disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2942 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 2667, 4229 |
| AatII | GACGTC | 1 cut(s) | 3707 |
| Acc16I | TGCGCA | 2 cut(s) | 2773, 2930 |
| Acc36I | ACCTGC | 1 cut(s) | 2304 |
| AccB1I | GGYRCC | 2 cut(s) | 3237, 4042 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 577, 2255, 3143 |
| AccBSI | CCGCTC | 3 cut(s) | 62, 1551, 3918 |
| AccI | GTMKAC | 3 cut(s) | 2071, 2968, 3520 |
| AccII | CGCG | 2 cut(s) | 163, 3911 |
| AccIII | TCCGGA | 1 cut(s) | 2674 |
| AclI | AACGTT | 1 cut(s) | 1751 |
| AclWI | GGATC | 4 cut(s) | 749, 2744, 3659, 4116 |
| AcoI | YGGCCR | 3 cut(s) | 600, 2257, 3662 |
| AcsI | RAATTY | 7 cut(s) | 8, 1307, 1618, 2139, 3690, 3954, 4206 |
| AcuI | CTGAAG | 3 cut(s) | 59, 1916, 3605 |
| AcyI | GRCGYC | 1 cut(s) | 3704 |
| AdeI | CACNNNGTG | 1 cut(s) | 950 |
| AfaI | GTAC | 7 cut(s) | 306, 1122, 1509, 2106, 2861, 3277, 3379 |
| AflIII | ACRYGT | 6 cut(s) | 944, 1609, 1816, 2278, 3515, 3550 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3582 |
| AhlI | ACTAGT | 1 cut(s) | 2666 |
| AjnI | CCWGG | 2 cut(s) | 4036, 4211 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3564, 3596, 4039, 4071 |
| Alw21I | GWGCWC | 4 cut(s) | 28, 126, 2536, 3967 |
| AlwI | GGATC | 4 cut(s) | 749, 2744, 3659, 4116 |
| Aor13HI | TCCGGA | 1 cut(s) | 2674 |
| AoxI | GGCC | 9 cut(s) | 57, 600, 1916, 2113, 2257, 3130, 3662, 3919, 3929 |
| ApoI | RAATTY | 7 cut(s) | 8, 1307, 1618, 2139, 3690, 3954, 4206 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3092, 3124, 3659, 3691 |
| AseI | ATTAAT | 1 cut(s) | 4155 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3690 |
| AspA2I | CCTAGG | 1 cut(s) | 1919 |
| AspLEI | GCGC | 5 cut(s) | 1158, 2774, 2931, 4053, 4064 |
| AspS9I | GGNCC | 5 cut(s) | 1916, 3130, 3584, 3920, 4127 |
| AsuC2I | CCSGG | 2 cut(s) | 3614, 3658 |
| AsuHPI | GGTGA | 6 cut(s) | 208, 787, 1367, 2036, 3844, 4276 |
| AsuII | TTCGAA | 1 cut(s) | 1562 |
| AvaII | GGWCC | 2 cut(s) | 3584, 4127 |
| AvrII | CCTAGG | 1 cut(s) | 1919 |
| AxyI | CCTNAGG | 4 cut(s) | 2306, 2904, 3126, 3243 |
| BaeGI | GKGCMC | 2 cut(s) | 3242, 4045 |
| BalI | TGGCCA | 2 cut(s) | 602, 2259 |
| BanI | GGYRCC | 2 cut(s) | 3237, 4042 |
| BbsI | GAAGAC | 2 cut(s) | 216, 2663 |
| Bbv12I | GWGCWC | 4 cut(s) | 28, 126, 2536, 3967 |
| BbvCI | CCTCAGC | 1 cut(s) | 4020 |
