Rmu_sc0000830.1_g000062

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000830.1
Physical Location & Seq
Forward (+)
275173 .. 279088
3916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000830.1_g000062.1.cds

Sequence Viewer

Length: 1599 bp
atggcagaatttctgttcacttttgctgctgagggaatactgaccaaggtgacttcgctcgctgctcaagaattcagtcttgtattgggtttcaaagaagatctggcacagctgcgtgactcattcctcaagattcaagctatgctaagagatgtcgaccattcacaagttcgaggggaggctgtggaaatgtgggtgaaggatcttgaagacatagctaacgaagccgatgatgtcttggatgaaattgggtatgaagttctccgacgcaaagtagaactccgagaccagatgaagaaaaaggtgaaaaatttcttctcccactccaatcccattgcctttcgcttacaaatggcacataaaatcaagaaaatcaacacatctttggtgaaattattcaatcaggcagctggccctattgggttagttgctaggacattagcagatgcaacctctcaagatattgaagtacttgacagggagaccgtctccagctttgatagcgatgagaagctcataattggaagagaggaagtcgtgtcagatatagtcaaaaccttgatcaagtctcactataacgaagaaaactatcttcccgttttggctattgtgggaatggcaggtctaggaaagacaactttggctaaatcaatatatcacgactctgagatcgataaacacttccatgaaaaaatatgggtttgtgtatcaaccccttttgaagccaaaacaatcttaagagggatcttagaatctctgaaaccagagaaagccgcaatacagagcaaggatgcggtttgtaaattcattcgagaagaggtgaaagagaaaagataccttctcgtactcgacgatgtttggagtgaagatcctgaaaaatggaaggagttgaggagttgtttgttaacagttaacgatacccaaggaagcagcatcattgtcactacccgtagtgacaaagttgcagaagtcatggagactcttcctaggtgtgatttgagaaaagtatctgatcatgaatgttggctcataatgaaggataaagccattccagttgggagtcctcctatgtctgaagagcagcagacaattggtagagagatcgctaaaagatgtggaggtgtaccactagcggcaaagagaattcaaggagagaatgtggcggcttctccggcaggtttttccgattccggccatgtcgtggtcttgcacctatatcagaagcttcctctagatgtggccgacctattcatggtattttctcattcagatgataagccaagaaagataatcgaggagaagaagtttttgagtcttccggcgaagtttggttttgacttaggtatcaaacttgtttcctttgtcgagctctacctccctatatacttgaatttcaatttggacgagatttgcagaaatcggaatattgaggttttgatggtcactatgggttcgctggccgaactaacacatgggtcaatataccttgactcagcacagccgcagcaatgggtcttgccggcccaaaccacccttaactgtgcgccataccgagctgtaattaaacgagccatgctcgtgccaaagcagcccatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

532

Amino Acids

59.97

Weight (kDa)

