RchiOBHm_Chr3g0468291

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
14347294 .. 14358625
11332 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43421

Sequence Viewer

Length: 2565 bp
ATGTTCATCAAATATTTTGATATTGAAAAGGATGACTTGATCCAACTTTGGATGGCTCAAGGATGGCTTCACCCTTGTTCTAACAACAGCCTAGAGATGGAGGAGAGAGGTAATAAATATTTTAATATCCTATTGGGGAAGTCTTTATTTCAAGACGTTACAAAGGATTATGGTGGTAATGTTACCAAATGTAAGATGCACGATCTTGTGCATGATCTTGCAGAACGTGTATCAAAATCAGGGAACTCACGCTCACTTTTTTCAAATGGAGAAGATCTTGAGAGCAACTTACTTAACTTGAAATCCTTACGTGTCTTAAACTTATACAAGGCAAATATTGAGGTCTTGCCGGATTCTATTGGAAAGTTGAAACACTTGAGGTATTTGAATGTATTGAAAACAAGAATGAAAGCACTTCCCAAATCTATTGGGAAGCTTTATAATCTACAGACACTGAAAATACCTTATCACCTTGAAGAGCTTCCAGGGGAAATTGCAAATTTGATCAACTTGCGGCACATTTATTTTGGTAGATATATGAAAGTTTCAGGTGGGATATTGGCACAGTTCACTAATCTCCGGTCATTACCTTTTCTCAAGGTGGGTAAAGAGACAGGTCCGAGAATTGAGGAATTGAGTGGTTTAAACCAGTTGCACAACACCTTGTCTATTTATGAACTGGAAAATGTAGGAGATGGAGAAGAAGCGCAGAAAGCAAACTTAGTAGAGAAGAAACAGATACGCAAATTGATCCTTCGATGGAAACTCAGTAGGCCAACCCACAATGTGGAGAATGACGACGATGTACTAGAAGGCCTCCGACCACATTCTAGTTTGGAATTTTTGGAGATTCATGGATTCATGGGTACTAAATGTCCATCATGGTTATTGCTAACCAACAATTTGAAAGAAATTGAATTATTGGCCTGCAACAAATGTGAGGGGGTCCCAGTACTTGGGCATTTACCCAATCTCAATTGTGTTAAGATTAAGAGAATGCAGAAACTAACTCGTATAGGATCCGAGTTTTATGGTTATAATCATGTTAACTGTGGAAATGGATCAAGTAAGGAGGCACGGCCTTTGTTCCCTGCTTTGAAAATATTGCATATTGAGAAGGCACGGAACCTGATTGAATGGATGGAAGCGCCAACAGAGAGAGGAAGTAGGGTGGTGTTTCCTTGCCTTGAGGAGCTGATCTTGACTGACTGTGAGCAACTGACAAGTGCTCCCAGTCATTTTCCATCTCTCAAGAAGTTGGTGATAGAAGACATGAGAAGAGGAGGCACGCCAATAGCAAGTATTCTAAGCAATCAACTCACCACTCTCACTTATCTCAGCTTATCCGATGTGGATGGACTTACTTGTCTGCCGGAAGGGATGTTAGAAAACAACAAGAATCTTGCACTTTTGGATATGTGGTATTGTCCGGAGTTAATTTGTATATCTCCCCAATCACAAGGATCTGAGTACTGCTGCGCATCTCTTTCATATTTGCGGATATGGGGTTGTATGAATCTGAAATATTTCCCTGATGGGCTACTCACAGCTTCTCTTAAAGAGCTAAGGTTGGGTTTTTGTTGCCATCTAGAGTTCAACCCAAATGCTATACACGGTGGTCTCACATCCCTTGAAACATTGGAGGTGACGTACTGCTCTAAAATAACGTCCATTCCATTTTCACAAGGCCTCCCATCTCTTGGTGAATTAACTATAGACGGCTGTCGGGAATTATCAAGCCTACCGGGTGGACTGGAATACTGTACCTCTATTCGGAGTTTGAGAATAACATGGTGCCCTAAGGTACCTTCCATTTCAATCGAAAGTCTGAGTACATCCCTCCAAGAGTTGTGTGTAAGTAATCTAGACTCTCTTCCAATTTCACAAGGAGGCTTCACATCACTCCGTCAATTGACAATCGAAAGATACCCAAGTGCACAAATTGGGCCAGAATTTAGTGCCTCTCTTCAAACCCTTGAATCTCTTCAAAAATTGAGTATACGGTTTTGCGATAATGTAGAGACTATTCCGAGTTCAGACAAGCTCACATCCCTCCGCAGCTTGGAGATTTATTGTTGTCCTAAATTAACGTGTCTACCGGATGGGTTAGCAGCATCGTCACAGTCCTGCTGCCTCACCCGTTTGAAGGAATTGAAAATTGGTGGTTTCTGCGAGGAGCTCGATGCATTCCCAGCTTTTCAGGCTATACCACAGCTTGAATCATTAACCATCGAGGGGTGGCCTAAGCTCAAGTCTCTCCCTGAACAAATTCAACACTTGCCTTCTTTAAGACATTTGACGATATCATCCTTTAAGGGAGTGAGGGCTCTTCCAGAATGGTTGGGAAACCTTGCATCTCTTGAGGACTTGAATATTCGGTCGTGCGGTAGTCTGAAGTATCTACCTTCTGTGGAAGCTATGCAACGCCTCACCAAATTGGAAGAGATAGTCATCATCGGCTGTCCGCTTCTAGAAGAAAGATGCAGGGAGGAGAGCGGCCCAGAGTGGCCTAAGATTCGTCATCTTCCATTCATCACGATTGGAGATATAAGAATCGAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

854

Amino Acids

95.98

Weight (kDa)

6.39

Isoelectric Point (pI)

54.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 1 - 74 1.4e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 85 - 339 1.6e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 209 - 333 4.6e-35 R13L1/DRL21 LRRs
LRR_14 PF23598 564 - 742 9.3e-08 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 633 - 693 1.5e-06 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 681 - 821 5e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_14 PF23598 739 - 818 3.9e-07 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 755 - 814 1.2e-07 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 441, 1038
AasI GACNNNNNNGTC 1 cut(s) 1365
Acc16I TGCGCA 1 cut(s) 1480
Acc65I GGTACC 1 cut(s) 1804
AccB1I GGYRCC 2 cut(s) 1794, 1804
AccB7I CCANNNNNTGG 3 cut(s) 787, 956, 1700
AccBSI CCGCTC 1 cut(s) 2496
AccI GTMKAC 2 cut(s) 1999, 2095
AccIII TCCGGA 1 cut(s) 1429
AciI CCGC 6 cut(s) 514, 1498, 2056, 2385, 2465, 2496
AclWI GGATC 6 cut(s) 34, 745, 1014, 1027, 1069, 1471
AcsI RAATTY 4 cut(s) 499, 839, 1952, 2268
AcuI CTGAAG 1 cut(s) 2414
AdeI CACNNNGTG 1 cut(s) 787
AfaI GTAC 8 cut(s) 807, 868, 954, 1472, 1652, 1765, 1806, 1834
AfiI CCNNNNNNNGG 8 cut(s) 97, 787, 956, 1700, 1773, 2062, 2146, 2235
AflIII ACRYGT 3 cut(s) 226, 310, 2090
AjnI CCWGG 1 cut(s) 484
AjuI GAANNNNNNNTTGG 2 cut(s) 2142, 2174
Alw21I GWGCWC 3 cut(s) 1231, 1939, 2181
Alw26I GTCTC 4 cut(s) 605, 1625, 2015, 2259
Alw44I GTGCAC 1 cut(s) 1935
AlwI GGATC 6 cut(s) 34, 745, 1014, 1027, 1069, 1471
AlwNI CAGNNNCTG 1 cut(s) 454
Aor13HI TCCGGA 1 cut(s) 1429
AoxI GGCC 9 cut(s) 773, 814, 924, 1079, 1687, 1946, 2240, 2497, 2507
