Rmu_sc0010917.1_g000017

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010917.1
Physical Location & Seq
Forward (+)
88914 .. 94680
5767 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010917.1_g000017.1.cds

Sequence Viewer

Length: 4350 bp
atgccaccacctgcgacggacctccaccgtccgctcgcccctaaaccggttgtctcacaccagcgccagcgatccaccaactcggtcgcaccaccgccagagatccacagcccacaccccaaaccagaagtccacccaacccagatcaagtcgaggactcgtagcaccaactcggaatggatcgacaatccccaatccagaagtccaccatctctgaccatccaggctttgacccgccacaaatcccatctcccccgccctcttcatccccagacatgccgcccaaccaacccacaacttccacctgcaagtactgaaccaccaccccccagcaactctgatctcccctaccaccagccatccagcaacaaggcccgtccgacgacagcgtccagtgacgcgccgccggacggaggcaagagagttttttcagaaaccctagcagagagtttcgagatggcaaattttattgcccggacgttggtgaggagagtgttttcactagcgggacaagaattcagtttgcaatggggattcggtcgagaattaacaaagctgcgtgaaacactggggatggttgaagctttgctacgtgatgccgaccatccgcgacacaatcagcagcagggtgaggcggtgcagctgtgggtggcgaagcttgaagacatagccgatgatgctgataatctgttggatgagtgcagatatgaagagctccgggttcaagtggagttgccgacccgaatcggcagaactttgaattccgtttcactctctaaggccagatatcgtcggaaaaaagcacgaaagattcagaaaatcaataaatctttgaagaatctgtgtaaattggcttccggtattgggctagtgtctacgccattgccatctgcggcccctggtaaccgggaaacgtactcgttctttgataaggatgaagagattatcgttggcagggaggaggtcgtgtcccatatagtaacaaactcgaccagtagtcaagcaaatcacctctccgttttggctattgtgggtatgggaggcctcggtaagacaaccgtggcgaaactagtatgccatgatcctacgatagaagggcacttccatgaaaaaatatggatatgtgtgtctactgatttccaagtcgtgatgatattgaggaggatcttgcaatcatttcgacccggagctggagctgcagtagagggcaaggatgagctttgtaaaaccctcaaacaagagctgaaagggaaaagatatcttctcatactggatgatgtttggtgccaggaatctgaaaaatgggaagagttgatcaattgcttgtcgaatgttaatgatacgctggggtccaacatcattgtcactacccgcaacgtgggggttgcatcaaccattgcatcaatcctgcaaacatttacaatgcttgagatggataagctatcagacgaccagtgttggcagatattgaagaacagagcatttccagatggaactgctcatctaaatgaagatcaagaaatccttggaaaggagattgctagaaggtgtgcaggcttaccactagtcgcaaaggttttgggatacaccatgcgctccaaaacaagtgatgggtggaggtcaatagtagaaagtagcatatggaatttgcctggaggagatacaaaaatcttgtcaattttaaagttgagttttaatgatctgaaatcgccagctctaaaacagtgttttgcattctgctctaactttgtcaaagattttgaattcaagagggaggacttaattcgactttggatggctcaaggatggctacatcatttttctactgaggaaagtaatctagatatggaagatataggtgctgaatattttggtattcttttggagaactcttttttccaagatgttagaagagatccctatggaaatatcacctcttgcaagatgcatgatcttgtgcatgatcttgcagaacatgtatccaaatctaggtgggactccaaggagactgaaacaaaaagaggtttgcgctcattttttgttgagagggatcaagtcctttttaacaccttaccaagctttgaagctttgcgagttgtaaaattatgcggtgcagatattaaggtgttgcctgattcagttggaaaaatgaaacacctgaggtatttggatatttccaacacaaaaattagaacactccccaagtctgttggcaagctttataacctacagactttgagaatgaactatcttgagttgagagcgtgtccaaaggaactgaccaatttgatcaacttgagacatatttcttatgatcgcgtattcagtggatggtctccatggccatctgggatggggcgattaacgaaccttcaatcattacctgagttccaggtgcttaagaagataggttgcggaattgaggaactgggcagcttgaaacaattgaaaggtaaattgtctatttattgtctggaatgtgtgacagatatagaaaaagctaagaaagcaaatctagtggagaagtgtatacgtgatttaagcttgagttggtcttggtcgagtacatccaggccgaactgcaatgatgaggatgtactggaagcacttcaaccacaccctaatttggaattcttaaagattgaaaacttcttgggtgataagtttccttcatggatcatgagtaagttgtctctaccctcaaatttgaaagagattaaatttcggggttgcaaagaatgcaaagaagtcccaaagcttggccatctaccgaatcttagatctctttacattgaaatgccaaacctggaacgtctaggatctgacttttacggttatgatccccatgaggctacaacaggttgtcagacgaaggctttgtttcctgcattgaaaagtttgactattcaatacgctgggaagctaattgaatggagtgaaccacaagtattgttgccaacagtggtgtttcaatctcttgagaagcttaatctgcagggttctccccaattaagaagtgctcccagttattttccatctcttcagtcgctgagtctggtgaaaatagatagcggtgtgccggtaacaagtgttctaagcaaactgacaactctcacttatctccatatatcaggtgtgaagggacttgactgcctgcctgaagggatgttaaggaacaacaagaatcttgcacgtttaaagatagattgttgtgaggagttaacttgtattgctccccatggatttggttgttgtgcttctcttcagtcactggtgattgttgggtgtaataaactgaggtatttatctgaggggctacttgcaccctcattagaggagttgcttatatccgactgccccagtctggagtccatcccatttacagaggggattgaatacggcagtcttcaaaccttgcggataaagaaatgctctaccctaacatccatcccaagtttacagggcttctcatcccttcgtgcaataaagatttcggaatgttctgaactattgagcctcccgagtggtctaaactgctgtacctctcttggaaaaataaaaatacgtagctgcagtaagctaaaattcatttcaattgacagtctcccatccctcgtccggttggacataaggacatgtagtagtctagagtctattgatgctttacatggcttcagatgtctgtatgaattcacaatccgagattgtgataaattgacaagtctgcttggatcttttcccattcttcagtgcctggagataagaaactgccccagtctggagacaattccatgttcagccaacctcacaaccctccgcagcttgaaaatttatagttgtgatggattcataagcaaacttagcgagttagcatccctcaccagcttgagaagattggaagttggtgatttttgcaaggagctcgattcattccctgtcataccacaacttcagacactaatgctatctgggtggcctaagctcaagtctctgcatgaacagattcaacacttcacttctctgacatctttgaatataaactccttcgatgaagtggagtctcttccagaatggttgggaagcgtctcttctcttacggtcctcattatagagctttgccataatctaaagtatcttccttcacgccaagctatgcaacgcctcacaaagttaagatccctctacatctgttgtgactgccctttaattaaaagatgcaggaagggcggtccagagtggcccaagatttctcatattccagatctctcccttggtaagatttcttcctactcttcattttactttattacttgttatatatgttgtagctactcatgcaaacttcaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1449

Amino Acids

162.61

