disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 97 | 4.9e-18 | Rx N-terminal domain |
| nSTAND1 | PF20703 | 168 - 380 | 1.3e-06 | Novel STAND NTPase 1 |
| nSTAND6 | PF25201 | 174 - 277 | 3.9e-06 | Novel STAND NTPase 6 |
| NB-ARC | PF00931 | 177 - 351 | 3.8e-39 | NB-ARC domain |
| AAA_22 | PF13401 | 199 - 305 | 4.7e-07 | AAA domain |
| WHD_DRP | PF23559 | 437 - 510 | 1.2e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 519 - 774 | 1.2e-26 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 647 - 771 | 2.5e-35 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 989 - 1205 | 9.3e-13 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 1058 - 1179 | 2.2e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_R13L1-DRL21 | PF25019 | 1069 - 1128 | 4.1e-06 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 1116 - 1256 | 6.7e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 1174 - 1265 | 2.1e-07 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1190 - 1255 | 1.7e-07 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 501 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2679 |
| Acc36I | ACCTGC | 1 cut(s) | 1767 |
| Acc65I | GGTACC | 1 cut(s) | 3109 |
| AccB1I | GGYRCC | 2 cut(s) | 2958, 3109 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2101, 2270 |
| AccBSI | CCGCTC | 1 cut(s) | 3801 |
| AccI | GTMKAC | 3 cut(s) | 156, 3046, 3400 |
| AciI | CCGC | 5 cut(s) | 1116, 1183, 1828, 3361, 3801 |
| AclWI | GGATC | 6 cut(s) | 210, 380, 863, 1342, 2341, 2383 |
| AcuI | CTGAAG | 2 cut(s) | 87, 3719 |
| AdeI | CACNNNGTG | 2 cut(s) | 2101, 3212 |
| AflII | CTTAAG | 2 cut(s) | 736, 2564 |
| AflIII | ACRYGT | 2 cut(s) | 166, 1624 |
| AhlI | ACTAGT | 1 cut(s) | 2537 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 623, 655, 3447, 3479 |
| AleI | CACNNNNGTG | 1 cut(s) | 80 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3596, 3628 |
| Alw21I | GWGCWC | 5 cut(s) | 1066, 1163, 2545, 2778, 3244 |
| Alw26I | GTCTC | 5 cut(s) | 971, 1919, 2577, 2930, 3564 |
| Alw44I | GTGCAC | 1 cut(s) | 3240 |
| AlwI | GGATC | 6 cut(s) | 210, 380, 863, 1342, 2341, 2383 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2443 |
| Ama87I | CYCGRG | 1 cut(s) | 921 |
| AoxI | GGCC | 8 cut(s) | 412, 1396, 2087, 2128, 2393, 2992, 3251, 3812 |
| ApaLI | GTGCAC | 1 cut(s) | 3240 |
| ApeKI | GCWGC | 7 cut(s) | 62, 407, 773, 2241, 3363, 3416, 3435 |
| AseI | ATTAAT | 2 cut(s) | 1130, 3836 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 311, 1794, 2259, 3288, 3330, 3573 |
| Asp718I | GGTACC | 1 cut(s) | 3109 |
| AspA2I | CCTAGG | 1 cut(s) | 986 |
| AspLEI | GCGC | 2 cut(s) | 2023, 2464 |
| AspS9I | GGNCC | 5 cut(s) | 413, 1148, 2389, 3251, 3670 |
| AsuC2I | CCSGG | 1 cut(s) | 2906 |
