Rmu_ssc0000386.1_g000002

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000386.1
Physical Location & Seq
Forward (+)
3688 .. 5689
2002 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000386.1_g000002.1.cds

Sequence Viewer

Length: 1596 bp
atgttcttcaaagattttgatattgaaaaggatgacttgatccaactatggatggctcagggatggcttcacccttgtcctgacaaaagtctagacatggaggagagaggtaatgaatattttaaaatcctattggcgaagtcgttttttcaagatgctagaaaggattatggtggtaatgttaccaaatcgccaacagagggaggaagtagggtggtgtttccttgccttgaggagctgaccttgattcactgtgaccaactgacaagtgctcccagtcattttccatctcttaaaaagttggtgatacgagacatggatagtggaggcatgccaatagcaagtattctaagcaatcaactcaccactctcacttatctcaggttatggaatgtggggggacttacttgtctgccggaagggatgttggaaaataacaagaatcttgcacatttaaacatatcttcatgttcggagttgactcatatatcagaaggatttgagcactgccccgcatctctttctcatttgtctatagggaattgcaataatttgagatatttacctgatgggatactcacatcttctcttaaaacgctgtcgttgtggagttgtgacaatttaaagcacatcccggatgctacaggcgatggtctcacatcccttcaaacattgggagtgatgaggtgccacaaaataacatccattccattttcacaaggcctgccatctctcggtgtatttagtatagaagactgtcccgaattatcaagtctaccgggtgggctggaattctgcacctctattcggaggttgagaataacaaggtgccctaaggtaccatccatttcaatcgaaagtctgagtacatccctccaacagttgtgtgtaagtaatctagactctcttccaatttcacaaggaggcttcacatcactccgtgacttggaaatccgttactgcgaaagtgcacaatttgggccagaatttagtgcctttcttcaaacccttgaatctcttcaaaaattgaagatattgttgtgcgataatctagaaactattccaagttcagacaagctcacatccctccgcagcttggagattcataggttggcagcatcgtcacagtcctgcagcctcacccgtttgaaggaattgacaattggtgatttctgcgagaagctccatgcattcccggcttttcaagctataccacagcttgaatcattatccatctgggggtggcgtaagctcaagtctctccctgaacaaattcaacacttgccttctttaagacatttggaaatatggttctttcagggagtgcaggctattccagaatggttgggaaaccttgcatctcttgaggacctgactattcggttgtgcagtagtctgaagtttctacctcctgtggaagctatgcaacgcctcaccaaattgaaagagataaacatctccgactgtccccgtctagaagaaagatgcacggaggagagcggctcagagtggcctaagattcgtcatattccaataatcaagagtaagacttcttttcatctgttactaaacgaattgttaaattgggccatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

531

Amino Acids

59.54

Weight (kDa)

5.87

Isoelectric Point (pI)

55.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 408
Acc65I GGTACC 1 cut(s) 838
AccB1I GGYRCC 3 cut(s) 687, 828, 838
AccBSI CCGCTC 1 cut(s) 1500
AccI GTMKAC 1 cut(s) 775
AciI CCGC 3 cut(s) 513, 1090, 1500
AclWI GGATC 1 cut(s) 34
AcsI RAATTY 3 cut(s) 791, 986, 1272
AcuI CTGAAG 1 cut(s) 1418
AdeI CACNNNGTG 1 cut(s) 941
AfaI GTAC 2 cut(s) 840, 868
AfiI CCNNNNNNNGG 7 cut(s) 200, 734, 807, 946, 1096, 1150, 1239
AjuI GAANNNNNNNTTGG 2 cut(s) 1146, 1178
AloI GAACNNNNNNTCC 2 cut(s) 1295, 1327
AluBI AGCT 8 cut(s) 238, 1078, 1095, 1183, 1208, 1219, 1252, 1421
AluI AGCT 8 cut(s) 238, 1078, 1095, 1183, 1208, 1219, 1252, 1421
Alw21I GWGCWC 3 cut(s) 274, 507, 973
Alw26I GTCTC 3 cut(s) 306, 659, 1263
Alw44I GTGCAC 1 cut(s) 969
AlwI GGATC 1 cut(s) 34
AoxI GGCC 4 cut(s) 721, 980, 1511, 1587
ApaLI GTGCAC 1 cut(s) 969
ApeKI GCWGC 3 cut(s) 1092, 1115, 1134
ApoI RAATTY 3 cut(s) 791, 986, 1272
Asp700I GAANNNNTTC 3 cut(s) 1017, 1059, 1272
Asp718I GGTACC 1 cut(s) 838
AspS9I GGNCC 3 cut(s) 980, 1369, 1587
AsuC2I CCSGG 3 cut(s) 635, 780, 1196
AsuHPI GGTGA 6 cut(s) 62, 316, 355, 1132, 1178, 1426
AvaII GGWCC 1 cut(s) 1369
AxyI CCTNAGG 1 cut(s) 834
BaeGI GKGCMC 2 cut(s) 833, 973
BanI GGYRCC 3 cut(s) 687, 828, 838
BbsI GAAGAC 1 cut(s) 759
Bbv12I GWGCWC 3 cut(s) 274, 507, 973
BbvI GCAGC 3 cut(s) 1104, 1127, 1146
BccI CCATC 8 cut(s) 46, 57, 295, 563, 644, 736, 850, 1241
BciVI GTATCC 1 cut(s) 567
BcnI CCSGG 3 cut(s) 635, 780, 1196
BcoDI GTCTC 3 cut(s) 306, 659, 1263
BfaI CTAG 5 cut(s) 92, 159, 899, 1052, 1475
BfmI CTRYAG 3 cut(s) 534, 642, 1132
BfuI GTATCC 1 cut(s) 567
BisI GCNGC 4 cut(s) 1093, 1116, 1135, 1501
BlsI GCNGC 4 cut(s) 1094, 1117, 1136, 1502
Bme1390I CCNGG 3 cut(s) 635, 780, 1196
Bme18I GGWCC 1 cut(s) 1369
BmgT120I GGNCC 3 cut(s) 980, 1369, 1587
BmiI GGNNCC 3 cut(s) 689, 830, 840
BmrFI CCNGG 3 cut(s) 635, 780, 1196
BmrI ACTGGG 1 cut(s) 270
BmsI GCATC 6 cut(s) 145, 524, 628, 1127, 1367, 1475
BmuI ACTGGG 1 cut(s) 270
BoxI GACNNNNGTC 1 cut(s) 87
BpiI GAAGAC 1 cut(s) 759
BplI GAGNNNNNCTC 2 cut(s) 1487, 1519
Bpu10I CCTNAGC 1 cut(s) 57
BpuEI CTTGAG 3 cut(s) 251, 1238, 1385
BpuMI CCSGG 3 cut(s) 635, 780, 1196
BsaBI GATNNNNATC 1 cut(s) 1454
BsaI GGTCTC 1 cut(s) 659
BsaXI ACNNNNNCTCC 2 cut(s) 256, 286
Bsc4I CCNNNNNNNGG 7 cut(s) 200, 734, 807, 946, 1096, 1150, 1239
Bse1I ACTGG 1 cut(s) 276
