Rmu_sc0000935.1_g000031

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000935.1
Physical Location & Seq
Forward (+)
167547 .. 171535
3989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000935.1_g000031.1.cds

Sequence Viewer

Length: 3795 bp
atgcctgtactctctgtccttactcccgttgccggaggagtattgagtaaggtggctttacttgctactgatcaattgagactcgaaatcgtcttctgtttccgcaaagagctaaataagctcaaagaatcctcaattctgattggaaatataatccatgatgctgctcacgaacctgaagatggggatctgcgggcaagggccgagtggatgaagaggctgataagcgtagcttatgatgcagaagatattctggataaatttcaatatgaagtttatcggatcgttataaaggagacaagcctcgacaagaagatactcggcttcttctgcaacaatcctcttgtatttcgtctcaaaatggcccgcaagatttacaaaatcaacacatccttggaggatctcaacaagcaagcagctggcgtgggactcgtcagatcaaatggaggtgcagcagcaagtcaaggtaggcgggatcgggaaacaacctcattcccagagaaaaatgtattcaccgggaatgatgcaatcacttttggaagggatgcagtcactgttggaagggatcaggctgtgtcagatataattgcaaccttgaccaactccaacaatcaagaaaatatcctttcggtgatggccattgtgggattgggaggcctaggtaaaacaactttggctcgcttaattaccaagcaactgaaagaaggtgaaatgggaaagcactttgatacaacgctctgggtgtgcgtatctaattcttttgacgtgaattcaattttacatcgaatggtgcagtcatgtggcgtgacgggaatagactcttcaaataagcaagcattgatggaaagcctccagcagaagttggaacaaagaaggtattttcttgtacttgatgacgtttggaatgaggatgctaataggtggaatgatttggggagttgtttgttgcaactaaattctgccaaaggaagctctgtgattgtcaccacccgtagtgccaaggttgcatcaatcatgggaacacttcctaggtggaatttagaaactttatcggaggatgattgctggtccatattgaaggatagagcatttgtagatcctaatgctccgatagcttcagaacaagagaaaatgggaagggagattgcaaaaaagtgtgctggtcttccattggcggcaaaggttttgggtagcttgatgcgttctgaggaatggttgtcaattctaaaaagtcaaatatggcagttatcatccgacaatgaggatagcaggatcatgtcgattttgaagttgagttttgactttttggaatcaccattgaaacaatgttttgcatattgctctatgttcgagagaggttactcaattgaaagagataagttgatccaactatggatggctcaaggttttctccatccttctcatggtcaccaaacctgcaggcaagagattgaaatggaggatataggcaacaagtattatgagactctactggagaactccttatttgaagatgctacaaaggaaaaggatggtgttatcatcatccaatgcaagatgcatgatcttgtgcatgatcttgcaaacaaagtatccatgtgtgagagcttgacaccagacttcactcatgagaagaatgatcatgatatacttattcgacatgttgcacggattcctactccaacgctagaagaaatgtcagaaagaagtattttaagactgcgatcactcttttcaaatggccctgtctctaataccattttccaacagcttatgagtttacgtgtcttaagtttctctagttttgagactgagaagttgccaaatttactcggcaaggcgaagcagttgaggtatctagatctttcctgtacagacgtcgaagcactcccaaagtctattggcaagctctataacctccaaacattgaaattaccgctgcatctcaaagagtgtccaaaggagattcaaaatttgatcaacttgaggcatttttattttggtgagggaatgaaatttgaggctgggtttttggggcggttaactaatctccgaagatggccttcctttaatcagtttcatgtgtgtaagaagagtggtcctgcaattaaggagttgggtggcttgaaccaattgagaggccacttaattattagtgggctagaaggtgtacgggatggagaagaagcaaaggaggctcgcttagtgcagaagagtcacttaagtgagttgacttttcaatggtcgacatttgaatggacaccatggacgcgctgcaggccacccaatgacaatgagacggatgtactagatggcttggaacctcatggtaacttgcaaagcttgaacattgagaatttcaagggtgctagatttccgtcatggataacgagtctccaaaatttgaagcagattcgattagtcgaatgcgacaattgtgaagaagtcccaacacttggccacctgcctaatctaacatctcttgagattaaatggatgaaaaagctgaaacgtctgggagctgagttttatggttatagtgatacactcggcacaactttatttccagctctgaaaacactatccatctattggtgcccagagctcattgaatggacggaagcaccgaggatatcagctgaaggagaagtcgtgaaggtatttcctcgcctcgaacggttgagcattagttgtcgctgcctattgaagatcagctattgtgaggcattatcaagcctagaggttgggctcgattactgcacctctcttcaggagttggagataactgattgccctaatctggtttcaattccaatcgtacagggcatgccgtctctccggaaattgaggattgaaaagtgcgagggattgtcaagcctaggaagtgggctcaacttctgcatctctcttcaggaattagatataagccattgtcataatctaacatcaattccaatcacacagggcatcacatctctccagagcttgatgattgttaaatgtcagagattattaaccctaccgagtgggctccaattctgcacctctcttgaggatctgatgataactcattgccctagtctagaatccatgtcagtatcatatgtgaagtgcgaccacccagaatcaacgaatcaaccggaggaagtctttacaggtgttgttgagtcttcgtccatccaggatgagtattgctctagtctagaatctattccagacttaccgaatcgaccgagggaagtctatacagggcttgttgagtatttgtctatacaggaggaggaggattgccctagtgtagaatctattccacctaatctccgtcactttttgatatgtcattgcgggaaattaaaatatgtgcccacaggaggatttcaccgcctcaatcgtttgaagaggctcacaattggtcccttctgggaggagctggacgccttccctgattttcagcttccacctaattcacaacttgaacagttatggttgtttgggtggcctaagctcaagtctctgccccaacaatctcatcacttgacttgtttaaaacaactccagatatcatattttaagggactagaggctcttcctgagtggttgggaaatcttacatctcttaagtctctgacaatctcatgctgtgagaatctcaagtatctgcctacacaaaatgctatgaaaaacctcaccaaattgaagtttctcgaaattacagaatgtcccctgctcaaggagactggcccagaatggcccaagatttctcacatcccatgcattagcattagtgattggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1264

Amino Acids

142.92

Weight (kDa)

5.98

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 290
AarI CACCTGC 1 cut(s) 2472
AatII GACGTC 1 cut(s) 1881
Acc36I ACCTGC 2 cut(s) 1445, 2472
AccB1I GGYRCC 1 cut(s) 2595
AccB7I CCANNNNNTGG 2 cut(s) 2456, 2592
