Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 12 - 94 | 3.2e-11 | Rx N-terminal domain |
| NB-ARC | PF00931 | 183 - 361 | 7.1e-30 | NB-ARC domain |
| WHD_DRP | PF23559 | 451 - 525 | 1.1e-17 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 568 - 782 | 2.8e-27 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 695 - 825 | 1.6e-31 | R13L1/DRL21 LRRs |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 224, 237, 290 |
| Acc36I | ACCTGC | 1 cut(s) | 1231 |
| Acc65I | GGTACC | 1 cut(s) | 2233 |
| AccB1I | GGYRCC | 1 cut(s) | 2233 |
| AccI | GTMKAC | 1 cut(s) | 2695 |
| AccII | CGCG | 1 cut(s) | 105 |
| AccIII | TCCGGA | 1 cut(s) | 2451 |
| AciI | CCGC | 3 cut(s) | 27, 103, 1160 |
| AclWI | GGATC | 7 cut(s) | 555, 1076, 1113, 1277, 1375, 2435, 2676 |
| AcoI | YGGCCR | 1 cut(s) | 618 |
| AcsI | RAATTY | 7 cut(s) | 512, 940, 1754, 1957, 2000, 2733, 2991 |
| AcuI | CTGAAG | 4 cut(s) | 198, 1847, 2367, 2507 |
| AcyI | GRCGYC | 1 cut(s) | 2901 |
| AfaI | GTAC | 8 cut(s) | 9, 704, 873, 2184, 2235, 2259, 2766, 2785 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1421, 2254, 2725 |
| AflII | CTTAAG | 2 cut(s) | 1774, 2197 |
| AflIII | ACRYGT | 3 cut(s) | 1642, 1768, 2143 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2482 |
| AjiI | CACGTC | 1 cut(s) | 790 |
| AjnI | CCWGG | 1 cut(s) | 303 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 810, 842, 2162, 2194, 2784, 2816 |
| Alw21I | GWGCWC | 1 cut(s) | 2834 |
| Alw26I | GTCTC | 9 cut(s) | 73, 290, 359, 1022, 1472, 1738, 1781, 2982, 3093 |
| Alw44I | GTGCAC | 1 cut(s) | 2830 |
| AlwI | GGATC | 7 cut(s) | 555, 1076, 1113, 1277, 1375, 2435, 2676 |
| Ama87I | CYCGRG | 2 cut(s) | 1346, 2972 |
| Aor13HI | TCCGGA | 1 cut(s) | 2451 |
| AoxI | GGCC | 5 cut(s) | 201, 618, 637, 2116, 2963 |
| ApaLI | GTGCAC | 1 cut(s) | 2830 |
| ApeKI | GCWGC | 5 cut(s) | 29, 164, 416, 461, 464 |
| ApoI | RAATTY | 7 cut(s) | 512, 940, 1754, 1957, 2000, 2733, 2991 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 603, 1008, 2369, 2796 |
| Asp718I | GGTACC | 1 cut(s) | 2233 |
| AspA2I | CCTAGG | 3 cut(s) | 640, 1013, 2491 |
| AspLEI | GCGC | 1 cut(s) | 1707 |
| AspS9I | GGNCC | 3 cut(s) | 201, 1053, 2075 |
| AvaI | CYCGRG | 2 cut(s) | 1346, 2972 |
| AvaII | GGWCC | 2 cut(s) | 1053, 2075 |
| AvrII | CCTAGG | 3 cut(s) | 640, 1013, 2491 |
| BaeGI | GKGCMC | 1 cut(s) | 2834 |
| BalI | TGGCCA | 1 cut(s) | 620 |
| BanI | GGYRCC | 1 cut(s) | 2233 |
| BanII | GRGCYC | 2 cut(s) | 2505, 2646 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 40, 72 |
