pycom03g04300

disease resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
3377022 .. 3379767
2746 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g04300.1

Sequence Viewer

Length: 1449 bp
ATGGGATACACCACCCTAGTTTTGGGAAGCATTTTGCACACTAAAAAAAGTATTGCAGAATGGTCGTTGTTTAAAGACAATAAAATATGGGACAACTTACCCAAAGGAGAAGATAGAATTATGCCAGTCTTGAAGTTGAGTTTTGACAATTTAGAATCACCATCACTAAAGCAATGTTTTGCATATTGCTCAATGTTCAAAAAAAATTATGAAATTCAAAGAGATAGCTTGATTCAACTTTGGATGGCTCAAGGACTACTCCACCCTTCACCTAGCGAAAGTAAAGATATGGAAGACATAGGCAATGAATATTTTGATATTCTATTGCAAAGCTCCTTATTTCAAGATGCTTCAATGAGTGACAATGGCATTGTTAGCAAATGCAAGATGCATGATCTTGTGCACGATTTGGCAAAACTTATATCCAAATCTGAAATCTTGACAGAAGACTTATGTGGCACTGGTAATGCAGTTGAGATTCCACATGTTGCTCGGGTTTCTACTTTTATACTAGAAAACATTCTAGAAAGAGGTGCTAGGAAATTGCGATCGTTGTATTTTTATGATGGTGAAGTTCCCAGTAACATTCTTCCACGATTCAAAGCTTTACGCGTCTTAAATTTGTGTAATGCTAATATTGAAGAATTTCCAGTTTCAGTTGGAAGGCTAAAACACTTGAGGTATCTTGACATTTCCGAAACAAGATTCAAAACACTCCCCAATTCTATAGGCAAGCTCTATAACCTACAGACGTTAAGAGCAACAAATTGTGCCCTTAAAGAGTTTCCGAAAGAACTGCAAAGCTTGATCAACCTGAGGCATACTTATTTTGATCAGAATACGAAATTTCCACAGGGGATAAGGTGGTTGACTTGCCTTCGAACATTACCTTACTTTTCAGTGGGTAATGAGATTGGTCGTCAAATTGAAGAGTTGGCTGACTTGAAACAATTGAGAGGTGAATTAATTGTTTGTAATCTGGAGCACTTGAAGAATGGAGAAGAAGCAAAGAAAGCTAAGTTGGTTGATAAGACGAAAGTATGCCATTTAAGCTTCCAATGGACAGAAGATAGGTCCATAACCAACAACAATGAGAAGGGGGATGTACTGGAAGGCCTTCGACCGCATTCTGAGTTGGAGAGCTTAAGTATTGAAAATTTCATGGGCGATCAGTTTCCATCGTGGATGATGAGTAGGTCATTACTGCTCAACAACTTGAAGAAGATTCAATTACTTGGATGCGACAAATGTGAAGAAGTCCCACCGCTTGGTCATCTACCTAATCTTACGGAGCTTAAGATTAGCGGAATGGCTAACTTGAAATGTGTTGGAGCTGAGTTCTACGGTTATGATCATGTCCACAATGTAGCCACGACAAGTAAGGAGATAATTACTTTATTTCCTGCACTAAAAGTATTATATATATCTAGCTGTGGTCGATCTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

483

Amino Acids

54.91

Weight (kDa)