5.94

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 611, 1166
AccB7I CCANNNNNTGG 1 cut(s) 1201
AccI GTMKAC 1 cut(s) 156
AciI CCGC 5 cut(s) 774, 794, 1133, 1163, 1502
AclWI GGATC 3 cut(s) 210, 752, 863
AcoI YGGCCR 3 cut(s) 1192, 1239, 1458
AcsI RAATTY 6 cut(s) 8, 71, 310, 803, 1143, 1390
AcuI CTGAAG 1 cut(s) 1095
AfaI GTAC 3 cut(s) 471, 846, 1125
AfiI CCNNNNNNNGG 2 cut(s) 1201, 1252
AflII CTTAAG 1 cut(s) 736
AgsI TTSAA 9 cut(s) 94, 137, 209, 400, 467, 722, 1148, 1390, 1396
AjuI GAANNNNNNNTTGG 2 cut(s) 1382, 1414
AluBI AGCT 9 cut(s) 112, 140, 218, 410, 495, 514, 1225, 1369, 1556
AluI AGCT 9 cut(s) 112, 140, 218, 410, 495, 514, 1225, 1369, 1556
Alw21I GWGCWC 1 cut(s) 1371
Alw26I GTCTC 5 cut(s) 279, 476, 493, 573, 971
AlwI GGATC 3 cut(s) 210, 752, 863
AoxI GGCC 5 cut(s) 412, 1192, 1239, 1458, 1521
ApeKI GCWGC 8 cut(s) 26, 62, 112, 407, 930, 1081, 1504, 1588
ApoI RAATTY 6 cut(s) 8, 71, 310, 803, 1143, 1390
Asp700I GAANNNNTTC 2 cut(s) 311, 395
AspA2I CCTAGG 1 cut(s) 986
AspLEI GCGC 1 cut(s) 1546
AspS9I GGNCC 2 cut(s) 413, 1522
AsuHPI GGTGA 5 cut(s) 61, 208, 316, 400, 832
AvrII CCTAGG 1 cut(s) 986
BaeI ACNNNNGTAYC 2 cut(s) 1327, 1360
BanII GRGCYC 1 cut(s) 1371
BauI CACGAG 1 cut(s) 1577
BbsI GAAGAC 2 cut(s) 216, 1307
Bbv12I GWGCWC 1 cut(s) 1371
BbvCI CCTCAGC 1 cut(s) 30
BbvI GCAGC 7 cut(s) 13, 49, 99, 419, 942, 1093, 1516
BccI CCATC 1 cut(s) 1432
BclI TGATCA 2 cut(s) 561, 1012
BcoDI GTCTC 5 cut(s) 279, 476, 493, 573, 971
BfaI CTAG 5 cut(s) 432, 626, 987, 1130, 1232
BfrI CTTAAG 1 cut(s) 736
BfuAI ACCTGC 2 cut(s) 611, 1166
BglII AGATCT 1 cut(s) 100
BlnI CCTAGG 1 cut(s) 986
BmcAI AGTACT 1 cut(s) 471
BmgT120I GGNCC 2 cut(s) 413, 1522
BmsI GCATC 3 cut(s) 436, 781, 942
BpiI GAAGAC 2 cut(s) 216, 1307
BplI GAGNNNNNCTC 4 cut(s) 473, 505, 1560, 1592
BpmI CTGGAG 1 cut(s) 475
Bpu10I CCTNAGC 1 cut(s) 30
BpuEI CTTGAG 3 cut(s) 51, 113, 441
Bsa29I ATCGAT 1 cut(s) 672
BsaI GGTCTC 2 cut(s) 279, 476
BsaJI CCNNGG 3 cut(s) 45, 922, 986
BsaXI ACNNNNNCTCC 4 cut(s) 1143, 1173, 1289, 1319
Bsc4I CCNNNNNNNGG 2 cut(s) 1201, 1252
Bse118I RCCGGY 1 cut(s) 1519
Bse1I ACTGG 1 cut(s) 1052
Bse3DI GCAATG 2 cut(s) 333, 1514
BseCI ATCGAT 1 cut(s) 672
BseDI CCNNGG 3 cut(s) 45, 922, 986
BseGI GGATG 2 cut(s) 247, 796
BseLI CCNNNNNNNGG 2 cut(s) 1201, 1252
BseMI GCAATG 2 cut(s) 333, 1514
BseMII CTCAG 3 cut(s) 21, 657, 1506
BseNI ACTGG 1 cut(s) 1052
BseRI GAGGAG 2 cut(s) 907, 1310
BseXI GCAGC 7 cut(s) 13, 49, 99, 419, 942, 1093, 1516
