MD03G1049100.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
3945037 .. 3946176
1140 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1049100.v1.1.491

Sequence Viewer

Length: 720 bp
ATGGCGGCTGAAGCTGTGCTTACTTTTGCTGCGGAGGGAATACTGAACAAGGTGCTTTCGCTTCCTGCTCAAGAATTCGGTCTTGCATGGGGTTTCAAAGCTGAACTCAGAGAGGTTCGAAAGTCATTCACCGGCATTGAATGTTTCTTGGTTGATGTTGCCGACCAACCACAAGGTCGGAGCAAGTCAATAGAGGAATGGGTGAAGAACCTCAAAGACGTAGCTCAGGATGCTGAGGATGTCTTGGATGAACTCCAGTACGAAGTTGATCGGCGTAAAGTCGAAATCCAAAACCATATGAAGAAAAAGGTTCTTAACTTCTTTTCACTCTCCAATCCACTTGCATTTCGTCTTCAAATGGCGCATAAAATGCAGAAGATCAATGCATCCTTGGTGGAACTCAAGAGTGAAGCATCTGTTCTTGGACTAGTTTCCAAGAATAAAGGTGCAACCCCTCAGGGGATCAGATGGGATAGACAAACCGACTCACGTATTGGCAGAGATGGAATAACTGTTGGAAGGGGAGAGGTTGTGACAAAAATAGTTACAACCTTGACCGACTCCAAGTACAATCAAGAAAATCCTGCGGTTATGGCCATCGTGGGAATGGGTGGCCTCGGAAAGACAACATTGGCCAAGTCCGTTTATAATGAGGCTTTGATACACAAGCATTTCGAAACAGGAATATGGGTTTGTGTATCGGACACTTTTCGATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

240

Amino Acids

26.6

Weight (kDa)

8.35

Isoelectric Point (pI)