AccI GTMKAC 1 cut(s) 2246
AccII CGCG 1 cut(s) 2272
AccIII TCCGGA 1 cut(s) 2838
AciI CCGC 9 cut(s) 103, 193, 367, 472, 1175, 1937, 2038, 3345, 3382
AclWI GGATC 9 cut(s) 195, 290, 408, 483, 573, 1091, 1280, 1378, 3063
AcoI YGGCCR 2 cut(s) 636, 2458
AcsI RAATTY 9 cut(s) 260, 769, 955, 1036, 1825, 1972, 2015, 2356, 2401
AcuI CTGAAG 5 cut(s) 198, 1101, 2661, 2753, 2894
AcyI GRCGYC 2 cut(s) 1878, 3435
AfaI GTAC 6 cut(s) 9, 888, 1873, 2172, 2307, 2820
AfiI CCNNNNNNNGG 8 cut(s) 32, 182, 1424, 2456, 2592, 2800, 3371, 3730
AflII CTTAAG 3 cut(s) 1789, 2221, 3617
AflIII ACRYGT 2 cut(s) 1660, 1783
AjiI CACGTC 1 cut(s) 766
AjnI CCWGG 1 cut(s) 3180
AleI CACNNNNGTG 1 cut(s) 2223
Alw21I GWGCWC 1 cut(s) 2607
AlwI GGATC 9 cut(s) 195, 290, 408, 483, 573, 1091, 1280, 1378, 3063
AlwNI CAGNNNCTG 1 cut(s) 554
Aor13HI TCCGGA 1 cut(s) 2838
ApeKI GCWGC 7 cut(s) 164, 416, 452, 455, 1939, 2274, 2697
ApoI RAATTY 9 cut(s) 260, 769, 955, 1036, 1825, 1972, 2015, 2356, 2401
Asp700I GAANNNNTTC 3 cut(s) 249, 3210, 3306
AspA2I CCTAGG 3 cut(s) 658, 1028, 2878
AspLEI GCGC 1 cut(s) 2274
AspS9I GGNCC 8 cut(s) 201, 364, 1068, 1742, 2099, 3413, 3740, 3750
AsuC2I CCSGG 1 cut(s) 517
AsuHPI GGTGA 9 cut(s) 505, 643, 719, 976, 1305, 1421, 2015, 3371, 3679
AvaII GGWCC 3 cut(s) 1068, 2099, 3413
AvrII CCTAGG 3 cut(s) 658, 1028, 2878
BaeGI GKGCMC 2 cut(s) 2600, 3366
BalI TGGCCA 2 cut(s) 638, 2460
BanI GGYRCC 1 cut(s) 2595
BanII GRGCYC 4 cut(s) 2607, 2751, 2892, 3033
BbsI GAAGAC 3 cut(s) 85, 1157, 3162
Bbv12I GWGCWC 1 cut(s) 2607
BbvI GCAGC 7 cut(s) 151, 428, 464, 467, 1926, 2261, 2684
BceAI ACGGC 1 cut(s) 2815
BciT130I CCWGG 1 cut(s) 3182
BciVI GTATCC 1 cut(s) 1603
BclI TGATCA 3 cut(s) 70, 1639, 1977
BcnI CCSGG 1 cut(s) 517
BfmI CTRYAG 2 cut(s) 1438, 2275
BfrI CTTAAG 3 cut(s) 1789, 2221, 3617
BfuAI ACCTGC 2 cut(s) 1445, 2472
BfuI GTATCC 1 cut(s) 1603
BglII AGATCT 1 cut(s) 1861
BisI GCNGC 8 cut(s) 165, 417, 453, 456, 1176, 1940, 2275, 2698
BlnI CCTAGG 3 cut(s) 658, 1028, 2878
BlsI GCNGC 8 cut(s) 166, 418, 454, 457, 1177, 1941, 2276, 2699
Bme1390I CCNGG 2 cut(s) 517, 3182
Bme18I GGWCC 3 cut(s) 1068, 2099, 3413
BmgBI CACGTC 1 cut(s) 766
BmgT120I GGNCC 8 cut(s) 201, 364, 1068, 1742, 2099, 3413, 3740, 3750
