RchiOBHm_Chr4g0417731

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
43044762 .. 43051330
6569 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38779

Sequence Viewer

Length: 3138 bp
ATGGAAAAATACTTTGATGCAACATTATGGGTGTATGTATCCAATACTTTTGATGTCAATTCAATTTTACATGGAATGGTGCAATCATGTGGCGTGACGGGAATAGACTCTTCAAATCAGCAAGCATTGATGGAAAGCCTCCAGCAGAAGTTGAAAGAGAAAAGGTATTTTCTTGTACTTGATGACGTTTGGAATGAGAATGCTAACAATTGGGATGATTTGAAGCATTGTCTGTTGCAACTAAATTCTGCTAAAGGAAGCTTTGTGATTGTCACCACCCGTAGTGCCAAGGTAGCATCAATCATGGAAACACTTCCTAGGTGCGATCTAGGGACTCTATCGGATGATGAATGTTGGTCCATATTGAAGGATAGAGCATTTGCAGATGCTAATGCTCCGATACCTTCAGAACTAGAGGAAATCGGAAGGGACATTGCCAAAAAGTGTGCTGGTCTTCCATTGCCGGCAAAGGTTTTGGGAAGCTTGATGCGTTCTAAGAACAGTAGTAAGGAATGGTTGTCAATTTTGGAAAGTAAAATATGGCAAGTATCATCAGACAAAGAGGATAGCAGGATCATGTCGGTTCTGAGGTTGAGTTTTGACTTTCTGGAATCACCATTGAAACAATGTTTTTCATATTGCTCCATGCTCAAGAAAGGTTCCTCAATTAAAAGAGATAACTTGATCCAACTATGGATGGCTCAAGGTTTTCTCTATCCTTCTCATGATCACCAGAGCAAGCAAGCGATTGAAATGGAGGATATAGGCAATAAGTATTTTGATACTCTACTGGAGAACTCCTTGTTTCAAGATGCTACAAAGGATGAGGATGGCGTTATCAGTCAATGCAAGATGCACGATCTTTTGCATGATTGTGCGGTAGAAGTATCCGTGTGTGAGAGTTGGACACCAGACTTCGGTAATGAGATGGATGATGGTGTGATTCGACATGTCGCACGGATTCCTACTCAAAAGCTAGAAAGTATGCCAAAAACAAGTATTTCAAGACTGCGATCACTCTTTTCAAATGGCCCCGTCTCTAATACCATTTTCCAAAAGCTTACGAGTTTACGTGTCTTAAGTTTCTCTTGGCAAGCTGAAGCACTTGAGGAGTTGCCGTATTCACTTGGCAAGCTGAAGCACTTGAGGTATCTAGATCTTTCACGTACAAAAATTGAAGCACTCCCAAAGTCTATTGGCAAGCTCTACAACCTCCAAACATTGAGATTACCGATTTATTTCGGAAAGTGTCCAAAGATGATTCAAAATTTGATCAACTTGAGGCATTTTTACTTTGGTGAGGGAATGAAATTTGAGGCTGGGATTTTGGGGCGATTAACTAATCTCCGAACATTGCGCGACTTTAATGTGGATGAGGAGAGCGGTCGTGCAATTAAGGAGTTGGGTGGGTTGAACCAATTGAGAGGCCACTTAAATATTCGGAATCTAGAACATGTAAGGGACGGAGAAGAAGCAAAGAAGGCTTTCTTAGTGGAGAAAAGTCACTTAAGTGAGTTGACTTTTGACTGGTCACTCAGGCCAACTAATAACAATGAGACGGATGTACTGGATGGCTTGGAACCTCATGGTAACTTGCAAAGCTTGAAGATTCACAATTTCATGGGTGCTAGATTTCCGTCATGGATAACGAGTCTGCAAAATTTGAACAAGATTCGGTTATGGAGATGCGACAATTTTGAAGGAGTCCCAACACTCGGTCACCTGCCTAATCTAAGATCTCTTGAGATTGTTGAGATGTACAAGCTGAAACGTGTGGGAGCTGAGGTTTATGGTGATAGTGATAATAGCACAACTTTATTTCCAGCTCTGAAAACACTATCCATCTCTCGGTGCCAACAGCTCATTGAATGGATAGAAGCGCCGAGGATATCAGCTGAAGGAGAAATCGTGGTATTTCCTTGCCTCGACCGGTTGAGGATAGATGGTTGTGACAGCCTAGAGTCGATTCGGATCACACAGGGCAACGCATCTCTCCGTGAATTGAAGATTTGCGATTGTTGGAGATTATCAAGCCTAGAGGTTGGGCTCGAATACTGCACCTCTCTTCAGGAGTTGGAGATACGTGTTTGCCCTGTTCTGGTTTCAATTCCAATCCCACAGGGCATGCCGTCTCTCCGGAAATTGACGATTGAATGGTGTGGGGAAATATCAAGCCTAGGAAGTGGGCTCAACTACTGCACCTCTCTTCAGGAATTGGAGATAAAGAATTGTGACAATCTAACATCAATTCCAATCACACAGGGCATGCCATCTCTCCAGATATTGAGGATCTGCTTGTGTGCGGGATTATCAAGCCTAGGAGGTGGGCTCAACTACTGCACCTCTCTTCAGGAATTGGAGATTGGGTATTGTCAAAATCTAACATCAATTCCAATCACACAGGGCATCACATCTCTCCGAGAATTGAAGATTGATAGTTGTTGGAGATTATTAGGCCTACCGAGTGGGCTCCGATTCTGCACCTCTCTTGAGGATCTGGAAATAACTCATTGCTCTAGTCTAGTATCCATGTCAGTATCATATGTGAAGTGCGACCACCCGGACTCAACGAATGAACCGGAGGAAGTCTCTACGGGTGTCGTTGAGTATTTGTCTATACAGGAGGATTGTCGTAATCTAGAATCTATTCCACCAAATCTCCGTCAGTTGTTGATATGTCATTGTGGGAAATTAAAATATGTGCCCACAGGATTTCACCACCTCACTCGTTTGAAGACGCTCCGAATAGGTCCCTTCTGGCATAAGCTGGACGCCTTCCCTGATTTTCAGCTTGCACCTAATTCACAACTTGAAGAGTTATGGTTGTTTGGGTGGCCTAAGCTCAAGTCTCTGCCCCAACAAATTCAGCACTCTACTTGTTTAAAAGAACTCTGGATACAAGATTTTGGGGGACTAGAGGCTCTTCCTGAGTGGTTGGGAAATCTTACATCTCTTGAGTCTCTGAGGATCTGGTCCTGTAAGAATCTCAAGTATCTGCCTACACAAAATGCTATGAAAAACCTCACCAAATTGAAGTACCTCTACATTGGCGGATGTCCCCTGCTCAAAGAAGGATGCACCAAGGAGACTGGCCCAGAATGGCCCAAGATTTCTCACATTCCAAAAGTTATCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1045

Amino Acids

118.32

Weight (kDa)

6.04

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 2 - 129 1.4e-21 NB-ARC domain
WHD_DRP PF23559 219 - 292 1.1e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 337 - 694 1.8e-35 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 465 - 586 3.6e-37 R13L1/DRL21 LRRs
LRR_R13L1-DRL21 PF25019 953 - 1018 1.2e-08 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1731
Acc36I ACCTGC 1 cut(s) 1731
AccB1I GGYRCC 1 cut(s) 1851
AccBSI CCGCTC 1 cut(s) 1383
AccII CGCG 1 cut(s) 1359
AccIII TCCGGA 1 cut(s) 2136
AciI CCGC 4 cut(s) 878, 1383, 2303, 3051
AclWI GGATC 6 cut(s) 581, 679, 1979, 2297, 2502, 2975
AcsI RAATTY 5 cut(s) 244, 1267, 1310, 1660, 2862
AcuI CTGAAG 7 cut(s) 390, 1119, 1157, 1917, 2051, 2192, 2333
AcyI GRCGYC 1 cut(s) 2772
AfaI GTAC 5 cut(s) 177, 1168, 1566, 1760, 3038
AfiI CCNNNNNNNGG 4 cut(s) 917, 1715, 1848, 2098
AflII CTTAAG 2 cut(s) 1078, 1507
AflIII ACRYGT 5 cut(s) 949, 1072, 1453, 1771, 2083
AgeI ACCGGT 1 cut(s) 1929
AjuI GAANNNNNNNTTGG 2 cut(s) 2346, 2378