| BceAI | ACGGC | 1 cut(s) | 2478 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1284, 1318 |
| BciT130I | CCWGG | 2 cut(s) | 4038, 4213 |
| BciVI | GTATCC | 2 cut(s) | 445, 1399 |
| BclI | TGATCA | 2 cut(s) | 1803, 4180 |
| BcnI | CCSGG | 2 cut(s) | 3614, 3658 |
| BcuI | ACTAGT | 1 cut(s) | 2666 |
| BfaI | CTAG | 9 cut(s) | 429, 1593, 1920, 2667, 2882, 3197, 3308, 3968, 4169 |
| BfmI | CTRYAG | 5 cut(s) | 1839, 2297, 2595, 3481, 3869 |
| BfoI | RGCGCY | 1 cut(s) | 4054 |
| BfuAI | ACCTGC | 1 cut(s) | 2304 |
| BfuI | GTATCC | 2 cut(s) | 445, 1399 |
| BglII | AGATCT | 2 cut(s) | 1601, 3873 |
| BlnI | CCTAGG | 1 cut(s) | 1919 |
| BlpI | GCTNAGC | 1 cut(s) | 219 |
| Bme1390I | CCNGG | 4 cut(s) | 3614, 3658, 4038, 4213 |
| Bme18I | GGWCC | 2 cut(s) | 3584, 4127 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3582 |
| BmgT120I | GGNCC | 5 cut(s) | 1916, 3130, 3584, 3920, 4127 |
| BmiI | GGNNCC | 3 cut(s) | 2294, 3239, 4044 |
| BmrFI | CCNGG | 4 cut(s) | 3614, 3658, 4038, 4213 |
| BmrI | ACTGGG | 4 cut(s) | 1923, 1943, 2532, 3519 |
| BmuI | ACTGGG | 4 cut(s) | 1923, 1943, 2532, 3519 |
| BpiI | GAAGAC | 2 cut(s) | 216, 2663 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2518, 2550 |
| BpmI | CTGGAG | 3 cut(s) | 2000, 2753, 2860 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4020 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 219 |
| Bpu14I | TTCGAA | 1 cut(s) | 1562 |
| BpuMI | CCSGG | 2 cut(s) | 3614, 3658 |
| BsaAI | YACGTR | 3 cut(s) | 947, 1610, 2863 |
| BsaHI | GRCGYC | 1 cut(s) | 3704 |
| BsaI | GGTCTC | 2 cut(s) | 968, 2921 |
| BsaJI | CCNNGG | 9 cut(s) | 919, 1919, 2755, 3142, 3364, 3909, 4037, 4046, 4211 |
| BsaWI | WCCGGW | 1 cut(s) | 2674 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 168, 198 |
| Bse21I | CCTNAGG | 4 cut(s) | 2306, 2904, 3126, 3243 |
| Bse3DI | GCAATG | 5 cut(s) | 1177, 3077, 3543, 3802, 4134 |
| BseAI | TCCGGA | 1 cut(s) | 2674 |
| BseBI | CCWGG | 2 cut(s) | 4038, 4213 |
| BseDI | CCNNGG | 9 cut(s) | 919, 1919, 2755, 3142, 3364, 3909, 4037, 4046, 4211 |
| BseMI | GCAATG | 5 cut(s) | 1177, 3077, 3543, 3802, 4134 |
| BseRI | GAGGAG | 3 cut(s) | 2510, 2589, 3428 |
| BseSI | GKGCMC | 2 cut(s) | 3242, 4045 |
| BseYI | CCCAGC | 1 cut(s) | 1850 |
| BsgI | GTGCAG | 3 cut(s) | 2974, 3046, 3190 |
| Bsh1236I | CGCG | 2 cut(s) | 163, 3911 |
| BshFI | GGCC | 9 cut(s) | 59, 602, 1918, 2115, 2259, 3132, 3664, 3921, 3931 |
| BshNI | GGYRCC | 2 cut(s) | 3237, 4042 |
| BsiHKAI | GWGCWC | 4 cut(s) | 28, 126, 2536, 3967 |
| BsiSI | CCGG | 5 cut(s) | 265, 1214, 2675, 3614, 3657 |
| BslFI | GGGAC | 5 cut(s) | 539, 2231, 2673, 2695, 3870 |
| BsmFI | GGGAC | 5 cut(s) | 539, 2231, 2673, 2695, 3870 |
| BsmI | GAATGC | 2 cut(s) | 2017, 2419 |
| BsnI | GGCC | 9 cut(s) | 59, 602, 1918, 2115, 2259, 3132, 3664, 3921, 3931 |
| Bso31I | GGTCTC | 2 cut(s) | 968, 2921 |
| Bsp119I | TTCGAA | 1 cut(s) | 1562 |
| Bsp1286I | GDGCHC | 6 cut(s) | 28, 126, 2536, 3242, 3967, 4045 |
| Bsp13I | TCCGGA | 1 cut(s) | 2674 |
| Bsp1407I | TGTACA | 1 cut(s) | 1507 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 219 |
| Bsp19I | CCATGG | 2 cut(s) | 2755, 3364 |
| BspANI | GGCC | 9 cut(s) | 59, 602, 1918, 2115, 2259, 3132, 3664, 3921, 3931 |
| BspEI | TCCGGA | 1 cut(s) | 2674 |
| BspFNI | CGCG | 2 cut(s) | 163, 3911 |
| BspHI | TCATGA | 1 cut(s) | 655 |
| BspLI | GGNNCC | 3 cut(s) | 2294, 3239, 4044 |
| BspMAI | CTGCAG | 2 cut(s) | 2301, 3873 |
| BspMI | ACCTGC | 1 cut(s) | 2304 |
| BspPI | GGATC | 4 cut(s) | 749, 2744, 3659, 4116 |
| BspQI | GCTCTTC | 2 cut(s) | 3591, 3624 |
| BspT104I | TTCGAA | 1 cut(s) | 1562 |
| BspT107I | GGYRCC | 2 cut(s) | 3237, 4042 |
| BspTNI | GGTCTC | 2 cut(s) | 968, 2921 |
| BsrBI | CCGCTC | 3 cut(s) | 62, 1551, 3918 |
| BsrDI | GCAATG | 5 cut(s) | 1177, 3077, 3543, 3802, 4134 |
| BsrGI | TGTACA | 1 cut(s) | 1507 |
| BssECI | CCNNGG | 9 cut(s) | 919, 1919, 2755, 3142, 3364, 3909, 4037, 4046, 4211 |
| BssNI | GRCGYC | 1 cut(s) | 3704 |
| BssT1I | CCWWGG | 6 cut(s) | 919, 1919, 2755, 3142, 3364, 4046 |
| Bst2UI | CCWGG | 2 cut(s) | 4038, 4213 |
| Bst4CI | ACNGT | 5 cut(s) | 970, 1557, 2790, 3451, 3979 |
| Bst6I | CTCTTC | 9 cut(s) | 807, 884, 1770, 3003, 3075, 3321, 3591, 3624, 3786 |
| BstACI | GRCGYC | 1 cut(s) | 3704 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2012, 2235, 4070, 4145 |
| BstAUI | TGTACA | 1 cut(s) | 1507 |
| BstBAI | YACGTR | 3 cut(s) | 947, 1610, 2863 |
| BstBI | TTCGAA | 1 cut(s) | 1562 |
| BstC8I | GCNNGC | 2 cut(s) | 225, 2117 |
| BstDSI | CCRYGG | 3 cut(s) | 2755, 3364, 3909 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2907 |
| BstFNI | CGCG | 2 cut(s) | 163, 3911 |
| BstH2I | RGCGCY | 1 cut(s) | 4054 |
| BstHHI | GCGC | 5 cut(s) | 1158, 2774, 2931, 4053, 4064 |
| BstNI | CCWGG | 2 cut(s) | 4038, 4213 |
