Rmu_sc0009516.1_g000005

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009516.1
Physical Location & Seq
Forward (+)
22691 .. 26071
3381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009516.1_g000005.1.cds

Sequence Viewer

Length: 2808 bp
atgttcatcaaagattttgatattgaaaaggatgacttgatccaactttggatggctcagggatggcttcacccttgttccgacaaaagcctagagatggaggagaggggtaatcaatattttaatattttattggggaagtctttatttcaagacgttacaaaggattatggtggtaatgttacgaaatgtaagatgcacgatcttgtgcatgatcttgcagaacatgtatcaaaatcagggaacttacgctcacttttttcaaatggagaagaccttgggagcaacttacttaacttgaaatccttacgtgtcttaaacttatacaaggcagatattgaggtgttgccggattctgttggaaagttgaaacacttgaggtatttgaatgtattgaaaacaagaatgaaagcacttcccaaatctattgggaagctttataatctgcagacactgaaaataccttatcaccttgaagagtttccaagggaaattgcaaatttgataaacttgcggcacatttattttggtagatatatgaaagtttcaggtgagatattgggacggttcactaatctccggtcattaccttttctcaaggtgggtaaagagacaggtccgagaattgaggaattgagtggtttaaaccacttgcacaacaccttgtctatttatggactggaaaatgtaggagatggagaagaagcgcagaaagcaaacttagtagagaagaaacacatatgcaagttaatccttggatggaagctcagtgggccaagccacaatgcggagaatgacgacgatgtactagaaggtccaagccataatgtggagaatgacgacgatgtactagaaggccttcgaccacattctagtttggaatttttggagattcatggattcatgggtactaaatttccatcatggttattgctagcaaacaatttgaaagagattgaattattgggctgcaacaaatgtgaaggagtcccagtacttgggcatttaccgaatcttagttgtgttaagatcaagggaatggagaaactaactcgtataggatccgagttttacggggataatcatgttaactgtggaaatggatcaagtaaggagccacggcctttgttccttgctttgaaaacattgcatattgaggaggcaccgaacctgattgaatggatggaagcgccaacagagagaggaagtaggatggtgtttccttgccttgaggagctgaccttgattaactgtaaccaactgagacgtgctcccagtcattttccatctctcaagaagttggtgatagaacacatgagaagcggaggcatgccaatagcaagtattctaagcaatcaactcaagactctcacttatctctgcttacacgttgtgagcggactgacttgtctgccggaagggatgttagaaaacaacaagaatcttgcacatttggaaatgcagagttgttgggagttaacttgtatttctccccaatcacaaggatctcaatactgctgcgcatctctttcatatttggagatacggttttgtcagcgtctgacaaatttacctgatgggctactcacaccttctcttaaacagctgacgttgcaacattgttacgatctagagtacatcccagatgctacacgcggtggcctcacatcccttgaaatattgattgtgacggactgctctaaaataacgtccattccattttcacaaggcctcccgtctcttgatgtattaattatagacagctgtcgggaattatcaagcctaccgggtggactggaatactgtacctctattcggagtttaacaataacatggtgccctaaggtaccatccatttccaattccattgaaagtctgagtacatccctccaacagttgtgtgtaaataatctagactctcttccaatttcacgaggaggcttcacatcactccgtcaattgacaatccaaaactacgaaagtgcacaaatggggccagaatttattgcctttcttcaaacccttgaatctcttcaaaaattgaggatacggttttgcaataatctagagactattccgagttcagacaagctcacatccctccgcagcttggagatttctcattgtcgtaaattaacatgtctaccggatgggttagcagcatcgtcacagtcctacagcctcacccgtttgaaggaattgataattggtcctttctggtcagagctcgatgcattcccagctttccaggctattccacagcttgaatcattatacatattagggtggccgaagctcaagtccctccctgagcaaattcaacacttgccttctttaagacatttgaaaatagaggactttgacggagtggagactattccagaatggttgggaaaccttgcatctcttgaggacctgactgttgtgttttgcaacagtctaatgtatctaccttctgtggaagctatgcaacgcctcaccaaattgaaagagatacacatccgctattgtgaccttctagaagaaagatgcagggaggagaccggcccagagtggcctaagattcgtaattttccattcatccagagtaggactgttcaatctttgaatgctctcaatcgaaaaatgcttcacttacttggtgtttcttcaatgctgctggttgcctcgaagtatgaggggatcacacctccacatgttggagagttgtgttacataacagataaacatgctccaaggaagagggtgtgtaaatggaggcttatatacttaaggccttgtagtttgatttgcgcaatcctacaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

935

Amino Acids

105.59

Weight (kDa)

6.51

Isoelectric Point (pI)

50.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 441
AasI GACNNNNNNGTC 1 cut(s) 1407
Acc16I TGCGCA 2 cut(s) 1522, 2794
Acc65I GGTACC 1 cut(s) 1846
AccB1I GGYRCC 3 cut(s) 1162, 1836, 1846
AccB7I CCANNNNNTGG 3 cut(s) 829, 998, 2699
AccBSI CCGCTC 1 cut(s) 1398
AccI GTMKAC 1 cut(s) 2143
AccII CGCG 1 cut(s) 1656
AciI CCGC 7 cut(s) 514, 788, 1323, 1398, 1656, 2104, 2503
AclWI GGATC 6 cut(s) 34, 1056, 1069, 1111, 1513, 2690
AcoI YGGCCR 1 cut(s) 2288
AcsI RAATTY 6 cut(s) 499, 881, 914, 1567, 2000, 2316
AdeI CACNNNGTG 2 cut(s) 1393, 1658
AfaI GTAC 8 cut(s) 807, 849, 910, 996, 1637, 1807, 1848, 1882
AfiI CCNNNNNNNGG 8 cut(s) 97, 787, 829, 998, 1815, 2110, 2194, 2699
AflII CTTAAG 1 cut(s) 2770
AflIII ACRYGT 5 cut(s) 226, 310, 1387, 2138, 2695
AjiI CACGTC 1 cut(s) 1268
AjnI CCWGG 1 cut(s) 2247
AjuI GAANNNNNNNTTGG 2 cut(s) 2190, 2222
Alw21I GWGCWC 3 cut(s) 1273, 1987, 2229
Alw26I GTCTC 6 cut(s) 605, 1258, 1743, 2063, 2366, 2534
Alw44I GTGCAC 1 cut(s) 1983
AlwI GGATC 6 cut(s) 34, 1056, 1069, 1111, 1513, 2690
AlwNI CAGNNNCTG 2 cut(s) 454, 1561
ApaLI GTGCAC 1 cut(s) 1983
ApeKI GCWGC 5 cut(s) 969, 1518, 2106, 2159, 2656
ApoI RAATTY 6 cut(s) 499, 881, 914, 1567, 2000, 2316
ArsI GACNNNNNNTTYG 2 cut(s) 2285, 2317
AseI ATTAAT 1 cut(s) 1751
Asp700I GAANNNNTTC 3 cut(s) 480, 858, 2031
Asp718I GGTACC 1 cut(s) 1846
AspLEI GCGC 4 cut(s) 709, 1192, 1523, 2795
AspS9I GGNCC 7 cut(s) 617, 773, 815, 1994, 2210, 2413, 2546
AsuC2I CCSGG 1 cut(s) 1788
AsuHPI GGTGA 6 cut(s) 62, 461, 563, 1315, 2176, 2470
AsuNHI GCTAGC 1 cut(s) 934
AvaII GGWCC 4 cut(s) 617, 815, 2210, 2413
AxyI CCTNAGG 1 cut(s) 1842
BaeGI GKGCMC 2 cut(s) 1841, 1987
