Prupe.1G235500_v2.0.a1

disease resistance

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
24908734 .. 24914129
5396 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G235500.1

Sequence Viewer

Length: 3363 bp
ATGGAAGCTGGAAAGGTGTTAGAAGTTCTCTATACTTTTCCTGTCGAGGGAATACTGAACAAGCTGGCTTCACTTGCTGCTCGAGAAATAAGTCTGTTCCGGGGATTCAAAAAGAAACTAACAAAGCTTCGTCAATCGTTACTCGAGATTCAAGAGTTCTTAGGCGATGTTGCCCACCAGCCACAGCAACGGGGCAAGGCAGTGGAGGACTGGGTGAGGAAACTGAAGGACATAGCTGATGATGCTGACAATGTCTTGGATGAAATCAACTATGAAGATCTCCGCAGGCAAGTAGAACTGCCAAACCAAAAGAGGAAAAAGCTAAGCAAATTCCTTTCAAACTCCTGGTTTCGTCGAAACATGGCACATAAAATCAAGGACATCAAGGACTCTTTGGTATATCTCAAATCTGAGGCATCTTTCATTGGACTAGTTGCCAAGAAAATAGATGCAACCCCTCGAGGGATTGCAGGGGATAGAGAAACCAACTCATTCTTTGATGAAGATGAAATCGTGGTTGGAAGGAAGGAGGATCTGTCAAAGATAATTACAATCTTGACTAACTCCAACTTGGATCAAGAAAATCTTTCAGTAATGCCCATTGTAGGAATGGGAGGCCTAGGGAAGACAACTTTGGCTAAGTCAGTATTCAATGATGATTCTATTGGTAGACATTTTGATAAAAAAATATGGGTATGTGTATCTAACACTTTTCAGGTCAATTCGATTTTAAGTTGGATATTAGAATATCTTAACCCAACAAAGGCTGGGATACAACGCCAAGATGCATTGCTTCAAAACCTAGTAGAAGAATTGAAAGAGAAGAGATATTTTCTCGTGCTTGATGACGTCTGGAACGAAGATCCTCAAAAATGGAGCAAATTGATGACTTGTGTGTCAAAACTTCATAGTGCCCAGGGAAGCGTCGTTATTGTCACTACGCGCAGTGCCAGTGTTGCATCAATCACGAAAAAAGTACTTCCAATGTATGTTTTGGGAGGTCTATCTCTTGATGATTGTTGGGACATATTGAAGAAAAGAGCATTTCCGTATGGTAATGCTCCTACTGCAAAAGATCTAGAAACAATTGGAAAGGATATTGCCATAAAGTGTGCTGGTATACCGTTAACGGCAAAGGTTTTGGGAAGCATGTTGCGTTCTAAATATAGTATCGATGAATGGTTGGAAATTCAAAACAGTAGGATATGGGAATTACCAGAAGGAGATGAAAGAATTATCTCGGTTTTGAAGTTGAGTTTTGATAATTTGAAATCACCTTCTTTGAAACAGTGTTTTGCATATTTGTCAAAGTTCAAGAAAGATTTTGAAATGGAAAGAGAAGACTTGATCCAGCTATGGATGGCTCAAGGATTTCTCTGTTCTTCTCCTAACAAAGATATGGAGGATATAGGTCATGAATATTTTGCAATTCTGTCGCAAAACTCCCTCTTTCAAGAAGTTGAAAGAAGCTATCCCCACTTTGGTATATTTATTAAATGCAAGATGCACGATCTTGTACATGATCTTGCTAAGCTTGTATCAAGATCTGAAATGGAAGATAAACTTGAGAATCAACACGTGGCATGGGATCGTTCTAAAAGTTCTGAAAGAAATGCTGAGAAACGGCGATCACTGTTTGTGAATGGTGATCAAGCCCTTAGTAATAATACATCACTTATAAGCTTTAAGGCTTTGCGTGTTTTAAATTTGTACAGGGCTGATATTGAGGAGCTGCCAAGTTCAATTGGCGTCTTGATACATTTGAGGTATTTGAACGTTTCTCGAACAAAAATCAAAGAACTCCCGAAGTCTATTGGCAAGCTTTATAACCTACAAACGTTAAGAATGGAGGATACATGGAATCTTGAAACGTTTCCAAAGGAAATGGAAAATTTGATCAACTTGAGGCATGTTTATTTCCATCGTCGTGATGAGGCAGTTTCATTTGGGATGGGACGATTGAAACATCTGCAAACAATATCTCCTTTTTTTACTTTGGACAAGGAAAGTAATCGTAGAATTGACGAGCTGGGTGGCTTAAACCAATTAAAAGGTGAACTAATTATTAGTGGTTTGGAACATGTGAGGGACGGAGGCCAAGCAAGGGCATCAAATTTAGTTGGGAAAGCAAATCTACGAAGGTTGACATTAGAATGGGGGGAGTATGACGAGGAAAGAAAAGAGAAAGACAATGATGTACTGGAAGGCCTCCGACTCAACTCTGAGTTAGAATTCTTAAAGATTGACAAATTCATGGGTTCTAAATTAGCATCATGGATGATGAGTGGTTTGTTGCCACTGAATTTGACAGAGATTCGGTTAATGAGATGCATAGAATGCGAACAAGTCCCGTCACTTGGCCATTTACCAAATCTTAGGCTTGTTGAGTTCAGTGAAATGTCAGAGCTTAAATGTGTGGGAGTTGAGTTTTATGGTTATAACCATGTTAACGGTGCGGCGAAGAAGAAAGAGACTTTGTTTCCAGCATTGAAAAGCTTAACTATTTATTATTGCCCAGCTCTAATTAAATGGGAGGAACTGCCACCAACAGATGAGAAAGTAGCGGTGTTTCCCCGCCTTGAGGAGTTGACTATAGAGTCTTGCGACAGTCTCGAGTTCATTCCAATTACCCTGGGCAAGGGGAAGGGAATGCCATGCCTCCGCAAATTGCAGATTGAGGATTGTGAGAAATTATCAAGCTTGCCGACTAGCTTAGAATATTGCATCTCTCTTCAGGAGTTGAGTATCAAGGAATGTGATGGATTGACAAGTCTACCGAGTGGGCTACCATCCTGCACATCTCTTAAGAAGTTGAGAATCGCGTCATGCCACAATTTGATATCTCTGGCACATCTCGATGTATCCAGGTTGCAGTCTCTTTCATCTTTAGAAATATTTTATTGTTTGAAATTAAAATATTTGTCATTGGAGGGGCTACGCTCTCTTACGCGTTTAGAATCTATGAAAATTGGTGCGTTTTCGGAGGAGCTCGATTCTTTCCCTGATTTTGAGCTTCCATCACAAATCCAAACTCTAGAGATCGAAGGGTGGCCTAAGCTCAAGTCTCTACCTCAACAACAAATTCAGCACTGCACTTGTCTACAAGTAGTGTCCATAGTCTCTTTCGACAGCGTGGAGGCTCTTCCAGAGTGGTTGGGTAACCTTACATCTCTTACCACCCTGAGTATCCGTCGGTGTAAAAATCTGGTGTCTCTTCCTGCCGTTGAAGTTATGCAACGCCTCACCAAACTAAAAAAGCTAGTGATTGATACATGTCCCCGTCTAGGGGGAATATCCACCCTCAAGAGCGGCCCAGAATGGCACAAGATTTCTCACATCCCACGTATAGATGTTTCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1121

Amino Acids

127.55

Weight (kDa)

7.69

Isoelectric Point (pI)

45.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1679, 1827, 2439
AasI GACNNNNNNGTC 2 cut(s) 895, 2596
AatII GACGTC 1 cut(s) 852
AbsI CCTCGAGG 1 cut(s) 459
AccBSI CCGCTC 1 cut(s) 3309
AccI GTMKAC 4 cut(s) 670, 1120, 2773, 3100
AccII CGCG 3 cut(s) 943, 2822, 2950
AciI CCGC 6 cut(s) 283, 2456, 2564, 2575, 2662, 3309
AclI AACGTT 3 cut(s) 1776, 1838, 1871
AclWI GGATC 5 cut(s) 540, 582, 857, 1342, 1596
AcoI YGGCCR 1 cut(s) 2359
AcsI RAATTY 9 cut(s) 329, 1188, 1705, 1891, 2113, 2231, 2249, 2302, 3081
AcuI CTGAAG 2 cut(s) 245, 2717
AcvI CACGTG 1 cut(s) 1579
AcyI GRCGYC 2 cut(s) 849, 1749
AfaI GTAC 4 cut(s) 978, 1518, 1712, 2199
AflII CTTAAG 1 cut(s) 2804
AflIII ACRYGT 4 cut(s) 1576, 2080, 2948, 3272
AhlI ACTAGT 1 cut(s) 430
AjnI CCWGG 4 cut(s) 344, 915, 2631, 2864
AjuI GAANNNNNNNTTGG 4 cut(s) 501, 533, 617, 649
Alw21I GWGCWC 1 cut(s) 2991
Alw26I GTCTC 6 cut(s) 2465, 2615, 2880, 3069, 3124, 3216
AlwI GGATC 5 cut(s) 540, 582, 857, 1342, 1596
Ama87I CYCGRG 4 cut(s) 81, 143, 459, 2612
AoxI GGCC 6 cut(s) 616, 2095, 2206, 2359, 3050, 3310
ApeKI GCWGC 2 cut(s) 77, 1732
ApoI RAATTY 9 cut(s) 329, 1188, 1705, 1891, 2113, 2231, 2249, 2302, 3081
Asp700I GAANNNNTTC 1 cut(s) 1872
AspA2I CCTAGG 1 cut(s) 619
AspLEI GCGC 1 cut(s) 945
AspS9I GGNCC 1 cut(s) 3311
AsuC2I CCSGG 1 cut(s) 101
AsuHPI GGTGA 5 cut(s) 226, 1266, 1658, 2066, 3235
AvaI CYCGRG 4 cut(s) 81, 143, 459, 2612
AvrII CCTAGG 1 cut(s) 619
BaeGI GKGCMC 1 cut(s) 916
BalI TGGCCA 1 cut(s) 2361
BanII GRGCYC 1 cut(s) 2991
BauI CACGAG 1 cut(s) 836
BbrPI CACGTG 1 cut(s) 1579
BbsI GAAGAC 2 cut(s) 632, 1347
Bbv12I GWGCWC 1 cut(s) 2991
BbvI GCAGC 2 cut(s) 64, 1719
BccI CCATC 6 cut(s) 1354, 1929, 1945, 2753, 2797, 3025
BceAI ACGGC 3 cut(s) 1146, 1640, 3206
BcgI CGANNNNNNTGC 2 cut(s) 1416, 1450
BciT130I CCWGG 4 cut(s) 346, 917, 2633, 2866
BciVI GTATCC 4 cut(s) 765, 1846, 2872, 3197
BclI TGATCA 2 cut(s) 1648, 1896
BcnI CCSGG 1 cut(s) 101
BcoDI GTCTC 6 cut(s) 2465, 2615, 2880, 3069, 3124, 3216
BcuI ACTAGT 1 cut(s) 430
BfaI CTAG 8 cut(s) 431, 620, 803, 1079, 2709, 3035, 3260, 3284
BfmI CTRYAG 1 cut(s) 2592
BfrI CTTAAG 1 cut(s) 2804
BfuI GTATCC 4 cut(s) 765, 1846, 2872, 3197
BglII AGATCT 3 cut(s) 277, 1075, 1544
BisI GCNGC 4 cut(s) 78, 1733, 2457, 3310
BlnI CCTAGG 1 cut(s) 619
BlpI GCTNAGC 2 cut(s) 323, 1530
BlsI GCNGC 4 cut(s) 79, 1734, 2458, 3311
BmcAI AGTACT 1 cut(s) 978
Bme1390I CCNGG 5 cut(s) 101, 346, 917, 2633, 2866
BmeT110I CYCGRG 4 cut(s) 81, 143, 459, 2612
BmgT120I GGNCC 1 cut(s) 3311
BmrFI CCNGG 5 cut(s) 101, 346, 917, 2633, 2866
BmrI ACTGGG 1 cut(s) 220
BmuI ACTGGG 1 cut(s) 220
BpiI GAAGAC 2 cut(s) 632, 1347
Bpu10I CCTNAGC 1 cut(s) 3054
Bpu1102I GCTNAGC 2 cut(s) 323, 1530