Weight (kDa)

8.52

Isoelectric Point (pI)

53.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2223
AarI CACCTGC 2 cut(s) 19, 313
AasI GACNNNNNNGTC 1 cut(s) 388
Acc36I ACCTGC 2 cut(s) 19, 313
AccB1I GGYRCC 1 cut(s) 1284
AccB7I CCANNNNNTGG 1 cut(s) 2759
AccBSI CCGCTC 1 cut(s) 34
AccI GTMKAC 3 cut(s) 875, 1130, 2530
AccII CGCG 3 cut(s) 401, 610, 2319
AcoI YGGCCR 2 cut(s) 2342, 2761
AcuI CTGAAG 6 cut(s) 3026, 3180, 3248, 3658, 3731, 3935
AfaI GTAC 5 cut(s) 313, 917, 2566, 2598, 3541
AflII CTTAAG 1 cut(s) 2399
AflIII ACRYGT 2 cut(s) 1975, 3635
AgeI ACCGGT 1 cut(s) 46
AhdI GACNNNNNGTC 1 cut(s) 996
AhlI ACTAGT 2 cut(s) 1069, 1564
AjnI CCWGG 8 cut(s) 222, 898, 1287, 1651, 2391, 2570, 2805, 3753
Alw21I GWGCWC 3 cut(s) 717, 3022, 3924
AlwNI CAGNNNCTG 3 cut(s) 3049, 3271, 3754
Ama87I CYCGRG 1 cut(s) 3520
AoxI GGCC 9 cut(s) 372, 780, 894, 1042, 2342, 2573, 2761, 3974, 4238
ApeKI GCWGC 7 cut(s) 556, 622, 640, 1196, 2433, 3570, 3819
ArsI GACNNNNNNTTYG 6 cut(s) 114, 146, 1658, 1690, 2860, 2892
AsiGI ACCGGT 1 cut(s) 46
Asp700I GAANNNNTTC 2 cut(s) 2607, 4002
AspLEI GCGC 4 cut(s) 66, 403, 1596, 2031
AspS9I GGNCC 7 cut(s) 19, 373, 895, 1350, 4099, 4229, 4239
AsuC2I CCSGG 4 cut(s) 475, 719, 908, 1185
AsuHPI GGTGA 9 cut(s) 496, 641, 1001, 1924, 2669, 3070, 3286, 3871, 3917
AvaI CYCGRG 1 cut(s) 3520
AvaII GGWCC 4 cut(s) 19, 1350, 4099, 4229
AxyI CCTNAGG 1 cut(s) 2159
BaeGI GKGCMC 1 cut(s) 1101
BaeI ACNNNNGTAYC 2 cut(s) 3523, 3556
BalI TGGCCA 2 cut(s) 2344, 2763
BanI GGYRCC 1 cut(s) 1284
BanII GRGCYC 2 cut(s) 717, 3924
BarI GAAGNNNNNNTAC 6 cut(s) 573, 605, 838, 870, 4267, 4299
BbsI GAAGAC 2 cut(s) 669, 3398
Bbv12I GWGCWC 3 cut(s) 717, 3022, 3924
BbvI GCAGC 7 cut(s) 543, 634, 652, 1183, 2445, 3557, 3831
BceAI ACGGC 1 cut(s) 3415
BcgI CGANNNNNNTGC 4 cut(s) 1160, 1194, 3904, 3938
BciT130I CCWGG 8 cut(s) 224, 900, 1289, 1653, 2393, 2572, 2807, 3755
BciVI GTATCC 2 cut(s) 1577, 1990
BclI TGATCA 2 cut(s) 1314, 2289
BcnI CCSGG 4 cut(s) 475, 719, 908, 1185
BcuI ACTAGT 2 cut(s) 1069, 1564
BfmI CTRYAG 4 cut(s) 1197, 2228, 2993, 3571
BfoI RGCGCY 1 cut(s) 67
BfrI CTTAAG 1 cut(s) 2399
BfuAI ACCTGC 2 cut(s) 19, 313
BfuI GTATCC 2 cut(s) 1577, 1990
BglII AGATCT 2 cut(s) 2780, 4261
BmcAI AGTACT 1 cut(s) 313
Bme18I GGWCC 4 cut(s) 19, 1350, 4099, 4229
BmeRI GACNNNNNGTC 1 cut(s) 996
BmeT110I CYCGRG 1 cut(s) 3520