BamHI GGATCC 1 cut(s) 1061
BanI GGYRCC 3 cut(s) 1162, 1836, 1846
BanII GRGCYC 1 cut(s) 2229
BauI CACGAG 1 cut(s) 1932
BbsI GAAGAC 1 cut(s) 279
Bbv12I GWGCWC 3 cut(s) 1273, 1987, 2229
BbvI GCAGC 5 cut(s) 956, 1505, 2118, 2171, 2643
BceAI ACGGC 1 cut(s) 1136
BciT130I CCWGG 1 cut(s) 2249
BciVI GTATCC 1 cut(s) 2040
BcnI CCSGG 1 cut(s) 1788
BcoDI GTCTC 6 cut(s) 605, 1258, 1743, 2063, 2366, 2534
BfaI CTAG 9 cut(s) 92, 809, 851, 873, 935, 1631, 1913, 2066, 2519
BfmI CTRYAG 2 cut(s) 446, 2176
BfoI RGCGCY 1 cut(s) 1193
BfrI CTTAAG 1 cut(s) 2770
BfuI GTATCC 1 cut(s) 2040
BisI GCNGC 6 cut(s) 515, 970, 1519, 2107, 2160, 2657
BlsI GCNGC 6 cut(s) 516, 971, 1520, 2108, 2161, 2658
BmcAI AGTACT 1 cut(s) 996
Bme1390I CCNGG 2 cut(s) 1788, 2249
Bme18I GGWCC 4 cut(s) 617, 815, 2210, 2413
BmgBI CACGTC 1 cut(s) 1268
BmgT120I GGNCC 7 cut(s) 617, 773, 815, 1994, 2210, 2413, 2546
BmiI GGNNCC 6 cut(s) 1063, 1116, 1164, 1838, 1848, 1995
BmrFI CCNGG 2 cut(s) 1788, 2249
BmrI ACTGGG 2 cut(s) 986, 1269
BmsI GCATC 7 cut(s) 186, 1532, 1636, 2171, 2221, 2411, 2519
BmtI GCTAGC 1 cut(s) 938
BmuI ACTGGG 2 cut(s) 986, 1269
BoxI GACNNNNGTC 1 cut(s) 1764
BpiI GAAGAC 1 cut(s) 279
BplI GAGNNNNNCTC 2 cut(s) 1255, 1287
Bpu10I CCTNAGC 2 cut(s) 57, 2310
BpuEI CTTGAG 7 cut(s) 397, 581, 1250, 1277, 1346, 2282, 2429
BpuMI CCSGG 1 cut(s) 1788
BsaAI YACGTR 1 cut(s) 311
BsaBI GATNNNNATC 1 cut(s) 2498
BsaI GGTCTC 1 cut(s) 2534
BsaJI CCNNGG 5 cut(s) 277, 485, 754, 1118, 2735
BsaWI WCCGGW 2 cut(s) 579, 2146
BsaXI ACNNNNNCTCC 6 cut(s) 978, 1008, 1532, 1562, 1716, 1746
Bsc4I CCNNNNNNNGG 8 cut(s) 97, 787, 829, 998, 1815, 2110, 2194, 2699
Bse118I RCCGGY 1 cut(s) 2543
Bse1I ACTGG 4 cut(s) 684, 992, 1275, 1800
Bse21I CCTNAGG 1 cut(s) 1842
Bse3DI GCAATG 1 cut(s) 1145
Bse8I GATNNNNATC 1 cut(s) 2498
BseBI CCWGG 1 cut(s) 2249
BseDI CCNNGG 5 cut(s) 277, 485, 754, 1118, 2735
BseJI GATNNNNATC 1 cut(s) 2498
BseLI CCNNNNNNNGG 8 cut(s) 97, 787, 829, 998, 1815, 2110, 2194, 2699
BseMI GCAATG 1 cut(s) 1145
BseMII CTCAG 5 cut(s) 71, 781, 1253, 1868, 2301
BseNI ACTGG 4 cut(s) 684, 992, 1275, 1800
BseRI GAGGAG 5 cut(s) 116, 1172, 1247, 1950, 2552
BseSI GKGCMC 2 cut(s) 1841, 1987
BseXI GCAGC 5 cut(s) 956, 1505, 2118, 2171, 2643
BseYI CCCAGC 1 cut(s) 2239
Bsh1236I CGCG 1 cut(s) 1656
BshNI GGYRCC 3 cut(s) 1162, 1836, 1846
BsiHKAI GWGCWC 3 cut(s) 1273, 1987, 2229
BsiSI CCGG 6 cut(s) 350, 580, 1415, 1787, 2147, 2544