| BstNSI | RCATGY | 8 cut(s) | 227, 1491, 1820, 1838, 1988, 2282, 3519, 3554 |
| BstSCI | CCNGG | 4 cut(s) | 3612, 3656, 4036, 4211 |
| BstSFI | CTRYAG | 5 cut(s) | 1839, 2297, 2595, 3481, 3869 |
| BstSLI | GKGCMC | 2 cut(s) | 3242, 4045 |
| BstSNI | TACGTA | 1 cut(s) | 2863 |
| BstUI | CGCG | 2 cut(s) | 163, 3911 |
| BstV2I | GAAGAC | 2 cut(s) | 216, 2663 |
| BstX2I | RGATCY | 5 cut(s) | 741, 1601, 3651, 3873, 4108 |
| BstYI | RGATCY | 5 cut(s) | 741, 1601, 3651, 3873, 4108 |
| Bsu36I | CCTNAGG | 4 cut(s) | 2306, 2904, 3126, 3243 |
| BsuI | GTATCC | 2 cut(s) | 445, 1399 |
| BsuRI | GGCC | 9 cut(s) | 59, 602, 1918, 2115, 2259, 3132, 3664, 3921, 3931 |
| BtgI | CCRYGG | 3 cut(s) | 2755, 3364, 3909 |
| BtsI | GCAGTG | 2 cut(s) | 2013, 3170 |
| BtsIMutI | CAGTG | 6 cut(s) | 1553, 2013, 2954, 3170, 3532, 3984 |
| BveI | ACCTGC | 1 cut(s) | 2304 |
| Cac8I | GCNNGC | 2 cut(s) | 225, 2117 |
| CciI | TCATGA | 1 cut(s) | 655 |
| CfoI | GCGC | 5 cut(s) | 1158, 2774, 2931, 4053, 4064 |
| Cfr13I | GGNCC | 5 cut(s) | 1916, 3130, 3584, 3920, 4127 |
| Cfr42I | CCGCGG | 1 cut(s) | 3912 |
| Csp6I | GTAC | 7 cut(s) | 305, 1121, 1508, 2105, 2860, 3276, 3378 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 951, 986, 1093, 1128, 3960, 3995 |
| CviQI | GTAC | 7 cut(s) | 305, 1121, 1508, 2105, 2860, 3276, 3378 |
| DraI | TTTAAA | 2 cut(s) | 1245, 1756 |
| DraIII | CACNNNGTG | 1 cut(s) | 950 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2667, 4229 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3582 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2667, 4229 |
| EaeI | YGGCCR | 3 cut(s) | 600, 2257, 3662 |
| Eam1104I | CTCTTC | 9 cut(s) | 807, 884, 1770, 3003, 3075, 3321, 3591, 3624, 3786 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3582 |
| EarI | CTCTTC | 9 cut(s) | 807, 884, 1770, 3003, 3075, 3321, 3591, 3624, 3786 |
| Eco105I | TACGTA | 1 cut(s) | 2863 |
| Eco130I | CCWWGG | 6 cut(s) | 919, 1919, 2755, 3142, 3364, 4046 |
| Eco147I | AGGCCT | 1 cut(s) | 2115 |
| Eco31I | GGTCTC | 2 cut(s) | 968, 2921 |
| Eco47I | GGWCC | 2 cut(s) | 3584, 4127 |
| Eco57I | CTGAAG | 3 cut(s) | 59, 1916, 3605 |
| Eco81I | CCTNAGG | 4 cut(s) | 2306, 2904, 3126, 3243 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2907 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3130 |
| EcoRI | GAATTC | 1 cut(s) | 1307 |
| EcoRII | CCWGG | 2 cut(s) | 4036, 4211 |
