Rroxscaffold_5G00361990

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
42809478 .. 42810741
1264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00361990.1

Sequence Viewer

Length: 1206 bp
ATGCGTTCTAAGAACAGTATGAAGGAATGGTTGTCTATTCTAGAAAGTCAAATATGGCAGTTATCATCCGACAATGAGGATAACAGGATCATGTCGGTTTTGAAGTTGAGTTTTGACAACTTGAAATCACCACTGAAGCAATGTTTTGCATATTGCTCCATCTTCGAGAGAGGTTCCTCAATTGAAAGTGATAGCTTGATCCAACTATGGATGGCTCAAGGTTTTCTCCATCCTTCTTATGGTCACCAAACCAAGCAAGAGATTGAAATGGAGGATATAGGCAATAAGTATTTTGAGACTCTACTGGAGAATTCCTTGTTTCAAGATGCTACAGAGTATGAGGATGAGGATGGTGTTATCATCACCCGATGCAAGATGCATGATCTTGTGCATGATCTTGCAAACGAAGTATCGAAGTGTGAGAGCTTGACGCCAAACTTCACTCATGAGAAGGATGATCATGATATACTTATTCGACATGTTGCACGGATTCCTACTGCAACGCTAGAAGAAATGTCAAAAAGAAGTATTTCAAGACTGCGATCACTCTTTTTTATTGGCCCTGTCTTTAATACCATTTCCCGAAAGCTTACAACTTTACATGTCTTAAGTTTATCTAGTTATGAGATTGAGGAGTTGCCAAATTTACTTGGCAAGCTGAAGCACTTGAGGTATCTAGATCTTTCCGGTACAAAAATTGAAGCACTTCCAAAATCTATTGGCAAGCTCTATAACCTCCAAACATTGAGATTACCGCGGTATGTTATAGGGTGTCCAAAGGAGGTTCAAAATTTGATCAATTTAAGGCATCTTTATTGTGGTCTTGAGGGAATGAAATTTAAGGCTGGGGTTTTGGAGCGGTTAACTAATCTCCGAAGATTGTCTTCCTTTAATGTGGGTAAGAAGAGAGGTCCTGCAATTAAGGAGCTGGGTGGGTTGAACCAATTGAGAAGCCACTTAATTATTTGGAACCTAGAACATGTAAGGGATGGAGAAGAAGCAAAGAAGGCTCGCTTAGTCCAGAAGAGTCACTTAAGTGGGTTAACACTTAAATGGACATACGATGAGGTACCTAATGAAAATCACAGGGATGTACTAGATGGCTTGGAACCTCATGGTAACTTGCAAAGCTTGAACATTGAGAATTTCATGTCAACTGCAACAATTGTGAAGAAGTCCCAAGACTCAGCCATCTACCTAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

401

Amino Acids

46.07

Weight (kDa)

6.95

Isoelectric Point (pI)