BslFI GGGAC 3 cut(s) 576, 974, 2287
BslI CCNNNNNNNGG 8 cut(s) 97, 787, 829, 998, 1815, 2110, 2194, 2699
BsmAI GTCTC 6 cut(s) 605, 1258, 1743, 2063, 2366, 2534
BsmBI CGTCTC 2 cut(s) 1258, 1743
BsmFI GGGAC 3 cut(s) 576, 974, 2287
BsmI GAATGC 2 cut(s) 2234, 2614
Bso31I GGTCTC 1 cut(s) 2534
Bsp1286I GDGCHC 4 cut(s) 1273, 1841, 1987, 2229
Bsp143I GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
BspACI CCGC 7 cut(s) 514, 788, 1323, 1398, 1656, 2104, 2503
BspCNI CTCAG 5 cut(s) 70, 780, 1254, 1869, 2302
BspFNI CGCG 1 cut(s) 1656
BspLI GGNNCC 6 cut(s) 1063, 1116, 1164, 1838, 1848, 1995
BspMAI CTGCAG 1 cut(s) 450
BspOI GCTAGC 1 cut(s) 938
BspPI GGATC 6 cut(s) 34, 1056, 1069, 1111, 1513, 2690
BspT107I GGYRCC 3 cut(s) 1162, 1836, 1846
BspTI CTTAAG 1 cut(s) 2770
BspTNI GGTCTC 1 cut(s) 2534
BsrBI CCGCTC 1 cut(s) 1398
BsrDI GCAATG 1 cut(s) 1145
BsrFI RCCGGY 1 cut(s) 2543
BsrI ACTGG 4 cut(s) 684, 992, 1275, 1800
BssAI RCCGGY 1 cut(s) 2543
BssECI CCNNGG 5 cut(s) 277, 485, 754, 1118, 2735
BssMI GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
BssSI CACGAG 1 cut(s) 1932
BssT1I CCWWGG 4 cut(s) 277, 485, 754, 2735
Bst2BI CACGAG 1 cut(s) 1932
Bst2UI CCWGG 1 cut(s) 2249
Bst6I CTCTTC 4 cut(s) 471, 1926, 2037, 2735
BstAFI CTTAAG 1 cut(s) 2770
BstBAI YACGTR 1 cut(s) 311
BstC8I GCNNGC 2 cut(s) 936, 1331
BstDSI CCRYGG 1 cut(s) 1118
BstFNI CGCG 1 cut(s) 1656
BstH2I RGCGCY 1 cut(s) 1193
BstHHI GCGC 4 cut(s) 709, 1192, 1523, 2795
BstKTI GATC 9 cut(s) 42, 205, 217, 1032, 1064, 1106, 1508, 1630, 2685
BstMAI GTCTC 6 cut(s) 605, 1258, 1743, 2063, 2366, 2534
BstMBI GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
BstMWI GCNNNNNNNGC 5 cut(s) 713, 772, 1612, 2240, 2249
BstNI CCWGG 1 cut(s) 2249
BstNSI RCATGY 5 cut(s) 230, 1333, 2142, 2699, 2732
BstPAI GACNNNNGTC 1 cut(s) 1764
BstSCI CCNGG 2 cut(s) 1786, 2247
BstSFI CTRYAG 2 cut(s) 446, 2176
BstSLI GKGCMC 2 cut(s) 1841, 1987
BstUI CGCG 1 cut(s) 1656
BstV1I GCAGC 5 cut(s) 956, 1505, 2118, 2171, 2643
BstV2I GAAGAC 1 cut(s) 279
BstX2I RGATCY 2 cut(s) 1061, 1505
BstYI RGATCY 2 cut(s) 1061, 1505
Bsu36I CCTNAGG 1 cut(s) 1842
BsuI GTATCC 1 cut(s) 2040
BtgI CCRYGG 1 cut(s) 1118
BtrI CACGTC 1 cut(s) 1268
BtsIMutI CAGTG 2 cut(s) 452, 775
Cac8I GCNNGC 2 cut(s) 936, 1331
CaiI CAGNNNCTG 2 cut(s) 454, 1561
CfoI GCGC 4 cut(s) 709, 1192, 1523, 2795
Cfr10I RCCGGY 1 cut(s) 2543
Cfr13I GGNCC 7 cut(s) 617, 773, 815, 1994, 2210, 2413, 2546