Bse21I CCTNAGG 1 cut(s) 834
Bse8I GATNNNNATC 1 cut(s) 1454
BseJI GATNNNNATC 1 cut(s) 1454
BseLI CCNNNNNNNGG 7 cut(s) 200, 734, 807, 946, 1096, 1150, 1239
BseMII CTCAG 4 cut(s) 71, 394, 854, 1518
BseNI ACTGG 1 cut(s) 276
BseRI GAGGAG 3 cut(s) 116, 248, 1508
BseSI GKGCMC 2 cut(s) 833, 973
BseXI GCAGC 3 cut(s) 1104, 1127, 1146
BsgI GTGCAG 3 cut(s) 781, 1346, 1408
BshFI GGCC 4 cut(s) 723, 982, 1513, 1589
BshNI GGYRCC 3 cut(s) 687, 828, 838
BsiHKAI GWGCWC 3 cut(s) 274, 507, 973
BsiSI CCGG 4 cut(s) 416, 635, 779, 1196
BslFI GGGAC 3 cut(s) 414, 744, 1452
BslI CCNNNNNNNGG 7 cut(s) 200, 734, 807, 946, 1096, 1150, 1239
BsmAI GTCTC 3 cut(s) 306, 659, 1263
BsmFI GGGAC 3 cut(s) 414, 744, 1452
BsmI GAATGC 1 cut(s) 1190
BsnI GGCC 4 cut(s) 723, 982, 1513, 1589
Bso31I GGTCTC 1 cut(s) 659
Bsp1286I GDGCHC 4 cut(s) 274, 507, 833, 973
Bsp143I GATC 1 cut(s) 39
BspACI CCGC 3 cut(s) 513, 1090, 1500
BspANI GGCC 4 cut(s) 723, 982, 1513, 1589
BspCNI CTCAG 4 cut(s) 70, 393, 855, 1517
BspLI GGNNCC 3 cut(s) 689, 830, 840
BspMAI CTGCAG 1 cut(s) 1136
BspPI GGATC 1 cut(s) 34
BspT107I GGYRCC 3 cut(s) 687, 828, 838
BspTNI GGTCTC 1 cut(s) 659
BsrBI CCGCTC 1 cut(s) 1500
BsrI ACTGG 1 cut(s) 276
BssMI GATC 1 cut(s) 39
Bst4CI ACNGT 5 cut(s) 254, 758, 882, 1128, 1466
Bst6I CTCTTC 2 cut(s) 912, 1023
BstC8I GCNNGC 3 cut(s) 332, 725, 1329
BstDEI CTNAG 7 cut(s) 57, 350, 380, 834, 863, 1504, 1515
BstKTI GATC 1 cut(s) 42
BstMAI GTCTC 3 cut(s) 306, 659, 1263
BstMBI GATC 1 cut(s) 39
BstMWI GCNNNNNNNGC 2 cut(s) 1196, 1205
BstNSI RCATGY 1 cut(s) 334
BstPAI GACNNNNGTC 1 cut(s) 87
BstSCI CCNGG 3 cut(s) 633, 778, 1194
BstSFI CTRYAG 3 cut(s) 534, 642, 1132
BstSLI GKGCMC 2 cut(s) 833, 973
BstV1I GCAGC 3 cut(s) 1104, 1127, 1146
BstV2I GAAGAC 1 cut(s) 759
Bsu36I CCTNAGG 1 cut(s) 834
BsuI GTATCC 1 cut(s) 567
BsuRI GGCC 4 cut(s) 723, 982, 1513, 1589
BtgZI GCGATG 1 cut(s) 663
BtsI GCAGTG 1 cut(s) 505
BtsIMutI CAGTG 2 cut(s) 250, 505
Cac8I GCNNGC 3 cut(s) 332, 725, 1329
Cfr13I GGNCC 3 cut(s) 980, 1369, 1587
Csp6I GTAC 2 cut(s) 839, 867
CviAII CATG 5 cut(s) 97, 316, 331, 468, 1187
CviQI GTAC 2 cut(s) 839, 867
DdeI CTNAG 7 cut(s) 57, 350, 380, 834, 863, 1504, 1515
DpnI GATC 1 cut(s) 41
DpnII GATC 1 cut(s) 39
DraI TTTAAA 3 cut(s) 124, 456, 624
DraIII CACNNNGTG 1 cut(s) 941
DrdI GACNNNNNNGTC 1 cut(s) 408
DseDI GACNNNNNNGTC 1 cut(s) 408