AleI CACNNNNGTG 1 cut(s) 1509
Alw26I GTCTC 7 cut(s) 1042, 1550, 2136, 2593, 2853, 2964, 3080
AlwI GGATC 6 cut(s) 581, 679, 1979, 2297, 2502, 2975
Aor13HI TCCGGA 1 cut(s) 2136
AoxI GGCC 7 cut(s) 1030, 1426, 1538, 2455, 2834, 3091, 3101
ApoI RAATTY 5 cut(s) 244, 1267, 1310, 1660, 2862
AsiGI ACCGGT 1 cut(s) 1929
Asp700I GAANNNNTTC 3 cut(s) 312, 1484, 2646
AspA2I CCTAGG 3 cut(s) 317, 2176, 2317
AspLEI GCGC 2 cut(s) 1359, 1882
AspS9I GGNCC 6 cut(s) 357, 1031, 2750, 2973, 3092, 3102
AsuC2I CCSGG 1 cut(s) 2561
AsuHPI GGTGA 8 cut(s) 265, 606, 722, 1310, 1712, 1805, 2708, 3016
AvaII GGWCC 3 cut(s) 357, 2750, 2973
AvrII CCTAGG 3 cut(s) 317, 2176, 2317
BaeGI GKGCMC 1 cut(s) 2706
BanI GGYRCC 1 cut(s) 1851
BanII GRGCYC 4 cut(s) 2049, 2190, 2331, 2472
BarI GAAGNNNNNNTAC 2 cut(s) 3026, 3058
BbsI GAAGAC 2 cut(s) 446, 2741
BbvCI CCTCAGC 1 cut(s) 1782
BccI CCATC 9 cut(s) 124, 691, 824, 922, 929, 1565, 1850, 1937, 2278
BceAI ACGGC 2 cut(s) 1102, 2113
BciVI GTATCC 4 cut(s) 49, 898, 2536, 2889
BclI TGATCA 2 cut(s) 727, 1272
BcnI CCSGG 1 cut(s) 2561
BcoDI GTCTC 7 cut(s) 1042, 1550, 2136, 2593, 2853, 2964, 3080
BfoI RGCGCY 1 cut(s) 1883
BfrI CTTAAG 2 cut(s) 1078, 1507
BfuAI ACCTGC 1 cut(s) 1731
BfuI GTATCC 4 cut(s) 49, 898, 2536, 2889
BglII AGATCT 2 cut(s) 1156, 1736
BlnI CCTAGG 3 cut(s) 317, 2176, 2317
Bme1390I CCNGG 1 cut(s) 2561
Bme18I GGWCC 3 cut(s) 357, 2750, 2973
BmgT120I GGNCC 6 cut(s) 357, 1031, 2750, 2973, 3092, 3102
BmiI GGNNCC 6 cut(s) 661, 1033, 1581, 1853, 2471, 2752
BmrFI CCNGG 1 cut(s) 2561
BpiI GAAGAC 2 cut(s) 446, 2741
BplI GAGNNNNNCTC 4 cut(s) 2313, 2345, 2573, 2605
BpmI CTGGAG 3 cut(s) 125, 812, 2261
Bpu10I CCTNAGC 2 cut(s) 1782, 2838
BpuMI CCSGG 1 cut(s) 2561
BsaAI YACGTR 3 cut(s) 1073, 1166, 2084
BsaBI GATNNNNATC 1 cut(s) 1970
BsaHI GRCGYC 1 cut(s) 2772
BsaJI CCNNGG 6 cut(s) 288, 317, 1883, 2176, 2317, 3081
BsaWI WCCGGW 3 cut(s) 1929, 2136, 2578
Bsc4I CCNNNNNNNGG 4 cut(s) 917, 1715, 1848, 2098
Bse118I RCCGGY 2 cut(s) 463, 1929
Bse1I ACTGG 4 cut(s) 795, 1532, 1572, 3094
Bse3DI GCAATG 4 cut(s) 432, 458, 1352, 2509
Bse8I GATNNNNATC 1 cut(s) 1970
BseAI TCCGGA 1 cut(s) 2136
BseDI CCNNGG 6 cut(s) 288, 317, 1883, 2176, 2317, 3081
BseJI GATNNNNATC 1 cut(s) 1970
BseLI CCNNNNNNNGG 4 cut(s) 917, 1715, 1848, 2098