51.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 54 - 134 1.1e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 180 - 384 1e-24 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 307 - 386 2e-20 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1069
AccB1I GGYRCC 1 cut(s) 1069
AccBSI CCGCTC 1 cut(s) 859
AccII CGCG 1 cut(s) 757
AciI CCGC 3 cut(s) 755, 757, 859
AclWI GGATC 2 cut(s) 95, 193
AcsI RAATTY 5 cut(s) 310, 643, 790, 836, 1144
AcuI CTGAAG 2 cut(s) 155, 680
AcyI GRCGYC 1 cut(s) 431
AfaI GTAC 3 cut(s) 691, 1071, 1095
AfiI CCNNNNNNNGG 1 cut(s) 239
AflII CTTAAG 2 cut(s) 607, 1033
AflIII ACRYGT 3 cut(s) 478, 601, 979
AleI CACNNNNGTG 1 cut(s) 1035
AluBI AGCT 7 cut(s) 195, 426, 589, 658, 727, 928, 1131
AluI AGCT 7 cut(s) 195, 426, 589, 658, 727, 928, 1131
Alw26I GTCTC 1 cut(s) 290
AlwI GGATC 2 cut(s) 95, 193
AoxI GGCC 1 cut(s) 559
ApoI RAATTY 5 cut(s) 310, 643, 790, 836, 1144
Asp700I GAANNNNTTC 2 cut(s) 529, 705
Asp718I GGTACC 1 cut(s) 1069
AspS9I GGNCC 2 cut(s) 560, 911
AsuHPI GGTGA 3 cut(s) 120, 236, 355
AvaII GGWCC 1 cut(s) 911
BanI GGYRCC 1 cut(s) 1069
BbsI GAAGAC 1 cut(s) 876
BccI CCATC 7 cut(s) 167, 205, 237, 344, 983, 1094, 1199
BclI TGATCA 2 cut(s) 457, 795
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 6 cut(s) 41, 506, 618, 677, 974, 1097
BfmI CTRYAG 1 cut(s) 330
BfrI CTTAAG 2 cut(s) 607, 1033
BglII AGATCT 1 cut(s) 679
Bme18I GGWCC 1 cut(s) 911
BmgT120I GGNCC 2 cut(s) 560, 911
BmiI GGNNCC 4 cut(s) 175, 971, 1071, 1110
BmsI GCATC 4 cut(s) 316, 359, 366, 817
BpiI GAAGAC 1 cut(s) 876
BpmI CTGGAG 1 cut(s) 326
BpuEI CTTGAG 3 cut(s) 201, 688, 845
BsaHI GRCGYC 1 cut(s) 431
BsaJI CCNNGG 1 cut(s) 755
BsaWI WCCGGW 1 cut(s) 686
Bsc4I CCNNNNNNNGG 1 cut(s) 239
Bse1I ACTGG 1 cut(s) 309
Bse3DI GCAATG 1 cut(s) 146
BseDI CCNNGG 1 cut(s) 755
BseGI GGATG 8 cut(s) 65, 216, 229, 349, 355, 460, 994, 1096
BseLI CCNNNNNNNGG 1 cut(s) 239
BseMI GCAATG 1 cut(s) 146
BseMII CTCAG 1 cut(s) 1200
BseNI ACTGG 1 cut(s) 309
BseRI GAGGAG 1 cut(s) 647
BseYI CCCAGC 2 cut(s) 845, 928
Bsh1236I CGCG 1 cut(s) 757
BshFI GGCC 1 cut(s) 561
BshNI GGYRCC 1 cut(s) 1069
BsiSI CCGG 1 cut(s) 687
BslFI GGGAC 1 cut(s) 1162
BslI CCNNNNNNNGG 1 cut(s) 239
BsmAI GTCTC 1 cut(s) 290
BsmFI GGGAC 1 cut(s) 1162
BsnI GGCC 1 cut(s) 561
Bsp143I GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
BspACI CCGC 3 cut(s) 755, 757, 859
BspANI GGCC 1 cut(s) 561
BspCNI CTCAG 1 cut(s) 1199
BspFNI CGCG 1 cut(s) 757
BspHI TCATGA 2 cut(s) 445, 460
BspLI GGNNCC 4 cut(s) 175, 971, 1071, 1110
BspPI GGATC 2 cut(s) 95, 193
BspT107I GGYRCC 1 cut(s) 1069
BspTI CTTAAG 2 cut(s) 607, 1033
BsrBI CCGCTC 1 cut(s) 859
BsrDI GCAATG 1 cut(s) 146
BsrI ACTGG 1 cut(s) 309
BssECI CCNNGG 1 cut(s) 755
