RchiOBHm_Chr4g0414181

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
38562902 .. 38564818
1917 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38462

Sequence Viewer

Length: 1875 bp
ATGCAGGTTTTGGGAGGCATAATGCGTTCTAAAACTAGTAGAGATGATTGGTTGTCAATTCAAGAAAGTGAAATATGGAAACTACCTAAAGCAGAGGATAAAATCATGTTGGTATTGAAGTTGAGTTTTGATAATTTGAAGTCACCGCCTTTGAAGCAATGTTTTGCATATTGCTCGCTGTTGAGGAAAGATTTTGAAATTGAAAGAGATAATTTGATCCAACTTTGGATGGCTCAGGGATTACTCCAACCTTCAACCGACAAAATTCATCATGAAATAGAGGACACGGGCGATGAGTATTTTAGTATTCTATTGAAAAATTCCTTATTTCAAGAGGTAACTGAAGGTGGCAGTATTACCAAGTACACAATGCACGATCTTGTGCATGATCTAGCAGAAGAAGTATCCAAAAGTGAGAGCTTGACACGAGATTTGAAAGATAAATGTGGGGTTCGACATGTTGCGCATATTCCTACTTCAACACTAGCAAACATGTCAGAAGTAACTGTTGGGAGATTGCACTCACTATTTTCAAATGATCAGGTCCCAGATATCATTTTCTCCAAGTTTAGAGCATTGCGGGTCTTAAGTTTACAAGAGGCAAAAATTCAAGAGTTGTCAAATTCATTTGGCAAGATGAAGCACTTGAGGTATCTAGACATCTCGTATACAGGAATCAAAGCACTTCCCAAGTCAATTGGCAAGCTGTATAACCTTCAAACATTGAGAATGCAGGAAACTGATTATCTCAAAGAGGTTCCAAGGGAAATGCAAAACTTGATCAACTTGAGGCATCTTTATTTTGATAAGACAATGGAATTTCCAGCCGGATTATTGCGGGGATTAACTAATCTCCGAACATTGTCTTACTTTAATGTGGGTAAGGAGATGGGTGTTGGAATTGAGGAATTGGTTGGCTTGAACCACTTGAAAGGTGAATTAATCATTCGTAATCTGGAAAATATAAGGGATGAAGAAGAAGCGAAGAAGGCAAAATTAGAGGACAAGAAAAATGTACTGGAGCTAAGTTATGTATGGGCAAGAAGCAGAAGCAATCCAGAAGGTTTGGAGAGTAGGCCAAGCAGCGACTTTCATGACGAGAATGTACTAGAAGGACTCAAACCACATACCAAGTTGGAGAGCTTGAGCATTGAAAACTTCATGGGTGATAAATTTCCTTCATGGATGATGAGAAACCCTTTGCCTCTCAACAATTTGAAGAAGGTCCTCCTTTTTGGCTGTCGCAGATGCGAAGGGCTCCCAATACTAGGCCATCTACCGGGTCTTGGACATGTCGAGATTTCTGGAATGCATAACCTAAAACTCTTGGGAAGTGAATTTTATGGTTACAATCATGTTTACGAGGCTGCTGTGGCTACCCGAGAGAAGGTCTTATTTCCAGCACTGAAAACATTAAGCATTGTAGGGTGCGGTGAGCTAACTGAATGGATGGAAGCACCCACAACGATGACATCGTCAACAAGTAAAGTAGTGGTGTTCCCTTGCTTGGAGGAGTTGGCTCTCGGGGGTTGTCCCTTATTGAGAAATGCTCCAAGTCATTTCCCATCTCTCAAGGAGTTGTGGATATGGGTCATGGGCAGCGAGAAGCCGATGGCAAGTATATGCAATGAAGTGAGCACTCTGACTTCTCTCTATATAGAAAAAATCAAGGGGCTTACTTCGCTGTCCTCAGGGATGCTGAAGAAGAACAAGAATCTCACATCTTTGGTGATCTGGAGTTGTGATGAGATGATTCATATTGCTCCAAATGTATTTGGCTGCTGCGCAAATCTTAGGGAGCTGACCATTGGGGGTTGTAAAAAACTGGAGCAGCTAGCCGAGGGTCTAGACACGCTCCCTCTTCTCAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

624

Amino Acids

70.59

Weight (kDa)