ApaLI GTGCAC 1 cut(s) 1935
ApeKI GCWGC 4 cut(s) 1476, 2058, 2111, 2130
ApoI RAATTY 4 cut(s) 499, 839, 1952, 2268
Asp700I GAANNNNTTC 4 cut(s) 480, 1526, 1983, 2268
Asp718I GGTACC 1 cut(s) 1804
AspLEI GCGC 3 cut(s) 709, 1150, 1481
AspS9I GGNCC 4 cut(s) 617, 946, 1946, 2498
AsuC2I CCSGG 1 cut(s) 1746
AsuHPI GGTGA 8 cut(s) 62, 461, 1273, 1312, 1657, 1715, 2128, 2422
AvaII GGWCC 2 cut(s) 617, 946
AxyI CCTNAGG 1 cut(s) 1800
BaeGI GKGCMC 2 cut(s) 1799, 1939
BaeI ACNNNNGTAYC 2 cut(s) 1918, 1951
BamHI GGATCC 1 cut(s) 1019
BanI GGYRCC 2 cut(s) 1794, 1804
BanII GRGCYC 2 cut(s) 2181, 2329
BbsI GAAGAC 1 cut(s) 1275
Bbv12I GWGCWC 3 cut(s) 1231, 1939, 2181
BbvI GCAGC 4 cut(s) 1463, 2070, 2117, 2123
BceAI ACGGC 2 cut(s) 1094, 1735
BciT130I CCWGG 1 cut(s) 486
BclI TGATCA 1 cut(s) 504
BcnI CCSGG 1 cut(s) 1746
BcoDI GTCTC 4 cut(s) 605, 1625, 2015, 2259
BfaI CTAG 6 cut(s) 92, 809, 831, 1589, 1865, 2471
BfmI CTRYAG 2 cut(s) 446, 1713
BfoI RGCGCY 1 cut(s) 1151
BglII AGATCT 1 cut(s) 274
BisI GCNGC 6 cut(s) 515, 1477, 2059, 2112, 2131, 2497
BlsI GCNGC 6 cut(s) 516, 1478, 2060, 2113, 2132, 2498
BmcAI AGTACT 2 cut(s) 954, 1472
Bme1390I CCNGG 2 cut(s) 486, 1746
Bme18I GGWCC 2 cut(s) 617, 946
BmgT120I GGNCC 4 cut(s) 617, 946, 1946, 2498
BmiI GGNNCC 6 cut(s) 947, 948, 1021, 1127, 1796, 1806
BmrFI CCNGG 2 cut(s) 486, 1746
BmrI ACTGGG 2 cut(s) 944, 1227
BmsI GCATC 6 cut(s) 186, 1490, 2123, 2173, 2363, 2471
BmuI ACTGGG 2 cut(s) 944, 1227
BoxI GACNNNNGTC 1 cut(s) 1722
BpiI GAAGAC 1 cut(s) 1275
Bpu10I CCTNAGC 2 cut(s) 1565, 2244
BpuEI CTTGAG 8 cut(s) 42, 299, 397, 581, 1208, 1235, 2234, 2381
BpuMI CCSGG 1 cut(s) 1746
BsaAI YACGTR 1 cut(s) 311
BsaBI GATNNNNATC 1 cut(s) 2450
BsaI GGTCTC 1 cut(s) 1625
BsaJI CCNNGG 1 cut(s) 485
BsaWI WCCGGW 3 cut(s) 579, 1429, 2098
BsaXI ACNNNNNCTCC 6 cut(s) 1213, 1243, 1634, 1664, 1674, 1704
Bsc4I CCNNNNNNNGG 8 cut(s) 97, 787, 956, 1700, 1773, 2062, 2146, 2235
Bse1I ACTGG 5 cut(s) 649, 684, 950, 1233, 1758
Bse21I CCTNAGG 1 cut(s) 1800
Bse8I GATNNNNATC 1 cut(s) 2450
BseAI TCCGGA 1 cut(s) 1429
BseBI CCWGG 1 cut(s) 486
BseDI CCNNGG 1 cut(s) 485
BseJI GATNNNNATC 1 cut(s) 2450
BseLI CCNNNNNNNGG 8 cut(s) 97, 787, 956, 1700, 1773, 2062, 2146, 2235
BseMII CTCAG 4 cut(s) 781, 1351, 1458, 1820
