Rw0G005050

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00196
Physical Location & Seq
Reverse (-)
27733 .. 30634
2902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G005050.1

Sequence Viewer

Length: 2310 bp
ATGCAGGAAACTGATTATCTCAAAGAGGTTCCAAGGGAAATGCAAAACTTGATCAACTTGAGGCATCTTTATTTTGATAAGACAAGGGAATTTCCAGCCGGAATATTGCGGGGATTAACTAATCTCCGAACATTGTCTTACTTTAATGTGGGTAAGGAGATGGGTGTTGGAATTGAGGAATTGGTTGGCTTGAACCACTTGAAAGGTGAATTAATCATTCGTAATCTGGAAAATATAAGGGATGAAGAAGAAGCGAAGAAGGCAAAATTAGAGGACAAGAAAAATGTACTGGAGCTAAGTTATGTCTGGGCAAGAAGCAGAAGCAATCCAGAAGGTTTGGAGATTAGGCCGAGCAGCAACATTAATGACGAGAATGTACTAGAAGGACTCAAACCACATACCAAGTTGGAGAGCTTGAGGATTGAAAACTTCATGGGTGATAAATTTCCTTCATGGATGATGAGAAACCCTTTGCCTCTCAACAATTTGAAGAAGGTCCTCCTTTTTGGCTGTCGCAGATGCGAAGGGCTCCCAATACTAGGCCATCTACCGGGTCTTGGACATGTCGAGATTTCTGGAATGCATAACCTAAAACGCTTGGGAAGTGAATTTTATGGTTATAATCATGTTTACGAGGCTGCTGTGGCTACACGAGAGAGGGTCTTATTTCCAGCACTGAAAACGTTAAGCATTATAGGGTGCGATGAGCTAACTGAATGGATGGAAGCACTCACAACGATGACATCGTCAACAAGTAAAGTAGTGGTGTTCCCTTGCCTGGAGAAGTTGACTCTCTCGGGTTGTCCCTTATTGAGAGATGCTCCAAGTCATTTCCCATCTCTCAAGGAGTTGTCGATATGGGACATGGACAGCGAGAAGCCGATGGCAAGTATATGCAATGAAGTGAGCACTCTGACTTCTCTCGATATAAGTAACATCAAGGGGCTTACTTCGCTGTCCTCGGAGATGTTGAAGACGAACAAGAATCTCACATCTTTGGAGATCTGGAGTTGTGATGAGATGATTCGTATTGCTCCAAATGTATTTGGCTGCTGCGCAAATCTTAGGGAGCTGAGCATTCAGTATTGTAAGAAACTGGAGCAGCTAGCCGAGGGTCTAGACACGCTCCCTCTTCTCGAGAAGTTGACCATAAGAGGATGTCCTGCTCTGGAGTTCATTCCGATTGACCACGACATGGCAACCCTCCGCGAATTGGAGATAGAAGATTGTGATGGATTATCTAGAATTGGCCTACTCGATCACTGCACCACTCTACAGGAATTGAAGATATGGCGATGTGGAAATCTAACATCGATTCCAATCTCACAAGGCCTTGCATCTCTCCGCAAATTGGATATTTACAGCTGTGGTGGGTTAACGGGCCTACCGTGCGGGATTGAAAACTGCACCTCTCTTCAGGAATTAATGATATCCGGTTTCTCAAGTCTAGAGACCATTTCGTTTACACGTGTCCTCCCATCTCTCCTCAAATTGCAAGTTTACCGCTGCGATGAATTGTCTTGCTTGTCTGTCCTCGAATACTGTCCCTCGCTTCAGGAATTGAGTGTAAGCAAATGCCCCAAGCTAGCATCCATTTCATTTTCTGCGGATTTGAATCCATGTCTTAAGGAGTTGCGTATACAGCATTGCAATGGTGTACAATCCCTTCCAGATTTCCGCAGTTTCACATCCCTCCTTGTATTGGTGATTGAAGACTGTACGAGTCTGGTATGTGGGTTTCATATCCCGGTGTCTCTGGAGGAGTTGCGGATTTCTCAATGCCATAACCTAGAGAGTATTCCAAGTTTAGAGGAATGCACATCCCTCCGTCAGTTACAGGTTTGGGATTGTGAGAAATTGAAGTCTCTCTCAACAGGGCTGCGCTGCCTCGCTCGTCTCGAGCAATTGGATTTAGGTCCTTTTTGGGAGGAGCTCGACTCCTTCCCTGATTTTCAAGCTCCATCACAACAACTTGACGGATTAGCGTTGCGCGGGTGGCCTAAATTCAAGTCTCTTCCTCAACAAGTTCAACACTTCACTTCGCTGACACATTTGACTATAACATCTTTAAATGGAGTGGACGCTTTACCAGAGTGGTTGGGCAACCTTGCATCTCTCAAGCAACTGACTATTTCGAATTGTGAGAATCTCAAGTATCTACCTTCACTCAAAGCAATGCAACGCCTCACCAAATTACAGAGTCTAGAGATTTGTATGTGTCCACTTCTAAAGGAAAGATGCAGGGAGGACAGCGGCGAAGAATGGCCCAAGATTTCTCACATTCCATATATCAATCTTTATGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

769

Amino Acids

86.72

Weight (kDa)

5.4

Isoelectric Point (pI)

48.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 6 - 201 6.4e-11 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 58 - 194 1.9e-33 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 310 - 457 6.2e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 541 - 688 3e-08 Leucine-rich repeat region
LRR_14 PF23598 668 - 757 5.8e-07 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 676 - 733 9.9e-08 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 621
Acc16I TGCGCA 1 cut(s) 1057
AccB7I CCANNNNNTGG 1 cut(s) 1195
AccI GTMKAC 1 cut(s) 1639
AccII CGCG 2 cut(s) 1209, 1992
AclI AACGTT 1 cut(s) 683
AcsI RAATTY 4 cut(s) 89, 443, 608, 2003
AcuI CTGAAG 2 cut(s) 1400, 1538
AcvI CACGTG 1 cut(s) 1469
AfaI GTAC 4 cut(s) 288, 378, 1659, 1720
AfiI CCNNNNNNNGG 8 cut(s) 539, 550, 557, 778, 1195, 1213, 1351, 1702
AflII CTTAAG 1 cut(s) 1625
AflIII ACRYGT 3 cut(s) 562, 1466, 1468
AjnI CCWGG 1 cut(s) 777
AluBI AGCT 9 cut(s) 295, 414, 709, 1072, 1105, 1365, 1585, 1933, 1958
AluI AGCT 9 cut(s) 295, 414, 709, 1072, 1105, 1365, 1585, 1933, 1958
Alw21I GWGCWC 2 cut(s) 911, 1935
Alw26I GTCTC 5 cut(s) 1445, 1758, 1869, 1901, 2016
Ama87I CYCGRG 3 cut(s) 796, 1136, 1898
AoxI GGCC 7 cut(s) 347, 541, 1249, 1330, 1381, 1997, 2264
ApeKI GCWGC 8 cut(s) 354, 638, 1050, 1053, 1102, 1506, 1879, 1884
ApoI RAATTY 4 cut(s) 89, 443, 608, 2003
AseI ATTAAT 3 cut(s) 212, 363, 1424
AspLEI GCGC 3 cut(s) 1058, 1884, 1992
AspS9I GGNCC 4 cut(s) 496, 1381, 1916, 2265