BpuEI CTTGAG 6 cut(s) 1350, 1586, 1924, 2600, 3044, 3287
BpuMI CCSGG 1 cut(s) 101
Bsa29I ATCGAT 1 cut(s) 1173
BsaAI YACGTR 2 cut(s) 1579, 3344
BsaHI GRCGYC 2 cut(s) 849, 1749
BsaJI CCNNGG 6 cut(s) 100, 619, 915, 916, 2631, 2632
BsaXI ACNNNNNCTCC 4 cut(s) 521, 551, 1966, 1996
Bse1I ACTGG 3 cut(s) 215, 951, 2205
Bse3DI GCAATG 1 cut(s) 788
BseBI CCWGG 4 cut(s) 346, 917, 2633, 2866
BseCI ATCGAT 1 cut(s) 1173
BseDI CCNNGG 6 cut(s) 100, 619, 915, 916, 2631, 2632
BseGI GGATG 6 cut(s) 265, 1365, 1956, 2283, 2789, 3336
BseMI GCAATG 1 cut(s) 788
BseMII CTCAG 4 cut(s) 402, 1608, 2214, 3173
BseNI ACTGG 3 cut(s) 215, 951, 2205
BseRI GAGGAG 3 cut(s) 1742, 2597, 2999
BseSI GKGCMC 1 cut(s) 916
BseXI GCAGC 2 cut(s) 64, 1719
BseYI CCCAGC 3 cut(s) 767, 2029, 2515
BsgI GTGCAG 2 cut(s) 2779, 3076
Bsh1236I CGCG 3 cut(s) 943, 2822, 2950
BshFI GGCC 6 cut(s) 618, 2097, 2208, 2361, 3052, 3312
BshVI ATCGAT 1 cut(s) 1173
BsiHKAI GWGCWC 1 cut(s) 2991
BsiHKCI CYCGRG 4 cut(s) 81, 143, 459, 2612
BsiSI CCGG 1 cut(s) 100
BslFI GGGAC 5 cut(s) 1037, 1968, 2102, 2333, 3261
BsmAI GTCTC 6 cut(s) 2465, 2615, 2880, 3069, 3124, 3216
BsmFI GGGAC 5 cut(s) 1037, 1968, 2102, 2333, 3261
BsmI GAATGC 2 cut(s) 2342, 2655
BsnI GGCC 6 cut(s) 618, 2097, 2208, 2361, 3052, 3312
BsoBI CYCGRG 4 cut(s) 81, 143, 459, 2612
Bsp1286I GDGCHC 2 cut(s) 916, 2991
Bsp1407I TGTACA 2 cut(s) 1516, 1710
Bsp1720I GCTNAGC 2 cut(s) 323, 1530
BspACI CCGC 6 cut(s) 283, 2456, 2564, 2575, 2662, 3309
BspANI GGCC 6 cut(s) 618, 2097, 2208, 2361, 3052, 3312
BspCNI CTCAG 4 cut(s) 403, 1609, 2215, 3174
BspDI ATCGAT 1 cut(s) 1173
BspFNI CGCG 3 cut(s) 943, 2822, 2950
BspHI TCATGA 1 cut(s) 1414
BspPI GGATC 5 cut(s) 540, 582, 857, 1342, 1596
BspQI GCTCTTC 1 cut(s) 3147
BspTI CTTAAG 1 cut(s) 2804
BsrBI CCGCTC 1 cut(s) 3309
BsrDI GCAATG 1 cut(s) 788
BsrGI TGTACA 2 cut(s) 1516, 1710
BsrI ACTGG 3 cut(s) 215, 951, 2205
BssECI CCNNGG 6 cut(s) 100, 619, 915, 916, 2631, 2632
BssNAI GTATAC 1 cut(s) 1121
BssNI GRCGYC 2 cut(s) 849, 1749
BssSI CACGAG 1 cut(s) 836
BssT1I CCWWGG 1 cut(s) 619
Bst1107I GTATAC 1 cut(s) 1121
Bst2BI CACGAG 1 cut(s) 836
Bst2UI CCWGG 4 cut(s) 346, 917, 2633, 2866