BssMI GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
BssNI GRCGYC 1 cut(s) 431
Bst4CI ACNGT 1 cut(s) 17
Bst6I CTCTTC 2 cut(s) 899, 1019
BstACI GRCGYC 1 cut(s) 431
BstAFI CTTAAG 2 cut(s) 607, 1033
BstC8I GCNNGC 3 cut(s) 656, 725, 1012
BstDEI CTNAG 3 cut(s) 9, 1015, 1186
BstDSI CCRYGG 1 cut(s) 755
BstEII GGTNACC 1 cut(s) 242
BstF5I GGATG 8 cut(s) 65, 216, 229, 349, 355, 460, 994, 1096
BstFNI CGCG 1 cut(s) 757
BstKTI GATC 8 cut(s) 90, 201, 385, 397, 460, 545, 682, 798
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
BstMWI GCNNNNNNNGC 1 cut(s) 1007
BstNSI RCATGY 3 cut(s) 482, 605, 983
BstPI GGTNACC 1 cut(s) 242
BstSFI CTRYAG 1 cut(s) 330
BstUI CGCG 1 cut(s) 757
BstV2I GAAGAC 1 cut(s) 876
BstX2I RGATCY 1 cut(s) 679
BstYI RGATCY 1 cut(s) 679
BsuRI GGCC 1 cut(s) 561
BtgI CCRYGG 1 cut(s) 755
BtsCI GGATG 8 cut(s) 65, 216, 229, 349, 355, 460, 994, 1096
BtsIMutI CAGTG 1 cut(s) 131
Cac8I GCNNGC 3 cut(s) 656, 725, 1012
CciI TCATGA 2 cut(s) 445, 460
Cfr13I GGNCC 2 cut(s) 560, 911
Cfr42I CCGCGG 1 cut(s) 758
CseI GACGC 1 cut(s) 439
Csp6I GTAC 3 cut(s) 690, 1070, 1094
CviQI GTAC 3 cut(s) 690, 1070, 1094
DdeI CTNAG 3 cut(s) 9, 1015, 1186
DpnI GATC 8 cut(s) 89, 200, 384, 396, 459, 544, 681, 797
DpnII GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
Eam1104I CTCTTC 2 cut(s) 899, 1019
EarI CTCTTC 2 cut(s) 899, 1019
Eco47I GGWCC 1 cut(s) 911
Eco57I CTGAAG 2 cut(s) 155, 680
Eco91I GGTNACC 1 cut(s) 242
EcoO109I RGGNCCY 1 cut(s) 911
EcoO65I GGTNACC 1 cut(s) 242
EcoRI GAATTC 1 cut(s) 310
EcoT22I ATGCAT 1 cut(s) 381
FalI AAGNNNNNCTT 6 cut(s) 868, 900, 998, 1030, 1016, 1048
FaqI GGGAC 1 cut(s) 1162
FbaI TGATCA 2 cut(s) 457, 795
FokI GGATG 8 cut(s) 52, 216, 223, 356, 362, 467, 1001, 1103
FspBI CTAG 6 cut(s) 41, 506, 618, 677, 974, 1097
GsaI CCCAGC 2 cut(s) 849, 932
GsuI CTGGAG 1 cut(s) 326
HaeIII GGCC 1 cut(s) 561
HapII CCGG 1 cut(s) 687
HgaI GACGC 1 cut(s) 439
Hin1I GRCGYC 1 cut(s) 431
HincII GTYRAC 3 cut(s) 864, 1044, 1155
HindII GTYRAC 3 cut(s) 864, 1044, 1155
HindIII AAGCTT 2 cut(s) 587, 1129
HinfI GANTC 4 cut(s) 298, 490, 1027, 1184
HpaI GTTAAC 2 cut(s) 864, 1044
HpaII CCGG 1 cut(s) 687
HphI GGTGA 3 cut(s) 120, 236, 355
Hpy166II GTNNAC 3 cut(s) 864, 1044, 1155
Hpy188I TCNGA 2 cut(s) 70, 875
Hpy8I GTNNAC 3 cut(s) 864, 1044, 1155
HpyAV CCTTC 4 cut(s) 16, 243, 445, 1000
HpyCH4III ACNGT 1 cut(s) 17
HpyF10VI GCNNNNNNNGC 1 cut(s) 1007
HpyF3I CTNAG 3 cut(s) 9, 1015, 1186
Hsp92I GRCGYC 1 cut(s) 431
KpnI GGTACC 1 cut(s) 1073
Ksp22I TGATCA 2 cut(s) 457, 795
KspAI GTTAAC 2 cut(s) 864, 1044
KspI CCGCGG 1 cut(s) 758
Kzo9I GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
LmnI GCTCC 3 cut(s) 161, 856, 925
LpnPI CCDG 9 cut(s) 70, 290, 576, 700, 831, 914, 927, 1034, 1072