6.55

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 63 - 132 3.3e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 185 - 475 1.9e-32 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 301 - 437 1.5e-33 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 465, 1786
AccI GTMKAC 1 cut(s) 668
AciI CCGC 4 cut(s) 146, 580, 838, 1431
AclWI GGATC 1 cut(s) 211
AcsI RAATTY 7 cut(s) 264, 319, 606, 622, 818, 1172, 1337
AcuI CTGAAG 2 cut(s) 363, 1721
AfaI GTAC 3 cut(s) 365, 1017, 1107
AfiI CCNNNNNNNGG 5 cut(s) 1268, 1279, 1286, 1387, 1507
AflII CTTAAG 1 cut(s) 586
AflIII ACRYGT 3 cut(s) 457, 492, 1291
AhlI ACTAGT 1 cut(s) 35
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
AluBI AGCT 7 cut(s) 420, 706, 1024, 1143, 1438, 1801, 1834
AluI AGCT 7 cut(s) 420, 706, 1024, 1143, 1438, 1801, 1834
Alw21I GWGCWC 1 cut(s) 1640
AlwI GGATC 1 cut(s) 211
Ama87I CYCGRG 2 cut(s) 1380, 1523
AoxI GGCC 2 cut(s) 1076, 1270
ApeKI GCWGC 6 cut(s) 1083, 1367, 1599, 1779, 1782, 1831
ApoI RAATTY 7 cut(s) 264, 319, 606, 622, 818, 1172, 1337
ArsI GACNNNNNNTTYG 2 cut(s) 415, 447
AseI ATTAAT 1 cut(s) 941
AspLEI GCGC 2 cut(s) 466, 1787
AspS9I GGNCC 2 cut(s) 544, 1225
AsuC2I CCSGG 1 cut(s) 1281
AsuHPI GGTGA 5 cut(s) 135, 947, 1178, 1445, 1741
AsuNHI GCTAGC 1 cut(s) 1834
AvaI CYCGRG 2 cut(s) 1380, 1523
AvaII GGWCC 2 cut(s) 544, 1225
AxyI CCTNAGG 1 cut(s) 1690
BanII GRGCYC 1 cut(s) 1260
BauI CACGAG 1 cut(s) 426
Bbv12I GWGCWC 1 cut(s) 1640
BbvI GCAGC 6 cut(s) 1095, 1354, 1611, 1766, 1769, 1843
BccI CCATC 6 cut(s) 223, 883, 1281, 1444, 1573, 1606
BcgI CGANNNNNNTGC 2 cut(s) 156, 190
BciVI GTATCC 1 cut(s) 415
BclI TGATCA 2 cut(s) 538, 780
BcnI CCSGG 1 cut(s) 1281
BcuI ACTAGT 1 cut(s) 35
BfaI CTAG 8 cut(s) 36, 392, 485, 656, 1109, 1268, 1835, 1847
BfrI CTTAAG 1 cut(s) 586
BfuI GTATCC 1 cut(s) 415
BisI GCNGC 6 cut(s) 1084, 1368, 1600, 1780, 1783, 1832
BlsI GCNGC 6 cut(s) 1085, 1369, 1601, 1781, 1784, 1833
Bme1390I CCNGG 1 cut(s) 1281
Bme18I GGWCC 2 cut(s) 544, 1225
BmeT110I CYCGRG 2 cut(s) 1380, 1523
BmgT120I GGNCC 2 cut(s) 544, 1225
BmiI GGNNCC 3 cut(s) 546, 759, 1259
BmrFI CCNGG 1 cut(s) 1281
BmsI GCATC 3 cut(s) 802, 1238, 1686
BmtI GCTAGC 1 cut(s) 1838
BplI GAGNNNNNCTC 2 cut(s) 1534, 1566
BpmI CTGGAG 3 cut(s) 1040, 1756, 1847
Bpu10I CCTNAGC 1 cut(s) 234
BpuEI CTTGAG 4 cut(s) 667, 808, 1165, 1556
BpuMI CCSGG 1 cut(s) 1281
BsaJI CCNNGG 2 cut(s) 761, 1839
Bsc4I CCNNNNNNNGG 5 cut(s) 1268, 1279, 1286, 1387, 1507
Bse1I ACTGG 2 cut(s) 1023, 1830
Bse21I CCTNAGG 1 cut(s) 1690