| BbsI | GAAGAC | 1 cut(s) | 2870 |
| Bbv12I | GWGCWC | 1 cut(s) | 2834 |
| BbvI | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| BccI | CCATC | 8 cut(s) | 355, 610, 852, 1387, 1419, 1615, 2147, 2258 |
| BceAI | ACGGC | 1 cut(s) | 2766 |
| BciT130I | CCWGG | 1 cut(s) | 305 |
| BciVI | GTATCC | 1 cut(s) | 1591 |
| BclI | TGATCA | 2 cut(s) | 70, 1962 |
| BcoDI | GTCTC | 9 cut(s) | 73, 290, 359, 1022, 1472, 1738, 1781, 2982, 3093 |
| BfmI | CTRYAG | 2 cut(s) | 1512, 2787 |
| BfrI | CTTAAG | 2 cut(s) | 1774, 2197 |
| BfuAI | ACCTGC | 1 cut(s) | 1231 |
| BfuI | GTATCC | 1 cut(s) | 1591 |
| BglII | AGATCT | 1 cut(s) | 1846 |
| BisI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| BlnI | CCTAGG | 3 cut(s) | 640, 1013, 2491 |
| BlsI | GCNGC | 6 cut(s) | 31, 166, 418, 463, 466, 1162 |
| Bme1390I | CCNGG | 1 cut(s) | 305 |
| Bme18I | GGWCC | 2 cut(s) | 1053, 2075 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2482 |
| BmeT110I | CYCGRG | 2 cut(s) | 1346, 2972 |
| BmgBI | CACGTC | 1 cut(s) | 790 |
| BmgT120I | GGNCC | 3 cut(s) | 201, 1053, 2075 |
| BmiI | GGNNCC | 6 cut(s) | 101, 1357, 1656, 2235, 2274, 2645 |
| BmrFI | CCNGG | 1 cut(s) | 305 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2403 |
| BpiI | GAAGAC | 1 cut(s) | 2870 |
| BpmI | CTGGAG | 2 cut(s) | 816, 821 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2967 |
| BsaAI | YACGTR | 1 cut(s) | 1769 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2426 |
| BsaHI | GRCGYC | 1 cut(s) | 2901 |
| BsaI | GGTCTC | 2 cut(s) | 290, 1738 |
| BsaJI | CCNNGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| BsaWI | WCCGGW | 2 cut(s) | 2451, 2767 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 30, 2343, 2346, 2373, 2376 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1421, 2254, 2725 |
| Bse118I | RCCGGY | 1 cut(s) | 32 |
| Bse1I | ACTGG | 2 cut(s) | 420, 799 |
| Bse3DI | GCAATG | 3 cut(s) | 1128, 1210, 2776 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2426 |
| BseAI | TCCGGA | 1 cut(s) | 2451 |
| BseBI | CCWGG | 1 cut(s) | 305 |
| BseDI | CCNNGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| BseJI | GATNNNNATC | 1 cut(s) | 2426 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1421, 2254, 2725 |
| BseMI | GCAATG | 3 cut(s) | 1128, 1210, 2776 |
| BseMII | CTCAG | 4 cut(s) | 678, 1782, 3048, 3083 |
| BseNI | ACTGG | 2 cut(s) | 420, 799 |
| BseRI | GAGGAG | 6 cut(s) | 2081, 2367, 2738, 2741, 2786, 2906 |
| BseSI | GKGCMC | 1 cut(s) | 2834 |