BshFI GGCC 5 cut(s) 414, 1194, 1241, 1460, 1523
BshVI ATCGAT 1 cut(s) 672
BsiHKAI GWGCWC 1 cut(s) 1371
BsiSI CCGG 4 cut(s) 1172, 1191, 1319, 1520
BslI CCNNNNNNNGG 2 cut(s) 1201, 1252
BsmAI GTCTC 5 cut(s) 279, 476, 493, 573, 971
BsmBI CGTCTC 1 cut(s) 493
BsnI GGCC 5 cut(s) 414, 1194, 1241, 1460, 1523
Bso31I GGTCTC 2 cut(s) 279, 476
Bsp1286I GDGCHC 1 cut(s) 1371
Bsp143I GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
BspACI CCGC 5 cut(s) 774, 794, 1133, 1163, 1502
BspANI GGCC 5 cut(s) 414, 1194, 1241, 1460, 1523
BspCNI CTCAG 3 cut(s) 22, 658, 1505
BspDI ATCGAT 1 cut(s) 672
BspHI TCATGA 1 cut(s) 1015
BspMI ACCTGC 2 cut(s) 611, 1166
BspPI GGATC 3 cut(s) 210, 752, 863
BspQI GCTCTTC 1 cut(s) 1071
BspTI CTTAAG 1 cut(s) 736
BspTNI GGTCTC 2 cut(s) 279, 476
BsrDI GCAATG 2 cut(s) 333, 1514
BsrFI RCCGGY 1 cut(s) 1519
BsrI ACTGG 1 cut(s) 1052
BssAI RCCGGY 1 cut(s) 1519
BssECI CCNNGG 3 cut(s) 45, 922, 986
BssMI GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
BssSI CACGAG 1 cut(s) 1577
BssT1I CCWWGG 3 cut(s) 45, 922, 986
Bst2BI CACGAG 1 cut(s) 1577
Bst4CI ACNGT 3 cut(s) 487, 910, 1541
Bst6I CTCTTC 4 cut(s) 520, 810, 987, 1071
BstAFI CTTAAG 1 cut(s) 736
BstC8I GCNNGC 4 cut(s) 60, 412, 1458, 1521
BstDEI CTNAG 6 cut(s) 30, 146, 666, 748, 1339, 1492
BstF5I GGATG 2 cut(s) 247, 796
BstHHI GCGC 1 cut(s) 1546
BstKTI GATC 8 cut(s) 103, 205, 564, 672, 747, 871, 1015, 1104
BstMAI GTCTC 5 cut(s) 279, 476, 493, 573, 971
BstMBI GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
BstMWI GCNNNNNNNGC 4 cut(s) 224, 501, 1172, 1588
BstV1I GCAGC 7 cut(s) 13, 49, 99, 419, 942, 1093, 1516
BstV2I GAAGAC 2 cut(s) 216, 1307
BstX2I RGATCY 4 cut(s) 100, 202, 744, 868
BstYI RGATCY 4 cut(s) 100, 202, 744, 868
Bsu15I ATCGAT 1 cut(s) 672
BsuRI GGCC 5 cut(s) 414, 1194, 1241, 1460, 1523
BsuTUI ATCGAT 1 cut(s) 672
BtgZI GCGATG 1 cut(s) 519
BtsCI GGATG 2 cut(s) 247, 796
BveI ACCTGC 2 cut(s) 611, 1166
Cac8I GCNNGC 4 cut(s) 60, 412, 1458, 1521
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 1 cut(s) 1546
Cfr10I RCCGGY 1 cut(s) 1519
Cfr13I GGNCC 2 cut(s) 413, 1522
ClaI ATCGAT 1 cut(s) 672
CseI GACGC 1 cut(s) 276
Csp6I GTAC 3 cut(s) 470, 845, 1124
CviAII CATG 7 cut(s) 686, 973, 1016, 1196, 1252, 1472, 1573
CviQI GTAC 3 cut(s) 470, 845, 1124
DdeI CTNAG 6 cut(s) 30, 146, 666, 748, 1339, 1492
DpnI GATC 8 cut(s) 102, 204, 563, 671, 746, 870, 1014, 1103
DpnII GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
EaeI YGGCCR 3 cut(s) 1192, 1239, 1458