Bse3DI GCAATG 3 cut(s) 164, 575, 1633
BseDI CCNNGG 2 cut(s) 761, 1839
BseGI GGATG 5 cut(s) 234, 976, 1191, 1455, 1701
BseLI CCNNNNNNNGG 5 cut(s) 1268, 1279, 1286, 1387, 1507
BseMI GCAATG 3 cut(s) 164, 575, 1633
BseMII CTCAG 2 cut(s) 248, 1704
BseNI ACTGG 2 cut(s) 1023, 1830
BseRI GAGGAG 1 cut(s) 1526
BseXI GCAGC 6 cut(s) 1095, 1354, 1611, 1766, 1769, 1843
BshFI GGCC 2 cut(s) 1078, 1272
BsiHKAI GWGCWC 1 cut(s) 1640
BsiHKCI CYCGRG 2 cut(s) 1380, 1523
BsiSI CCGG 2 cut(s) 828, 1280
BslFI GGGAC 2 cut(s) 530, 1518
BslI CCNNNNNNNGG 5 cut(s) 1268, 1279, 1286, 1387, 1507
BsmFI GGGAC 2 cut(s) 530, 1518
BsmI GAATGC 2 cut(s) 735, 1314
BsnI GGCC 2 cut(s) 1078, 1272
BsoBI CYCGRG 2 cut(s) 1380, 1523
Bsp1286I GDGCHC 2 cut(s) 1260, 1640
Bsp143I GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
BspACI CCGC 4 cut(s) 146, 580, 838, 1431
BspANI GGCC 2 cut(s) 1078, 1272
BspCNI CTCAG 2 cut(s) 247, 1703
BspHI TCATGA 2 cut(s) 271, 1093
BspLI GGNNCC 3 cut(s) 546, 759, 1259
BspOI GCTAGC 1 cut(s) 1838
BspPI GGATC 1 cut(s) 211
BspTI CTTAAG 1 cut(s) 586
BsrDI GCAATG 3 cut(s) 164, 575, 1633
BsrI ACTGG 2 cut(s) 1023, 1830
BssECI CCNNGG 2 cut(s) 761, 1839
BssMI GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
BssNAI GTATAC 1 cut(s) 669
BssSI CACGAG 1 cut(s) 426
BssT1I CCWWGG 1 cut(s) 761
Bst1107I GTATAC 1 cut(s) 669
Bst2BI CACGAG 1 cut(s) 426
Bst4CI ACNGT 1 cut(s) 508
Bst6I CTCTTC 1 cut(s) 1866
BstAFI CTTAAG 1 cut(s) 586
BstC8I GCNNGC 3 cut(s) 176, 704, 1836
BstDEI CTNAG 5 cut(s) 234, 1025, 1690, 1793, 1865
BstF5I GGATG 5 cut(s) 234, 976, 1191, 1455, 1701
BstHHI GCGC 2 cut(s) 466, 1787
BstKTI GATC 6 cut(s) 219, 379, 391, 541, 783, 1734
BstMBI GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
BstMWI GCNNNNNNNGC 4 cut(s) 154, 989, 1373, 1681
BstNSI RCATGY 3 cut(s) 461, 496, 1295
BstSCI CCNGG 1 cut(s) 1279
BstV1I GCAGC 6 cut(s) 1095, 1354, 1611, 1766, 1769, 1843
BstZ17I GTATAC 1 cut(s) 669
Bsu36I CCTNAGG 1 cut(s) 1690
BsuI GTATCC 1 cut(s) 415
BsuRI GGCC 2 cut(s) 1078, 1272
BtgZI GCGATG 1 cut(s) 306
BtsCI GGATG 5 cut(s) 234, 976, 1191, 1455, 1701
BtsIMutI CAGTG 1 cut(s) 1403
Cac8I GCNNGC 3 cut(s) 176, 704, 1836
CciI TCATGA 2 cut(s) 271, 1093
CfoI GCGC 2 cut(s) 466, 1787
Cfr13I GGNCC 2 cut(s) 544, 1225
Csp6I GTAC 3 cut(s) 364, 1016, 1106
CviQI GTAC 3 cut(s) 364, 1016, 1106
DdeI CTNAG 5 cut(s) 234, 1025, 1690, 1793, 1865
DpnI GATC 6 cut(s) 218, 378, 390, 540, 782, 1733
DpnII GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
Eam1104I CTCTTC 1 cut(s) 1866