BseNI ACTGG 5 cut(s) 649, 684, 950, 1233, 1758
BseRI GAGGAG 5 cut(s) 116, 1205, 1296, 2189, 2504
BseSI GKGCMC 2 cut(s) 1799, 1939
BseXI GCAGC 4 cut(s) 1463, 2070, 2117, 2123
BseYI CCCAGC 1 cut(s) 2191
Bsh1285I CGRYCG 1 cut(s) 2381
BshFI GGCC 9 cut(s) 775, 816, 926, 1081, 1689, 1948, 2242, 2499, 2509
BshNI GGYRCC 2 cut(s) 1794, 1804
BsiEI CGRYCG 1 cut(s) 2381
BsiHKAI GWGCWC 3 cut(s) 1231, 1939, 2181
BsiSI CCGG 6 cut(s) 350, 580, 1373, 1430, 1745, 2099
BslFI GGGAC 1 cut(s) 932
BslI CCNNNNNNNGG 8 cut(s) 97, 787, 956, 1700, 1773, 2062, 2146, 2235
BsmAI GTCTC 4 cut(s) 605, 1625, 2015, 2259
BsmFI GGGAC 1 cut(s) 932
BsmI GAATGC 2 cut(s) 1002, 2186
BsnI GGCC 9 cut(s) 775, 816, 926, 1081, 1689, 1948, 2242, 2499, 2509
Bso31I GGTCTC 1 cut(s) 1625
Bsp1286I GDGCHC 5 cut(s) 1231, 1799, 1939, 2181, 2329
Bsp13I TCCGGA 1 cut(s) 1429
BspACI CCGC 6 cut(s) 514, 1498, 2056, 2385, 2465, 2496
BspANI GGCC 9 cut(s) 775, 816, 926, 1081, 1689, 1948, 2242, 2499, 2509
BspCNI CTCAG 4 cut(s) 780, 1350, 1459, 1821
BspEI TCCGGA 1 cut(s) 1429
BspLI GGNNCC 6 cut(s) 947, 948, 1021, 1127, 1796, 1806
BspPI GGATC 6 cut(s) 34, 745, 1014, 1027, 1069, 1471
BspQI GCTCTTC 2 cut(s) 471, 2334
BspT107I GGYRCC 2 cut(s) 1794, 1804
BspTNI GGTCTC 1 cut(s) 1625
BsrBI CCGCTC 1 cut(s) 2496
BsrI ACTGG 5 cut(s) 649, 684, 950, 1233, 1758
BssECI CCNNGG 1 cut(s) 485
BssNAI GTATAC 1 cut(s) 2000
Bst1107I GTATAC 1 cut(s) 2000
Bst2UI CCWGG 1 cut(s) 486
Bst4CI ACNGT 7 cut(s) 567, 1052, 1211, 1616, 1763, 2004, 2124
Bst6I CTCTTC 7 cut(s) 471, 1273, 1878, 1971, 1989, 2334, 2436
BstBAI YACGTR 1 cut(s) 311
BstC8I GCNNGC 2 cut(s) 928, 1289
BstH2I RGCGCY 1 cut(s) 1151
BstHHI GCGC 3 cut(s) 709, 1150, 1481
BstMAI GTCTC 4 cut(s) 605, 1625, 2015, 2259
BstMCI CGRYCG 1 cut(s) 2381
BstMWI GCNNNNNNNGC 3 cut(s) 713, 2192, 2201
BstNI CCWGG 1 cut(s) 486
BstPAI GACNNNNGTC 1 cut(s) 1722
BstSCI CCNGG 2 cut(s) 484, 1744
BstSFI CTRYAG 2 cut(s) 446, 1713
BstSLI GKGCMC 2 cut(s) 1799, 1939
BstV1I GCAGC 4 cut(s) 1463, 2070, 2117, 2123
BstV2I GAAGAC 1 cut(s) 1275
BstX2I RGATCY 3 cut(s) 274, 1019, 1463
BstYI RGATCY 3 cut(s) 274, 1019, 1463
BstZ17I GTATAC 1 cut(s) 2000
Bsu36I CCTNAGG 1 cut(s) 1800
BsuRI GGCC 9 cut(s) 775, 816, 926, 1081, 1689, 1948, 2242, 2499, 2509