| AsuNHI | GCTAGC | 1 cut(s) | 2206 |
| AvaI | CYCGRG | 1 cut(s) | 921 |
| AvaII | GGWCC | 3 cut(s) | 1148, 2389, 3670 |
| AvrII | CCTAGG | 1 cut(s) | 986 |
| BaeGI | GKGCMC | 3 cut(s) | 2277, 2963, 3244 |
| BanI | GGYRCC | 2 cut(s) | 2958, 3109 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 762, 794 |
| BauI | CACGAG | 2 cut(s) | 80, 3189 |
| BbsI | GAAGAC | 4 cut(s) | 216, 638, 1009, 3030 |
| Bbv12I | GWGCWC | 5 cut(s) | 1066, 1163, 2545, 2778, 3244 |
| BbvI | GCAGC | 7 cut(s) | 49, 419, 760, 2228, 3375, 3428, 3447 |
| BciVI | GTATCC | 2 cut(s) | 429, 2838 |
| BclI | TGATCA | 1 cut(s) | 1818 |
| BcnI | CCSGG | 1 cut(s) | 2906 |
| BcoDI | GTCTC | 5 cut(s) | 971, 1919, 2577, 2930, 3564 |
| BcuI | ACTAGT | 1 cut(s) | 2537 |
| BfmI | CTRYAG | 3 cut(s) | 2805, 2913, 3433 |
| BfoI | RGCGCY | 1 cut(s) | 2465 |
| BfrI | CTTAAG | 2 cut(s) | 736, 2564 |
| BfuAI | ACCTGC | 1 cut(s) | 1767 |
| BfuI | GTATCC | 2 cut(s) | 429, 2838 |
| BglII | AGATCT | 1 cut(s) | 100 |
| BisI | GCNGC | 8 cut(s) | 63, 408, 774, 1829, 2242, 3364, 3417, 3436 |
| BlnI | CCTAGG | 1 cut(s) | 986 |
| BlsI | GCNGC | 8 cut(s) | 64, 409, 775, 1830, 2243, 3365, 3418, 3437 |
| BmcAI | AGTACT | 1 cut(s) | 2268 |
| Bme1390I | CCNGG | 1 cut(s) | 2906 |
| Bme18I | GGWCC | 3 cut(s) | 1148, 2389, 3670 |
| BmeT110I | CYCGRG | 1 cut(s) | 921 |
| BmgT120I | GGNCC | 5 cut(s) | 413, 1148, 2389, 3251, 3670 |
| BmiI | GGNNCC | 3 cut(s) | 1149, 2960, 3111 |
| BmrFI | CCNGG | 1 cut(s) | 2906 |
| BmrI | ACTGGG | 2 cut(s) | 2277, 2541 |
| BmsI | GCATC | 8 cut(s) | 128, 436, 1494, 2795, 2899, 3428, 3668, 3776 |
| BmtI | GCTAGC | 1 cut(s) | 2210 |
| BmuI | ACTGGG | 2 cut(s) | 2277, 2541 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2922 |
| BpiI | GAAGAC | 4 cut(s) | 216, 638, 1009, 3030 |
| BpmI | CTGGAG | 1 cut(s) | 579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1365 |
| BpuEI | CTTGAG | 6 cut(s) | 113, 1613, 1895, 2522, 3539, 3686 |
| BpuMI | CCSGG | 1 cut(s) | 2906 |
| BsaAI | YACGTR | 1 cut(s) | 1625 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3755 |
| BsaI | GGTCTC | 2 cut(s) | 971, 2930 |
| BsaJI | CCNNGG | 3 cut(s) | 45, 986, 2068 |
| BsaWI | WCCGGW | 1 cut(s) | 3403 |
| Bse1I | ACTGG | 6 cut(s) | 596, 1963, 1998, 2264, 2283, 2547 |
| Bse3DI | GCAATG | 2 cut(s) | 333, 2417 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3755 |
| BseDI | CCNNGG | 3 cut(s) | 45, 986, 2068 |
| BseJI | GATNNNNATC | 1 cut(s) | 3755 |
| BseMI | GCAATG | 2 cut(s) | 333, 2417 |
| BseMII | CTCAG | 7 cut(s) | 887, 1379, 1925, 2328, 2450, 2665, 3125 |
| BseNI | ACTGG | 6 cut(s) | 596, 1963, 1998, 2264, 2283, 2547 |
| BseRI | GAGGAG | 5 cut(s) | 5, 545, 1424, 3207, 3809 |
| BseSI | GKGCMC | 3 cut(s) | 2277, 2963, 3244 |