EarI CTCTTC 1 cut(s) 1866
Eco130I CCWWGG 1 cut(s) 761
Eco24I GRGCYC 1 cut(s) 1260
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 2 cut(s) 544, 1225
Eco57I CTGAAG 2 cut(s) 363, 1721
Eco81I CCTNAGG 1 cut(s) 1690
Eco88I CYCGRG 2 cut(s) 1380, 1523
EcoO109I RGGNCCY 2 cut(s) 544, 1225
EcoRV GATATC 1 cut(s) 553
EcoT14I CCWWGG 1 cut(s) 761
EcoT22I ATGCAT 1 cut(s) 1314
EcoT38I GRGCYC 1 cut(s) 1260
ErhI CCWWGG 1 cut(s) 761
FaqI GGGAC 2 cut(s) 530, 1518
FauI CCCGC 2 cut(s) 573, 831
FbaI TGATCA 2 cut(s) 538, 780
FblI GTMKAC 1 cut(s) 668
Fnu4HI GCNGC 6 cut(s) 1084, 1368, 1600, 1780, 1783, 1832
FokI GGATG 5 cut(s) 241, 983, 1198, 1462, 1708
FriOI GRGCYC 1 cut(s) 1260
Fsp4HI GCNGC 6 cut(s) 1084, 1368, 1600, 1780, 1783, 1832
FspBI CTAG 8 cut(s) 36, 392, 485, 656, 1109, 1268, 1835, 1847
FspI TGCGCA 2 cut(s) 465, 1786
GlaI GCGC 2 cut(s) 465, 1786
GluI GCNGC 6 cut(s) 1084, 1368, 1600, 1780, 1783, 1832
GsuI CTGGAG 3 cut(s) 1040, 1756, 1847
HaeIII GGCC 2 cut(s) 1078, 1272
HapII CCGG 2 cut(s) 828, 1280
HhaI GCGC 2 cut(s) 466, 1787
Hin6I GCGC 2 cut(s) 464, 1785
HinP1I GCGC 2 cut(s) 464, 1785
HincII GTYRAC 1 cut(s) 1479
HindII GTYRAC 1 cut(s) 1479
HinfI GANTC 4 cut(s) 675, 1116, 1714, 1753
HpaII CCGG 2 cut(s) 828, 1280
HphI GGTGA 5 cut(s) 135, 947, 1178, 1445, 1741
Hpy166II GTNNAC 5 cut(s) 366, 593, 669, 1360, 1479
Hpy188I TCNGA 4 cut(s) 499, 857, 1644, 1868
Hpy8I GTNNAC 5 cut(s) 366, 593, 669, 1360, 1479
HpyCH4III ACNGT 1 cut(s) 508
HpyCH4V TGCA 9 cut(s) 4, 167, 373, 385, 520, 733, 772, 1312, 1626
HpyF10VI GCNNNNNNNGC 4 cut(s) 154, 989, 1373, 1681
HpyF3I CTNAG 5 cut(s) 234, 1025, 1690, 1793, 1865
HspAI GCGC 2 cut(s) 464, 1785
Ksp22I TGATCA 2 cut(s) 538, 780
Kzo9I GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
LmnI GCTCC 7 cut(s) 1021, 1263, 1555, 1768, 1798, 1828, 1860
Lsp1109I GCAGC 6 cut(s) 1095, 1354, 1611, 1766, 1769, 1843
LweI GCATC 3 cut(s) 802, 1238, 1686
MaeI CTAG 8 cut(s) 36, 392, 485, 656, 1109, 1268, 1835, 1847
MaeIII GTNAC 4 cut(s) 141, 337, 502, 1346
MalI GATC 6 cut(s) 218, 378, 390, 540, 782, 1733
MboI GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
MboII GAAGA 8 cut(s) 410, 986, 989, 997, 1231, 1714, 1717, 1853
MfeI CAATTG 1 cut(s) 696
MhlI GDGCHC 2 cut(s) 1260, 1640
MlyI GAGTC 1 cut(s) 1110
MmeI TCCRAC 4 cut(s) 244, 271, 877, 1116
Mph1103I ATGCAT 1 cut(s) 1314
MseI TTAA 5 cut(s) 587, 845, 873, 941, 1415
MslI CAYNNNNRTG 1 cut(s) 1466
MspCI CTTAAG 1 cut(s) 586
MspI CCGG 2 cut(s) 828, 1280
MspR9I CCNGG 1 cut(s) 1281