| EcoT14I | CCWWGG | 6 cut(s) | 919, 1919, 2755, 3142, 3364, 4046 |
| ErhI | CCWWGG | 6 cut(s) | 919, 1919, 2755, 3142, 3364, 4046 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1325, 1357, 1356, 1388, 3141, 3173, 3996, 4028 |
| FaqI | GGGAC | 5 cut(s) | 539, 2231, 2673, 2695, 3870 |
| FbaI | TGATCA | 2 cut(s) | 1803, 4180 |
| FblI | GTMKAC | 3 cut(s) | 2071, 2968, 3520 |
| FspBI | CTAG | 9 cut(s) | 429, 1593, 1920, 2667, 2882, 3197, 3308, 3968, 4169 |
| FspI | TGCGCA | 2 cut(s) | 2773, 2930 |
| GlaI | GCGC | 5 cut(s) | 1157, 2773, 2930, 4052, 4063 |
| GsaI | CCCAGC | 1 cut(s) | 1854 |
| GsuI | CTGGAG | 3 cut(s) | 2000, 2753, 2860 |
| HaeII | RGCGCY | 1 cut(s) | 4054 |
| HaeIII | GGCC | 9 cut(s) | 59, 602, 1918, 2115, 2259, 3132, 3664, 3921, 3931 |
| HapII | CCGG | 5 cut(s) | 265, 1214, 2675, 3614, 3657 |
| HhaI | GCGC | 5 cut(s) | 1158, 2774, 2931, 4053, 4064 |
| Hin1I | GRCGYC | 1 cut(s) | 3704 |
| Hin6I | GCGC | 5 cut(s) | 1156, 2772, 2929, 4051, 4062 |
| HinP1I | GCGC | 5 cut(s) | 1156, 2772, 2929, 4051, 4062 |
| HincII | GTYRAC | 6 cut(s) | 1668, 1733, 2049, 2089, 2460, 3420 |
| HindII | GTYRAC | 6 cut(s) | 1668, 1733, 2049, 2089, 2460, 3420 |
| HindIII | AAGCTT | 2 cut(s) | 203, 2063 |
| HpaI | GTTAAC | 1 cut(s) | 2049 |
| HpaII | CCGG | 5 cut(s) | 265, 1214, 2675, 3614, 3657 |
| HphI | GGTGA | 6 cut(s) | 208, 787, 1367, 2036, 3844, 4276 |
| HpyCH4III | ACNGT | 5 cut(s) | 970, 1557, 2790, 3451, 3979 |
| HpyCH4IV | ACGT | 7 cut(s) | 946, 1609, 1751, 2684, 2862, 3107, 3704 |
| HpySE526I | ACGT | 7 cut(s) | 946, 1609, 1751, 2684, 2862, 3107, 3704 |
| Hsp92I | GRCGYC | 1 cut(s) | 3704 |
| HspAI | GCGC | 5 cut(s) | 1156, 2772, 2929, 4051, 4062 |
| Kpn2I | TCCGGA | 1 cut(s) | 2674 |
| Ksp22I | TGATCA | 2 cut(s) | 1803, 4180 |
| KspAI | GTTAAC | 1 cut(s) | 2049 |
| KspI | CCGCGG | 1 cut(s) | 3912 |
| LguI | GCTCTTC | 2 cut(s) | 3591, 3624 |
| LmnI | GCTCC | 6 cut(s) | 1981, 2497, 2539, 2879, 3090, 3791 |
| MaeI | CTAG | 9 cut(s) | 429, 1593, 1920, 2667, 2882, 3197, 3308, 3968, 4169 |
| MaeII | ACGT | 7 cut(s) | 946, 1609, 1751, 2684, 2862, 3107, 3704 |
| MaeIII | GTNAC | 8 cut(s) | 797, 937, 950, 2333, 2363, 2863, 3247, 4231 |
| MbiI | CCGCTC | 3 cut(s) | 62, 1551, 3918 |
| MfeI | CAATTG | 7 cut(s) | 278, 1086, 1656, 2522, 3261, 3353, 3880 |
| MflI | RGATCY | 5 cut(s) | 741, 1601, 3651, 3873, 4108 |
| MhlI | GDGCHC | 6 cut(s) | 28, 126, 2536, 3242, 3967, 4045 |