BmiI GGNNCC 4 cut(s) 2322, 2597, 3032, 3415
BmrFI CCNGG 2 cut(s) 517, 3182
BpiI GAAGAC 3 cut(s) 85, 1157, 3162
BplI GAGNNNNNCTC 2 cut(s) 3179, 3211
BpmI CTGGAG 4 cut(s) 836, 1514, 2963, 3539
Bpu10I CCTNAGC 1 cut(s) 3501
BpuEI CTTGAG 7 cut(s) 1386, 2005, 2504, 3071, 3491, 3635, 3713
BpuMI CCSGG 1 cut(s) 517
BsaAI YACGTR 1 cut(s) 1784
BsaBI GATNNNNATC 1 cut(s) 186
BsaHI GRCGYC 2 cut(s) 1878, 3435
BsaJI CCNNGG 8 cut(s) 393, 658, 999, 1028, 2264, 2627, 2878, 3233
BsaWI WCCGGW 2 cut(s) 2838, 3139
BsaXI ACNNNNNCTCC 4 cut(s) 2637, 2667, 3303, 3333
Bsc4I CCNNNNNNNGG 8 cut(s) 32, 182, 1424, 2456, 2592, 2800, 3371, 3730
Bse1I ACTGG 2 cut(s) 1497, 3742
Bse3DI GCAATG 2 cut(s) 3070, 3340
Bse8I GATNNNNATC 1 cut(s) 186
BseAI TCCGGA 1 cut(s) 2838
BseBI CCWGG 1 cut(s) 3182
BseDI CCNNGG 8 cut(s) 393, 658, 999, 1028, 2264, 2627, 2878, 3233
BseJI GATNNNNATC 1 cut(s) 186
BseLI CCNNNNNNNGG 8 cut(s) 32, 182, 1424, 2456, 2592, 2800, 3371, 3730
BseMI GCAATG 2 cut(s) 3070, 3340
BseMII CTCAG 4 cut(s) 1197, 1803, 2514, 3582
BseNI ACTGG 2 cut(s) 1497, 3742
BseRI GAGGAG 4 cut(s) 51, 3293, 3296, 3440
BseSI GKGCMC 2 cut(s) 2600, 3366
BseXI GCAGC 7 cut(s) 151, 428, 464, 467, 1926, 2261, 2684
BseYI CCCAGC 1 cut(s) 2024
BsgI GTGCAG 5 cut(s) 471, 812, 2228, 2743, 3025
Bsh1236I CGCG 1 cut(s) 2272
Bsh1285I CGRYCG 1 cut(s) 3233
BshNI GGYRCC 1 cut(s) 2595
BsiEI CGRYCG 1 cut(s) 3233
BsiHKAI GWGCWC 1 cut(s) 2607
BsiSI CCGG 4 cut(s) 33, 516, 2839, 3140
BslFI GGGAC 5 cut(s) 441, 2432, 3399, 3588, 3705
BslI CCNNNNNNNGG 8 cut(s) 32, 182, 1424, 2456, 2592, 2800, 3371, 3730
BsmBI CGTCTC 3 cut(s) 359, 2291, 2838
BsmFI GGGAC 5 cut(s) 441, 2432, 3399, 3588, 3705
BsmI GAATGC 1 cut(s) 2432
Bsp1286I GDGCHC 6 cut(s) 2600, 2607, 2751, 2892, 3033, 3366
Bsp13I TCCGGA 1 cut(s) 2838
Bsp1407I TGTACA 1 cut(s) 1871
Bsp19I CCATGG 1 cut(s) 2264
BspACI CCGC 9 cut(s) 103, 193, 367, 472, 1175, 1937, 2038, 3345, 3382
BspCNI CTCAG 4 cut(s) 1198, 1804, 2515, 3583
BspEI TCCGGA 1 cut(s) 2838
BspFNI CGCG 1 cut(s) 2272
BspHI TCATGA 2 cut(s) 1627, 1642
BspLI GGNNCC 4 cut(s) 2322, 2597, 3032, 3415
BspMAI CTGCAG 2 cut(s) 1442, 2279
BspMI ACCTGC 2 cut(s) 1445, 2472
BspPI GGATC 9 cut(s) 195, 290, 408, 483, 573, 1091, 1280, 1378, 3063