| BseXI | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| BseYI | CCCAGC | 1 cut(s) | 2009 |
| BsgI | GTGCAG | 3 cut(s) | 480, 2497, 2638 |
| Bsh1236I | CGCG | 1 cut(s) | 105 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2810 |
| BshFI | GGCC | 5 cut(s) | 203, 620, 639, 2118, 2965 |
| BshNI | GGYRCC | 1 cut(s) | 2233 |
| BsiEI | CGRYCG | 1 cut(s) | 2810 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2834 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1346, 2972 |
| BsiSI | CCGG | 3 cut(s) | 33, 2452, 2768 |
| BslFI | GGGAC | 3 cut(s) | 441, 1139, 3054 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1421, 2254, 2725 |
| BsmAI | GTCTC | 9 cut(s) | 73, 290, 359, 1022, 1472, 1738, 1781, 2982, 3093 |
| BsmBI | CGTCTC | 1 cut(s) | 359 |
| BsmFI | GGGAC | 3 cut(s) | 441, 1139, 3054 |
| BsmI | GAATGC | 2 cut(s) | 774, 1186 |
| BsnI | GGCC | 5 cut(s) | 203, 620, 639, 2118, 2965 |
| Bso31I | GGTCTC | 2 cut(s) | 290, 1738 |
| BsoBI | CYCGRG | 2 cut(s) | 1346, 2972 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2505, 2646, 2834 |
| Bsp13I | TCCGGA | 1 cut(s) | 2451 |
| BspACI | CCGC | 3 cut(s) | 27, 103, 1160 |
| BspANI | GGCC | 5 cut(s) | 203, 620, 639, 2118, 2965 |
| BspCNI | CTCAG | 4 cut(s) | 677, 1783, 3049, 3084 |
| BspEI | TCCGGA | 1 cut(s) | 2451 |
| BspFNI | CGCG | 1 cut(s) | 105 |
| BspHI | TCATGA | 3 cut(s) | 169, 1615, 1630 |
| BspLI | GGNNCC | 6 cut(s) | 101, 1357, 1656, 2235, 2274, 2645 |
| BspMI | ACCTGC | 1 cut(s) | 1231 |
| BspPI | GGATC | 7 cut(s) | 555, 1076, 1113, 1277, 1375, 2435, 2676 |
| BspQI | GCTCTTC | 1 cut(s) | 3057 |
| BspT107I | GGYRCC | 1 cut(s) | 2233 |
| BspTI | CTTAAG | 2 cut(s) | 1774, 2197 |
| BspTNI | GGTCTC | 2 cut(s) | 290, 1738 |
| BsrDI | GCAATG | 3 cut(s) | 1128, 1210, 2776 |
| BsrFI | RCCGGY | 1 cut(s) | 32 |
| BsrI | ACTGG | 2 cut(s) | 420, 799 |
| BssAI | RCCGGY | 1 cut(s) | 32 |
| BssECI | CCNNGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| BssNI | GRCGYC | 1 cut(s) | 2901 |
| BssT1I | CCWWGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| Bst2UI | CCWGG | 1 cut(s) | 305 |
| Bst4CI | ACNGT | 4 cut(s) | 1199, 2309, 2836, 3180 |
| Bst6I | CTCTTC | 5 cut(s) | 102, 209, 2379, 2526, 3057 |
| BstACI | GRCGYC | 1 cut(s) | 2901 |
| BstAFI | CTTAAG | 2 cut(s) | 1774, 2197 |
| BstBAI | YACGTR | 1 cut(s) | 1769 |
| BstC8I | GCNNGC | 7 cut(s) | 34, 367, 414, 661, 1823, 1892, 2176 |
| BstDEI | CTNAG | 6 cut(s) | 664, 1191, 1791, 2967, 3057, 3092 |