AsuC2I CCSGG 2 cut(s) 552, 1748
AsuHPI GGTGA 4 cut(s) 218, 449, 1717, 2179
AsuII TTCGAA 1 cut(s) 2135
AsuNHI GCTAGC 2 cut(s) 1105, 1585
AvaI CYCGRG 3 cut(s) 796, 1136, 1898
AvaII GGWCC 2 cut(s) 496, 1916
BanII GRGCYC 2 cut(s) 531, 1935
BarI GAAGNNNNNNTAC 2 cut(s) 1650, 1682
BauI CACGAG 1 cut(s) 651
BbrPI CACGTG 1 cut(s) 1469
BbsI GAAGAC 2 cut(s) 980, 1719
Bbv12I GWGCWC 2 cut(s) 911, 1935
BbvI GCAGC 8 cut(s) 366, 625, 1037, 1040, 1114, 1493, 1866, 1871
BccI CCATC 8 cut(s) 154, 552, 715, 844, 877, 1226, 1486, 1969
BciT130I CCWGG 1 cut(s) 779
BclI TGATCA 1 cut(s) 51
BcnI CCSGG 2 cut(s) 552, 1748
BcoDI GTCTC 5 cut(s) 1445, 1758, 1869, 1901, 2016
BfaI CTAG 9 cut(s) 380, 539, 1106, 1118, 1242, 1448, 1586, 1790, 2204
BfmI CTRYAG 1 cut(s) 1274
BfrI CTTAAG 1 cut(s) 1625
BglII AGATCT 1 cut(s) 1002
BisI GCNGC 9 cut(s) 355, 639, 1051, 1054, 1103, 1507, 1880, 1885, 2254
BlpI GCTNAGC 1 cut(s) 1073
BlsI GCNGC 9 cut(s) 356, 640, 1052, 1055, 1104, 1508, 1881, 1886, 2255
Bme1390I CCNGG 3 cut(s) 552, 779, 1748
Bme18I GGWCC 2 cut(s) 496, 1916
BmeT110I CYCGRG 3 cut(s) 796, 1136, 1898
BmgT120I GGNCC 4 cut(s) 496, 1381, 1916, 2265
BmiI GGNNCC 2 cut(s) 30, 530
BmrFI CCNGG 3 cut(s) 552, 779, 1748
BmsI GCATC 7 cut(s) 73, 509, 808, 1346, 1598, 2120, 2228
BmtI GCTAGC 2 cut(s) 1109, 1589
BpiI GAAGAC 2 cut(s) 980, 1719
BplI GAGNNNNNCTC 4 cut(s) 805, 837, 1922, 1954
BpmI CTGGAG 6 cut(s) 311, 800, 1027, 1118, 1190, 1778
Bpu1102I GCTNAGC 1 cut(s) 1073
Bpu14I TTCGAA 1 cut(s) 2135
BpuEI CTTGAG 6 cut(s) 79, 436, 827, 1426, 2102, 2135
BpuMI CCSGG 2 cut(s) 552, 1748
Bsa29I ATCGAT 1 cut(s) 1313
BsaAI YACGTR 1 cut(s) 1469
BsaBI GATNNNNATC 2 cut(s) 1319, 1614
BsaI GGTCTC 1 cut(s) 1445
BsaJI CCNNGG 3 cut(s) 32, 960, 1110
BsaWI WCCGGW 1 cut(s) 1433
BsaXI ACNNNNNCTCC 2 cut(s) 1458, 1488
Bsc4I CCNNNNNNNGG 8 cut(s) 539, 550, 557, 778, 1195, 1213, 1351, 1702
Bse1I ACTGG 2 cut(s) 294, 1101
Bse3DI GCAATG 4 cut(s) 904, 1645, 1657, 2181
Bse8I GATNNNNATC 2 cut(s) 1319, 1614
BseBI CCWGG 1 cut(s) 779
BseCI ATCGAT 1 cut(s) 1313
BseDI CCNNGG 3 cut(s) 32, 960, 1110