Bst4CI ACNGT 6 cut(s) 1125, 1199, 1290, 1635, 2453, 2609
Bst6I CTCTTC 4 cut(s) 818, 2736, 3147, 3219
BstACI GRCGYC 2 cut(s) 849, 1749
BstAFI CTTAAG 1 cut(s) 2804
BstAPI GCANNNNNTGC 1 cut(s) 2337
BstAUI TGTACA 2 cut(s) 1516, 1710
BstBAI YACGTR 2 cut(s) 1579, 3344
BstC8I GCNNGC 4 cut(s) 66, 287, 1820, 2702
BstEII GGTNACC 1 cut(s) 3158
BstENI CCTNNNNNAGG 1 cut(s) 2636
BstF5I GGATG 6 cut(s) 265, 1365, 1956, 2283, 2789, 3336
BstFNI CGCG 3 cut(s) 943, 2822, 2950
BstHHI GCGC 1 cut(s) 945
BstMAI GTCTC 6 cut(s) 2465, 2615, 2880, 3069, 3124, 3216
BstMWI GCNNNNNNNGC 5 cut(s) 74, 242, 956, 1067, 2337
BstNI CCWGG 4 cut(s) 346, 917, 2633, 2866
BstNSI RCATGY 4 cut(s) 1153, 1913, 2084, 3276
BstPI GGTNACC 1 cut(s) 3158
BstSCI CCNGG 5 cut(s) 99, 344, 915, 2631, 2864
BstSFI CTRYAG 1 cut(s) 2592
BstSLI GKGCMC 1 cut(s) 916
BstUI CGCG 3 cut(s) 943, 2822, 2950
BstV1I GCAGC 2 cut(s) 64, 1719
BstV2I GAAGAC 2 cut(s) 632, 1347
BstX2I RGATCY 5 cut(s) 277, 532, 862, 1075, 1544
BstYI RGATCY 5 cut(s) 277, 532, 862, 1075, 1544
BstZ17I GTATAC 1 cut(s) 1121
Bsu15I ATCGAT 1 cut(s) 1173
BsuI GTATCC 4 cut(s) 765, 1846, 2872, 3197
BsuRI GGCC 6 cut(s) 618, 2097, 2208, 2361, 3052, 3312
BsuTUI ATCGAT 1 cut(s) 1173
BtgZI GCGATG 1 cut(s) 180
BtsCI GGATG 6 cut(s) 265, 1365, 1956, 2283, 2789, 3336
BtsI GCAGTG 3 cut(s) 207, 952, 3088
BtsIMutI CAGTG 8 cut(s) 207, 952, 958, 1295, 1631, 2297, 2398, 3088
Cac8I GCNNGC 4 cut(s) 66, 287, 1820, 2702
CciI TCATGA 1 cut(s) 1414
CfoI GCGC 1 cut(s) 945
Cfr13I GGNCC 1 cut(s) 3311
ClaI ATCGAT 1 cut(s) 1173
CseI GACGC 3 cut(s) 913, 1738, 2811
Csp6I GTAC 4 cut(s) 977, 1517, 1711, 2198
CspCI CAANNNNNGTGG 2 cut(s) 2286, 2321
CviQI GTAC 4 cut(s) 977, 1517, 1711, 2198
DraI TTTAAA 1 cut(s) 1704
DrdI GACNNNNNNGTC 2 cut(s) 895, 2596
DseDI GACNNNNNNGTC 2 cut(s) 895, 2596
EaeI YGGCCR 1 cut(s) 2359
Eam1104I CTCTTC 4 cut(s) 818, 2736, 3147, 3219
EarI CTCTTC 4 cut(s) 818, 2736, 3147, 3219
Ecl136II GAGCTC 1 cut(s) 2989
Eco130I CCWWGG 1 cut(s) 619
Eco147I AGGCCT 2 cut(s) 618, 2208
Eco24I GRGCYC 1 cut(s) 2991
Eco32I GATATC 1 cut(s) 2841
Eco53kI GAGCTC 1 cut(s) 2989
Eco57I CTGAAG 2 cut(s) 245, 2717