| BstEII | GGTNACC | 1 cut(s) | 1424 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2723 |
| BstFNI | CGCG | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 1707 |
| BstMAI | GTCTC | 9 cut(s) | 73, 290, 359, 1022, 1472, 1738, 1781, 2982, 3093 |
| BstMCI | CGRYCG | 1 cut(s) | 2810 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 239, 330, 989, 2171 |
| BstNI | CCWGG | 1 cut(s) | 305 |
| BstNSI | RCATGY | 3 cut(s) | 416, 1646, 2147 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2403 |
| BstPI | GGTNACC | 1 cut(s) | 1424 |
| BstSCI | CCNGG | 1 cut(s) | 303 |
| BstSFI | CTRYAG | 2 cut(s) | 1512, 2787 |
| BstSLI | GKGCMC | 1 cut(s) | 2834 |
| BstUI | CGCG | 1 cut(s) | 105 |
| BstV1I | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| BstV2I | GAAGAC | 1 cut(s) | 2870 |
| BstX2I | RGATCY | 4 cut(s) | 1081, 1105, 1846, 2668 |
| BstYI | RGATCY | 4 cut(s) | 1081, 1105, 1846, 2668 |
| BsuI | GTATCC | 1 cut(s) | 1591 |
| BsuRI | GGCC | 5 cut(s) | 203, 620, 639, 2118, 2965 |
| BtgZI | GCGATG | 1 cut(s) | 2425 |
| BtrI | CACGTC | 1 cut(s) | 790 |
| BtsIMutI | CAGTG | 1 cut(s) | 427 |
| BveI | ACCTGC | 1 cut(s) | 1231 |
| Cac8I | GCNNGC | 7 cut(s) | 34, 367, 414, 661, 1823, 1892, 2176 |
| CciI | TCATGA | 3 cut(s) | 169, 1615, 1630 |
| CfoI | GCGC | 1 cut(s) | 1707 |
| Cfr10I | RCCGGY | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 3 cut(s) | 201, 1053, 2075 |
| CseI | GACGC | 2 cut(s) | 2875, 2909 |
| Csp6I | GTAC | 8 cut(s) | 8, 703, 872, 2183, 2234, 2258, 2765, 2784 |
| CviQI | GTAC | 8 cut(s) | 8, 703, 872, 2183, 2234, 2258, 2765, 2784 |
| DdeI | CTNAG | 6 cut(s) | 664, 1191, 1791, 2967, 3057, 3092 |
| DraI | TTTAAA | 1 cut(s) | 3012 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2482 |
| EaeI | YGGCCR | 1 cut(s) | 618 |
| Eam1104I | CTCTTC | 5 cut(s) | 102, 209, 2379, 2526, 3057 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2482 |
| EarI | CTCTTC | 5 cut(s) | 102, 209, 2379, 2526, 3057 |
| Eco130I | CCWWGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| Eco147I | AGGCCT | 1 cut(s) | 639 |
| Eco24I | GRGCYC | 2 cut(s) | 2505, 2646 |
| Eco31I | GGTCTC | 2 cut(s) | 290, 1738 |
| Eco32I | GATATC | 3 cut(s) | 88, 1841, 2340 |
| Eco47I | GGWCC | 2 cut(s) | 1053, 2075 |
| Eco57I | CTGAAG | 4 cut(s) | 198, 1847, 2367, 2507 |
| Eco88I | CYCGRG | 2 cut(s) | 1346, 2972 |
| Eco91I | GGTNACC | 1 cut(s) | 1424 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2723 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2075 |
| EcoO65I | GGTNACC | 1 cut(s) | 1424 |