BmgT120I GGNCC 7 cut(s) 19, 373, 895, 1350, 4099, 4229, 4239
BmiI GGNNCC 3 cut(s) 897, 1286, 1351
BmrI ACTGGG 5 cut(s) 578, 2438, 3018, 3354, 3768
BmsI GCATC 8 cut(s) 586, 667, 1397, 1409, 1935, 3649, 3881, 4205
BmuI ACTGGG 5 cut(s) 578, 2438, 3018, 3354, 3768
BpiI GAAGAC 2 cut(s) 669, 3398
BpmI CTGGAG 5 cut(s) 1212, 1674, 3386, 3776, 3800
Bpu10I CCTNAGC 1 cut(s) 3978
BpuEI CTTGAG 8 cut(s) 1448, 1785, 2273, 2317, 2566, 2999, 3907, 3968
BpuMI CCSGG 4 cut(s) 475, 719, 908, 1185
BsaAI YACGTR 3 cut(s) 593, 2534, 3566
BsaI GGTCTC 1 cut(s) 2340
BsaJI CCNNGG 8 cut(s) 898, 1045, 1059, 1525, 2001, 2339, 3238, 4270
BsaWI WCCGGW 3 cut(s) 46, 857, 3618
BsaXI ACNNNNNCTCC 4 cut(s) 953, 983, 1185, 1215
Bse118I RCCGGY 2 cut(s) 46, 3079
Bse21I CCTNAGG 1 cut(s) 2159
Bse3DI GCAATG 4 cut(s) 533, 881, 1395, 2590
BseBI CCWGG 8 cut(s) 224, 900, 1289, 1653, 2393, 2572, 2807, 3755
BseDI CCNNGG 8 cut(s) 898, 1045, 1059, 1525, 2001, 2339, 3238, 4270
BseMI GCAATG 4 cut(s) 533, 881, 1395, 2590
BseMII CTCAG 6 cut(s) 1818, 2150, 2376, 3041, 3287, 3300
BseRI GAGGAG 6 cut(s) 502, 974, 1174, 1671, 3230, 3350
BseSI GKGCMC 1 cut(s) 1101
BseXI GCAGC 7 cut(s) 543, 634, 652, 1183, 2445, 3557, 3831
BseYI CCCAGC 3 cut(s) 329, 1345, 2915
BsgI GTGCAG 4 cut(s) 659, 721, 1572, 2133
Bsh1236I CGCG 3 cut(s) 401, 610, 2319
Bsh1285I CGRYCG 2 cut(s) 87, 541
BshFI GGCC 9 cut(s) 374, 782, 896, 1044, 2344, 2575, 2763, 3976, 4240
BshNI GGYRCC 1 cut(s) 1284
BshTI ACCGGT 1 cut(s) 46
BsiEI CGRYCG 2 cut(s) 87, 541
BsiHKAI GWGCWC 3 cut(s) 717, 3022, 3924
BsiHKCI CYCGRG 1 cut(s) 3520
BsiSI CCGG 9 cut(s) 47, 407, 475, 718, 858, 907, 1185, 3080, 3619
BslFI GGGAC 5 cut(s) 522, 955, 2009, 2735, 3156
BsmBI CGTCTC 1 cut(s) 4090
BsmFI GGGAC 5 cut(s) 522, 955, 2009, 2735, 3156
BsmI GAATGC 2 cut(s) 1733, 2744
BsnI GGCC 9 cut(s) 374, 782, 896, 1044, 2344, 2575, 2763, 3976, 4240
Bso31I GGTCTC 1 cut(s) 2340
BsoBI CYCGRG 1 cut(s) 3520
Bsp1286I GDGCHC 4 cut(s) 717, 1101, 3022, 3924
Bsp19I CCATGG 2 cut(s) 2339, 3238
BspANI GGCC 9 cut(s) 374, 782, 896, 1044, 2344, 2575, 2763, 3976, 4240
BspCNI CTCAG 6 cut(s) 1819, 2151, 2377, 3042, 3288, 3301
BspFNI CGCG 3 cut(s) 401, 610, 2319
BspHI TCATGA 1 cut(s) 2679
BspLI GGNNCC 3 cut(s) 897, 1286, 1351
BspMAI CTGCAG 3 cut(s) 1201, 2997, 3575
BspMI ACCTGC 2 cut(s) 19, 313
BspQI GCTCTTC 1 cut(s) 705
BspT107I GGYRCC 1 cut(s) 1284
BspTI CTTAAG 1 cut(s) 2399