| BseXI | GCAGC | 7 cut(s) | 49, 419, 760, 2228, 3375, 3428, 3447 |
| BsgI | GTGCAG | 1 cut(s) | 3709 |
| BshFI | GGCC | 8 cut(s) | 414, 1398, 2089, 2130, 2395, 2994, 3253, 3814 |
| BshNI | GGYRCC | 2 cut(s) | 2958, 3109 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1066, 1163, 2545, 2778, 3244 |
| BsiHKCI | CYCGRG | 1 cut(s) | 921 |
| BsiSI | CCGG | 4 cut(s) | 2392, 2687, 2906, 3404 |
| BslFI | GGGAC | 4 cut(s) | 1161, 1890, 3015, 3753 |
| BsmAI | GTCTC | 5 cut(s) | 971, 1919, 2577, 2930, 3564 |
| BsmFI | GGGAC | 4 cut(s) | 1161, 1890, 3015, 3753 |
| BsmI | GAATGC | 1 cut(s) | 3491 |
| BsnI | GGCC | 8 cut(s) | 414, 1398, 2089, 2130, 2395, 2994, 3253, 3814 |
| Bso31I | GGTCTC | 2 cut(s) | 971, 2930 |
| BsoBI | CYCGRG | 1 cut(s) | 921 |
| Bsp1286I | GDGCHC | 7 cut(s) | 1066, 1163, 2277, 2545, 2778, 2963, 3244 |
| BspACI | CCGC | 5 cut(s) | 1116, 1183, 1828, 3361, 3801 |
| BspANI | GGCC | 8 cut(s) | 414, 1398, 2089, 2130, 2395, 2994, 3253, 3814 |
| BspCNI | CTCAG | 7 cut(s) | 886, 1378, 1926, 2329, 2449, 2664, 3126 |
| BspHI | TCATGA | 2 cut(s) | 658, 2167 |
| BspLI | GGNNCC | 3 cut(s) | 1149, 2960, 3111 |
| BspMAI | CTGCAG | 1 cut(s) | 3437 |
| BspMI | ACCTGC | 1 cut(s) | 1767 |
| BspOI | GCTAGC | 1 cut(s) | 2210 |
| BspPI | GGATC | 6 cut(s) | 210, 380, 863, 1342, 2341, 2383 |
| BspT107I | GGYRCC | 2 cut(s) | 2958, 3109 |
| BspTI | CTTAAG | 2 cut(s) | 736, 2564 |
| BspTNI | GGTCTC | 2 cut(s) | 971, 2930 |
| BsrBI | CCGCTC | 1 cut(s) | 3801 |
| BsrDI | GCAATG | 2 cut(s) | 333, 2417 |
| BsrI | ACTGG | 6 cut(s) | 596, 1963, 1998, 2264, 2283, 2547 |
| BssECI | CCNNGG | 3 cut(s) | 45, 986, 2068 |
| BssSI | CACGAG | 2 cut(s) | 80, 3189 |
| BssT1I | CCWWGG | 3 cut(s) | 45, 986, 2068 |
| Bst2BI | CACGAG | 2 cut(s) | 80, 3189 |
| Bst6I | CTCTTC | 4 cut(s) | 879, 1785, 3183, 3294 |
| BstAFI | CTTAAG | 2 cut(s) | 736, 2564 |
| BstBAI | YACGTR | 1 cut(s) | 1625 |
| BstC8I | GCNNGC | 6 cut(s) | 60, 117, 412, 622, 2208, 2603 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1392 |
| BstH2I | RGCGCY | 1 cut(s) | 2465 |
| BstHHI | GCGC | 2 cut(s) | 2023, 2464 |
| BstMAI | GTCTC | 5 cut(s) | 971, 1919, 2577, 2930, 3564 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 224, 2027, 2086 |
| BstNSI | RCATGY | 3 cut(s) | 119, 170, 2605 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2922 |
| BstSCI | CCNGG | 1 cut(s) | 2904 |
| BstSFI | CTRYAG | 3 cut(s) | 2805, 2913, 3433 |
| BstSLI | GKGCMC | 3 cut(s) | 2277, 2963, 3244 |
| BstV1I | GCAGC | 7 cut(s) | 49, 419, 760, 2228, 3375, 3428, 3447 |
| BstV2I | GAAGAC | 4 cut(s) | 216, 638, 1009, 3030 |
| BstX2I | RGATCY | 4 cut(s) | 100, 202, 868, 2333 |
| BstYI | RGATCY | 4 cut(s) | 100, 202, 868, 2333 |
| BsuI | GTATCC | 2 cut(s) | 429, 2838 |
| BsuRI | GGCC | 8 cut(s) | 414, 1398, 2089, 2130, 2395, 2994, 3253, 3814 |