6.89

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 65 - 138 1.2e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 181 - 439 1.1e-34 Leucine-rich repeat region
LRR_8 PF13855 202 - 259 5.9e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 309 - 437 1.2e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1268
AccII CGCG 1 cut(s) 612
AciI CCGC 3 cut(s) 1124, 1265, 1305
AcsI RAATTY 5 cut(s) 213, 619, 644, 845, 1156
AfaI GTAC 1 cut(s) 1107
AfiI CCNNNNNNNGG 2 cut(s) 22, 1268
AflII CTTAAG 2 cut(s) 1144, 1295
AflIII ACRYGT 2 cut(s) 484, 610
AjuI GAANNNNNNNTTGG 2 cut(s) 1004, 1036
Alw21I GWGCWC 2 cut(s) 405, 987
Alw44I GTGCAC 1 cut(s) 401
Ama87I CYCGRG 1 cut(s) 492
AoxI GGCC 1 cut(s) 1114
ApaLI GTGCAC 1 cut(s) 401
ApoI RAATTY 5 cut(s) 213, 619, 644, 845, 1156
AseI ATTAAT 1 cut(s) 965
Asp700I GAANNNNTTC 3 cut(s) 519, 645, 1116
AspS9I GGNCC 1 cut(s) 1074
AsuHPI GGTGA 4 cut(s) 150, 261, 581, 971
AsuII TTCGAA 1 cut(s) 880
AvaI CYCGRG 1 cut(s) 492
AvaII GGWCC 1 cut(s) 1074
AxyI CCTNAGG 1 cut(s) 815
BaeGI GKGCMC 2 cut(s) 405, 775
BbsI GAAGAC 2 cut(s) 300, 453
Bbv12I GWGCWC 2 cut(s) 405, 987
BccI CCATC 4 cut(s) 169, 238, 560, 1186
BcgI CGANNNNNNTGC 4 cut(s) 45, 79, 778, 812
BclI TGATCA 3 cut(s) 807, 832, 1351
BfaI CTAG 6 cut(s) 17, 273, 512, 524, 537, 1428
BfmI CTRYAG 2 cut(s) 726, 746
BfrI CTTAAG 2 cut(s) 1144, 1295
Bme18I GGWCC 1 cut(s) 1074
BmeT110I CYCGRG 1 cut(s) 492
BmgT120I GGNCC 1 cut(s) 1074
BmrI ACTGGG 1 cut(s) 573
BmsI GCATC 3 cut(s) 337, 378, 1229
BmuI ACTGGG 1 cut(s) 573
BpiI GAAGAC 2 cut(s) 300, 453
BpmI CTGGAG 1 cut(s) 1001
Bpu14I TTCGAA 1 cut(s) 880
BpuEI CTTGAG 2 cut(s) 234, 697
Bsc4I CCNNNNNNNGG 2 cut(s) 22, 1268
Bse1I ACTGG 5 cut(s) 125, 466, 579, 650, 1113
Bse21I CCTNAGG 1 cut(s) 815
Bse3DI GCAATG 2 cut(s) 179, 310
BseGI GGATG 4 cut(s) 249, 1108, 1191, 1244
BseLI CCNNNNNNNGG 2 cut(s) 22, 1268
BseMI GCAATG 2 cut(s) 179, 310
BseMII CTCAG 3 cut(s) 806, 1122, 1326
BseNI ACTGG 5 cut(s) 125, 466, 579, 650, 1113
BseSI GKGCMC 2 cut(s) 405, 775
BsgI GTGCAG 1 cut(s) 1389
Bsh1236I CGCG 1 cut(s) 612
Bsh1285I CGRYCG 2 cut(s) 551, 1124
BshFI GGCC 1 cut(s) 1116
BsiEI CGRYCG 2 cut(s) 551, 1124
BsiHKAI GWGCWC 2 cut(s) 405, 987
BsiHKCI CYCGRG 1 cut(s) 492
BslFI GGGAC 2 cut(s) 104, 1244
BslI CCNNNNNNNGG 2 cut(s) 22, 1268
BsmFI GGGAC 2 cut(s) 104, 1244
BsmI GAATGC 1 cut(s) 1126
BsnI GGCC 1 cut(s) 1116
BsoBI CYCGRG 1 cut(s) 492
Bsp119I TTCGAA 1 cut(s) 880
Bsp1286I GDGCHC 3 cut(s) 405, 775, 987
Bsp143I GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
BspACI CCGC 3 cut(s) 1124, 1265, 1305
BspANI GGCC 1 cut(s) 1116
BspCNI CTCAG 3 cut(s) 807, 1123, 1327
BspFNI CGCG 1 cut(s) 612
BspT104I TTCGAA 1 cut(s) 880