31.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 99 2.2e-19 Rx N-terminal domain
NB-ARC PF00931 180 - 237 1.3e-13 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
AciI CCGC 3 cut(s) 5, 32, 587
AclWI GGATC 1 cut(s) 470
AcoI YGGCCR 2 cut(s) 594, 633
AcsI RAATTY 1 cut(s) 74
AcuI CTGAAG 1 cut(s) 30
AfaI GTAC 2 cut(s) 260, 569
AfiI CCNNNNNNNGG 1 cut(s) 459
AgsI TTSAA 3 cut(s) 97, 140, 356
AhlI ACTAGT 1 cut(s) 427
AluBI AGCT 3 cut(s) 14, 101, 224
AluI AGCT 3 cut(s) 14, 101, 224
AlwI GGATC 1 cut(s) 470
AoxI GGCC 3 cut(s) 594, 613, 633
ApeKI GCWGC 1 cut(s) 29
ApoI RAATTY 1 cut(s) 74
AspLEI GCGC 1 cut(s) 364
AsuHPI GGTGA 2 cut(s) 121, 214
AsuII TTCGAA 2 cut(s) 118, 675
AxyI CCTNAGG 1 cut(s) 456
BalI TGGCCA 2 cut(s) 596, 635
BbsI GAAGAC 1 cut(s) 344
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 1 cut(s) 16
BccI CCATC 3 cut(s) 462, 497, 605
BcuI ACTAGT 1 cut(s) 427
BfaI CTAG 1 cut(s) 428
BisI GCNGC 2 cut(s) 6, 30
BlsI GCNGC 2 cut(s) 7, 31
BmsI GCATC 3 cut(s) 220, 395, 422
BpiI GAAGAC 1 cut(s) 344
BpmI CTGGAG 1 cut(s) 239
Bpu10I CCTNAGC 2 cut(s) 225, 234
Bpu14I TTCGAA 2 cut(s) 118, 675
BpuEI CTTGAG 2 cut(s) 54, 386
BsaAI YACGTR 1 cut(s) 491
BsaJI CCNNGG 2 cut(s) 390, 616
BsaXI ACNNNNNCTCC 2 cut(s) 516, 546
Bsc4I CCNNNNNNNGG 1 cut(s) 459
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 1 cut(s) 256
Bse21I CCTNAGG 1 cut(s) 456
BseDI CCNNGG 2 cut(s) 390, 616
BseGI GGATG 4 cut(s) 235, 244, 253, 386
BseLI CCNNNNNNNGG 1 cut(s) 459
BseMII CTCAG 4 cut(s) 121, 225, 239, 470
BseNI ACTGG 1 cut(s) 256
BseXI GCAGC 1 cut(s) 16
BshFI GGCC 3 cut(s) 596, 615, 635
BsiSI CCGG 1 cut(s) 132
BslI CCNNNNNNNGG 1 cut(s) 459
BsnI GGCC 3 cut(s) 596, 615, 635
Bsp119I TTCGAA 2 cut(s) 118, 675
Bsp143I GATC 3 cut(s) 268, 378, 462
BspACI CCGC 3 cut(s) 5, 32, 587
BspANI GGCC 3 cut(s) 596, 615, 635
BspCNI CTCAG 4 cut(s) 120, 226, 238, 469
BspPI GGATC 1 cut(s) 470
BspT104I TTCGAA 2 cut(s) 118, 675
BsrFI RCCGGY 1 cut(s) 131
BsrI ACTGG 1 cut(s) 256
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 2 cut(s) 390, 616
BssMI GATC 3 cut(s) 268, 378, 462
BssT1I CCWWGG 1 cut(s) 390
Bst4CI ACNGT 1 cut(s) 514
BstAPI GCANNNNNTGC 1 cut(s) 370
BstBAI YACGTR 1 cut(s) 491
BstBI TTCGAA 2 cut(s) 118, 675
BstDEI CTNAG 4 cut(s) 107, 225, 234, 456
BstF5I GGATG 4 cut(s) 235, 244, 253, 386
BstHHI GCGC 1 cut(s) 364
BstKTI GATC 3 cut(s) 271, 381, 465
BstMBI GATC 3 cut(s) 268, 378, 462
BstMWI GCNNNNNNNGC 4 cut(s) 11, 230, 370, 593
BstV1I GCAGC 1 cut(s) 16
BstV2I GAAGAC 1 cut(s) 344
Bsu36I CCTNAGG 1 cut(s) 456
BsuRI GGCC 3 cut(s) 596, 615, 635
BtsCI GGATG 4 cut(s) 235, 244, 253, 386
CfoI GCGC 1 cut(s) 364
Cfr10I RCCGGY 1 cut(s) 131
Csp6I GTAC 2 cut(s) 259, 568
CviAII CATG 1 cut(s) 87
CviJI RGCY 8 cut(s) 8, 14, 101, 224, 596, 615, 635, 656
CviKI_1 RGCY 8 cut(s) 8, 14, 101, 224, 596, 615, 635, 656
CviQI GTAC 2 cut(s) 259, 568
DdeI CTNAG 4 cut(s) 107, 225, 234, 456
DpnI GATC 3 cut(s) 270, 380, 464
DpnII GATC 3 cut(s) 268, 378, 462
EaeI YGGCCR 2 cut(s) 594, 633
Eco130I CCWWGG 1 cut(s) 390
Eco57I CTGAAG 1 cut(s) 30
Eco81I CCTNAGG 1 cut(s) 456
EcoRI GAATTC 1 cut(s) 74