LweI GCATC 4 cut(s) 316, 359, 366, 817
MaeI CTAG 6 cut(s) 41, 506, 618, 677, 974, 1097
MaeIII GTNAC 3 cut(s) 242, 1028, 1118
MalI GATC 8 cut(s) 89, 200, 384, 396, 459, 544, 681, 797
MbiI CCGCTC 1 cut(s) 859
MboI GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
MboII GAAGA 8 cut(s) 154, 521, 876, 888, 916, 1007, 1036, 1183
MfeI CAATTG 3 cut(s) 180, 944, 1164
MflI RGATCY 1 cut(s) 679
MlyI GAGTC 3 cut(s) 292, 1036, 1178
MmeI TCCRAC 2 cut(s) 93, 226
Mph1103I ATGCAT 1 cut(s) 381
MroXI GAANNNNTTC 2 cut(s) 529, 705
MslI CAYNNNNRTG 3 cut(s) 1035, 1051, 1089
MspA1I CMGCKG 1 cut(s) 757
MspCI CTTAAG 2 cut(s) 607, 1033
MspI CCGG 1 cut(s) 687
MunI CAATTG 3 cut(s) 180, 944, 1164
MvnI CGCG 1 cut(s) 757
MwoI GCNNNNNNNGC 1 cut(s) 1007
NdeII GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
NlaIV GGNNCC 4 cut(s) 175, 971, 1071, 1110
NmuCI GTSAC 2 cut(s) 242, 1028
NsiI ATGCAT 1 cut(s) 381
NspI RCATGY 3 cut(s) 482, 605, 983
OliI CACNNNNGTG 1 cut(s) 1035
PagI TCATGA 2 cut(s) 445, 460
PciI ACATGT 3 cut(s) 478, 601, 979
PdmI GAANNNNTTC 2 cut(s) 529, 705
PfeI GAWTC 1 cut(s) 490
PleI GAGTC 3 cut(s) 292, 1035, 1178
PpsI GAGTC 3 cut(s) 292, 1035, 1178
PpuMI RGGWCCY 1 cut(s) 911
PscI ACATGT 3 cut(s) 478, 601, 979
Psp5II RGGWCCY 1 cut(s) 911
PspEI GGTNACC 1 cut(s) 242
PspFI CCCAGC 2 cut(s) 845, 928
PspN4I GGNNCC 4 cut(s) 175, 971, 1071, 1110
PspPI GGNCC 2 cut(s) 560, 911
PspPPI RGGWCCY 1 cut(s) 911
PsuI RGATCY 1 cut(s) 679
RsaI GTAC 3 cut(s) 691, 1071, 1095
RsaNI GTAC 3 cut(s) 690, 1070, 1094
RseI CAYNNNNRTG 3 cut(s) 1035, 1051, 1089
SacII CCGCGG 1 cut(s) 758
Sau3AI GATC 8 cut(s) 87, 198, 382, 394, 457, 542, 679, 795
Sau96I GGNCC 2 cut(s) 560, 911
SchI GAGTC 3 cut(s) 292, 1036, 1178
SfaNI GCATC 4 cut(s) 316, 359, 366, 817
SfcI CTRYAG 1 cut(s) 330
Sfr303I CCGCGG 1 cut(s) 758
SgrBI CCGCGG 1 cut(s) 758
SinI GGWCC 1 cut(s) 911
SmiMI CAYNNNNRTG 3 cut(s) 1035, 1051, 1089
SmlI CTYRAG 5 cut(s) 216, 607, 667, 824, 1033
SmoI CTYRAG 5 cut(s) 216, 607, 667, 824, 1033
SsiI CCGC 3 cut(s) 755, 757, 859
SspMI CTAG 6 cut(s) 41, 506, 618, 677, 974, 1097
TaaI ACNGT 1 cut(s) 17
TaqI TCGA 3 cut(s) 165, 413, 475
TatI WGTACW 1 cut(s) 1093
TfiI GAWTC 1 cut(s) 490
TscAI CASTG 1 cut(s) 138
TseFI GTSAC 2 cut(s) 242, 1028
Tsp45I GTSAC 2 cut(s) 242, 1028
TspDTI ATGAA 4 cut(s) 35, 848, 1092, 1138
TspGWI ACGGA 1 cut(s) 502
TspRI CASTG 1 cut(s) 138
Vha464I CTTAAG 2 cut(s) 607, 1033
VpaK11BI GGWCC 1 cut(s) 911
XapI RAATTY 5 cut(s) 310, 643, 790, 836, 1144
XbaI TCTAGA 2 cut(s) 40, 676
XceI RCATGY 3 cut(s) 482, 605, 983
XcmI CCANNNNNNNNNTGG 1 cut(s) 236
XmnI GAANNNNTTC 2 cut(s) 529, 705
XspI CTAG 6 cut(s) 41, 506, 618, 677, 974, 1097
Zsp2I ATGCAT 1 cut(s) 381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.