BseMI GCAATG 4 cut(s) 432, 458, 1352, 2509
BseMII CTCAG 5 cut(s) 578, 1549, 1773, 2919, 2954
BseNI ACTGG 4 cut(s) 795, 1532, 1572, 3094
BseRI GAGGAG 2 cut(s) 1124, 1391
BseSI GKGCMC 1 cut(s) 2706
BseYI CCCAGC 1 cut(s) 1319
BsgI GTGCAG 4 cut(s) 2041, 2182, 2323, 2464
Bsh1236I CGCG 1 cut(s) 1359
Bsh1285I CGRYCG 2 cut(s) 1387, 1930
BshFI GGCC 7 cut(s) 1032, 1428, 1540, 2457, 2836, 3093, 3103
BshNI GGYRCC 1 cut(s) 1851
BshTI ACCGGT 1 cut(s) 1929
BsiEI CGRYCG 2 cut(s) 1387, 1930
BsiSI CCGG 5 cut(s) 464, 1930, 2137, 2561, 2579
BslFI GGGAC 7 cut(s) 346, 443, 1475, 1691, 2736, 2925, 3042
BslI CCNNNNNNNGG 4 cut(s) 917, 1715, 1848, 2098
BsmAI GTCTC 7 cut(s) 1042, 1550, 2136, 2593, 2853, 2964, 3080
BsmBI CGTCTC 3 cut(s) 1042, 1550, 2136
BsmFI GGGAC 7 cut(s) 346, 443, 1475, 1691, 2736, 2925, 3042
BsmI GAATGC 1 cut(s) 205
BsnI GGCC 7 cut(s) 1032, 1428, 1540, 2457, 2836, 3093, 3103
Bsp1286I GDGCHC 5 cut(s) 2049, 2190, 2331, 2472, 2706
Bsp13I TCCGGA 1 cut(s) 2136
Bsp1407I TGTACA 1 cut(s) 1758
BspACI CCGC 4 cut(s) 878, 1383, 2303, 3051
BspANI GGCC 7 cut(s) 1032, 1428, 1540, 2457, 2836, 3093, 3103
BspCNI CTCAG 5 cut(s) 579, 1548, 1774, 2920, 2955
BspEI TCCGGA 1 cut(s) 2136
BspFNI CGCG 1 cut(s) 1359
BspHI TCATGA 1 cut(s) 724
BspLI GGNNCC 6 cut(s) 661, 1033, 1581, 1853, 2471, 2752
BspMI ACCTGC 1 cut(s) 1731
BspPI GGATC 6 cut(s) 581, 679, 1979, 2297, 2502, 2975
BspQI GCTCTTC 1 cut(s) 2928
BspT107I GGYRCC 1 cut(s) 1851
BspTI CTTAAG 2 cut(s) 1078, 1507
BsrBI CCGCTC 1 cut(s) 1383
BsrDI GCAATG 4 cut(s) 432, 458, 1352, 2509
BsrFI RCCGGY 2 cut(s) 463, 1929
BsrGI TGTACA 1 cut(s) 1758
BsrI ACTGG 4 cut(s) 795, 1532, 1572, 3094
BssAI RCCGGY 2 cut(s) 463, 1929
BssECI CCNNGG 6 cut(s) 288, 317, 1883, 2176, 2317, 3081
BssNI GRCGYC 1 cut(s) 2772
BssT1I CCWWGG 5 cut(s) 288, 317, 2176, 2317, 3081
Bst4CI ACNGT 1 cut(s) 503
Bst6I CTCTTC 6 cut(s) 115, 2070, 2211, 2352, 2808, 2928
BstACI GRCGYC 1 cut(s) 2772
BstAFI CTTAAG 2 cut(s) 1078, 1507
BstAUI TGTACA 1 cut(s) 1758
BstBAI YACGTR 3 cut(s) 1073, 1166, 2084
BstDEI CTNAG 9 cut(s) 495, 587, 1489, 1535, 1733, 1782, 2838, 2928, 2963
BstEII GGTNACC 1 cut(s) 1718
BstFNI CGCG 1 cut(s) 1359
BstH2I RGCGCY 1 cut(s) 1883
BstHHI GCGC 2 cut(s) 1359, 1882