Eco72I CACGTG 1 cut(s) 1579
Eco88I CYCGRG 4 cut(s) 81, 143, 459, 2612
Eco91I GGTNACC 1 cut(s) 3158
EcoICRI GAGCTC 1 cut(s) 2989
EcoNI CCTNNNNNAGG 1 cut(s) 2636
EcoO65I GGTNACC 1 cut(s) 3158
EcoRI GAATTC 1 cut(s) 2231
EcoRII CCWGG 4 cut(s) 344, 915, 2631, 2864
EcoRV GATATC 1 cut(s) 2841
EcoT14I CCWWGG 1 cut(s) 619
EcoT22I ATGCAT 2 cut(s) 790, 2333
EcoT38I GRGCYC 1 cut(s) 2991
ErhI CCWWGG 1 cut(s) 619
FalI AAGNNNNNCTT 4 cut(s) 570, 602, 1548, 1580
FaqI GGGAC 5 cut(s) 1037, 1968, 2102, 2333, 3261
FauI CCCGC 1 cut(s) 2582
FbaI TGATCA 2 cut(s) 1648, 1896
FblI GTMKAC 4 cut(s) 670, 1120, 2773, 3100
Fnu4HI GCNGC 4 cut(s) 78, 1733, 2457, 3310
FokI GGATG 6 cut(s) 272, 1372, 1963, 2290, 2776, 3323
FriOI GRGCYC 1 cut(s) 2991
Fsp4HI GCNGC 4 cut(s) 78, 1733, 2457, 3310
FspBI CTAG 8 cut(s) 431, 620, 803, 1079, 2709, 3035, 3260, 3284
GlaI GCGC 1 cut(s) 944
GluI GCNGC 4 cut(s) 78, 1733, 2457, 3310
GsaI CCCAGC 3 cut(s) 771, 2033, 2519
HaeIII GGCC 6 cut(s) 618, 2097, 2208, 2361, 3052, 3312
HapII CCGG 1 cut(s) 100
HgaI GACGC 3 cut(s) 913, 1738, 2811
HhaI GCGC 1 cut(s) 945
Hin1I GRCGYC 2 cut(s) 849, 1749
Hin6I GCGC 1 cut(s) 943
HinP1I GCGC 1 cut(s) 943
HincII GTYRAC 4 cut(s) 1128, 2145, 2449, 2589
HindII GTYRAC 4 cut(s) 1128, 2145, 2449, 2589
HindIII AAGCTT 6 cut(s) 125, 1532, 1681, 1820, 2494, 2698
HpaI GTTAAC 2 cut(s) 1128, 2449
HpaII CCGG 1 cut(s) 100
HphI GGTGA 5 cut(s) 226, 1266, 1658, 2066, 3235
Hpy166II GTNNAC 9 cut(s) 671, 1121, 1128, 2057, 2145, 2449, 2589, 2774, 3101
Hpy188I TCNGA 7 cut(s) 412, 1549, 1606, 2213, 2224, 2404, 2983
Hpy8I GTNNAC 9 cut(s) 671, 1121, 1128, 2057, 2145, 2449, 2589, 2774, 3101
Hpy99I CGWCG 4 cut(s) 357, 929, 1929, 3195
HpyAV CCTTC 9 cut(s) 220, 516, 520, 1214, 1287, 2133, 2198, 2638, 3038
HpyCH4III ACNGT 6 cut(s) 1125, 1199, 1290, 1635, 2453, 2609
HpyCH4IV ACGT 6 cut(s) 849, 1578, 1776, 1838, 1871, 3343
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 242, 956, 1067, 2337
HpySE526I ACGT 6 cut(s) 849, 1578, 1776, 1838, 1871, 3343
Hsp92I GRCGYC 2 cut(s) 849, 1749
HspAI GCGC 1 cut(s) 943
Ksp22I TGATCA 2 cut(s) 1648, 1896
KspAI GTTAAC 2 cut(s) 1128, 2449