BseGI GGATG 7 cut(s) 247, 462, 726, 1163, 1589, 1688, 1820
BseJI GATNNNNATC 2 cut(s) 1319, 1614
BseLI CCNNNNNNNGG 8 cut(s) 539, 550, 557, 778, 1195, 1213, 1351, 1702
BseMI GCAATG 4 cut(s) 904, 1645, 1657, 2181
BseMII CTCAG 1 cut(s) 1064
BseNI ACTGG 2 cut(s) 294, 1101
BseRI GAGGAG 3 cut(s) 1475, 1775, 1943
BseXI GCAGC 8 cut(s) 366, 625, 1037, 1040, 1114, 1493, 1866, 1871
BsgI GTGCAG 2 cut(s) 1249, 1390
Bsh1236I CGCG 2 cut(s) 1209, 1992
BshFI GGCC 7 cut(s) 349, 543, 1251, 1332, 1383, 1999, 2266
BshVI ATCGAT 1 cut(s) 1313
BsiHKAI GWGCWC 2 cut(s) 911, 1935
BsiHKCI CYCGRG 3 cut(s) 796, 1136, 1898
BsiSI CCGG 4 cut(s) 99, 551, 1434, 1748
BslFI GGGAC 3 cut(s) 789, 875, 1530
BslI CCNNNNNNNGG 8 cut(s) 539, 550, 557, 778, 1195, 1213, 1351, 1702
BsmAI GTCTC 5 cut(s) 1445, 1758, 1869, 1901, 2016
BsmBI CGTCTC 1 cut(s) 1901
BsmFI GGGAC 3 cut(s) 789, 875, 1530
BsmI GAATGC 3 cut(s) 585, 1077, 1820
BsnI GGCC 7 cut(s) 349, 543, 1251, 1332, 1383, 1999, 2266
Bso31I GGTCTC 1 cut(s) 1445
BsoBI CYCGRG 3 cut(s) 796, 1136, 1898
Bsp119I TTCGAA 1 cut(s) 2135
Bsp1286I GDGCHC 3 cut(s) 531, 911, 1935
Bsp1407I TGTACA 1 cut(s) 1657
Bsp143I GATC 3 cut(s) 51, 1002, 1258
Bsp1720I GCTNAGC 1 cut(s) 1073
BspANI GGCC 7 cut(s) 349, 543, 1251, 1332, 1383, 1999, 2266
BspCNI CTCAG 1 cut(s) 1065
BspDI ATCGAT 1 cut(s) 1313
BspFNI CGCG 2 cut(s) 1209, 1992
BspLI GGNNCC 2 cut(s) 30, 530
BspOI GCTAGC 2 cut(s) 1109, 1589
BspT104I TTCGAA 1 cut(s) 2135
BspTI CTTAAG 1 cut(s) 1625
BspTNI GGTCTC 1 cut(s) 1445
BsrDI GCAATG 4 cut(s) 904, 1645, 1657, 2181
BsrGI TGTACA 1 cut(s) 1657
BsrI ACTGG 2 cut(s) 294, 1101
BssECI CCNNGG 3 cut(s) 32, 960, 1110
BssMI GATC 3 cut(s) 51, 1002, 1258
BssNAI GTATAC 1 cut(s) 1640
BssSI CACGAG 1 cut(s) 651
BssT1I CCWWGG 1 cut(s) 32
Bst1107I GTATAC 1 cut(s) 1640
Bst2BI CACGAG 1 cut(s) 651
Bst2UI CCWGG 1 cut(s) 779
Bst4CI ACNGT 3 cut(s) 1389, 1544, 1718
Bst6I CTCTTC 3 cut(s) 1137, 1419, 2019
BstAFI CTTAAG 1 cut(s) 1625
BstAUI TGTACA 1 cut(s) 1657
BstBAI YACGTR 1 cut(s) 1469
BstBI TTCGAA 1 cut(s) 2135
BstC8I GCNNGC 2 cut(s) 1107, 1587