| BtsI | GCAGTG | 2 cut(s) | 2776, 3229 |
| BtsIMutI | CAGTG | 4 cut(s) | 583, 2521, 2776, 3229 |
| BveI | ACCTGC | 1 cut(s) | 1767 |
| Cac8I | GCNNGC | 6 cut(s) | 60, 117, 412, 622, 2208, 2603 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2443 |
| CciI | TCATGA | 2 cut(s) | 658, 2167 |
| CfoI | GCGC | 2 cut(s) | 2023, 2464 |
| Cfr13I | GGNCC | 5 cut(s) | 413, 1148, 2389, 3251, 3670 |
| CseI | GACGC | 2 cut(s) | 276, 1472 |
| DraI | TTTAAA | 6 cut(s) | 349, 1432, 1615, 1959, 2727, 2895 |
| DraIII | CACNNNGTG | 2 cut(s) | 2101, 3212 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2679 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2679 |
| Eam1104I | CTCTTC | 4 cut(s) | 879, 1785, 3183, 3294 |
| EarI | CTCTTC | 4 cut(s) | 879, 1785, 3183, 3294 |
| Eco130I | CCWWGG | 3 cut(s) | 45, 986, 2068 |
| Eco147I | AGGCCT | 3 cut(s) | 1398, 2130, 2994 |
| Eco31I | GGTCTC | 2 cut(s) | 971, 2930 |
| Eco47I | GGWCC | 3 cut(s) | 1148, 2389, 3670 |
| Eco57I | CTGAAG | 2 cut(s) | 87, 3719 |
| Eco88I | CYCGRG | 1 cut(s) | 921 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1392 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1148, 3670 |
| EcoRI | GAATTC | 2 cut(s) | 71, 2171 |
| EcoT14I | CCWWGG | 3 cut(s) | 45, 986, 2068 |
| EcoT22I | ATGCAT | 2 cut(s) | 121, 3493 |
| ErhI | CCWWGG | 3 cut(s) | 45, 986, 2068 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 719, 751, 1328, 1360, 2498, 2530 |
| FaqI | GGGAC | 4 cut(s) | 1161, 1890, 3015, 3753 |
| FauI | CCCGC | 1 cut(s) | 3794 |
| FbaI | TGATCA | 1 cut(s) | 1818 |
| FblI | GTMKAC | 3 cut(s) | 156, 3046, 3400 |
| Fnu4HI | GCNGC | 8 cut(s) | 63, 408, 774, 1829, 2242, 3364, 3417, 3436 |
| Fsp4HI | GCNGC | 8 cut(s) | 63, 408, 774, 1829, 2242, 3364, 3417, 3436 |
| GlaI | GCGC | 2 cut(s) | 2022, 2463 |
| GluI | GCNGC | 8 cut(s) | 63, 408, 774, 1829, 2242, 3364, 3417, 3436 |
| GsuI | CTGGAG | 1 cut(s) | 579 |
| HaeII | RGCGCY | 1 cut(s) | 2465 |
| HaeIII | GGCC | 8 cut(s) | 414, 1398, 2089, 2130, 2395, 2994, 3253, 3814 |
| HapII | CCGG | 4 cut(s) | 2392, 2687, 2906, 3404 |
| HgaI | GACGC | 2 cut(s) | 276, 1472 |
| HhaI | GCGC | 2 cut(s) | 2023, 2464 |
| Hin6I | GCGC | 2 cut(s) | 2021, 2462 |
| HinP1I | GCGC | 2 cut(s) | 2021, 2462 |
| HincII | GTYRAC | 4 cut(s) | 157, 906, 2362, 2751 |
| HindII | GTYRAC | 4 cut(s) | 157, 906, 2362, 2751 |
| HindIII | AAGCTT | 1 cut(s) | 2078 |
| HpaI | GTTAAC | 1 cut(s) | 2362 |
| HpaII | CCGG | 4 cut(s) | 2392, 2687, 2906, 3404 |
| Hpy99I | CGWCG | 1 cut(s) | 270 |
| HpyCH4IV | ACGT | 2 cut(s) | 1624, 3130 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 224, 2027, 2086 |
| HpySE526I | ACGT | 2 cut(s) | 1624, 3130 |
| HspAI | GCGC | 2 cut(s) | 2021, 2462 |