CseI GACGC 1 cut(s) 1547
Csp6I GTAC 8 cut(s) 806, 848, 909, 995, 1636, 1806, 1847, 1881
CspCI CAANNNNNGTGG 2 cut(s) 1107, 1142
CviQI GTAC 8 cut(s) 806, 848, 909, 995, 1636, 1806, 1847, 1881
DpnI GATC 9 cut(s) 41, 204, 216, 1031, 1063, 1105, 1507, 1629, 2684
DpnII GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
DraI TTTAAA 1 cut(s) 645
DraIII CACNNNGTG 2 cut(s) 1393, 1658
DrdI GACNNNNNNGTC 1 cut(s) 1407
DseDI GACNNNNNNGTC 1 cut(s) 1407
EaeI YGGCCR 1 cut(s) 2288
Eam1104I CTCTTC 4 cut(s) 471, 1926, 2037, 2735
EarI CTCTTC 4 cut(s) 471, 1926, 2037, 2735
Ecl136II GAGCTC 1 cut(s) 2227
Eco130I CCWWGG 4 cut(s) 277, 485, 754, 2735
Eco147I AGGCCT 3 cut(s) 858, 1731, 2776
Eco24I GRGCYC 1 cut(s) 2229
Eco31I GGTCTC 1 cut(s) 2534
Eco47I GGWCC 4 cut(s) 617, 815, 2210, 2413
Eco53kI GAGCTC 1 cut(s) 2227
Eco81I CCTNAGG 1 cut(s) 1842
EcoICRI GAGCTC 1 cut(s) 2227
EcoO109I RGGNCCY 1 cut(s) 2413
EcoRII CCWGG 1 cut(s) 2247
EcoT14I CCWWGG 4 cut(s) 277, 485, 754, 2735
EcoT22I ATGCAT 1 cut(s) 2236
EcoT38I GRGCYC 1 cut(s) 2229
ErhI CCWWGG 4 cut(s) 277, 485, 754, 2735
Esp3I CGTCTC 2 cut(s) 1258, 1743
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FaqI GGGAC 3 cut(s) 576, 974, 2287
FauNDI CATATG 1 cut(s) 740
FblI GTMKAC 1 cut(s) 2143
Fnu4HI GCNGC 6 cut(s) 515, 970, 1519, 2107, 2160, 2657
FriOI GRGCYC 1 cut(s) 2229
Fsp4HI GCNGC 6 cut(s) 515, 970, 1519, 2107, 2160, 2657
FspBI CTAG 9 cut(s) 92, 809, 851, 873, 935, 1631, 1913, 2066, 2519
FspI TGCGCA 2 cut(s) 1522, 2794
GlaI GCGC 4 cut(s) 708, 1191, 1522, 2794
GluI GCNGC 6 cut(s) 515, 970, 1519, 2107, 2160, 2657
GsaI CCCAGC 1 cut(s) 2243
HaeII RGCGCY 1 cut(s) 1193
HapII CCGG 6 cut(s) 350, 580, 1415, 1787, 2147, 2544
HgaI GACGC 1 cut(s) 1547
HhaI GCGC 4 cut(s) 709, 1192, 1523, 2795
Hin6I GCGC 4 cut(s) 707, 1190, 1521, 2793
HinP1I GCGC 4 cut(s) 707, 1190, 1521, 2793
HincII GTYRAC 2 cut(s) 1090, 1479
HindII GTYRAC 2 cut(s) 1090, 1479
HindIII AAGCTT 1 cut(s) 434
HpaI GTTAAC 2 cut(s) 1090, 1479
HpaII CCGG 6 cut(s) 350, 580, 1415, 1787, 2147, 2544
HphI GGTGA 6 cut(s) 62, 461, 563, 1315, 2176, 2470
Hpy166II GTNNAC 6 cut(s) 570, 1090, 1479, 1793, 1985, 2144
Hpy188I TCNGA 9 cut(s) 82, 621, 1066, 1563, 1818, 1878, 2079, 2086, 2224
Hpy8I GTNNAC 6 cut(s) 570, 1090, 1479, 1793, 1985, 2144
Hpy99I CGWCG 2 cut(s) 803, 845
HpyCH4IV ACGT 6 cut(s) 156, 310, 1267, 1389, 1610, 1709
HpyF10VI GCNNNNNNNGC 5 cut(s) 713, 772, 1612, 2240, 2249