BspTI CTTAAG 2 cut(s) 1144, 1295
BsrDI GCAATG 2 cut(s) 179, 310
BsrI ACTGG 5 cut(s) 125, 466, 579, 650, 1113
BssMI GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
Bst4CI ACNGT 1 cut(s) 1346
Bst6I CTCTTC 1 cut(s) 924
BstAFI CTTAAG 2 cut(s) 1144, 1295
BstBI TTCGAA 1 cut(s) 880
BstC8I GCNNGC 1 cut(s) 734
BstDEI CTNAG 4 cut(s) 815, 1017, 1131, 1335
BstF5I GGATG 4 cut(s) 249, 1108, 1191, 1244
BstFNI CGCG 1 cut(s) 612
BstKTI GATC 7 cut(s) 397, 551, 810, 835, 1171, 1354, 1442
BstMBI GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
BstMCI CGRYCG 2 cut(s) 551, 1124
BstMWI GCNNNNNNNGC 3 cut(s) 375, 1013, 1050
BstNSI RCATGY 1 cut(s) 488
BstSFI CTRYAG 2 cut(s) 726, 746
BstSLI GKGCMC 2 cut(s) 405, 775
BstUI CGCG 1 cut(s) 612
BstV2I GAAGAC 2 cut(s) 300, 453
Bsu36I CCTNAGG 1 cut(s) 815
BsuRI GGCC 1 cut(s) 1116
BtsCI GGATG 4 cut(s) 249, 1108, 1191, 1244
BtsIMutI CAGTG 2 cut(s) 459, 906
Cac8I GCNNGC 1 cut(s) 734
Cfr13I GGNCC 1 cut(s) 1074
CseI GACGC 1 cut(s) 601
Csp6I GTAC 1 cut(s) 1106
CviAII CATG 4 cut(s) 392, 485, 1162, 1355
CviQI GTAC 1 cut(s) 1106
DdeI CTNAG 4 cut(s) 815, 1017, 1131, 1335
DpnI GATC 7 cut(s) 396, 550, 809, 834, 1170, 1353, 1441
DpnII GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
DraI TTTAAA 1 cut(s) 73
Eam1104I CTCTTC 1 cut(s) 924
EarI CTCTTC 1 cut(s) 924
Eco147I AGGCCT 1 cut(s) 1116
Eco47I GGWCC 1 cut(s) 1074
Eco81I CCTNAGG 1 cut(s) 815
Eco88I CYCGRG 1 cut(s) 492
EcoT22I ATGCAT 1 cut(s) 393
FaeI CATG 4 cut(s) 395, 488, 1165, 1358
FaqI GGGAC 2 cut(s) 104, 1244
FatI CATG 4 cut(s) 391, 484, 1161, 1354
FbaI TGATCA 3 cut(s) 807, 832, 1351
FokI GGATG 4 cut(s) 256, 1115, 1198, 1251
FspBI CTAG 6 cut(s) 17, 273, 512, 524, 537, 1428
GsuI CTGGAG 1 cut(s) 1001
HaeIII GGCC 1 cut(s) 1116
HgaI GACGC 1 cut(s) 601
Hin1II CATG 4 cut(s) 395, 488, 1165, 1358
HincII GTYRAC 1 cut(s) 870
HindII GTYRAC 1 cut(s) 870
HindIII AAGCTT 3 cut(s) 603, 802, 1051
HinfI GANTC 6 cut(s) 155, 232, 478, 597, 705, 1225
HphI GGTGA 4 cut(s) 150, 261, 581, 971
Hpy166II GTNNAC 3 cut(s) 403, 870, 1360
Hpy188I TCNGA 5 cut(s) 433, 697, 789, 837, 1132
Hpy188III TCNNGA 6 cut(s) 130, 344, 439, 524, 686, 980
Hpy8I GTNNAC 3 cut(s) 403, 870, 1360
HpyAV CCTTC 6 cut(s) 276, 657, 887, 1090, 1106, 1127
HpyCH4III ACNGT 1 cut(s) 1346
HpyCH4IV ACGT 1 cut(s) 752
HpyF10VI GCNNNNNNNGC 3 cut(s) 375, 1013, 1050
HpyF3I CTNAG 4 cut(s) 815, 1017, 1131, 1335
HpySE526I ACGT 1 cut(s) 752
Hsp92II CATG 4 cut(s) 395, 488, 1165, 1358
Ksp22I TGATCA 3 cut(s) 807, 832, 1351
Kzo9I GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
LmnI GCTCC 4 cut(s) 338, 982, 1291, 1331
LpnPI CCDG 9 cut(s) 138, 447, 592, 663, 827, 839, 965, 1094, 1416
LweI GCATC 3 cut(s) 337, 378, 1229