| KpnI | GGTACC | 1 cut(s) | 3113 |
| Ksp22I | TGATCA | 1 cut(s) | 1818 |
| KspAI | GTTAAC | 1 cut(s) | 2362 |
| LmnI | GCTCC | 5 cut(s) | 861, 1069, 1166, 2548, 3489 |
| Lsp1109I | GCAGC | 7 cut(s) | 49, 419, 760, 2228, 3375, 3428, 3447 |
| LweI | GCATC | 8 cut(s) | 128, 436, 1494, 2795, 2899, 3428, 3668, 3776 |
| MaeII | ACGT | 2 cut(s) | 1624, 3130 |
| MaeIII | GTNAC | 8 cut(s) | 178, 940, 953, 1489, 2525, 2885, 3212, 3423 |
| MbiI | CCGCTC | 1 cut(s) | 3801 |
| MfeI | CAATTG | 4 cut(s) | 1188, 1671, 1740, 3462 |
| MflI | RGATCY | 4 cut(s) | 100, 202, 868, 2333 |
| MhlI | GDGCHC | 7 cut(s) | 1066, 1163, 2277, 2545, 2778, 2963, 3244 |
| MlyI | GAGTC | 2 cut(s) | 2746, 3167 |
| MmeI | TCCRAC | 5 cut(s) | 289, 1375, 2679, 3172, 3786 |
| Mph1103I | ATGCAT | 2 cut(s) | 121, 3493 |
| MroXI | GAANNNNTTC | 6 cut(s) | 311, 1794, 2259, 3288, 3330, 3573 |
| MslI | CAYNNNNRTG | 3 cut(s) | 80, 165, 684 |
| MspA1I | CMGCKG | 1 cut(s) | 410 |
| MspCI | CTTAAG | 2 cut(s) | 736, 2564 |
| MspI | CCGG | 4 cut(s) | 2392, 2687, 2906, 3404 |
| MspR9I | CCNGG | 1 cut(s) | 2906 |
| MssI | GTTTAAAC | 1 cut(s) | 1959 |
| MunI | CAATTG | 4 cut(s) | 1188, 1671, 1740, 3462 |
| Mva1269I | GAATGC | 1 cut(s) | 3491 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 224, 2027, 2086 |
| NciI | CCSGG | 1 cut(s) | 2906 |
| NheI | GCTAGC | 1 cut(s) | 2206 |
| NlaIV | GGNNCC | 3 cut(s) | 1149, 2960, 3111 |
| NmuCI | GTSAC | 6 cut(s) | 178, 953, 2525, 2885, 3212, 3423 |
| NsiI | ATGCAT | 2 cut(s) | 121, 3493 |
| NspI | RCATGY | 3 cut(s) | 119, 170, 2605 |
| OliI | CACNNNNGTG | 1 cut(s) | 80 |
| PaeI | GCATGC | 2 cut(s) | 119, 2605 |
| PaeR7I | CTCGAG | 1 cut(s) | 921 |
| PagI | TCATGA | 2 cut(s) | 658, 2167 |
| PceI | AGGCCT | 3 cut(s) | 1398, 2130, 2994 |
| PciI | ACATGT | 1 cut(s) | 166 |
| PctI | GAATGC | 1 cut(s) | 3491 |
| PdmI | GAANNNNTTC | 6 cut(s) | 311, 1794, 2259, 3288, 3330, 3573 |
| PflFI | GACNNNGTC | 1 cut(s) | 565 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2101, 2270 |
| PfoI | TCCNGGA | 1 cut(s) | 2904 |
| PkrI | GCNGC | 8 cut(s) | 64, 409, 775, 1830, 2243, 3365, 3418, 3437 |
| PleI | GAGTC | 2 cut(s) | 2746, 3167 |
| PmeI | GTTTAAAC | 1 cut(s) | 1959 |
| PpsI | GAGTC | 2 cut(s) | 2746, 3167 |
| Ppu21I | YACGTR | 1 cut(s) | 1625 |
| PpuMI | RGGWCCY | 2 cut(s) | 1148, 3670 |
| PscI | ACATGT | 1 cut(s) | 166 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2922 |
| PshBI | ATTAAT | 2 cut(s) | 1130, 3836 |
| PsiI | TTATAA | 1 cut(s) | 501 |
| Psp5II | RGGWCCY | 2 cut(s) | 1148, 3670 |
| PspN4I | GGNNCC | 3 cut(s) | 1149, 2960, 3111 |
| PspPI | GGNCC | 5 cut(s) | 413, 1148, 2389, 3251, 3670 |
| PspPPI | RGGWCCY | 2 cut(s) | 1148, 3670 |
| PspXI | VCTCGAGB | 1 cut(s) | 921 |