HpySE526I ACGT 6 cut(s) 156, 310, 1267, 1389, 1610, 1709
HspAI GCGC 4 cut(s) 707, 1190, 1521, 2793
KpnI GGTACC 1 cut(s) 1850
KspAI GTTAAC 2 cut(s) 1090, 1479
Kzo9I GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
LmnI GCTCC 5 cut(s) 282, 1114, 1234, 1276, 2737
Lsp1109I GCAGC 5 cut(s) 956, 1505, 2118, 2171, 2643
LweI GCATC 7 cut(s) 186, 1532, 1636, 2171, 2221, 2411, 2519
MaeI CTAG 9 cut(s) 92, 809, 851, 873, 935, 1631, 1913, 2066, 2519
MaeII ACGT 6 cut(s) 156, 310, 1267, 1389, 1610, 1709
MaeIII GTNAC 8 cut(s) 157, 181, 1253, 1622, 1687, 2166, 2510, 2711
MalI GATC 9 cut(s) 41, 204, 216, 1031, 1063, 1105, 1507, 1629, 2684
MbiI CCGCTC 1 cut(s) 1398
MboI GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
MfeI CAATTG 1 cut(s) 1958
MflI RGATCY 2 cut(s) 1061, 1505
MhlI GDGCHC 4 cut(s) 1273, 1841, 1987, 2229
MlyI GAGTC 3 cut(s) 996, 1360, 1910
MmeI TCCRAC 5 cut(s) 67, 105, 340, 1915, 2680
Mph1103I ATGCAT 1 cut(s) 2236
MroXI GAANNNNTTC 3 cut(s) 480, 858, 2031
MspA1I CMGCKG 2 cut(s) 1606, 1764
MspCI CTTAAG 1 cut(s) 2770
MspI CCGG 6 cut(s) 350, 580, 1415, 1787, 2147, 2544
MspR9I CCNGG 2 cut(s) 1788, 2249
MssI GTTTAAAC 1 cut(s) 645
MunI CAATTG 1 cut(s) 1958
Mva1269I GAATGC 2 cut(s) 2234, 2614
MvaI CCWGG 1 cut(s) 2249
MvnI CGCG 1 cut(s) 1656
MwoI GCNNNNNNNGC 5 cut(s) 713, 772, 1612, 2240, 2249
NciI CCSGG 1 cut(s) 1788
NdeI CATATG 1 cut(s) 740
NdeII GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
NheI GCTAGC 1 cut(s) 934
NlaIV GGNNCC 6 cut(s) 1063, 1116, 1164, 1838, 1848, 1995
NmuCI GTSAC 3 cut(s) 1687, 2166, 2510
NsbI TGCGCA 2 cut(s) 1522, 2794
NsiI ATGCAT 1 cut(s) 2236
NspI RCATGY 5 cut(s) 230, 1333, 2142, 2699, 2732
PaeI GCATGC 1 cut(s) 1333
PceI AGGCCT 3 cut(s) 858, 1731, 2776
PciI ACATGT 3 cut(s) 226, 2138, 2695
PctI GAATGC 2 cut(s) 2234, 2614
PdmI GAANNNNTTC 3 cut(s) 480, 858, 2031
PfeI GAWTC 8 cut(s) 353, 892, 900, 1012, 1441, 2027, 2267, 2563
PflMI CCANNNNNTGG 3 cut(s) 829, 998, 2699
PkrI GCNGC 6 cut(s) 516, 971, 1520, 2108, 2161, 2658
PleI GAGTC 3 cut(s) 995, 1360, 1910
PmeI GTTTAAAC 1 cut(s) 645
PpsI GAGTC 3 cut(s) 995, 1360, 1910
Ppu21I YACGTR 1 cut(s) 311
PpuMI RGGWCCY 1 cut(s) 2413
PscI ACATGT 3 cut(s) 226, 2138, 2695
PshAI GACNNNNGTC 1 cut(s) 1764
PshBI ATTAAT 1 cut(s) 1751
PsiI TTATAA 1 cut(s) 441
Psp124BI GAGCTC 1 cut(s) 2229
Psp5II RGGWCCY 1 cut(s) 2413
Psp6I CCWGG 1 cut(s) 2247
PspFI CCCAGC 1 cut(s) 2239
PspGI CCWGG 1 cut(s) 2247