LguI GCTCTTC 1 cut(s) 3147
LmnI GCTCC 4 cut(s) 876, 1066, 1729, 2986
Lsp1109I GCAGC 2 cut(s) 64, 1719
MaeI CTAG 8 cut(s) 431, 620, 803, 1079, 2709, 3035, 3260, 3284
MaeII ACGT 6 cut(s) 849, 1578, 1776, 1838, 1871, 3343
MaeIII GTNAC 4 cut(s) 138, 934, 2352, 3158
MbiI CCGCTC 1 cut(s) 3309
MfeI CAATTG 2 cut(s) 1086, 1743
MflI RGATCY 5 cut(s) 277, 532, 862, 1075, 1544
MhlI GDGCHC 2 cut(s) 916, 2991
MlsI TGGCCA 1 cut(s) 2361
MluI ACGCGT 1 cut(s) 2948
MluNI TGGCCA 1 cut(s) 2361
MlyI GAGTC 3 cut(s) 383, 2208, 2606
MmeI TCCRAC 5 cut(s) 499, 591, 716, 1164, 2236
Mox20I TGGCCA 1 cut(s) 2361
Mph1103I ATGCAT 2 cut(s) 790, 2333
MroXI GAANNNNTTC 1 cut(s) 1872
MscI TGGCCA 1 cut(s) 2361
MslI CAYNNNNRTG 3 cut(s) 1926, 2152, 2856
Msp20I TGGCCA 1 cut(s) 2361
MspCI CTTAAG 1 cut(s) 2804
MspI CCGG 1 cut(s) 100
MspR9I CCNGG 5 cut(s) 101, 346, 917, 2633, 2866
MunI CAATTG 2 cut(s) 1086, 1743
Mva1269I GAATGC 2 cut(s) 2342, 2655
MvaI CCWGG 4 cut(s) 346, 917, 2633, 2866
MvnI CGCG 3 cut(s) 943, 2822, 2950
MwoI GCNNNNNNNGC 5 cut(s) 74, 242, 956, 1067, 2337
NciI CCSGG 1 cut(s) 101
NmuCI GTSAC 2 cut(s) 934, 2352
NsiI ATGCAT 2 cut(s) 790, 2333
NspI RCATGY 4 cut(s) 1153, 1913, 2084, 3276
PaeR7I CTCGAG 4 cut(s) 81, 143, 459, 2612
PagI TCATGA 1 cut(s) 1414
PasI CCCWGGG 2 cut(s) 916, 2632
PceI AGGCCT 2 cut(s) 618, 2208
PciI ACATGT 2 cut(s) 2080, 3272
PciSI GCTCTTC 1 cut(s) 3147
PcsI WCGNNNNNNNCGW 1 cut(s) 855
PctI GAATGC 2 cut(s) 2342, 2655
PdmI GAANNNNTTC 1 cut(s) 1872
PfeI GAWTC 9 cut(s) 105, 148, 659, 1570, 1861, 2314, 2817, 2957, 2993
PflFI GACNNNGTC 1 cut(s) 251
PkrI GCNGC 4 cut(s) 79, 1734, 2458, 3311
PleI GAGTC 3 cut(s) 383, 2208, 2605
PmaCI CACGTG 1 cut(s) 1579
PmlI CACGTG 1 cut(s) 1579
PpsI GAGTC 3 cut(s) 383, 2208, 2605
Ppu21I YACGTR 2 cut(s) 1579, 3344
PscI ACATGT 2 cut(s) 2080, 3272
PsiI TTATAA 3 cut(s) 1679, 1827, 2439
Psp124BI GAGCTC 1 cut(s) 2991
Psp1406I AACGTT 3 cut(s) 1776, 1838, 1871
Psp6I CCWGG 4 cut(s) 344, 915, 2631, 2864
PspCI CACGTG 1 cut(s) 1579
PspEI GGTNACC 1 cut(s) 3158
PspFI CCCAGC 3 cut(s) 767, 2029, 2515
PspGI CCWGG 4 cut(s) 344, 915, 2631, 2864
PspPI GGNCC 1 cut(s) 3311