Eam1104I CTCTTC 4 cut(s) 520, 810, 987, 1071
EarI CTCTTC 4 cut(s) 520, 810, 987, 1071
Ecl136II GAGCTC 1 cut(s) 1369
Eco130I CCWWGG 3 cut(s) 45, 922, 986
Eco24I GRGCYC 1 cut(s) 1371
Eco31I GGTCTC 2 cut(s) 279, 476
Eco53kI GAGCTC 1 cut(s) 1369
Eco57I CTGAAG 1 cut(s) 1095
EcoICRI GAGCTC 1 cut(s) 1369
EcoRI GAATTC 2 cut(s) 71, 1143
EcoT14I CCWWGG 3 cut(s) 45, 922, 986
EcoT38I GRGCYC 1 cut(s) 1371
ErhI CCWWGG 3 cut(s) 45, 922, 986
Esp3I CGTCTC 1 cut(s) 493
FaeI CATG 7 cut(s) 689, 976, 1019, 1199, 1255, 1475, 1576
FatI CATG 7 cut(s) 685, 972, 1015, 1195, 1251, 1471, 1572
FbaI TGATCA 2 cut(s) 561, 1012
FblI GTMKAC 1 cut(s) 156
FokI GGATG 2 cut(s) 254, 803
FriOI GRGCYC 1 cut(s) 1371
FspBI CTAG 5 cut(s) 432, 626, 987, 1130, 1232
GlaI GCGC 1 cut(s) 1545
GsuI CTGGAG 1 cut(s) 475
HaeIII GGCC 5 cut(s) 414, 1194, 1241, 1460, 1523
HapII CCGG 4 cut(s) 1172, 1191, 1319, 1520
HgaI GACGC 1 cut(s) 276
HhaI GCGC 1 cut(s) 1546
Hin1II CATG 7 cut(s) 689, 976, 1019, 1199, 1255, 1475, 1576
Hin6I GCGC 1 cut(s) 1544
HinP1I GCGC 1 cut(s) 1544
HincII GTYRAC 3 cut(s) 157, 906, 913
HindII GTYRAC 3 cut(s) 157, 906, 913
HindIII AAGCTT 1 cut(s) 1223
HinfI GANTC 9 cut(s) 119, 133, 662, 752, 979, 1060, 1187, 1312, 1490
HpaI GTTAAC 2 cut(s) 906, 913
HpaII CCGG 4 cut(s) 1172, 1191, 1319, 1520
HphI GGTGA 5 cut(s) 61, 208, 316, 400, 832
Hpy166II GTNNAC 5 cut(s) 18, 157, 906, 913, 1124
Hpy8I GTNNAC 5 cut(s) 18, 157, 906, 913, 1124
Hpy99I CGWCG 2 cut(s) 270, 854
HpyAV CCTTC 4 cut(s) 193, 848, 877, 1030
HpyCH4III ACNGT 3 cut(s) 487, 910, 1541
HpyCH4V TGCA 4 cut(s) 449, 965, 1210, 1413
HpyF10VI GCNNNNNNNGC 4 cut(s) 224, 501, 1172, 1588
HpyF3I CTNAG 6 cut(s) 30, 146, 666, 748, 1339, 1492
Hsp92II CATG 7 cut(s) 689, 976, 1019, 1199, 1255, 1475, 1576
HspAI GCGC 1 cut(s) 1544
KroI GCCGGC 1 cut(s) 1519
KroNI GCCGGC 1 cut(s) 1521
Ksp22I TGATCA 2 cut(s) 561, 1012
KspAI GTTAAC 2 cut(s) 906, 913
Kzo9I GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
LguI GCTCTTC 1 cut(s) 1071
Lsp1109I GCAGC 7 cut(s) 13, 49, 99, 419, 942, 1093, 1516
LweI GCATC 3 cut(s) 436, 781, 942
MaeI CTAG 5 cut(s) 432, 626, 987, 1130, 1232
MaeIII GTNAC 5 cut(s) 49, 116, 940, 953, 1441
MalI GATC 8 cut(s) 102, 204, 563, 671, 746, 870, 1014, 1103
MboI GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
MfeI CAATTG 1 cut(s) 1089
MflI RGATCY 4 cut(s) 100, 202, 744, 868
MhlI GDGCHC 1 cut(s) 1371
MlyI GAGTC 6 cut(s) 113, 656, 973, 1069, 1321, 1484
MmeI TCCRAC 1 cut(s) 289
MroNI GCCGGC 1 cut(s) 1519