| EcoRI | GAATTC | 1 cut(s) | 512 |
| EcoRII | CCWGG | 1 cut(s) | 303 |
| EcoRV | GATATC | 3 cut(s) | 88, 1841, 2340 |
| EcoT14I | CCWWGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| EcoT22I | ATGCAT | 2 cut(s) | 1188, 1563 |
| EcoT38I | GRGCYC | 2 cut(s) | 2505, 2646 |
| ErhI | CCWWGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| Esp3I | CGTCTC | 1 cut(s) | 359 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 217, 249, 2032, 2064, 2162, 2194, 2180, 2212 |
| FaqI | GGGAC | 3 cut(s) | 441, 1139, 3054 |
| FauNDI | CATATG | 1 cut(s) | 781 |
| FbaI | TGATCA | 2 cut(s) | 70, 1962 |
| FblI | GTMKAC | 1 cut(s) | 2695 |
| Fnu4HI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| FriOI | GRGCYC | 2 cut(s) | 2505, 2646 |
| Fsp4HI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| GlaI | GCGC | 1 cut(s) | 1706 |
| GluI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| GsaI | CCCAGC | 1 cut(s) | 2013 |
| GsuI | CTGGAG | 2 cut(s) | 816, 821 |
| HaeIII | GGCC | 5 cut(s) | 203, 620, 639, 2118, 2965 |
| HapII | CCGG | 3 cut(s) | 33, 2452, 2768 |
| HgaI | GACGC | 2 cut(s) | 2875, 2909 |
| HhaI | GCGC | 1 cut(s) | 1707 |
| Hin1I | GRCGYC | 1 cut(s) | 2901 |
| Hin6I | GCGC | 1 cut(s) | 1705 |
| HinP1I | GCGC | 1 cut(s) | 1705 |
| HincII | GTYRAC | 2 cut(s) | 502, 2208 |
| HindII | GTYRAC | 2 cut(s) | 502, 2208 |
| HindIII | AAGCTT | 2 cut(s) | 1177, 2293 |
| HpaI | GTTAAC | 1 cut(s) | 2208 |
| HpaII | CCGG | 3 cut(s) | 33, 2452, 2768 |
| Hpy166II | GTNNAC | 5 cut(s) | 502, 2185, 2208, 2696, 2832 |
| Hpy8I | GTNNAC | 5 cut(s) | 502, 2185, 2208, 2696, 2832 |
| Hpy99I | CGWCG | 1 cut(s) | 791 |
| HpyAV | CCTTC | 9 cut(s) | 537, 680, 1110, 1116, 1425, 1939, 2164, 2342, 2914 |
| HpyCH4III | ACNGT | 4 cut(s) | 1199, 2309, 2836, 3180 |
| HpyCH4IV | ACGT | 3 cut(s) | 789, 882, 1768 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 239, 330, 989, 2171 |
| HpyF3I | CTNAG | 6 cut(s) | 664, 1191, 1791, 2967, 3057, 3092 |
| HpySE526I | ACGT | 3 cut(s) | 789, 882, 1768 |
| Hsp92I | GRCGYC | 1 cut(s) | 2901 |
| HspAI | GCGC | 1 cut(s) | 1705 |
| Kpn2I | TCCGGA | 1 cut(s) | 2451 |
| KpnI | GGTACC | 1 cut(s) | 2237 |
| KroI | GCCGGC | 1 cut(s) | 32 |
| KroNI | GCCGGC | 1 cut(s) | 34 |
| Ksp22I | TGATCA | 2 cut(s) | 70, 1962 |
| KspAI | GTTAAC | 1 cut(s) | 2208 |
| LguI | GCTCTTC | 1 cut(s) | 3057 |
| LmnI | GCTCC | 8 cut(s) | 797, 1096, 1343, 2649, 2773, 2874, 2893, 3178 |
| Lsp1109I | GCAGC | 5 cut(s) | 16, 151, 428, 473, 476 |
| MaeII | ACGT | 3 cut(s) | 789, 882, 1768 |