BstDEI CTNAG 3 cut(s) 296, 1064, 1073
BstF5I GGATG 7 cut(s) 247, 462, 726, 1163, 1589, 1688, 1820
BstFNI CGCG 2 cut(s) 1209, 1992
BstHHI GCGC 3 cut(s) 1058, 1884, 1992
BstKTI GATC 3 cut(s) 54, 1005, 1261
BstMAI GTCTC 5 cut(s) 1445, 1758, 1869, 1901, 2016
BstMBI GATC 3 cut(s) 51, 1002, 1258
BstMWI GCNNNNNNNGC 6 cut(s) 260, 644, 952, 1389, 1642, 1996
BstNI CCWGG 1 cut(s) 779
BstNSI RCATGY 1 cut(s) 566
BstSCI CCNGG 3 cut(s) 550, 777, 1746
BstSFI CTRYAG 1 cut(s) 1274
BstUI CGCG 2 cut(s) 1209, 1992
BstV1I GCAGC 8 cut(s) 366, 625, 1037, 1040, 1114, 1493, 1866, 1871
BstV2I GAAGAC 2 cut(s) 980, 1719
BstX2I RGATCY 1 cut(s) 1002
BstYI RGATCY 1 cut(s) 1002
BstZ17I GTATAC 1 cut(s) 1640
Bsu15I ATCGAT 1 cut(s) 1313
BsuRI GGCC 7 cut(s) 349, 543, 1251, 1332, 1383, 1999, 2266
BsuTUI ATCGAT 1 cut(s) 1313
BtgZI GCGATG 3 cut(s) 717, 1309, 1524
BtsCI GGATG 7 cut(s) 247, 462, 726, 1163, 1589, 1688, 1820
BtsI GCAGTG 1 cut(s) 1261
BtsIMutI CAGTG 2 cut(s) 674, 1261
Cac8I GCNNGC 2 cut(s) 1107, 1587
CfoI GCGC 3 cut(s) 1058, 1884, 1992
Cfr13I GGNCC 4 cut(s) 496, 1381, 1916, 2265
ClaI ATCGAT 1 cut(s) 1313
CseI GACGC 1 cut(s) 2090
Csp6I GTAC 4 cut(s) 287, 377, 1658, 1719
CviAII CATG 7 cut(s) 433, 453, 563, 626, 865, 1195, 1620
CviQI GTAC 4 cut(s) 287, 377, 1658, 1719
DdeI CTNAG 3 cut(s) 296, 1064, 1073
DpnI GATC 3 cut(s) 53, 1004, 1260
DpnII GATC 3 cut(s) 51, 1002, 1258
DraI TTTAAA 1 cut(s) 2070
Eam1104I CTCTTC 3 cut(s) 1137, 1419, 2019
EarI CTCTTC 3 cut(s) 1137, 1419, 2019
Ecl136II GAGCTC 1 cut(s) 1933
Eco130I CCWWGG 1 cut(s) 32
Eco147I AGGCCT 1 cut(s) 1332
Eco24I GRGCYC 2 cut(s) 531, 1935
Eco31I GGTCTC 1 cut(s) 1445
Eco32I GATATC 1 cut(s) 1431
Eco47I GGWCC 2 cut(s) 496, 1916
Eco53kI GAGCTC 1 cut(s) 1933
Eco57I CTGAAG 2 cut(s) 1400, 1538
Eco72I CACGTG 1 cut(s) 1469
Eco88I CYCGRG 3 cut(s) 796, 1136, 1898
EcoICRI GAGCTC 1 cut(s) 1933
EcoO109I RGGNCCY 2 cut(s) 496, 1916
EcoRII CCWGG 1 cut(s) 777
EcoRV GATATC 1 cut(s) 1431
EcoT14I CCWWGG 1 cut(s) 32
EcoT22I ATGCAT 1 cut(s) 585
EcoT38I GRGCYC 2 cut(s) 531, 1935
ErhI CCWWGG 1 cut(s) 32
Esp3I CGTCTC 1 cut(s) 1901