BspQI GCTCTTC 1 cut(s) 3591
BspT107I GGYRCC 1 cut(s) 2595
BspTI CTTAAG 3 cut(s) 1789, 2221, 3617
BsrDI GCAATG 2 cut(s) 3070, 3340
BsrGI TGTACA 1 cut(s) 1871
BsrI ACTGG 2 cut(s) 1497, 3742
BssECI CCNNGG 8 cut(s) 393, 658, 999, 1028, 2264, 2627, 2878, 3233
BssNI GRCGYC 2 cut(s) 1878, 3435
BssT1I CCWWGG 6 cut(s) 393, 658, 999, 1028, 2264, 2878
Bst2UI CCWGG 1 cut(s) 3182
Bst4CI ACNGT 3 cut(s) 556, 2679, 3480
Bst6I CTCTTC 8 cut(s) 209, 826, 2087, 2207, 2772, 2913, 3392, 3591
BstACI GRCGYC 2 cut(s) 1878, 3435
BstAFI CTTAAG 3 cut(s) 1789, 2221, 3617
BstAUI TGTACA 1 cut(s) 1871
BstBAI YACGTR 1 cut(s) 1784
BstDEI CTNAG 6 cut(s) 1206, 1812, 2203, 2523, 3501, 3591
BstDSI CCRYGG 1 cut(s) 2264
BstEII GGTNACC 1 cut(s) 1427
BstENI CCTNNNNNAGG 1 cut(s) 3728
BstFNI CGCG 1 cut(s) 2272
BstHHI GCGC 1 cut(s) 2274
BstMCI CGRYCG 1 cut(s) 3233
BstMWI GCNNNNNNNGC 8 cut(s) 62, 118, 239, 330, 1004, 1112, 2195, 2278
BstNI CCWGG 1 cut(s) 3182
BstNSI RCATGY 2 cut(s) 1664, 2830
BstPI GGTNACC 1 cut(s) 1427
BstSCI CCNGG 2 cut(s) 515, 3180
BstSFI CTRYAG 2 cut(s) 1438, 2275
BstSLI GKGCMC 2 cut(s) 2600, 3366
BstUI CGCG 1 cut(s) 2272
BstV1I GCAGC 7 cut(s) 151, 428, 464, 467, 1926, 2261, 2684
BstV2I GAAGAC 3 cut(s) 85, 1157, 3162
BstX2I RGATCY 5 cut(s) 187, 400, 1096, 1861, 3055
BstYI RGATCY 5 cut(s) 187, 400, 1096, 1861, 3055
BsuI GTATCC 1 cut(s) 1603
BtgI CCRYGG 1 cut(s) 2264
BtrI CACGTC 1 cut(s) 766
BtsIMutI CAGTG 1 cut(s) 552
BveI ACCTGC 2 cut(s) 1445, 2472
CaiI CAGNNNCTG 1 cut(s) 554
CciI TCATGA 2 cut(s) 1627, 1642
CfoI GCGC 1 cut(s) 2274
Cfr13I GGNCC 8 cut(s) 201, 364, 1068, 1742, 2099, 3413, 3740, 3750
CseI GACGC 2 cut(s) 2278, 3443
Csp6I GTAC 6 cut(s) 8, 887, 1872, 2171, 2306, 2819
CviQI GTAC 6 cut(s) 8, 887, 1872, 2171, 2306, 2819
DdeI CTNAG 6 cut(s) 1206, 1812, 2203, 2523, 3501, 3591
DraI TTTAAA 1 cut(s) 3546
EaeI YGGCCR 2 cut(s) 636, 2458
Eam1104I CTCTTC 8 cut(s) 209, 826, 2087, 2207, 2772, 2913, 3392, 3591
EarI CTCTTC 8 cut(s) 209, 826, 2087, 2207, 2772, 2913, 3392, 3591
Ecl136II GAGCTC 1 cut(s) 2605
Eco130I CCWWGG 6 cut(s) 393, 658, 999, 1028, 2264, 2878
Eco147I AGGCCT 1 cut(s) 657
Eco24I GRGCYC 4 cut(s) 2607, 2751, 2892, 3033
Eco32I GATATC 2 cut(s) 2634, 3561