Eam1104I CTCTTC 2 cut(s) 912, 1023
EarI CTCTTC 2 cut(s) 912, 1023
Eco147I AGGCCT 1 cut(s) 723
Eco31I GGTCTC 1 cut(s) 659
Eco47I GGWCC 1 cut(s) 1369
Eco57I CTGAAG 1 cut(s) 1418
Eco81I CCTNAGG 1 cut(s) 834
EcoO109I RGGNCCY 1 cut(s) 1369
EcoRI GAATTC 1 cut(s) 791
EcoT22I ATGCAT 1 cut(s) 1192
FaeI CATG 5 cut(s) 100, 319, 334, 471, 1190
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FaqI GGGAC 3 cut(s) 414, 744, 1452
FatI CATG 5 cut(s) 96, 315, 330, 467, 1186
FauI CCCGC 1 cut(s) 520
FblI GTMKAC 1 cut(s) 775
Fnu4HI GCNGC 4 cut(s) 1093, 1116, 1135, 1501
Fsp4HI GCNGC 4 cut(s) 1093, 1116, 1135, 1501
FspBI CTAG 5 cut(s) 92, 159, 899, 1052, 1475
GluI GCNGC 4 cut(s) 1093, 1116, 1135, 1501
HaeIII GGCC 4 cut(s) 723, 982, 1513, 1589
HapII CCGG 4 cut(s) 416, 635, 779, 1196
Hin1II CATG 5 cut(s) 100, 319, 334, 471, 1190
HincII GTYRAC 1 cut(s) 480
HindII GTYRAC 1 cut(s) 480
HinfI GANTC 8 cut(s) 247, 442, 481, 902, 1013, 1102, 1223, 1519
HpaII CCGG 4 cut(s) 416, 635, 779, 1196
HphI GGTGA 6 cut(s) 62, 316, 355, 1132, 1178, 1426
Hpy166II GTNNAC 3 cut(s) 480, 776, 971
Hpy188I TCNGA 8 cut(s) 475, 493, 810, 864, 1072, 1398, 1462, 1507
Hpy8I GTNNAC 3 cut(s) 480, 776, 971
HpyAV CCTTC 5 cut(s) 413, 488, 674, 1144, 1296
HpyCH4III ACNGT 5 cut(s) 254, 758, 882, 1128, 1466
HpyF10VI GCNNNNNNNGC 2 cut(s) 1196, 1205
HpyF3I CTNAG 7 cut(s) 57, 350, 380, 834, 863, 1504, 1515
Hsp92II CATG 5 cut(s) 100, 319, 334, 471, 1190
KpnI GGTACC 1 cut(s) 842
Kzo9I GATC 1 cut(s) 39
LmnI GCTCC 3 cut(s) 235, 277, 1188
Lsp1109I GCAGC 3 cut(s) 1104, 1127, 1146
LweI GCATC 6 cut(s) 145, 524, 628, 1127, 1367, 1475
MaeI CTAG 5 cut(s) 92, 159, 899, 1052, 1475
MaeIII GTNAC 7 cut(s) 181, 254, 614, 941, 956, 1122, 1563
MalI GATC 1 cut(s) 41
MbiI CCGCTC 1 cut(s) 1500
MboI GATC 1 cut(s) 39
MboII GAAGA 8 cut(s) 456, 576, 764, 899, 992, 1010, 1042, 1490
MfeI CAATTG 1 cut(s) 1161
MhlI GDGCHC 4 cut(s) 274, 507, 833, 973
MlyI GAGTC 2 cut(s) 475, 896
MmeI TCCRAC 4 cut(s) 67, 408, 901, 1485
Mph1103I ATGCAT 1 cut(s) 1192
MroXI GAANNNNTTC 3 cut(s) 1017, 1059, 1272
MseI TTAA 7 cut(s) 123, 294, 455, 591, 623, 1292, 1580
MspI CCGG 4 cut(s) 416, 635, 779, 1196
MspR9I CCNGG 3 cut(s) 635, 780, 1196
MunI CAATTG 1 cut(s) 1161
Mva1269I GAATGC 1 cut(s) 1190
MwoI GCNNNNNNNGC 2 cut(s) 1196, 1205
NciI CCSGG 3 cut(s) 635, 780, 1196
NdeII GATC 1 cut(s) 39