FaeI CATG 7 cut(s) 436, 456, 566, 629, 868, 1198, 1623
FaqI GGGAC 3 cut(s) 789, 875, 1530
FatI CATG 7 cut(s) 432, 452, 562, 625, 864, 1194, 1619
FauI CCCGC 3 cut(s) 102, 1385, 1985
FbaI TGATCA 1 cut(s) 51
FblI GTMKAC 1 cut(s) 1639
Fnu4HI GCNGC 9 cut(s) 355, 639, 1051, 1054, 1103, 1507, 1880, 1885, 2254
FokI GGATG 7 cut(s) 254, 469, 733, 1170, 1576, 1675, 1807
FriOI GRGCYC 2 cut(s) 531, 1935
Fsp4HI GCNGC 9 cut(s) 355, 639, 1051, 1054, 1103, 1507, 1880, 1885, 2254
FspBI CTAG 9 cut(s) 380, 539, 1106, 1118, 1242, 1448, 1586, 1790, 2204
FspI TGCGCA 1 cut(s) 1057
GlaI GCGC 3 cut(s) 1057, 1883, 1991
GluI GCNGC 9 cut(s) 355, 639, 1051, 1054, 1103, 1507, 1880, 1885, 2254
GsuI CTGGAG 6 cut(s) 311, 800, 1027, 1118, 1190, 1778
HaeIII GGCC 7 cut(s) 349, 543, 1251, 1332, 1383, 1999, 2266
HapII CCGG 4 cut(s) 99, 551, 1434, 1748
HgaI GACGC 1 cut(s) 2090
HhaI GCGC 3 cut(s) 1058, 1884, 1992
Hin1II CATG 7 cut(s) 436, 456, 566, 629, 868, 1198, 1623
Hin6I GCGC 3 cut(s) 1056, 1882, 1990
HinP1I GCGC 3 cut(s) 1056, 1882, 1990
HincII GTYRAC 4 cut(s) 750, 789, 1146, 1377
HindII GTYRAC 4 cut(s) 750, 789, 1146, 1377
HpaI GTTAAC 1 cut(s) 1377
HpaII CCGG 4 cut(s) 99, 551, 1434, 1748
HphI GGTGA 4 cut(s) 218, 449, 1717, 2179
Hpy188I TCNGA 4 cut(s) 128, 915, 964, 1182
HpyAV CCTTC 9 cut(s) 253, 326, 377, 459, 487, 518, 1676, 1951, 2172
HpyCH4III ACNGT 3 cut(s) 1389, 1544, 1718
HpyCH4IV ACGT 2 cut(s) 683, 1468
HpyF10VI GCNNNNNNNGC 6 cut(s) 260, 644, 952, 1389, 1642, 1996
HpyF3I CTNAG 3 cut(s) 296, 1064, 1073
HpySE526I ACGT 2 cut(s) 683, 1468
Hsp92II CATG 7 cut(s) 436, 456, 566, 629, 868, 1198, 1623
HspAI GCGC 3 cut(s) 1056, 1882, 1990
Ksp22I TGATCA 1 cut(s) 51
KspAI GTTAAC 1 cut(s) 1377
Kzo9I GATC 3 cut(s) 51, 1002, 1258
LmnI GCTCC 9 cut(s) 292, 534, 826, 1039, 1069, 1099, 1131, 1930, 1963
Lsp1109I GCAGC 8 cut(s) 366, 625, 1037, 1040, 1114, 1493, 1866, 1871
LweI GCATC 7 cut(s) 73, 509, 808, 1346, 1598, 2120, 2228
MaeI CTAG 9 cut(s) 380, 539, 1106, 1118, 1242, 1448, 1586, 1790, 2204
MaeII ACGT 2 cut(s) 683, 1468
MaeIII GTNAC 2 cut(s) 932, 1833
