 1 cut(s) 420
PfeI GAWTC 4 cut(s) 44, 104, 191, 284
PflFI GACNNNGTC 1 cut(s) 71
PkrI GCNGC 2 cut(s) 95, 411
PpuMI RGGWCCY 1 cut(s) 73
Psp5II RGGWCCY 1 cut(s) 73
PspPI GGNCC 1 cut(s) 73
PspPPI RGGWCCY 1 cut(s) 73
PsuI RGATCY 1 cut(s) 56
PsyI GACNNNGTC 1 cut(s) 71
RsaI GTAC 1 cut(s) 440
RsaNI GTAC 1 cut(s) 439
SatI GCNGC 2 cut(s) 94, 410
Sau3AI GATC 4 cut(s) 48, 56, 298, 312
Sau96I GGNCC 1 cut(s) 73
SetI ASST 8 cut(s) 12, 42, 75, 132, 156, 210, 216, 390
SinI GGWCC 1 cut(s) 73
Sse9I AATT 2 cut(s) 390, 420
SsiI CCGC 3 cut(s) 85, 94, 410
TaaI ACNGT 1 cut(s) 172
TaiI ACGT 2 cut(s) 132, 156
TaqI TCGA 6 cut(s) 47, 66, 123, 183, 189, 225
TasI AATT 2 cut(s) 390, 420
TatI WGTACW 1 cut(s) 438
TauI GCSGC 2 cut(s) 96, 412
TfiI GAWTC 4 cut(s) 44, 104, 191, 284
TspDTI ATGAA 3 cut(s) 290, 331, 392
TspGWI ACGGA 1 cut(s) 97
Tth111I GACNNNGTC 1 cut(s) 71
VpaK11BI GGWCC 1 cut(s) 73
XapI RAATTY 1 cut(s) 420
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 420
ZraI GACGTC 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.