| MfeI | CAATTG | 4 cut(s) | 74, 1362, 2108, 2401 |
| MflI | RGATCY | 4 cut(s) | 1081, 1105, 1846, 2668 |
| MhlI | GDGCHC | 3 cut(s) | 2505, 2646, 2834 |
| MlsI | TGGCCA | 1 cut(s) | 620 |
| MluNI | TGGCCA | 1 cut(s) | 620 |
| MlyI | GAGTC | 9 cut(s) | 75, 423, 1024, 1474, 1889, 2200, 2426, 2984, 3095 |
| MmeI | TCCRAC | 4 cut(s) | 520, 612, 1408, 2597 |
| Mox20I | TGGCCA | 1 cut(s) | 620 |
| Mph1103I | ATGCAT | 2 cut(s) | 1188, 1563 |
| MroI | TCCGGA | 1 cut(s) | 2451 |
| MroNI | GCCGGC | 1 cut(s) | 32 |
| MroXI | GAANNNNTTC | 4 cut(s) | 603, 1008, 2369, 2796 |
| MscI | TGGCCA | 1 cut(s) | 620 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2215 |
| Msp20I | TGGCCA | 1 cut(s) | 620 |
| MspA1I | CMGCKG | 2 cut(s) | 29, 2345 |
| MspCI | CTTAAG | 2 cut(s) | 1774, 2197 |
| MspI | CCGG | 3 cut(s) | 33, 2452, 2768 |
| MspR9I | CCNGG | 1 cut(s) | 305 |
| MunI | CAATTG | 4 cut(s) | 74, 1362, 2108, 2401 |
| Mva1269I | GAATGC | 2 cut(s) | 774, 1186 |
| MvaI | CCWGG | 1 cut(s) | 305 |
| MvnI | CGCG | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 239, 330, 989, 2171 |
| NaeI | GCCGGC | 1 cut(s) | 34 |
| NdeI | CATATG | 1 cut(s) | 781 |
| NgoMIV | GCCGGC | 1 cut(s) | 32 |
| NlaIV | GGNNCC | 6 cut(s) | 101, 1357, 1656, 2235, 2274, 2645 |
| NmeAIII | GCCGAG | 2 cut(s) | 300, 411 |
| NmuCI | GTSAC | 7 cut(s) | 52, 790, 967, 1424, 2192, 2405, 2474 |
| NsiI | ATGCAT | 2 cut(s) | 1188, 1563 |
| NspI | RCATGY | 3 cut(s) | 416, 1646, 2147 |
| PaeI | GCATGC | 1 cut(s) | 416 |
| PaeR7I | CTCGAG | 2 cut(s) | 1346, 2972 |
| PagI | TCATGA | 3 cut(s) | 169, 1615, 1630 |
| PceI | AGGCCT | 1 cut(s) | 639 |
| PciI | ACATGT | 2 cut(s) | 1642, 2143 |
| PciSI | GCTCTTC | 1 cut(s) | 3057 |
| PctI | GAATGC | 2 cut(s) | 774, 1186 |
| PdiI | GCCGGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 4 cut(s) | 603, 1008, 2369, 2796 |
| PkrI | GCNGC | 6 cut(s) | 31, 166, 418, 463, 466, 1162 |
| PleI | GAGTC | 9 cut(s) | 75, 423, 1024, 1474, 1888, 2199, 2425, 2983, 3094 |
| PpsI | GAGTC | 9 cut(s) | 75, 423, 1024, 1474, 1888, 2199, 2425, 2983, 3094 |
| Ppu21I | YACGTR | 1 cut(s) | 1769 |
| PpuMI | RGGWCCY | 1 cut(s) | 2075 |
| PscI | ACATGT | 2 cut(s) | 1642, 2143 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2403 |
| PsiI | TTATAA | 3 cut(s) | 224, 237, 290 |
| Psp5II | RGGWCCY | 1 cut(s) | 2075 |
| Psp6I | CCWGG | 1 cut(s) | 303 |
| PspEI | GGTNACC | 1 cut(s) | 1424 |
| PspFI | CCCAGC | 1 cut(s) | 2009 |
| PspGI | CCWGG | 1 cut(s) | 303 |