NlaIII CATG 5 cut(s) 100, 319, 334, 471, 1190
NlaIV GGNNCC 3 cut(s) 689, 830, 840
NmuCI GTSAC 4 cut(s) 254, 614, 941, 1122
NsiI ATGCAT 1 cut(s) 1192
NspI RCATGY 1 cut(s) 334
PaeI GCATGC 1 cut(s) 334
PceI AGGCCT 1 cut(s) 723
PctI GAATGC 1 cut(s) 1190
PdmI GAANNNNTTC 3 cut(s) 1017, 1059, 1272
PfeI GAWTC 6 cut(s) 247, 442, 1013, 1102, 1223, 1519
PfoI TCCNGGA 1 cut(s) 633
PkrI GCNGC 4 cut(s) 1094, 1117, 1136, 1502
PleI GAGTC 2 cut(s) 475, 896
PpsI GAGTC 2 cut(s) 475, 896
PpuMI RGGWCCY 1 cut(s) 1369
PshAI GACNNNNGTC 1 cut(s) 87
Psp5II RGGWCCY 1 cut(s) 1369
PspN4I GGNNCC 3 cut(s) 689, 830, 840
PspPI GGNCC 3 cut(s) 980, 1369, 1587
PspPPI RGGWCCY 1 cut(s) 1369
PstI CTGCAG 1 cut(s) 1136
RsaI GTAC 2 cut(s) 840, 868
RsaNI GTAC 2 cut(s) 839, 867
SaqAI TTAA 7 cut(s) 123, 294, 455, 591, 623, 1292, 1580
SatI GCNGC 4 cut(s) 1093, 1116, 1135, 1501
Sau3AI GATC 1 cut(s) 39
Sau96I GGNCC 3 cut(s) 980, 1369, 1587
SchI GAGTC 2 cut(s) 475, 896
ScrFI CCNGG 3 cut(s) 635, 780, 1196
SduI GDGCHC 4 cut(s) 274, 507, 833, 973
SfaNI GCATC 6 cut(s) 145, 524, 628, 1127, 1367, 1475
SfcI CTRYAG 3 cut(s) 534, 642, 1132
SinI GGWCC 1 cut(s) 1369
SmlI CTYRAG 3 cut(s) 230, 1253, 1364
SmoI CTYRAG 3 cut(s) 230, 1253, 1364
SphI GCATGC 1 cut(s) 334
SseBI AGGCCT 1 cut(s) 723
SsiI CCGC 3 cut(s) 513, 1090, 1500
SspI AATATT 1 cut(s) 119
SspMI CTAG 5 cut(s) 92, 159, 899, 1052, 1475
StuI AGGCCT 1 cut(s) 723
StyD4I CCNGG 3 cut(s) 633, 778, 1194
TaaI ACNGT 5 cut(s) 254, 758, 882, 1128, 1466
TaqI TCGA 1 cut(s) 855
TatI WGTACW 1 cut(s) 866
TauI GCSGC 1 cut(s) 1503
TfiI GAWTC 6 cut(s) 247, 442, 1013, 1102, 1223, 1519
Tru1I TTAA 7 cut(s) 123, 294, 455, 591, 623, 1292, 1580
Tru9I TTAA 7 cut(s) 123, 294, 455, 591, 623, 1292, 1580
TscAI CASTG 2 cut(s) 257, 512
TseFI GTSAC 4 cut(s) 254, 614, 941, 1122
TseI GCWGC 3 cut(s) 1092, 1115, 1134
Tsp45I GTSAC 4 cut(s) 254, 614, 941, 1122
TspDTI ATGAA 4 cut(s) 129, 456, 1094, 1547
TspGWI ACGGA 3 cut(s) 929, 944, 1505
TspRI CASTG 2 cut(s) 257, 512
VneI GTGCAC 1 cut(s) 969
VpaK11BI GGWCC 1 cut(s) 1369
XapI RAATTY 3 cut(s) 791, 986, 1272
XbaI TCTAGA 4 cut(s) 91, 898, 1051, 1474
XceI RCATGY 1 cut(s) 334
XmiI GTMKAC 1 cut(s) 775
XmnI GAANNNNTTC 3 cut(s) 1017, 1059, 1272
XspI CTAG 5 cut(s) 92, 159, 899, 1052, 1475
Zsp2I ATGCAT 1 cut(s) 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.