PspN4I GGNNCC 6 cut(s) 1063, 1116, 1164, 1838, 1848, 1995
PspPI GGNCC 7 cut(s) 617, 773, 815, 1994, 2210, 2413, 2546
PspPPI RGGWCCY 1 cut(s) 2413
PstI CTGCAG 1 cut(s) 450
PstNI CAGNNNCTG 2 cut(s) 454, 1561
PsuI RGATCY 2 cut(s) 1061, 1505
PvuII CAGCTG 2 cut(s) 1606, 1764
RsaI GTAC 8 cut(s) 807, 849, 910, 996, 1637, 1807, 1848, 1882
RsaNI GTAC 8 cut(s) 806, 848, 909, 995, 1636, 1806, 1847, 1881
SacI GAGCTC 1 cut(s) 2229
SatI GCNGC 6 cut(s) 515, 970, 1519, 2107, 2160, 2657
Sau3AI GATC 9 cut(s) 39, 202, 214, 1029, 1061, 1103, 1505, 1627, 2682
Sau96I GGNCC 7 cut(s) 617, 773, 815, 1994, 2210, 2413, 2546
ScaI AGTACT 1 cut(s) 996
SchI GAGTC 3 cut(s) 996, 1360, 1910
ScrFI CCNGG 2 cut(s) 1788, 2249
SduI GDGCHC 4 cut(s) 1273, 1841, 1987, 2229
SfaNI GCATC 7 cut(s) 186, 1532, 1636, 2171, 2221, 2411, 2519
SfcI CTRYAG 2 cut(s) 446, 2176
SinI GGWCC 4 cut(s) 617, 815, 2210, 2413
SmlI CTYRAG 8 cut(s) 376, 596, 1229, 1292, 1361, 2297, 2408, 2770
SmoI CTYRAG 8 cut(s) 376, 596, 1229, 1292, 1361, 2297, 2408, 2770
SphI GCATGC 1 cut(s) 1333
SseBI AGGCCT 3 cut(s) 858, 1731, 2776
SsiI CCGC 7 cut(s) 514, 788, 1323, 1398, 1656, 2104, 2503
SspI AATATT 3 cut(s) 119, 127, 1680
SspMI CTAG 9 cut(s) 92, 809, 851, 873, 935, 1631, 1913, 2066, 2519
SstI GAGCTC 1 cut(s) 2229
StuI AGGCCT 3 cut(s) 858, 1731, 2776
StyD4I CCNGG 2 cut(s) 1786, 2247
StyI CCWWGG 4 cut(s) 277, 485, 754, 2735
TaiI ACGT 6 cut(s) 159, 313, 1270, 1392, 1613, 1712
TaqI TCGA 4 cut(s) 862, 2229, 2620, 2669
TatI WGTACW 5 cut(s) 805, 847, 994, 1635, 1880
TauI GCSGC 1 cut(s) 517
TfiI GAWTC 8 cut(s) 353, 892, 900, 1012, 1441, 2027, 2267, 2563
TscAI CASTG 2 cut(s) 459, 775
TseFI GTSAC 3 cut(s) 1687, 2166, 2510
TseI GCWGC 5 cut(s) 969, 1518, 2106, 2159, 2656
Tsp45I GTSAC 3 cut(s) 1687, 2166, 2510
TspDTI ATGAA 6 cut(s) 422, 554, 884, 892, 1521, 2569
TspGWI ACGGA 3 cut(s) 1706, 1943, 2379
TspRI CASTG 2 cut(s) 459, 775
Van91I CCANNNNNTGG 3 cut(s) 829, 998, 2699
Vha464I CTTAAG 1 cut(s) 2770
VneI GTGCAC 1 cut(s) 1983
VpaK11BI GGWCC 4 cut(s) 617, 815, 2210, 2413
VspI ATTAAT 1 cut(s) 1751
XapI RAATTY 6 cut(s) 499, 881, 914, 1567, 2000, 2316
XbaI TCTAGA 4 cut(s) 1630, 1912, 2065, 2518
XceI RCATGY 5 cut(s) 230, 1333, 2142, 2699, 2732
XmiI GTMKAC 1 cut(s) 2143
XmnI GAANNNNTTC 3 cut(s) 480, 858, 2031
XspI CTAG 9 cut(s) 92, 809, 851, 873, 935, 1631, 1913, 2066, 2519
ZrmI AGTACT 1 cut(s) 996
Zsp2I ATGCAT 1 cut(s) 2236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.