Eco47I GGWCC 3 cut(s) 1068, 2099, 3413
Eco53kI GAGCTC 1 cut(s) 2605
Eco57I CTGAAG 5 cut(s) 198, 1101, 2661, 2753, 2894
Eco91I GGTNACC 1 cut(s) 1427
EcoICRI GAGCTC 1 cut(s) 2605
EcoNI CCTNNNNNAGG 1 cut(s) 3728
EcoO65I GGTNACC 1 cut(s) 1427
EcoRI GAATTC 1 cut(s) 769
EcoRII CCWGG 1 cut(s) 3180
EcoRV GATATC 2 cut(s) 2634, 3561
EcoT14I CCWWGG 6 cut(s) 393, 658, 999, 1028, 2264, 2878
EcoT22I ATGCAT 2 cut(s) 1563, 3776
EcoT38I GRGCYC 4 cut(s) 2607, 2751, 2892, 3033
ErhI CCWWGG 6 cut(s) 393, 658, 999, 1028, 2264, 2878
Esp3I CGTCTC 3 cut(s) 359, 2291, 2838
FalI AAGNNNNNCTT 6 cut(s) 217, 249, 2047, 2079, 2204, 2236
FaqI GGGAC 5 cut(s) 441, 2432, 3399, 3588, 3705
FauI CCCGC 4 cut(s) 186, 374, 465, 3338
FauNDI CATATG 1 cut(s) 3103
FbaI TGATCA 3 cut(s) 70, 1639, 1977
FblI GTMKAC 1 cut(s) 2246
Fnu4HI GCNGC 8 cut(s) 165, 417, 453, 456, 1176, 1940, 2275, 2698
FriOI GRGCYC 4 cut(s) 2607, 2751, 2892, 3033
Fsp4HI GCNGC 8 cut(s) 165, 417, 453, 456, 1176, 1940, 2275, 2698
GlaI GCGC 1 cut(s) 2273
GluI GCNGC 8 cut(s) 165, 417, 453, 456, 1176, 1940, 2275, 2698
GsaI CCCAGC 1 cut(s) 2028
GsuI CTGGAG 4 cut(s) 836, 1514, 2963, 3539
HapII CCGG 4 cut(s) 33, 516, 2839, 3140
HgaI GACGC 2 cut(s) 2278, 3443
HhaI GCGC 1 cut(s) 2274
Hin1I GRCGYC 2 cut(s) 1878, 3435
Hin6I GCGC 1 cut(s) 2272
HinP1I GCGC 1 cut(s) 2272
HincII GTYRAC 3 cut(s) 2043, 2232, 2247
HindII GTYRAC 3 cut(s) 2043, 2232, 2247
HindIII AAGCTT 1 cut(s) 2341
HpaI GTTAAC 1 cut(s) 2043
HpaII CCGG 4 cut(s) 33, 516, 2839, 3140
HphI GGTGA 9 cut(s) 505, 643, 719, 976, 1305, 1421, 2015, 3371, 3679
Hpy166II GTNNAC 5 cut(s) 1781, 2043, 2171, 2232, 2247
Hpy8I GTNNAC 5 cut(s) 1781, 2043, 2171, 2232, 2247
Hpy99I CGWCG 1 cut(s) 1883
HpyCH4III ACNGT 3 cut(s) 556, 2679, 3480
HpyCH4IV ACGT 5 cut(s) 765, 897, 1783, 1878, 2512
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 118, 239, 330, 1004, 1112, 2195, 2278
HpyF3I CTNAG 6 cut(s) 1206, 1812, 2203, 2523, 3501, 3591
HpySE526I ACGT 5 cut(s) 765, 897, 1783, 1878, 2512
Hsp92I GRCGYC 2 cut(s) 1878, 3435
HspAI GCGC 1 cut(s) 2272
Kpn2I TCCGGA 1 cut(s) 2838
Ksp22I TGATCA 3 cut(s) 70, 1639, 1977
KspAI GTTAAC 1 cut(s) 2043
LguI GCTCTTC 1 cut(s) 3591
LmnI GCTCC 4 cut(s) 1111, 2519, 3036, 3427