BspTNI GGTCTC 1 cut(s) 2340
BsrBI CCGCTC 1 cut(s) 34
BsrDI GCAATG 4 cut(s) 533, 881, 1395, 2590
BsrFI RCCGGY 2 cut(s) 46, 3079
BssAI RCCGGY 2 cut(s) 46, 3079
BssECI CCNNGG 8 cut(s) 898, 1045, 1059, 1525, 2001, 2339, 3238, 4270
BssNAI GTATAC 1 cut(s) 2531
BssT1I CCWWGG 5 cut(s) 1525, 2001, 2339, 3238, 4270
Bst1107I GTATAC 1 cut(s) 2531
Bst2UI CCWGG 8 cut(s) 224, 900, 1289, 1653, 2393, 2572, 2807, 3755
Bst4CI ACNGT 7 cut(s) 29, 1060, 1725, 2834, 2962, 3602, 4099
BstAFI CTTAAG 1 cut(s) 2399
BstAPI GCANNNNNTGC 1 cut(s) 2739
BstBAI YACGTR 3 cut(s) 593, 2534, 3566
BstC8I GCNNGC 6 cut(s) 36, 68, 1555, 1713, 2216, 3155
BstDSI CCRYGG 3 cut(s) 1059, 2339, 3238
BstEII GGTNACC 1 cut(s) 902
BstENI CCTNNNNNAGG 1 cut(s) 1529
BstFNI CGCG 3 cut(s) 401, 610, 2319
BstH2I RGCGCY 1 cut(s) 67
BstHHI GCGC 4 cut(s) 66, 403, 1596, 2031
BstMCI CGRYCG 2 cut(s) 87, 541
BstMWI GCNNNNNNNGC 8 cut(s) 677, 1196, 2507, 2739, 2992, 3861, 4224, 4335
BstNI CCWGG 8 cut(s) 224, 900, 1289, 1653, 2393, 2572, 2807, 3755
BstNSI RCATGY 3 cut(s) 279, 1979, 3639
BstPI GGTNACC 1 cut(s) 902
BstSFI CTRYAG 4 cut(s) 1197, 2228, 2993, 3571
BstSLI GKGCMC 1 cut(s) 1101
BstSNI TACGTA 1 cut(s) 3566
BstUI CGCG 3 cut(s) 401, 610, 2319
BstV1I GCAGC 7 cut(s) 543, 634, 652, 1183, 2445, 3557, 3831
BstV2I GAAGAC 2 cut(s) 669, 3398
BstX2I RGATCY 8 cut(s) 102, 1164, 1915, 2780, 2819, 3731, 4175, 4261
BstXI CCANNNNNNTGG 1 cut(s) 3245
BstYI RGATCY 8 cut(s) 102, 1164, 1915, 2780, 2819, 3731, 4175, 4261
BstZ17I GTATAC 1 cut(s) 2531
Bsu36I CCTNAGG 1 cut(s) 2159
BsuI GTATCC 2 cut(s) 1577, 1990
BsuRI GGCC 9 cut(s) 374, 782, 896, 1044, 2344, 2575, 2763, 3976, 4240
BtgI CCRYGG 3 cut(s) 1059, 2339, 3238
BtsIMutI CAGTG 8 cut(s) 400, 566, 1460, 1730, 2332, 2967, 3269, 3755
BveI ACCTGC 2 cut(s) 19, 313
Cac8I GCNNGC 6 cut(s) 36, 68, 1555, 1713, 2216, 3155
CaiI CAGNNNCTG 3 cut(s) 3049, 3271, 3754
CciI TCATGA 1 cut(s) 2679
CfoI GCGC 4 cut(s) 66, 403, 1596, 2031
Cfr10I RCCGGY 2 cut(s) 46, 3079
Cfr13I GGNCC 7 cut(s) 19, 373, 895, 1350, 4099, 4229, 4239
CseI GACGC 3 cut(s) 378, 407, 4072
Csp6I GTAC 5 cut(s) 312, 916, 2565, 2597, 3540
CspAI ACCGGT 1 cut(s) 46
CspCI CAANNNNNGTGG 4 cut(s) 2499, 2534, 2931, 2966
CviQI GTAC 5 cut(s) 312, 916, 2565, 2597, 3540
DraI TTTAAA 2 cut(s) 1683, 3198
DrdI GACNNNNNNGTC 1 cut(s) 388
DriI GACNNNNNGTC 1 cut(s) 996
DseDI GACNNNNNNGTC 1 cut(s) 388
EaeI YGGCCR 2 cut(s) 2342, 2761