MalI GATC 3 cut(s) 53, 1004, 1260
MboI GATC 3 cut(s) 51, 1002, 1258
MfeI CAATTG 1 cut(s) 1904
MflI RGATCY 1 cut(s) 1002
MhlI GDGCHC 3 cut(s) 531, 911, 1935
MlyI GAGTC 5 cut(s) 381, 784, 1732, 1931, 2209
MmeI TCCRAC 2 cut(s) 148, 387
Mph1103I ATGCAT 1 cut(s) 585
MseI TTAA 9 cut(s) 116, 144, 212, 363, 686, 1376, 1424, 1626, 2069
MslI CAYNNNNRTG 2 cut(s) 737, 1650
MspA1I CMGCKG 3 cut(s) 1365, 1506, 2253
MspCI CTTAAG 1 cut(s) 1625
MspI CCGG 4 cut(s) 99, 551, 1434, 1748
MspR9I CCNGG 3 cut(s) 552, 779, 1748
MunI CAATTG 1 cut(s) 1904
Mva1269I GAATGC 3 cut(s) 585, 1077, 1820
MvaI CCWGG 1 cut(s) 779
MvnI CGCG 2 cut(s) 1209, 1992
MwoI GCNNNNNNNGC 6 cut(s) 260, 644, 952, 1389, 1642, 1996
NciI CCSGG 2 cut(s) 552, 1748
NdeII GATC 3 cut(s) 51, 1002, 1258
NheI GCTAGC 2 cut(s) 1105, 1585
NlaIII CATG 7 cut(s) 436, 456, 566, 629, 868, 1198, 1623
NlaIV GGNNCC 2 cut(s) 30, 530
NmeAIII GCCGAG 2 cut(s) 375, 1135
NsbI TGCGCA 1 cut(s) 1057
NsiI ATGCAT 1 cut(s) 585
NspI RCATGY 1 cut(s) 566
NspV TTCGAA 1 cut(s) 2135
PaeR7I CTCGAG 2 cut(s) 1136, 1898
PceI AGGCCT 1 cut(s) 1332
PciI ACATGT 1 cut(s) 562
PcsI WCGNNNNNNNCGW 3 cut(s) 743, 1385, 1896
PctI GAATGC 3 cut(s) 585, 1077, 1820
PfeI GAWTC 5 cut(s) 985, 1024, 1315, 1615, 2146
PflFI GACNNNGTC 1 cut(s) 745
PflMI CCANNNNNTGG 1 cut(s) 1195
PkrI GCNGC 9 cut(s) 356, 640, 1052, 1055, 1104, 1508, 1881, 1886, 2255
PleI GAGTC 5 cut(s) 381, 784, 1731, 1931, 2208
PmaCI CACGTG 1 cut(s) 1469
PmlI CACGTG 1 cut(s) 1469
PpsI GAGTC 5 cut(s) 381, 784, 1731, 1931, 2208
Ppu21I YACGTR 1 cut(s) 1469
PpuMI RGGWCCY 2 cut(s) 496, 1916
PscI ACATGT 1 cut(s) 562
PshBI ATTAAT 3 cut(s) 212, 363, 1424
PsiI TTATAA 1 cut(s) 621
Psp124BI GAGCTC 1 cut(s) 1935
Psp1406I AACGTT 1 cut(s) 683
Psp5II RGGWCCY 2 cut(s) 496, 1916
Psp6I CCWGG 1 cut(s) 777
PspCI CACGTG 1 cut(s) 1469
PspGI CCWGG 1 cut(s) 777
PspN4I GGNNCC 2 cut(s) 30, 530
PspPI GGNCC 4 cut(s) 496, 1381, 1916, 2265
PspPPI RGGWCCY 2 cut(s) 496, 1916
PsuI RGATCY 1 cut(s) 1002
PsyI GACNNNGTC 1 cut(s) 745
PvuII CAGCTG 1 cut(s) 1365
RsaI GTAC 4 cut(s) 288, 378, 1659, 1720