BtsIMutI CAGTG 1 cut(s) 452
Cac8I GCNNGC 2 cut(s) 928, 1289
CaiI CAGNNNCTG 1 cut(s) 454
CfoI GCGC 3 cut(s) 709, 1150, 1481
Cfr13I GGNCC 4 cut(s) 617, 946, 1946, 2498
Csp6I GTAC 8 cut(s) 806, 867, 953, 1471, 1651, 1764, 1805, 1833
CviAII CATG 7 cut(s) 212, 854, 862, 882, 1043, 1273, 1791
CviQI GTAC 8 cut(s) 806, 867, 953, 1471, 1651, 1764, 1805, 1833
DraI TTTAAA 1 cut(s) 645
DraIII CACNNNGTG 1 cut(s) 787
DrdI GACNNNNNNGTC 1 cut(s) 1365
DseDI GACNNNNNNGTC 1 cut(s) 1365
Eam1104I CTCTTC 7 cut(s) 471, 1273, 1878, 1971, 1989, 2334, 2436
EarI CTCTTC 7 cut(s) 471, 1273, 1878, 1971, 1989, 2334, 2436
Ecl136II GAGCTC 1 cut(s) 2179
Eco147I AGGCCT 2 cut(s) 816, 1689
Eco24I GRGCYC 2 cut(s) 2181, 2329
Eco31I GGTCTC 1 cut(s) 1625
Eco32I GATATC 1 cut(s) 2304
Eco47I GGWCC 2 cut(s) 617, 946
Eco53kI GAGCTC 1 cut(s) 2179
Eco57I CTGAAG 1 cut(s) 2414
Eco81I CCTNAGG 1 cut(s) 1800
EcoICRI GAGCTC 1 cut(s) 2179
EcoO109I RGGNCCY 1 cut(s) 946
EcoRII CCWGG 1 cut(s) 484
EcoRV GATATC 1 cut(s) 2304
EcoT22I ATGCAT 1 cut(s) 2188
EcoT38I GRGCYC 2 cut(s) 2181, 2329
FaeI CATG 7 cut(s) 215, 857, 865, 885, 1046, 1276, 1794
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 51, 83
FaqI GGGAC 1 cut(s) 932
FatI CATG 7 cut(s) 211, 853, 861, 881, 1042, 1272, 1790
FbaI TGATCA 1 cut(s) 504
FblI GTMKAC 2 cut(s) 1999, 2095
Fnu4HI GCNGC 6 cut(s) 515, 1477, 2059, 2112, 2131, 2497
FriOI GRGCYC 2 cut(s) 2181, 2329
Fsp4HI GCNGC 6 cut(s) 515, 1477, 2059, 2112, 2131, 2497
FspBI CTAG 6 cut(s) 92, 809, 831, 1589, 1865, 2471
FspI TGCGCA 1 cut(s) 1480
GlaI GCGC 3 cut(s) 708, 1149, 1480
GluI GCNGC 6 cut(s) 515, 1477, 2059, 2112, 2131, 2497
GsaI CCCAGC 1 cut(s) 2195
HaeII RGCGCY 1 cut(s) 1151
HaeIII GGCC 9 cut(s) 775, 816, 926, 1081, 1689, 1948, 2242, 2499, 2509
HapII CCGG 6 cut(s) 350, 580, 1373, 1430, 1745, 2099
HhaI GCGC 3 cut(s) 709, 1150, 1481
Hin1II CATG 7 cut(s) 215, 857, 865, 885, 1046, 1276, 1794
Hin6I GCGC 3 cut(s) 707, 1148, 1479
HinP1I GCGC 3 cut(s) 707, 1148, 1479
HincII GTYRAC 1 cut(s) 1048
HindII GTYRAC 1 cut(s) 1048
HindIII AAGCTT 1 cut(s) 434
HpaI GTTAAC 1 cut(s) 1048
HpaII CCGG 6 cut(s) 350, 580, 1373, 1430, 1745, 2099
HphI GGTGA 8 cut(s) 62, 461, 1273, 1312, 1657, 1715, 2128, 2422
Hpy166II GTNNAC 6 cut(s) 570, 1048, 1751, 1937, 2000, 2096