Eam1105I GACNNNNNGTC 1 cut(s) 996
Ecl136II GAGCTC 2 cut(s) 715, 3922
Eco105I TACGTA 1 cut(s) 3566
Eco130I CCWWGG 5 cut(s) 1525, 2001, 2339, 3238, 4270
Eco147I AGGCCT 1 cut(s) 1044
Eco24I GRGCYC 2 cut(s) 717, 3924
Eco31I GGTCTC 1 cut(s) 2340
Eco32I GATATC 2 cut(s) 788, 1259
Eco47I GGWCC 4 cut(s) 19, 1350, 4099, 4229
Eco53kI GAGCTC 2 cut(s) 715, 3922
Eco57I CTGAAG 6 cut(s) 3026, 3180, 3248, 3658, 3731, 3935
Eco81I CCTNAGG 1 cut(s) 2159
Eco88I CYCGRG 1 cut(s) 3520
Eco91I GGTNACC 1 cut(s) 902
EcoICRI GAGCTC 2 cut(s) 715, 3922
EcoNI CCTNNNNNAGG 1 cut(s) 1529
EcoO65I GGTNACC 1 cut(s) 902
EcoRI GAATTC 5 cut(s) 515, 760, 1763, 2630, 3689
EcoRII CCWGG 8 cut(s) 222, 898, 1287, 1651, 2391, 2570, 2805, 3753
EcoRV GATATC 2 cut(s) 788, 1259
EcoT14I CCWWGG 5 cut(s) 1525, 2001, 2339, 3238, 4270
EcoT22I ATGCAT 1 cut(s) 1950
EcoT38I GRGCYC 2 cut(s) 717, 3924
ErhI CCWWGG 5 cut(s) 1525, 2001, 2339, 3238, 4270
Esp3I CGTCTC 1 cut(s) 4090
FalI AAGNNNNNCTT 4 cut(s) 1509, 1541, 4072, 4104
FaqI GGGAC 5 cut(s) 522, 955, 2009, 2735, 3156
FauI CCCGC 4 cut(s) 242, 263, 499, 1379
FauNDI CATATG 1 cut(s) 1640
FbaI TGATCA 2 cut(s) 1314, 2289
FblI GTMKAC 3 cut(s) 875, 1130, 2530
FriOI GRGCYC 2 cut(s) 717, 3924
GlaI GCGC 4 cut(s) 65, 402, 1595, 2030
GsaI CCCAGC 3 cut(s) 333, 1349, 2919
GsuI CTGGAG 5 cut(s) 1212, 1674, 3386, 3776, 3800
HaeII RGCGCY 1 cut(s) 67
HaeIII GGCC 9 cut(s) 374, 782, 896, 1044, 2344, 2575, 2763, 3976, 4240
HapII CCGG 9 cut(s) 47, 407, 475, 718, 858, 907, 1185, 3080, 3619
HgaI GACGC 3 cut(s) 378, 407, 4072
HhaI GCGC 4 cut(s) 66, 403, 1596, 2031
Hin6I GCGC 4 cut(s) 64, 401, 1594, 2029
HinP1I GCGC 4 cut(s) 64, 401, 1594, 2029
HincII GTYRAC 1 cut(s) 3222
HindII GTYRAC 1 cut(s) 3222
HindIII AAGCTT 8 cut(s) 582, 656, 2077, 2085, 2216, 2542, 2756, 2984
HpaI GTTAAC 1 cut(s) 3222
HpaII CCGG 9 cut(s) 47, 407, 475, 718, 858, 907, 1185, 3080, 3619
HphI GGTGA 9 cut(s) 496, 641, 1001, 1924, 2669, 3070, 3286, 3871, 3917
Hpy166II GTNNAC 8 cut(s) 133, 206, 876, 1131, 2531, 2939, 3222, 3458
Hpy8I GTNNAC 8 cut(s) 133, 206, 876, 1131, 2531, 2939, 3222, 3458
Hpy99I CGWCG 3 cut(s) 19, 385, 795
HpyCH4III ACNGT 7 cut(s) 29, 1060, 1725, 2834, 2962, 3602, 4099
HpyCH4IV ACGT 8 cut(s) 479, 592, 914, 1377, 2533, 2812, 3193, 3565
HpyF10VI GCNNNNNNNGC 8 cut(s) 677, 1196, 2507, 2739, 2992, 3861, 4224, 4335