| PspN4I | GGNNCC | 6 cut(s) | 101, 1357, 1656, 2235, 2274, 2645 |
| PspPI | GGNCC | 3 cut(s) | 201, 1053, 2075 |
| PspPPI | RGGWCCY | 1 cut(s) | 2075 |
| PspXI | VCTCGAGB | 1 cut(s) | 2972 |
| PsuI | RGATCY | 4 cut(s) | 1081, 1105, 1846, 2668 |
| PvuII | CAGCTG | 1 cut(s) | 2345 |
| RsaI | GTAC | 8 cut(s) | 9, 704, 873, 2184, 2235, 2259, 2766, 2785 |
| RsaNI | GTAC | 8 cut(s) | 8, 703, 872, 2183, 2234, 2258, 2765, 2784 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2215 |
| SapI | GCTCTTC | 1 cut(s) | 3057 |
| SatI | GCNGC | 6 cut(s) | 30, 165, 417, 462, 465, 1161 |
| Sau96I | GGNCC | 3 cut(s) | 201, 1053, 2075 |
| SchI | GAGTC | 9 cut(s) | 75, 423, 1024, 1474, 1889, 2200, 2426, 2984, 3095 |
| ScrFI | CCNGG | 1 cut(s) | 305 |
| SduI | GDGCHC | 3 cut(s) | 2505, 2646, 2834 |
| SfcI | CTRYAG | 2 cut(s) | 1512, 2787 |
| Sfr274I | CTCGAG | 2 cut(s) | 1346, 2972 |
| SinI | GGWCC | 2 cut(s) | 1053, 2075 |
| SlaI | CTCGAG | 2 cut(s) | 1346, 2972 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2215 |
| SphI | GCATGC | 1 cut(s) | 416 |
| SseBI | AGGCCT | 1 cut(s) | 639 |
| SsiI | CCGC | 3 cut(s) | 27, 103, 1160 |
| SspI | AATATT | 2 cut(s) | 604, 2464 |
| StuI | AGGCCT | 1 cut(s) | 639 |
| StyD4I | CCNGG | 1 cut(s) | 303 |
| StyI | CCWWGG | 6 cut(s) | 393, 640, 984, 1013, 1922, 2491 |
| TaaI | ACNGT | 4 cut(s) | 1199, 2309, 2836, 3180 |
| TaiI | ACGT | 3 cut(s) | 792, 885, 1771 |
| TaqI | TCGA | 8 cut(s) | 84, 766, 1347, 1639, 2382, 2420, 2973, 3147 |
| TaqII | GACCGA | 1 cut(s) | 2796 |
| TatI | WGTACW | 2 cut(s) | 7, 871 |
| TauI | GCSGC | 1 cut(s) | 1163 |
| TscAI | CASTG | 1 cut(s) | 427 |
| TseFI | GTSAC | 7 cut(s) | 52, 790, 967, 1424, 2192, 2405, 2474 |
| TseI | GCWGC | 5 cut(s) | 29, 164, 416, 461, 464 |
| Tsp45I | GTSAC | 7 cut(s) | 52, 790, 967, 1424, 2192, 2405, 2474 |
| TspGWI | ACGGA | 2 cut(s) | 2267, 2319 |
| TspRI | CASTG | 1 cut(s) | 427 |
| Vha464I | CTTAAG | 2 cut(s) | 1774, 2197 |
| VneI | GTGCAC | 1 cut(s) | 2830 |
| VpaK11BI | GGWCC | 2 cut(s) | 1053, 2075 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2723 |
| XapI | RAATTY | 7 cut(s) | 512, 940, 1754, 1957, 2000, 2733, 2991 |
| XbaI | TCTAGA | 3 cut(s) | 1024, 1108, 1843 |
| XceI | RCATGY | 3 cut(s) | 416, 1646, 2147 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 628, 1418 |
| XhoI | CTCGAG | 2 cut(s) | 1346, 2972 |
| XmaJI | CCTAGG | 3 cut(s) | 640, 1013, 2491 |
| XmiI | GTMKAC | 1 cut(s) | 2695 |
| XmnI | GAANNNNTTC | 4 cut(s) | 603, 1008, 2369, 2796 |
| Zsp2I | ATGCAT | 2 cut(s) | 1188, 1563 |