| MlsI | TGGCCA | 2 cut(s) | 602, 2259 |
| MluNI | TGGCCA | 2 cut(s) | 602, 2259 |
| MlyI | GAGTC | 3 cut(s) | 125, 2253, 3320 |
| MmeI | TCCRAC | 5 cut(s) | 219, 1033, 1380, 1441, 4013 |
| Mox20I | TGGCCA | 2 cut(s) | 602, 2259 |
| MroI | TCCGGA | 1 cut(s) | 2674 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3690 |
| MscI | TGGCCA | 2 cut(s) | 602, 2259 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3553 |
| Msp20I | TGGCCA | 2 cut(s) | 602, 2259 |
| MspA1I | CMGCKG | 2 cut(s) | 3333, 3911 |
| MspI | CCGG | 5 cut(s) | 265, 1214, 2675, 3614, 3657 |
| MspR9I | CCNGG | 4 cut(s) | 3614, 3658, 4038, 4213 |
| MunI | CAATTG | 7 cut(s) | 278, 1086, 1656, 2522, 3261, 3353, 3880 |
| Mva1269I | GAATGC | 2 cut(s) | 2017, 2419 |
| MvaI | CCWGG | 2 cut(s) | 4038, 4213 |
| MvnI | CGCG | 2 cut(s) | 163, 3911 |
| NciI | CCSGG | 2 cut(s) | 3614, 3658 |
| NcoI | CCATGG | 2 cut(s) | 2755, 3364 |
| NlaIV | GGNNCC | 3 cut(s) | 2294, 3239, 4044 |
| NmeAIII | GCCGAG | 2 cut(s) | 1674, 2443 |
| NmuCI | GTSAC | 4 cut(s) | 937, 950, 2363, 4231 |
| NsbI | TGCGCA | 2 cut(s) | 2773, 2930 |
| NspI | RCATGY | 8 cut(s) | 227, 1491, 1820, 1838, 1988, 2282, 3519, 3554 |
| NspV | TTCGAA | 1 cut(s) | 1562 |
| PaeI | GCATGC | 1 cut(s) | 227 |
| PagI | TCATGA | 1 cut(s) | 655 |
| PceI | AGGCCT | 1 cut(s) | 2115 |
| PciI | ACATGT | 4 cut(s) | 1816, 2278, 3515, 3550 |
| PciSI | GCTCTTC | 2 cut(s) | 3591, 3624 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2564 |
| PctI | GAATGC | 2 cut(s) | 2017, 2419 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3690 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 577, 2255, 3143 |
| PleI | GAGTC | 3 cut(s) | 124, 2252, 3319 |
| PpsI | GAGTC | 3 cut(s) | 124, 2252, 3319 |
| Ppu21I | YACGTR | 3 cut(s) | 947, 1610, 2863 |
| PscI | ACATGT | 4 cut(s) | 1816, 2278, 3515, 3550 |
| PshBI | ATTAAT | 1 cut(s) | 4155 |
| PsiI | TTATAA | 1 cut(s) | 2942 |
| Psp1406I | AACGTT | 1 cut(s) | 1751 |
| Psp6I | CCWGG | 2 cut(s) | 4036, 4211 |
| PspFI | CCCAGC | 1 cut(s) | 1850 |
| PspGI | CCWGG | 2 cut(s) | 4036, 4211 |
| PspN4I | GGNNCC | 3 cut(s) | 2294, 3239, 4044 |
| PspPI | GGNCC | 5 cut(s) | 1916, 3130, 3584, 3920, 4127 |
| PstI | CTGCAG | 2 cut(s) | 2301, 3873 |
| PsuI | RGATCY | 5 cut(s) | 741, 1601, 3651, 3873, 4108 |
| RsaI | GTAC | 7 cut(s) | 306, 1122, 1509, 2106, 2861, 3277, 3379 |