HpySE526I ACGT 8 cut(s) 479, 592, 914, 1377, 2533, 2812, 3193, 3565
HspAI GCGC 4 cut(s) 64, 401, 1594, 2029
Ksp22I TGATCA 2 cut(s) 1314, 2289
KspAI GTTAAC 1 cut(s) 3222
LguI GCTCTTC 1 cut(s) 705
LmnI GCTCC 7 cut(s) 720, 1187, 1193, 1601, 3025, 3238, 3919
Lsp1109I GCAGC 7 cut(s) 543, 634, 652, 1183, 2445, 3557, 3831
LweI GCATC 8 cut(s) 586, 667, 1397, 1409, 1935, 3649, 3881, 4205
MaeII ACGT 8 cut(s) 479, 592, 914, 1377, 2533, 2812, 3193, 3565
MaeIII GTNAC 8 cut(s) 395, 902, 979, 1363, 2482, 3082, 3267, 4193
MbiI CCGCTC 1 cut(s) 34
MfeI CAATTG 3 cut(s) 1318, 2444, 3594
MflI RGATCY 8 cut(s) 102, 1164, 1915, 2780, 2819, 3731, 4175, 4261
MhlI GDGCHC 4 cut(s) 717, 1101, 3022, 3924
MlsI TGGCCA 2 cut(s) 2344, 2763
MluNI TGGCCA 2 cut(s) 2344, 2763
MlyI GAGTC 6 cut(s) 151, 1991, 3061, 3377, 3659, 4067
MmeI TCCRAC 8 cut(s) 404, 672, 773, 1377, 2122, 2202, 3375, 3603
Mox20I TGGCCA 2 cut(s) 2344, 2763
Mph1103I ATGCAT 1 cut(s) 1950
MroXI GAANNNNTTC 2 cut(s) 2607, 4002
MscI TGGCCA 2 cut(s) 2344, 2763
MslI CAYNNNNRTG 3 cut(s) 1104, 1506, 2795
Msp20I TGGCCA 2 cut(s) 2344, 2763
MspA1I CMGCKG 1 cut(s) 643
MspCI CTTAAG 1 cut(s) 2399
MspI CCGG 9 cut(s) 47, 407, 475, 718, 858, 907, 1185, 3080, 3619
MunI CAATTG 3 cut(s) 1318, 2444, 3594
Mva1269I GAATGC 2 cut(s) 1733, 2744
MvaI CCWGG 8 cut(s) 224, 900, 1289, 1653, 2393, 2572, 2807, 3755
MvnI CGCG 3 cut(s) 401, 610, 2319
MwoI GCNNNNNNNGC 8 cut(s) 677, 1196, 2507, 2739, 2992, 3861, 4224, 4335
NciI CCSGG 4 cut(s) 475, 719, 908, 1185
NcoI CCATGG 2 cut(s) 2339, 3238
NdeI CATATG 1 cut(s) 1640
NlaIV GGNNCC 3 cut(s) 897, 1286, 1351
NmuCI GTSAC 5 cut(s) 395, 1363, 2482, 3267, 4193
NsiI ATGCAT 1 cut(s) 1950
NspI RCATGY 3 cut(s) 279, 1979, 3639
PacI TTAATTAA 1 cut(s) 4209
PagI TCATGA 1 cut(s) 2679
PaqCI CACCTGC 2 cut(s) 19, 313
PceI AGGCCT 1 cut(s) 1044
PciI ACATGT 2 cut(s) 1975, 3635
PciSI GCTCTTC 1 cut(s) 705
PctI GAATGC 2 cut(s) 1733, 2744
PdmI GAANNNNTTC 2 cut(s) 2607, 4002
PflFI GACNNNGTC 1 cut(s) 388
PflMI CCANNNNNTGG 1 cut(s) 2759
PinAI ACCGGT 1 cut(s) 46
PleI GAGTC 6 cut(s) 151, 1991, 3060, 3376, 3658, 4066
PpsI GAGTC 6 cut(s) 151, 1991, 3060, 3376, 3658, 4066
Ppu21I YACGTR 3 cut(s) 593, 2534, 3566
PscI ACATGT 2 cut(s) 1975, 3635
PsiI TTATAA 1 cut(s) 2223
Psp124BI GAGCTC 2 cut(s) 717, 3924
Psp6I CCWGG 8 cut(s) 222, 898, 1287, 1651, 2391, 2570, 2805, 3753
PspEI GGTNACC 1 cut(s) 902
PspFI CCCAGC 3 cut(s) 329, 1345, 2915