Hpy8I GTNNAC 6 cut(s) 570, 1048, 1751, 1937, 2000, 2096
Hpy99I CGWCG 1 cut(s) 803
HpyAV CCTTC 8 cut(s) 764, 806, 1111, 1370, 1818, 2140, 2292, 2415
HpyCH4III ACNGT 7 cut(s) 567, 1052, 1211, 1616, 1763, 2004, 2124
HpyCH4IV ACGT 6 cut(s) 156, 226, 310, 1649, 1667, 2090
HpyF10VI GCNNNNNNNGC 3 cut(s) 713, 2192, 2201
HpySE526I ACGT 6 cut(s) 156, 226, 310, 1649, 1667, 2090
Hsp92II CATG 7 cut(s) 215, 857, 865, 885, 1046, 1276, 1794
HspAI GCGC 3 cut(s) 707, 1148, 1479
KflI GGGWCCC 1 cut(s) 946
Kpn2I TCCGGA 1 cut(s) 1429
KpnI GGTACC 1 cut(s) 1808
Ksp22I TGATCA 1 cut(s) 504
KspAI GTTAAC 1 cut(s) 1048
LguI GCTCTTC 2 cut(s) 471, 2334
LmnI GCTCC 3 cut(s) 1192, 1234, 2176
Lsp1109I GCAGC 4 cut(s) 1463, 2070, 2117, 2123
LweI GCATC 6 cut(s) 186, 1490, 2123, 2173, 2363, 2471
MaeI CTAG 6 cut(s) 92, 809, 831, 1589, 1865, 2471
MaeII ACGT 6 cut(s) 156, 226, 310, 1649, 1667, 2090
MaeIII GTNAC 4 cut(s) 157, 181, 1645, 2118
MbiI CCGCTC 1 cut(s) 2496
MfeI CAATTG 2 cut(s) 976, 1910
MflI RGATCY 3 cut(s) 274, 1019, 1463
MhlI GDGCHC 5 cut(s) 1231, 1799, 1939, 2181, 2329
MlyI GAGTC 1 cut(s) 1862
MmeI TCCRAC 2 cut(s) 67, 844
Mph1103I ATGCAT 1 cut(s) 2188
MroI TCCGGA 1 cut(s) 1429
MroXI GAANNNNTTC 4 cut(s) 480, 1526, 1983, 2268
MspI CCGG 6 cut(s) 350, 580, 1373, 1430, 1745, 2099
MspR9I CCNGG 2 cut(s) 486, 1746
MssI GTTTAAAC 1 cut(s) 645
MunI CAATTG 2 cut(s) 976, 1910
Mva1269I GAATGC 2 cut(s) 1002, 2186
MvaI CCWGG 1 cut(s) 486
MwoI GCNNNNNNNGC 3 cut(s) 713, 2192, 2201
NciI CCSGG 1 cut(s) 1746
NlaIII CATG 7 cut(s) 215, 857, 865, 885, 1046, 1276, 1794
NlaIV GGNNCC 6 cut(s) 947, 948, 1021, 1127, 1796, 1806
NmuCI GTSAC 2 cut(s) 1645, 2118
NsbI TGCGCA 1 cut(s) 1480
NsiI ATGCAT 1 cut(s) 2188
PceI AGGCCT 2 cut(s) 816, 1689
PciSI GCTCTTC 2 cut(s) 471, 2334
PctI GAATGC 2 cut(s) 1002, 2186
PdmI GAANNNNTTC 4 cut(s) 480, 1526, 1983, 2268
PfeI GAWTC 9 cut(s) 353, 850, 858, 1399, 1516, 1979, 2219, 2515, 2553
PflMI CCANNNNNTGG 3 cut(s) 787, 956, 1700
PkrI GCNGC 6 cut(s) 516, 1478, 2060, 2113, 2132, 2498
PleI GAGTC 1 cut(s) 1862
PmeI GTTTAAAC 1 cut(s) 645
PpsI GAGTC 1 cut(s) 1862
Ppu21I YACGTR 1 cut(s) 311
PpuMI RGGWCCY 1 cut(s) 946
PshAI GACNNNNGTC 1 cut(s) 1722
PsiI TTATAA 2 cut(s) 441, 1038
Psp124BI GAGCTC 1 cut(s) 2181
Psp5II RGGWCCY 1 cut(s) 946