Lsp1109I GCAGC 7 cut(s) 151, 428, 464, 467, 1926, 2261, 2684
MaeII ACGT 5 cut(s) 765, 897, 1783, 1878, 2512
MaeIII GTNAC 8 cut(s) 550, 805, 982, 1358, 1427, 2216, 2330, 3323
MfeI CAATTG 5 cut(s) 74, 1365, 2132, 2434, 3408
MflI RGATCY 5 cut(s) 187, 400, 1096, 1861, 3055
MhlI GDGCHC 6 cut(s) 2600, 2607, 2751, 2892, 3033, 3366
MlsI TGGCCA 2 cut(s) 638, 2460
MluNI TGGCCA 2 cut(s) 638, 2460
MlyI GAGTC 7 cut(s) 75, 423, 812, 1480, 2224, 2401, 3176
MmeI TCCRAC 8 cut(s) 538, 630, 843, 1278, 1411, 1706, 1789, 2757
Mox20I TGGCCA 2 cut(s) 638, 2460
Mph1103I ATGCAT 2 cut(s) 1563, 3776
MroI TCCGGA 1 cut(s) 2838
MroXI GAANNNNTTC 3 cut(s) 249, 3210, 3306
MscI TGGCCA 2 cut(s) 638, 2460
MslI CAYNNNNRTG 2 cut(s) 2223, 2254
Msp20I TGGCCA 2 cut(s) 638, 2460
MspA1I CMGCKG 3 cut(s) 419, 1939, 2639
MspCI CTTAAG 3 cut(s) 1789, 2221, 3617
MspI CCGG 4 cut(s) 33, 516, 2839, 3140
MspR9I CCNGG 2 cut(s) 517, 3182
MunI CAATTG 5 cut(s) 74, 1365, 2132, 2434, 3408
Mva1269I GAATGC 1 cut(s) 2432
MvaI CCWGG 1 cut(s) 3182
MvnI CGCG 1 cut(s) 2272
MwoI GCNNNNNNNGC 8 cut(s) 62, 118, 239, 330, 1004, 1112, 2195, 2278
NciI CCSGG 1 cut(s) 517
NcoI CCATGG 1 cut(s) 2264
NdeI CATATG 1 cut(s) 3103
NlaIV GGNNCC 4 cut(s) 2322, 2597, 3032, 3415
NmeAIII GCCGAG 4 cut(s) 229, 300, 1812, 2529
NmuCI GTSAC 6 cut(s) 550, 805, 982, 1427, 2216, 3323
NsiI ATGCAT 2 cut(s) 1563, 3776
NspI RCATGY 2 cut(s) 1664, 2830
OliI CACNNNNGTG 1 cut(s) 2223
PaeI GCATGC 1 cut(s) 2830
PagI TCATGA 2 cut(s) 1627, 1642
PaqCI CACCTGC 1 cut(s) 2472
PceI AGGCCT 1 cut(s) 657
PciI ACATGT 1 cut(s) 1660
PciSI GCTCTTC 1 cut(s) 3591
PcsI WCGNNNNNNNCGW 1 cut(s) 2624
PctI GAATGC 1 cut(s) 2432
PdmI GAANNNNTTC 3 cut(s) 249, 3210, 3306
PflMI CCANNNNNTGG 2 cut(s) 2456, 2592
PfoI TCCNGGA 1 cut(s) 3180
PkrI GCNGC 8 cut(s) 166, 418, 454, 457, 1177, 1941, 2276, 2699
PleI GAGTC 7 cut(s) 75, 423, 812, 1480, 2223, 2400, 3175
PpsI GAGTC 7 cut(s) 75, 423, 812, 1480, 2223, 2400, 3175
Ppu21I YACGTR 1 cut(s) 1784
PscI ACATGT 1 cut(s) 1660
PsiI TTATAA 1 cut(s) 290
Psp124BI GAGCTC 1 cut(s) 2607
Psp6I CCWGG 1 cut(s) 3180
PspEI GGTNACC 1 cut(s) 1427
PspFI CCCAGC 1 cut(s) 2024
PspGI CCWGG 1 cut(s) 3180
PspN4I GGNNCC 4 cut(s) 2322, 2597, 3032, 3415