EcoT14I CCWWGG 1 cut(s) 390
EcoT22I ATGCAT 1 cut(s) 388
ErhI CCWWGG 1 cut(s) 390
FaeI CATG 1 cut(s) 90
FaiI YATR 7 cut(s) 88, 297, 299, 366, 593, 648, 688
FalI AAGNNNNNCTT 1 cut(s) 35
FatI CATG 1 cut(s) 86
FauNDI CATATG 1 cut(s) 297
Fnu4HI GCNGC 2 cut(s) 6, 30
FokI GGATG 4 cut(s) 242, 251, 260, 373
Fsp4HI GCNGC 2 cut(s) 6, 30
FspBI CTAG 1 cut(s) 428
GlaI GCGC 1 cut(s) 363
GluI GCNGC 2 cut(s) 6, 30
GsuI CTGGAG 1 cut(s) 239
HaeIII GGCC 3 cut(s) 596, 615, 635
HapII CCGG 1 cut(s) 132
HhaI GCGC 1 cut(s) 364
Hin1II CATG 1 cut(s) 90
Hin6I GCGC 1 cut(s) 362
HinP1I GCGC 1 cut(s) 362
HinfI GANTC 2 cut(s) 485, 560
HpaII CCGG 1 cut(s) 132
HphI GGTGA 2 cut(s) 121, 214
Hpy188I TCNGA 5 cut(s) 110, 180, 467, 620, 703
Hpy188III TCNNGA 4 cut(s) 71, 227, 403, 575
HpyAV CCTTC 1 cut(s) 513
HpyCH4III ACNGT 1 cut(s) 514
HpyCH4IV ACGT 2 cut(s) 219, 490
HpyCH4V TGCA 5 cut(s) 86, 344, 373, 386, 449
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 230, 370, 593
HpyF3I CTNAG 4 cut(s) 107, 225, 234, 456
HpySE526I ACGT 2 cut(s) 219, 490
Hsp92II CATG 1 cut(s) 90
HspAI GCGC 1 cut(s) 362
Kzo9I GATC 3 cut(s) 268, 378, 462
LmnI GCTCC 1 cut(s) 180
LpnPI CCDG 7 cut(s) 78, 145, 212, 269, 443, 597, 666
Lsp1109I GCAGC 1 cut(s) 16
LweI GCATC 3 cut(s) 220, 395, 422
MaeI CTAG 1 cut(s) 428
MaeII ACGT 2 cut(s) 219, 490
MaeIII GTNAC 2 cut(s) 532, 544
MalI GATC 3 cut(s) 270, 380, 464
MboI GATC 3 cut(s) 268, 378, 462
MboII GAAGA 4 cut(s) 217, 313, 344, 388
MlsI TGGCCA 2 cut(s) 596, 635
MluCI AATT 1 cut(s) 74
MluNI TGGCCA 2 cut(s) 596, 635
MlyI GAGTC 2 cut(s) 479, 554
MmeI TCCRAC 2 cut(s) 158, 496
MnlI CCTC 9 cut(s) 28, 106, 187, 221, 229, 465, 520, 626, 646
Mox20I TGGCCA 2 cut(s) 596, 635
Mph1103I ATGCAT 1 cut(s) 388
MscI TGGCCA 2 cut(s) 596, 635
MseI TTAA 1 cut(s) 315
Msp20I TGGCCA 2 cut(s) 596, 635
MspI CCGG 1 cut(s) 132
MwoI GCNNNNNNNGC 4 cut(s) 11, 230, 370, 593
NdeI CATATG 1 cut(s) 297
NdeII GATC 3 cut(s) 268, 378, 462
NlaIII CATG 1 cut(s) 90
NmuCI GTSAC 1 cut(s) 532
NsiI ATGCAT 1 cut(s) 388
NspV TTCGAA 2 cut(s) 118, 675
PkrI GCNGC 2 cut(s) 7, 31
PleI GAGTC 2 cut(s) 479, 554
PpsI GAGTC 2 cut(s) 479, 554
Ppu21I YACGTR 1 cut(s) 491
PsiI TTATAA 1 cut(s) 648
RsaI GTAC 2 cut(s) 260, 569
RsaNI GTAC 2 cut(s) 259, 568
SaqAI TTAA 1 cut(s) 315
SatI GCNGC 2 cut(s) 6, 30
Sau3AI GATC 3 cut(s) 268, 378, 462
SchI GAGTC 2 cut(s) 479, 554
SfaNI GCATC 3 cut(s) 220, 395, 422
SfuI TTCGAA 2 cut(s) 118, 675
SmlI CTYRAG 2 cut(s) 69, 401
SmoI CTYRAG 2 cut(s) 69, 401
SpeI ACTAGT 1 cut(s) 427
Sse9I AATT 1 cut(s) 74
SsiI CCGC 3 cut(s) 5, 32, 587
SspMI CTAG 1 cut(s) 428
StyI CCWWGG 1 cut(s) 390
TaaI ACNGT 1 cut(s) 514
TaiI ACGT 2 cut(s) 222, 493
TaqI TCGA 4 cut(s) 118, 282, 675, 712
TaqII GACCGA 2 cut(s) 68, 572
TasI AATT 1 cut(s) 74
TatI WGTACW 1 cut(s) 567
TauI GCSGC 1 cut(s) 8
Tru1I TTAA 1 cut(s) 315
Tru9I TTAA 1 cut(s) 315
TseFI GTSAC 1 cut(s) 532
TseI GCWGC 1 cut(s) 29
Tsp45I GTSAC 1 cut(s) 532
TspDTI ATGAA 2 cut(s) 264, 314
TspGWI ACGGA 1 cut(s) 631
XapI RAATTY 1 cut(s) 74
XcmI CCANNNNNNNNNTGG 1 cut(s) 604
XspI CTAG 1 cut(s) 428
Zsp2I ATGCAT 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.