BstMAI GTCTC 7 cut(s) 1042, 1550, 2136, 2593, 2853, 2964, 3080
BstMCI CGRYCG 2 cut(s) 1387, 1930
BstMWI GCNNNNNNNGC 2 cut(s) 293, 1481
BstNSI RCATGY 4 cut(s) 953, 1457, 2128, 2269
BstPI GGTNACC 1 cut(s) 1718
BstSCI CCNGG 1 cut(s) 2559
BstSLI GKGCMC 1 cut(s) 2706
BstUI CGCG 1 cut(s) 1359
BstV2I GAAGAC 2 cut(s) 446, 2741
BstX2I RGATCY 5 cut(s) 1156, 1736, 2289, 2494, 2967
BstYI RGATCY 5 cut(s) 1156, 1736, 2289, 2494, 2967
BsuI GTATCC 4 cut(s) 49, 898, 2536, 2889
BsuRI GGCC 7 cut(s) 1032, 1428, 1540, 2457, 2836, 3093, 3103
BveI ACCTGC 1 cut(s) 1731
CciI TCATGA 1 cut(s) 724
CfoI GCGC 2 cut(s) 1359, 1882
Cfr10I RCCGGY 2 cut(s) 463, 1929
Cfr13I GGNCC 6 cut(s) 357, 1031, 2750, 2973, 3092, 3102
CseI GACGC 2 cut(s) 2746, 2780
Csp6I GTAC 5 cut(s) 176, 1167, 1565, 1759, 3037
CspAI ACCGGT 1 cut(s) 1929
CviQI GTAC 5 cut(s) 176, 1167, 1565, 1759, 3037
DdeI CTNAG 9 cut(s) 495, 587, 1489, 1535, 1733, 1782, 2838, 2928, 2963
DraI TTTAAA 1 cut(s) 2883
Eam1104I CTCTTC 6 cut(s) 115, 2070, 2211, 2352, 2808, 2928
EarI CTCTTC 6 cut(s) 115, 2070, 2211, 2352, 2808, 2928
EciI GGCGGA 1 cut(s) 3066
Eco130I CCWWGG 5 cut(s) 288, 317, 2176, 2317, 3081
Eco147I AGGCCT 1 cut(s) 2457
Eco24I GRGCYC 4 cut(s) 2049, 2190, 2331, 2472
Eco32I GATATC 1 cut(s) 1890
Eco47I GGWCC 3 cut(s) 357, 2750, 2973
Eco57I CTGAAG 7 cut(s) 390, 1119, 1157, 1917, 2051, 2192, 2333
Eco91I GGTNACC 1 cut(s) 1718
EcoO109I RGGNCCY 1 cut(s) 2750
EcoO65I GGTNACC 1 cut(s) 1718
EcoRV GATATC 1 cut(s) 1890
EcoT14I CCWWGG 5 cut(s) 288, 317, 2176, 2317, 3081
EcoT38I GRGCYC 4 cut(s) 2049, 2190, 2331, 2472
ErhI CCWWGG 5 cut(s) 288, 317, 2176, 2317, 3081
Esp3I CGTCTC 3 cut(s) 1042, 1550, 2136
FalI AAGNNNNNCTT 4 cut(s) 1072, 1104, 1472, 1504
FaqI GGGAC 7 cut(s) 346, 443, 1475, 1691, 2736, 2925, 3042
FauI CCCGC 1 cut(s) 2296
FauNDI CATATG 1 cut(s) 2542
FbaI TGATCA 2 cut(s) 727, 1272
FriOI GRGCYC 4 cut(s) 2049, 2190, 2331, 2472
GlaI GCGC 2 cut(s) 1358, 1881
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 3 cut(s) 125, 812, 2261
HaeII RGCGCY 1 cut(s) 1883
HaeIII GGCC 7 cut(s) 1032, 1428, 1540, 2457, 2836, 3093, 3103
HapII CCGG 5 cut(s) 464, 1930, 2137, 2561, 2579
HgaI GACGC 2 cut(s) 2746, 2780
HhaI GCGC 2 cut(s) 1359, 1882
Hin1I GRCGYC 1 cut(s) 2772