PspGI CCWGG 8 cut(s) 222, 898, 1287, 1651, 2391, 2570, 2805, 3753
PspN4I GGNNCC 3 cut(s) 897, 1286, 1351
PspPI GGNCC 7 cut(s) 19, 373, 895, 1350, 4099, 4229, 4239
PsrI GAACNNNNNNTAC 2 cut(s) 3075, 3107
PstI CTGCAG 3 cut(s) 1201, 2997, 3575
PstNI CAGNNNCTG 3 cut(s) 3049, 3271, 3754
PsuI RGATCY 8 cut(s) 102, 1164, 1915, 2780, 2819, 3731, 4175, 4261
PsyI GACNNNGTC 1 cut(s) 388
PvuII CAGCTG 1 cut(s) 643
RsaI GTAC 5 cut(s) 313, 917, 2566, 2598, 3541
RsaNI GTAC 5 cut(s) 312, 916, 2565, 2597, 3540
RseI CAYNNNNRTG 3 cut(s) 1104, 1506, 2795
SacI GAGCTC 2 cut(s) 717, 3924
SapI GCTCTTC 1 cut(s) 705
Sau96I GGNCC 7 cut(s) 19, 373, 895, 1350, 4099, 4229, 4239
ScaI AGTACT 1 cut(s) 313
SchI GAGTC 6 cut(s) 151, 1991, 3061, 3377, 3659, 4067
SduI GDGCHC 4 cut(s) 717, 1101, 3022, 3924
SfaNI GCATC 8 cut(s) 586, 667, 1397, 1409, 1935, 3649, 3881, 4205
SfcI CTRYAG 4 cut(s) 1197, 2228, 2993, 3571
SinI GGWCC 4 cut(s) 19, 1350, 4099, 4229
SmiMI CAYNNNNRTG 3 cut(s) 1104, 1506, 2795
SmlI CTYRAG 9 cut(s) 1427, 1800, 2252, 2296, 2399, 2545, 2978, 3886, 3983
SmoI CTYRAG 9 cut(s) 1427, 1800, 2252, 2296, 2399, 2545, 2978, 3886, 3983
SnaBI TACGTA 1 cut(s) 3566
SpeI ACTAGT 2 cut(s) 1069, 1564
SseBI AGGCCT 1 cut(s) 1044
SspI AATATT 1 cut(s) 1868
SstI GAGCTC 2 cut(s) 717, 3924
StuI AGGCCT 1 cut(s) 1044
StyI CCWWGG 5 cut(s) 1525, 2001, 2339, 3238, 4270
TaaI ACNGT 7 cut(s) 29, 1060, 1725, 2834, 2962, 3602, 4099
TaiI ACGT 8 cut(s) 482, 595, 917, 1380, 2536, 2815, 3196, 3568
TaqII GACCGA 2 cut(s) 73, 527
TatI WGTACW 3 cut(s) 311, 2564, 2596
TauI GCSGC 3 cut(s) 282, 406, 896
TscAI CASTG 8 cut(s) 400, 573, 1460, 1730, 2332, 2967, 3276, 3755
TseFI GTSAC 5 cut(s) 395, 1363, 2482, 3267, 4193
TseI GCWGC 7 cut(s) 556, 622, 640, 1196, 2433, 3570, 3819
Tsp45I GTSAC 5 cut(s) 395, 1363, 2482, 3267, 4193
TspGWI ACGGA 4 cut(s) 32, 426, 754, 1006
TspRI CASTG 8 cut(s) 400, 573, 1460, 1730, 2332, 2967, 3276, 3755
Tth111I GACNNNGTC 1 cut(s) 388
Van91I CCANNNNNTGG 1 cut(s) 2759
Vha464I CTTAAG 1 cut(s) 2399
VpaK11BI GGWCC 4 cut(s) 19, 1350, 4099, 4229
XagI CCTNNNNNAGG 1 cut(s) 1529
XbaI TCTAGA 2 cut(s) 1840, 3646
XceI RCATGY 3 cut(s) 279, 1979, 3639
XmiI GTMKAC 3 cut(s) 875, 1130, 2530
XmnI GAANNNNTTC 2 cut(s) 2607, 4002
ZrmI AGTACT 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 1950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.