| RsaNI | GTAC | 7 cut(s) | 305, 1121, 1508, 2105, 2860, 3276, 3378 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3553 |
| SacII | CCGCGG | 1 cut(s) | 3912 |
| SapI | GCTCTTC | 2 cut(s) | 3591, 3624 |
| Sau96I | GGNCC | 5 cut(s) | 1916, 3130, 3584, 3920, 4127 |
| SchI | GAGTC | 3 cut(s) | 125, 2253, 3320 |
| ScrFI | CCNGG | 4 cut(s) | 3614, 3658, 4038, 4213 |
| SduI | GDGCHC | 6 cut(s) | 28, 126, 2536, 3242, 3967, 4045 |
| SfcI | CTRYAG | 5 cut(s) | 1839, 2297, 2595, 3481, 3869 |
| Sfr303I | CCGCGG | 1 cut(s) | 3912 |
| SfuI | TTCGAA | 1 cut(s) | 1562 |
| SgrBI | CCGCGG | 1 cut(s) | 3912 |
| SinI | GGWCC | 2 cut(s) | 3584, 4127 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3553 |
| SnaBI | TACGTA | 1 cut(s) | 2863 |
| SpeI | ACTAGT | 1 cut(s) | 2666 |
| SphI | GCATGC | 1 cut(s) | 227 |
| SseBI | AGGCCT | 1 cut(s) | 2115 |
| SspI | AATATT | 2 cut(s) | 1421, 3015 |
| SspMI | CTAG | 9 cut(s) | 429, 1593, 1920, 2667, 2882, 3197, 3308, 3968, 4169 |
| StuI | AGGCCT | 1 cut(s) | 2115 |
| StyD4I | CCNGG | 4 cut(s) | 3612, 3656, 4036, 4211 |
| StyI | CCWWGG | 6 cut(s) | 919, 1919, 2755, 3142, 3364, 4046 |
| TaaI | ACNGT | 5 cut(s) | 970, 1557, 2790, 3451, 3979 |
| TaiI | ACGT | 7 cut(s) | 949, 1612, 1754, 2687, 2865, 3110, 3707 |
| TaqI | TCGA | 6 cut(s) | 808, 1562, 2055, 2567, 2640, 3499 |
| TatI | WGTACW | 4 cut(s) | 1507, 2104, 3275, 3377 |
| TauI | GCSGC | 4 cut(s) | 62, 1551, 3336, 3921 |
| TscAI | CASTG | 6 cut(s) | 1560, 2013, 2954, 3170, 3532, 3984 |
| TseFI | GTSAC | 4 cut(s) | 937, 950, 2363, 4231 |
| Tsp45I | GTSAC | 4 cut(s) | 937, 950, 2363, 4231 |
| TspGWI | ACGGA | 5 cut(s) | 373, 583, 3338, 3576, 3820 |
| TspRI | CASTG | 6 cut(s) | 1560, 2013, 2954, 3170, 3532, 3984 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 577, 2255, 3143 |
| VpaK11BI | GGWCC | 2 cut(s) | 3584, 4127 |
| VspI | ATTAAT | 1 cut(s) | 4155 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2907 |
| XapI | RAATTY | 7 cut(s) | 8, 1307, 1618, 2139, 3690, 3954, 4206 |
| XbaI | TCTAGA | 2 cut(s) | 2881, 3307 |
| XceI | RCATGY | 8 cut(s) | 227, 1491, 1820, 1838, 1988, 2282, 3519, 3554 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 610, 1390 |
| XmaJI | CCTAGG | 1 cut(s) | 1919 |
| XmiI | GTMKAC | 3 cut(s) | 2071, 2968, 3520 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3690 |
| XspI | CTAG | 9 cut(s) | 429, 1593, 1920, 2667, 2882, 3197, 3308, 3968, 4169 |
| ZraI | GACGTC | 1 cut(s) | 3705 |