Hin6I GCGC 2 cut(s) 1357, 1880
HinP1I GCGC 2 cut(s) 1357, 1880
HincII GTYRAC 1 cut(s) 1518
HindII GTYRAC 1 cut(s) 1518
HindIII AAGCTT 4 cut(s) 259, 481, 1058, 1600
HpaII CCGG 5 cut(s) 464, 1930, 2137, 2561, 2579
HphI GGTGA 8 cut(s) 265, 606, 722, 1310, 1712, 1805, 2708, 3016
Hpy166II GTNNAC 2 cut(s) 1070, 1518
Hpy8I GTNNAC 2 cut(s) 1070, 1518
HpyCH4III ACNGT 1 cut(s) 503
HpyCH4IV ACGT 5 cut(s) 186, 1072, 1165, 1771, 2083
HpyF10VI GCNNNNNNNGC 2 cut(s) 293, 1481
HpyF3I CTNAG 9 cut(s) 495, 587, 1489, 1535, 1733, 1782, 2838, 2928, 2963
HpySE526I ACGT 5 cut(s) 186, 1072, 1165, 1771, 2083
Hsp92I GRCGYC 1 cut(s) 2772
HspAI GCGC 2 cut(s) 1357, 1880
Kpn2I TCCGGA 1 cut(s) 2136
KroI GCCGGC 1 cut(s) 463
KroNI GCCGGC 1 cut(s) 465
Ksp22I TGATCA 2 cut(s) 727, 1272
LguI GCTCTTC 1 cut(s) 2928
LmnI GCTCC 5 cut(s) 400, 647, 1778, 2475, 2745
MaeII ACGT 5 cut(s) 186, 1072, 1165, 1771, 2083
MaeIII GTNAC 8 cut(s) 94, 271, 1502, 1530, 1589, 1718, 1949, 2231
MbiI CCGCTC 1 cut(s) 1383
MfeI CAATTG 2 cut(s) 208, 1418
MflI RGATCY 5 cut(s) 1156, 1736, 2289, 2494, 2967
MhlI GDGCHC 5 cut(s) 2049, 2190, 2331, 2472, 2706
MlyI GAGTC 7 cut(s) 101, 328, 1660, 1713, 1970, 2558, 2966
MmeI TCCRAC 5 cut(s) 712, 884, 2000, 2055, 2423
MroI TCCGGA 1 cut(s) 2136
MroNI GCCGGC 1 cut(s) 463
MroXI GAANNNNTTC 3 cut(s) 312, 1484, 2646
MseI TTAA 9 cut(s) 669, 1079, 1337, 1365, 1395, 1433, 1508, 2693, 2882
MslI CAYNNNNRTG 2 cut(s) 873, 1509
MspA1I CMGCKG 1 cut(s) 1895
MspCI CTTAAG 2 cut(s) 1078, 1507
MspI CCGG 5 cut(s) 464, 1930, 2137, 2561, 2579
MspR9I CCNGG 1 cut(s) 2561
MunI CAATTG 2 cut(s) 208, 1418
Mva1269I GAATGC 1 cut(s) 205
MvnI CGCG 1 cut(s) 1359
MwoI GCNNNNNNNGC 2 cut(s) 293, 1481
NaeI GCCGGC 1 cut(s) 465
NciI CCSGG 1 cut(s) 2561
NdeI CATATG 1 cut(s) 2542
NgoMIV GCCGGC 1 cut(s) 463
NlaIV GGNNCC 6 cut(s) 661, 1033, 1581, 1853, 2471, 2752
NmeAIII GCCGAG 1 cut(s) 1908
NmuCI GTSAC 7 cut(s) 94, 271, 1502, 1530, 1718, 1949, 2231
NspI RCATGY 4 cut(s) 953, 1457, 2128, 2269
OliI CACNNNNGTG 1 cut(s) 1509
PaeI GCATGC 2 cut(s) 2128, 2269
PagI TCATGA 1 cut(s) 724
PaqCI CACCTGC 1 cut(s) 1731
PceI AGGCCT 1 cut(s) 2457
PciI ACATGT 2 cut(s) 949, 1453
PciSI GCTCTTC 1 cut(s) 2928
PctI GAATGC 1 cut(s) 205
PdiI GCCGGC 1 cut(s) 465
PdmI GAANNNNTTC 3 cut(s) 312, 1484, 2646