PspXI VCTCGAGB 1 cut(s) 459
PsuI RGATCY 5 cut(s) 277, 532, 862, 1075, 1544
PsyI GACNNNGTC 1 cut(s) 251
RsaI GTAC 4 cut(s) 978, 1518, 1712, 2199
RsaNI GTAC 4 cut(s) 977, 1517, 1711, 2198
RseI CAYNNNNRTG 3 cut(s) 1926, 2152, 2856
SacI GAGCTC 1 cut(s) 2991
SapI GCTCTTC 1 cut(s) 3147
SatI GCNGC 4 cut(s) 78, 1733, 2457, 3310
Sau96I GGNCC 1 cut(s) 3311
ScaI AGTACT 1 cut(s) 978
SchI GAGTC 3 cut(s) 383, 2208, 2606
ScrFI CCNGG 5 cut(s) 101, 346, 917, 2633, 2866
SduI GDGCHC 2 cut(s) 916, 2991
SfcI CTRYAG 1 cut(s) 2592
Sfr274I CTCGAG 4 cut(s) 81, 143, 459, 2612
SlaI CTCGAG 4 cut(s) 81, 143, 459, 2612
SmiMI CAYNNNNRTG 3 cut(s) 1926, 2152, 2856
SpeI ACTAGT 1 cut(s) 430
SseBI AGGCCT 2 cut(s) 618, 2208
SsiI CCGC 6 cut(s) 283, 2456, 2564, 2575, 2662, 3309
SspI AATATT 4 cut(s) 1421, 2720, 2895, 2918
SspMI CTAG 8 cut(s) 431, 620, 803, 1079, 2709, 3035, 3260, 3284
SstI GAGCTC 1 cut(s) 2991
StuI AGGCCT 2 cut(s) 618, 2208
StyD4I CCNGG 5 cut(s) 99, 344, 915, 2631, 2864
StyI CCWWGG 1 cut(s) 619
TaaI ACNGT 6 cut(s) 1125, 1199, 1290, 1635, 2453, 2609
TaiI ACGT 6 cut(s) 852, 1581, 1779, 1841, 1874, 3346
TatI WGTACW 4 cut(s) 976, 1516, 1710, 2197
TauI GCSGC 2 cut(s) 2459, 3312
TfiI GAWTC 9 cut(s) 105, 148, 659, 1570, 1861, 2314, 2817, 2957, 2993
TscAI CASTG 8 cut(s) 207, 952, 958, 1295, 1638, 2304, 2398, 3095
TseFI GTSAC 2 cut(s) 934, 2352
TseI GCWGC 2 cut(s) 77, 1732
Tsp45I GTSAC 2 cut(s) 934, 2352
TspGWI ACGGA 3 cut(s) 1038, 2106, 3179
TspRI CASTG 8 cut(s) 207, 952, 958, 1295, 1638, 2304, 2398, 3095
Tth111I GACNNNGTC 1 cut(s) 251
Vha464I CTTAAG 1 cut(s) 2804
XagI CCTNNNNNAGG 1 cut(s) 2636
XapI RAATTY 9 cut(s) 329, 1188, 1705, 1891, 2113, 2231, 2249, 2302, 3081
XbaI TCTAGA 2 cut(s) 1078, 3034
XceI RCATGY 4 cut(s) 1153, 1913, 2084, 3276
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XhoI CTCGAG 4 cut(s) 81, 143, 459, 2612
XmaJI CCTAGG 1 cut(s) 619
XmiI GTMKAC 4 cut(s) 670, 1120, 2773, 3100
XmnI GAANNNNTTC 1 cut(s) 1872
XspI CTAG 8 cut(s) 431, 620, 803, 1079, 2709, 3035, 3260, 3284
ZraI GACGTC 1 cut(s) 850
ZrmI AGTACT 1 cut(s) 978
Zsp2I ATGCAT 2 cut(s) 790, 2333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.