PspPI GGNCC 8 cut(s) 201, 364, 1068, 1742, 2099, 3413, 3740, 3750
PstI CTGCAG 2 cut(s) 1442, 2279
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 5 cut(s) 187, 400, 1096, 1861, 3055
PvuII CAGCTG 2 cut(s) 419, 2639
RsaI GTAC 6 cut(s) 9, 888, 1873, 2172, 2307, 2820
RsaNI GTAC 6 cut(s) 8, 887, 1872, 2171, 2306, 2819
RseI CAYNNNNRTG 2 cut(s) 2223, 2254
SacI GAGCTC 1 cut(s) 2607
SalI GTCGAC 1 cut(s) 2245
SapI GCTCTTC 1 cut(s) 3591
SatI GCNGC 8 cut(s) 165, 417, 453, 456, 1176, 1940, 2275, 2698
Sau96I GGNCC 8 cut(s) 201, 364, 1068, 1742, 2099, 3413, 3740, 3750
SbfI CCTGCAGG 1 cut(s) 1442
SchI GAGTC 7 cut(s) 75, 423, 812, 1480, 2224, 2401, 3176
ScrFI CCNGG 2 cut(s) 517, 3182
SdaI CCTGCAGG 1 cut(s) 1442
SduI GDGCHC 6 cut(s) 2600, 2607, 2751, 2892, 3033, 3366
SfcI CTRYAG 2 cut(s) 1438, 2275
SinI GGWCC 3 cut(s) 1068, 2099, 3413
SmiMI CAYNNNNRTG 2 cut(s) 2223, 2254
SphI GCATGC 1 cut(s) 2830
Sse8387I CCTGCAGG 1 cut(s) 1442
SseBI AGGCCT 1 cut(s) 657
SsiI CCGC 9 cut(s) 103, 193, 367, 472, 1175, 1937, 2038, 3345, 3382
SstI GAGCTC 1 cut(s) 2607
StuI AGGCCT 1 cut(s) 657
StyD4I CCNGG 2 cut(s) 515, 3180
StyI CCWWGG 6 cut(s) 393, 658, 999, 1028, 2264, 2878
TaaI ACNGT 3 cut(s) 556, 2679, 3480
TaiI ACGT 5 cut(s) 768, 900, 1786, 1881, 2515
TaqII GACCGA 1 cut(s) 3247
TatI WGTACW 4 cut(s) 7, 886, 1871, 2305
TauI GCSGC 1 cut(s) 1178
TscAI CASTG 1 cut(s) 559
TseFI GTSAC 6 cut(s) 550, 805, 982, 1427, 2216, 3323
TseI GCWGC 7 cut(s) 164, 416, 452, 455, 1939, 2274, 2697
Tsp45I GTSAC 6 cut(s) 550, 805, 982, 1427, 2216, 3323
TspDTI ATGAA 6 cut(s) 227, 285, 2027, 2069, 2513, 3692
TspGWI ACGGA 5 cut(s) 1684, 2315, 2367, 2633, 3311
TspRI CASTG 1 cut(s) 559
Van91I CCANNNNNTGG 2 cut(s) 2456, 2592
Vha464I CTTAAG 3 cut(s) 1789, 2221, 3617
VpaK11BI GGWCC 3 cut(s) 1068, 2099, 3413
XagI CCTNNNNNAGG 1 cut(s) 3728
XapI RAATTY 9 cut(s) 260, 769, 955, 1036, 1825, 1972, 2015, 2356, 2401
XbaI TCTAGA 3 cut(s) 1858, 3082, 3202
XceI RCATGY 2 cut(s) 1664, 2830
XcmI CCANNNNNNNNNTGG 2 cut(s) 646, 1421
XmaJI CCTAGG 3 cut(s) 658, 1028, 2878
XmiI GTMKAC 1 cut(s) 2246
XmnI GAANNNNTTC 3 cut(s) 249, 3210, 3306
ZraI GACGTC 1 cut(s) 1879
Zsp2I ATGCAT 2 cut(s) 1563, 3776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.