PinAI ACCGGT 1 cut(s) 1929
PleI GAGTC 7 cut(s) 101, 328, 1659, 1712, 1969, 2558, 2965
PpsI GAGTC 7 cut(s) 101, 328, 1659, 1712, 1969, 2558, 2965
Ppu21I YACGTR 3 cut(s) 1073, 1166, 2084
PpuMI RGGWCCY 1 cut(s) 2750
PscI ACATGT 2 cut(s) 949, 1453
Psp5II RGGWCCY 1 cut(s) 2750
PspEI GGTNACC 1 cut(s) 1718
PspFI CCCAGC 1 cut(s) 1319
PspN4I GGNNCC 6 cut(s) 661, 1033, 1581, 1853, 2471, 2752
PspPI GGNCC 6 cut(s) 357, 1031, 2750, 2973, 3092, 3102
PspPPI RGGWCCY 1 cut(s) 2750
PsrI GAACNNNNNNTAC 2 cut(s) 2880, 2912
PsuI RGATCY 5 cut(s) 1156, 1736, 2289, 2494, 2967
PvuII CAGCTG 1 cut(s) 1895
RsaI GTAC 5 cut(s) 177, 1168, 1566, 1760, 3038
RsaNI GTAC 5 cut(s) 176, 1167, 1565, 1759, 3037
RseI CAYNNNNRTG 2 cut(s) 873, 1509
SapI GCTCTTC 1 cut(s) 2928
SaqAI TTAA 9 cut(s) 669, 1079, 1337, 1365, 1395, 1433, 1508, 2693, 2882
Sau96I GGNCC 6 cut(s) 357, 1031, 2750, 2973, 3092, 3102
SchI GAGTC 7 cut(s) 101, 328, 1660, 1713, 1970, 2558, 2966
ScrFI CCNGG 1 cut(s) 2561
SduI GDGCHC 5 cut(s) 2049, 2190, 2331, 2472, 2706
SinI GGWCC 3 cut(s) 357, 2750, 2973
SmiMI CAYNNNNRTG 2 cut(s) 873, 1509
SphI GCATGC 2 cut(s) 2128, 2269
SseBI AGGCCT 1 cut(s) 2457
SsiI CCGC 4 cut(s) 878, 1383, 2303, 3051
SspI AATATT 1 cut(s) 1438
StuI AGGCCT 1 cut(s) 2457
StyD4I CCNGG 1 cut(s) 2559
StyI CCWWGG 5 cut(s) 288, 317, 2176, 2317, 3081
TaaI ACNGT 1 cut(s) 503
TaiI ACGT 5 cut(s) 189, 1075, 1168, 1774, 2086
TaqI TCGA 4 cut(s) 946, 1926, 1964, 2049
TaqII GACCGA 1 cut(s) 1706
TatI WGTACW 3 cut(s) 175, 1564, 1758
Tru1I TTAA 9 cut(s) 669, 1079, 1337, 1365, 1395, 1433, 1508, 2693, 2882
Tru9I TTAA 9 cut(s) 669, 1079, 1337, 1365, 1395, 1433, 1508, 2693, 2882
TseFI GTSAC 7 cut(s) 94, 271, 1502, 1530, 1718, 1949, 2231
Tsp45I GTSAC 7 cut(s) 94, 271, 1502, 1530, 1718, 1949, 2231
TspDTI ATGAA 6 cut(s) 363, 624, 1322, 1609, 2589, 3029
TspGWI ACGGA 7 cut(s) 880, 973, 1479, 1574, 1626, 1985, 2651
Vha464I CTTAAG 2 cut(s) 1078, 1507
VpaK11BI GGWCC 3 cut(s) 357, 2750, 2973
XapI RAATTY 5 cut(s) 244, 1267, 1310, 1660, 2862
XbaI TCTAGA 3 cut(s) 1153, 1447, 2638
XceI RCATGY 4 cut(s) 953, 1457, 2128, 2269
XmaJI CCTAGG 3 cut(s) 317, 2176, 2317
XmnI GAANNNNTTC 3 cut(s) 312, 1484, 2646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.