| PstI | CTGCAG | 1 cut(s) | 3437 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2443 |
| PsuI | RGATCY | 4 cut(s) | 100, 202, 868, 2333 |
| PsyI | GACNNNGTC | 1 cut(s) | 565 |
| PvuII | CAGCTG | 1 cut(s) | 410 |
| RseI | CAYNNNNRTG | 3 cut(s) | 80, 165, 684 |
| SalI | GTCGAC | 1 cut(s) | 155 |
| SatI | GCNGC | 8 cut(s) | 63, 408, 774, 1829, 2242, 3364, 3417, 3436 |
| Sau96I | GGNCC | 5 cut(s) | 413, 1148, 2389, 3251, 3670 |
| ScaI | AGTACT | 1 cut(s) | 2268 |
| SchI | GAGTC | 2 cut(s) | 2746, 3167 |
| ScrFI | CCNGG | 1 cut(s) | 2906 |
| SduI | GDGCHC | 7 cut(s) | 1066, 1163, 2277, 2545, 2778, 2963, 3244 |
| SfaNI | GCATC | 8 cut(s) | 128, 436, 1494, 2795, 2899, 3428, 3668, 3776 |
| SfcI | CTRYAG | 3 cut(s) | 2805, 2913, 3433 |
| Sfr274I | CTCGAG | 1 cut(s) | 921 |
| SinI | GGWCC | 3 cut(s) | 1148, 2389, 3670 |
| SlaI | CTCGAG | 1 cut(s) | 921 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 80, 165, 684 |
| SmlI | CTYRAG | 9 cut(s) | 128, 736, 921, 1592, 1910, 2501, 2564, 3554, 3665 |
| SmoI | CTYRAG | 9 cut(s) | 128, 736, 921, 1592, 1910, 2501, 2564, 3554, 3665 |
| SpeI | ACTAGT | 1 cut(s) | 2537 |
| SphI | GCATGC | 2 cut(s) | 119, 2605 |
| SseBI | AGGCCT | 3 cut(s) | 1398, 2130, 2994 |
| SsiI | CCGC | 5 cut(s) | 1116, 1183, 1828, 3361, 3801 |
| SspI | AATATT | 3 cut(s) | 654, 1427, 1872 |
| StuI | AGGCCT | 3 cut(s) | 1398, 2130, 2994 |
| StyD4I | CCNGG | 1 cut(s) | 2904 |
| StyI | CCWWGG | 3 cut(s) | 45, 986, 2068 |
| TaiI | ACGT | 2 cut(s) | 1627, 3133 |
| TaqI | TCGA | 4 cut(s) | 156, 172, 922, 3126 |
| TaqII | GACCGA | 1 cut(s) | 1884 |
| TatI | WGTACW | 6 cut(s) | 844, 2119, 2266, 2898, 3137, 3625 |
| TauI | GCSGC | 1 cut(s) | 1831 |
| TscAI | CASTG | 4 cut(s) | 583, 2528, 2783, 3236 |
| TseFI | GTSAC | 6 cut(s) | 178, 953, 2525, 2885, 3212, 3423 |
| TseI | GCWGC | 7 cut(s) | 62, 407, 773, 2241, 3363, 3416, 3435 |
| Tsp45I | GTSAC | 6 cut(s) | 178, 953, 2525, 2885, 3212, 3423 |
| TspGWI | ACGGA | 3 cut(s) | 272, 3200, 3806 |
| TspRI | CASTG | 4 cut(s) | 583, 2528, 2783, 3236 |
| Tth111I | GACNNNGTC | 1 cut(s) | 565 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2101, 2270 |
| Vha464I | CTTAAG | 2 cut(s) | 736, 2564 |
| VneI | GTGCAC | 1 cut(s) | 3240 |
| VpaK11BI | GGWCC | 3 cut(s) | 1148, 2389, 3670 |
| VspI | ATTAAT | 2 cut(s) | 1130, 3836 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1392 |
| XbaI | TCTAGA | 3 cut(s) | 3169, 3322, 3775 |
| XceI | RCATGY | 3 cut(s) | 119, 170, 2605 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2363 |
| XhoI | CTCGAG | 1 cut(s) | 921 |
| XmaJI | CCTAGG | 1 cut(s) | 986 |
| XmiI | GTMKAC | 3 cut(s) | 156, 3046, 3400 |
| XmnI | GAANNNNTTC | 6 cut(s) | 311, 1794, 2259, 3288, 3330, 3573 |
| ZrmI | AGTACT | 1 cut(s) | 2268 |
| Zsp2I | ATGCAT | 2 cut(s) | 121, 3493 |