MunI CAATTG 1 cut(s) 696
Mva1269I GAATGC 2 cut(s) 735, 1314
MwoI GCNNNNNNNGC 4 cut(s) 154, 989, 1373, 1681
NciI CCSGG 1 cut(s) 1281
NdeII GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
NheI GCTAGC 1 cut(s) 1834
NlaIV GGNNCC 3 cut(s) 546, 759, 1259
NmeAIII GCCGAG 1 cut(s) 1864
NmuCI GTSAC 1 cut(s) 141
NsbI TGCGCA 2 cut(s) 465, 1786
NsiI ATGCAT 1 cut(s) 1314
NspI RCATGY 3 cut(s) 461, 496, 1295
PagI TCATGA 2 cut(s) 271, 1093
PciI ACATGT 3 cut(s) 457, 492, 1291
PcsI WCGNNNNNNNCGW 1 cut(s) 1472
PctI GAATGC 2 cut(s) 735, 1314
PfeI GAWTC 3 cut(s) 675, 1714, 1753
PflFI GACNNNGTC 1 cut(s) 1474
PkrI GCNGC 6 cut(s) 1085, 1369, 1601, 1781, 1784, 1833
PleI GAGTC 1 cut(s) 1110
PpsI GAGTC 1 cut(s) 1110
PpuMI RGGWCCY 2 cut(s) 544, 1225
PscI ACATGT 3 cut(s) 457, 492, 1291
PshBI ATTAAT 1 cut(s) 941
Psp5II RGGWCCY 2 cut(s) 544, 1225
PspN4I GGNNCC 3 cut(s) 546, 759, 1259
PspPI GGNCC 2 cut(s) 544, 1225
PspPPI RGGWCCY 2 cut(s) 544, 1225
PsyI GACNNNGTC 1 cut(s) 1474
RsaI GTAC 3 cut(s) 365, 1017, 1107
RsaNI GTAC 3 cut(s) 364, 1016, 1106
RseI CAYNNNNRTG 1 cut(s) 1466
SaqAI TTAA 5 cut(s) 587, 845, 873, 941, 1415
SatI GCNGC 6 cut(s) 1084, 1368, 1600, 1780, 1783, 1832
Sau3AI GATC 6 cut(s) 216, 376, 388, 538, 780, 1731
Sau96I GGNCC 2 cut(s) 544, 1225
SchI GAGTC 1 cut(s) 1110
ScrFI CCNGG 1 cut(s) 1281
SduI GDGCHC 2 cut(s) 1260, 1640
SfaNI GCATC 3 cut(s) 802, 1238, 1686
SinI GGWCC 2 cut(s) 544, 1225
SmiMI CAYNNNNRTG 1 cut(s) 1466
SmlI CTYRAG 5 cut(s) 586, 646, 787, 1144, 1571
SmoI CTYRAG 5 cut(s) 586, 646, 787, 1144, 1571
SpeI ACTAGT 1 cut(s) 35
SsiI CCGC 4 cut(s) 146, 580, 838, 1431
SspMI CTAG 8 cut(s) 36, 392, 485, 656, 1109, 1268, 1835, 1847
StyD4I CCNGG 1 cut(s) 1279
StyI CCWWGG 1 cut(s) 761
TaaI ACNGT 1 cut(s) 508
TaqI TCGA 2 cut(s) 454, 1296
TatI WGTACW 3 cut(s) 363, 1015, 1105
TfiI GAWTC 3 cut(s) 675, 1714, 1753
Tru1I TTAA 5 cut(s) 587, 845, 873, 941, 1415
Tru9I TTAA 5 cut(s) 587, 845, 873, 941, 1415
TscAI CASTG 1 cut(s) 1410
TseFI GTSAC 1 cut(s) 141
TseI GCWGC 6 cut(s) 1083, 1367, 1599, 1779, 1782, 1831
Tsp45I GTSAC 1 cut(s) 141
TspRI CASTG 1 cut(s) 1410
Tth111I GACNNNGTC 1 cut(s) 1474
Vha464I CTTAAG 1 cut(s) 586
VpaK11BI GGWCC 2 cut(s) 544, 1225
VspI ATTAAT 1 cut(s) 941
XapI RAATTY 7 cut(s) 264, 319, 606, 622, 818, 1172, 1337
XbaI TCTAGA 2 cut(s) 655, 1846
XceI RCATGY 3 cut(s) 461, 496, 1295
XmiI GTMKAC 1 cut(s) 668
XspI CTAG 8 cut(s) 36, 392, 485, 656, 1109, 1268, 1835, 1847
Zsp2I ATGCAT 1 cut(s) 1314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.