Psp6I CCWGG 1 cut(s) 484
PspFI CCCAGC 1 cut(s) 2191
PspGI CCWGG 1 cut(s) 484
PspN4I GGNNCC 6 cut(s) 947, 948, 1021, 1127, 1796, 1806
PspPI GGNCC 4 cut(s) 617, 946, 1946, 2498
PspPPI RGGWCCY 1 cut(s) 946
PstNI CAGNNNCTG 1 cut(s) 454
PsuI RGATCY 3 cut(s) 274, 1019, 1463
RsaI GTAC 8 cut(s) 807, 868, 954, 1472, 1652, 1765, 1806, 1834
RsaNI GTAC 8 cut(s) 806, 867, 953, 1471, 1651, 1764, 1805, 1833
SacI GAGCTC 1 cut(s) 2181
SapI GCTCTTC 2 cut(s) 471, 2334
SatI GCNGC 6 cut(s) 515, 1477, 2059, 2112, 2131, 2497
Sau96I GGNCC 4 cut(s) 617, 946, 1946, 2498
ScaI AGTACT 2 cut(s) 954, 1472
SchI GAGTC 1 cut(s) 1862
ScrFI CCNGG 2 cut(s) 486, 1746
SduI GDGCHC 5 cut(s) 1231, 1799, 1939, 2181, 2329
SfaNI GCATC 6 cut(s) 186, 1490, 2123, 2173, 2363, 2471
SfcI CTRYAG 2 cut(s) 446, 1713
SinI GGWCC 2 cut(s) 617, 946
SmlI CTYRAG 8 cut(s) 57, 278, 376, 596, 1187, 1250, 2249, 2360
SmoI CTYRAG 8 cut(s) 57, 278, 376, 596, 1187, 1250, 2249, 2360
SseBI AGGCCT 2 cut(s) 816, 1689
SsiI CCGC 6 cut(s) 514, 1498, 2056, 2385, 2465, 2496
SspI AATATT 6 cut(s) 14, 119, 337, 1104, 1526, 2374
SspMI CTAG 6 cut(s) 92, 809, 831, 1589, 1865, 2471
SstI GAGCTC 1 cut(s) 2181
StuI AGGCCT 2 cut(s) 816, 1689
StyD4I CCNGG 2 cut(s) 484, 1744
TaaI ACNGT 7 cut(s) 567, 1052, 1211, 1616, 1763, 2004, 2124
TaiI ACGT 6 cut(s) 159, 229, 313, 1652, 1670, 2093
TaqI TCGA 6 cut(s) 757, 1821, 1920, 2181, 2232, 2556
TaqII GACCGA 1 cut(s) 2367
TatI WGTACW 4 cut(s) 805, 952, 1470, 1832
TauI GCSGC 2 cut(s) 517, 2499
TfiI GAWTC 9 cut(s) 353, 850, 858, 1399, 1516, 1979, 2219, 2515, 2553
TscAI CASTG 1 cut(s) 459
TseFI GTSAC 2 cut(s) 1645, 2118
TseI GCWGC 4 cut(s) 1476, 2058, 2111, 2130
Tsp45I GTSAC 2 cut(s) 1645, 2118
TspDTI ATGAA 8 cut(s) 422, 554, 690, 842, 850, 1479, 1529, 2521
TspGWI ACGGA 2 cut(s) 1138, 1895
TspRI CASTG 1 cut(s) 459
Van91I CCANNNNNTGG 3 cut(s) 787, 956, 1700
VneI GTGCAC 1 cut(s) 1935
VpaK11BI GGWCC 2 cut(s) 617, 946
XapI RAATTY 4 cut(s) 499, 839, 1952, 2268
XbaI TCTAGA 3 cut(s) 1588, 1864, 2470
XmiI GTMKAC 2 cut(s) 1999, 2095
XmnI GAANNNNTTC 4 cut(s) 480, 1526, 1983, 2268
XspI CTAG 6 cut(s) 92, 809, 831, 1589, 1865, 2471
ZrmI AGTACT 2 cut(s) 954, 1472
Zsp2I ATGCAT 1 cut(s) 2188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.