MaeI CTAG 6 cut(s) 17, 273, 512, 524, 537, 1428
MaeII ACGT 1 cut(s) 752
MaeIII GTNAC 2 cut(s) 359, 581
MalI GATC 7 cut(s) 396, 550, 809, 834, 1170, 1353, 1441
MboI GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
MfeI CAATTG 1 cut(s) 950
MhlI GDGCHC 3 cut(s) 405, 775, 987
MluI ACGCGT 1 cut(s) 610
MmeI TCCRAC 3 cut(s) 640, 1116, 1309
MnlI CCTC 4 cut(s) 524, 672, 810, 950
Mph1103I ATGCAT 1 cut(s) 393
MroXI GAANNNNTTC 3 cut(s) 519, 645, 1116
MseI TTAA 8 cut(s) 72, 617, 755, 777, 965, 1049, 1145, 1296
MspCI CTTAAG 2 cut(s) 1144, 1295
MunI CAATTG 1 cut(s) 950
Mva1269I GAATGC 1 cut(s) 1126
MvnI CGCG 1 cut(s) 612
MwoI GCNNNNNNNGC 3 cut(s) 375, 1013, 1050
NdeII GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
NlaIII CATG 4 cut(s) 395, 488, 1165, 1358
NmuCI GTSAC 1 cut(s) 359
NsiI ATGCAT 1 cut(s) 393
NspI RCATGY 1 cut(s) 488
NspV TTCGAA 1 cut(s) 880
PceI AGGCCT 1 cut(s) 1116
PciI ACATGT 1 cut(s) 484
PctI GAATGC 1 cut(s) 1126
PdmI GAANNNNTTC 3 cut(s) 519, 645, 1116
PfeI GAWTC 6 cut(s) 155, 232, 478, 597, 705, 1225
PflMI CCANNNNNTGG 1 cut(s) 1268
Ple19I CGATCG 1 cut(s) 551
PscI ACATGT 1 cut(s) 484
PshBI ATTAAT 1 cut(s) 965
PspPI GGNCC 1 cut(s) 1074
PvuI CGATCG 1 cut(s) 551
RsaI GTAC 1 cut(s) 1107
RsaNI GTAC 1 cut(s) 1106
SaqAI TTAA 8 cut(s) 72, 617, 755, 777, 965, 1049, 1145, 1296
Sau3AI GATC 7 cut(s) 394, 548, 807, 832, 1168, 1351, 1439
Sau96I GGNCC 1 cut(s) 1074
SduI GDGCHC 3 cut(s) 405, 775, 987
SfaNI GCATC 3 cut(s) 337, 378, 1229
SfcI CTRYAG 2 cut(s) 726, 746
SfuI TTCGAA 1 cut(s) 880
SinI GGWCC 1 cut(s) 1074
SmlI CTYRAG 4 cut(s) 249, 676, 1144, 1295
SmoI CTYRAG 4 cut(s) 249, 676, 1144, 1295
SseBI AGGCCT 1 cut(s) 1116
SsiI CCGC 3 cut(s) 1124, 1265, 1305
SspI AATATT 2 cut(s) 311, 637
SspMI CTAG 6 cut(s) 17, 273, 512, 524, 537, 1428
StuI AGGCCT 1 cut(s) 1116
TaaI ACNGT 1 cut(s) 1346
TaiI ACGT 1 cut(s) 755
TaqI TCGA 3 cut(s) 880, 1120, 1438
TatI WGTACW 1 cut(s) 1105
TfiI GAWTC 6 cut(s) 155, 232, 478, 597, 705, 1225
Tru1I TTAA 8 cut(s) 72, 617, 755, 777, 965, 1049, 1145, 1296
Tru9I TTAA 8 cut(s) 72, 617, 755, 777, 965, 1049, 1145, 1296
TscAI CASTG 2 cut(s) 466, 906
TseFI GTSAC 1 cut(s) 359
Tsp45I GTSAC 1 cut(s) 359
TspDTI ATGAA 3 cut(s) 225, 321, 1150
TspGWI ACGGA 1 cut(s) 1304
TspRI CASTG 2 cut(s) 466, 906
Van91I CCANNNNNTGG 1 cut(s) 1268
Vha464I CTTAAG 2 cut(s) 1144, 1295
VneI GTGCAC 1 cut(s) 401
VpaK11BI GGWCC 1 cut(s) 1074
VspI ATTAAT 1 cut(s) 965
XapI RAATTY 5 cut(s) 213, 619, 644, 845, 1156
XbaI TCTAGA 1 cut(s) 523
XceI RCATGY 1 cut(s) 488
XcmI CCANNNNNNNNNTGG 1 cut(s) 19
XmnI GAANNNNTTC 3 cut(s) 519, 645, 1116
XspI CTAG 6 cut(s) 17, 273, 512, 524, 537, 1428
Zsp2I ATGCAT 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.