RsaNI GTAC 4 cut(s) 287, 377, 1658, 1719
RseI CAYNNNNRTG 2 cut(s) 737, 1650
SacI GAGCTC 1 cut(s) 1935
SaqAI TTAA 9 cut(s) 116, 144, 212, 363, 686, 1376, 1424, 1626, 2069
SatI GCNGC 9 cut(s) 355, 639, 1051, 1054, 1103, 1507, 1880, 1885, 2254
Sau3AI GATC 3 cut(s) 51, 1002, 1258
Sau96I GGNCC 4 cut(s) 496, 1381, 1916, 2265
SchI GAGTC 5 cut(s) 381, 784, 1732, 1931, 2209
ScrFI CCNGG 3 cut(s) 552, 779, 1748
SduI GDGCHC 3 cut(s) 531, 911, 1935
SfaNI GCATC 7 cut(s) 73, 509, 808, 1346, 1598, 2120, 2228
SfcI CTRYAG 1 cut(s) 1274
Sfr274I CTCGAG 2 cut(s) 1136, 1898
SfuI TTCGAA 1 cut(s) 2135
SinI GGWCC 2 cut(s) 496, 1916
SlaI CTCGAG 2 cut(s) 1136, 1898
SmiMI CAYNNNNRTG 2 cut(s) 737, 1650
SmlI CTYRAG 9 cut(s) 58, 415, 842, 1136, 1441, 1625, 1898, 2117, 2150
SmoI CTYRAG 9 cut(s) 58, 415, 842, 1136, 1441, 1625, 1898, 2117, 2150
SseBI AGGCCT 1 cut(s) 1332
SspI AATATT 1 cut(s) 105
SspMI CTAG 9 cut(s) 380, 539, 1106, 1118, 1242, 1448, 1586, 1790, 2204
SstI GAGCTC 1 cut(s) 1935
StuI AGGCCT 1 cut(s) 1332
StyD4I CCNGG 3 cut(s) 550, 777, 1746
StyI CCWWGG 1 cut(s) 32
TaaI ACNGT 3 cut(s) 1389, 1544, 1718
TaiI ACGT 2 cut(s) 686, 1471
TatI WGTACW 3 cut(s) 286, 376, 1657
TauI GCSGC 1 cut(s) 2256
TfiI GAWTC 5 cut(s) 985, 1024, 1315, 1615, 2146
Tru1I TTAA 9 cut(s) 116, 144, 212, 363, 686, 1376, 1424, 1626, 2069
Tru9I TTAA 9 cut(s) 116, 144, 212, 363, 686, 1376, 1424, 1626, 2069
TscAI CASTG 2 cut(s) 681, 1268
TseI GCWGC 8 cut(s) 354, 638, 1050, 1053, 1102, 1506, 1879, 1884
TspDTI ATGAA 8 cut(s) 258, 421, 441, 915, 1165, 1527, 1587, 1730
TspGWI ACGGA 2 cut(s) 1817, 1992
TspRI CASTG 2 cut(s) 681, 1268
Tth111I GACNNNGTC 1 cut(s) 745
Van91I CCANNNNNTGG 1 cut(s) 1195
Vha464I CTTAAG 1 cut(s) 1625
VpaK11BI GGWCC 2 cut(s) 496, 1916
VspI ATTAAT 3 cut(s) 212, 363, 1424
XapI RAATTY 4 cut(s) 89, 443, 608, 2003
XbaI TCTAGA 4 cut(s) 1117, 1241, 1447, 2203
XceI RCATGY 1 cut(s) 566
XhoI CTCGAG 2 cut(s) 1136, 1898
XmiI GTMKAC 1 cut(s) 1639
XspI CTAG 9 cut(s) 380, 539, 1106, 1118, 1242, 1448, 1586, 1790, 2204
Zsp2I ATGCAT 1 cut(s) 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.