MroXI GAANNNNTTC 2 cut(s) 311, 395
MseI TTAA 5 cut(s) 737, 905, 912, 1536, 1563
MslI CAYNNNNRTG 3 cut(s) 684, 1269, 1577
MspA1I CMGCKG 2 cut(s) 112, 410
MspCI CTTAAG 1 cut(s) 736
MspI CCGG 4 cut(s) 1172, 1191, 1319, 1520
MunI CAATTG 1 cut(s) 1089
MwoI GCNNNNNNNGC 4 cut(s) 224, 501, 1172, 1588
NaeI GCCGGC 1 cut(s) 1521
NdeII GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
NgoMIV GCCGGC 1 cut(s) 1519
NlaIII CATG 7 cut(s) 689, 976, 1019, 1199, 1255, 1475, 1576
NmuCI GTSAC 5 cut(s) 49, 116, 940, 953, 1441
PagI TCATGA 1 cut(s) 1015
PciSI GCTCTTC 1 cut(s) 1071
PcsI WCGNNNNNNNCGW 1 cut(s) 849
PdiI GCCGGC 1 cut(s) 1521
PdmI GAANNNNTTC 2 cut(s) 311, 395
PfeI GAWTC 3 cut(s) 133, 752, 1187
PflMI CCANNNNNTGG 1 cut(s) 1201
PleI GAGTC 6 cut(s) 113, 656, 973, 1068, 1320, 1484
PpsI GAGTC 6 cut(s) 113, 656, 973, 1068, 1320, 1484
Psp124BI GAGCTC 1 cut(s) 1371
PspPI GGNCC 2 cut(s) 413, 1522
PsuI RGATCY 4 cut(s) 100, 202, 744, 868
PvuII CAGCTG 2 cut(s) 112, 410
RsaI GTAC 3 cut(s) 471, 846, 1125
RsaNI GTAC 3 cut(s) 470, 845, 1124
RseI CAYNNNNRTG 3 cut(s) 684, 1269, 1577
SacI GAGCTC 1 cut(s) 1371
SalI GTCGAC 1 cut(s) 155
SapI GCTCTTC 1 cut(s) 1071
SaqAI TTAA 5 cut(s) 737, 905, 912, 1536, 1563
Sau3AI GATC 8 cut(s) 100, 202, 561, 669, 744, 868, 1012, 1101
Sau96I GGNCC 2 cut(s) 413, 1522
ScaI AGTACT 1 cut(s) 471
SchI GAGTC 6 cut(s) 113, 656, 973, 1069, 1321, 1484
SduI GDGCHC 1 cut(s) 1371
SfaNI GCATC 3 cut(s) 436, 781, 942
SmiMI CAYNNNNRTG 3 cut(s) 684, 1269, 1577
SmlI CTYRAG 4 cut(s) 66, 128, 456, 736
SmoI CTYRAG 4 cut(s) 66, 128, 456, 736
SsiI CCGC 5 cut(s) 774, 794, 1133, 1163, 1502
SspI AATATT 1 cut(s) 1426
SspMI CTAG 5 cut(s) 432, 626, 987, 1130, 1232
SstI GAGCTC 1 cut(s) 1371
StyI CCWWGG 3 cut(s) 45, 922, 986
TaaI ACNGT 3 cut(s) 487, 910, 1541
TaqI TCGA 7 cut(s) 156, 172, 672, 811, 849, 1293, 1365
TatI WGTACW 1 cut(s) 469
TauI GCSGC 4 cut(s) 776, 1136, 1166, 1504
TfiI GAWTC 3 cut(s) 133, 752, 1187
Tru1I TTAA 5 cut(s) 737, 905, 912, 1536, 1563
Tru9I TTAA 5 cut(s) 737, 905, 912, 1536, 1563
TseFI GTSAC 5 cut(s) 49, 116, 940, 953, 1441
TseI GCWGC 8 cut(s) 26, 62, 112, 407, 930, 1081, 1504, 1588
Tsp45I GTSAC 5 cut(s) 49, 116, 940, 953, 1441
TspDTI ATGAA 8 cut(s) 258, 270, 308, 702, 796, 1032, 1049, 1240
Van91I CCANNNNNTGG 1 cut(s) 1201
Vha464I CTTAAG 1 cut(s) 736
XapI RAATTY 6 cut(s) 8, 71, 310, 803, 1143, 1390
XbaI TCTAGA 1 cut(s) 1231
XmaJI CCTAGG 1 cut(s) 986
XmiI GTMKAC 1 cut(s) 156
XmnI GAANNNNTTC 2 cut(s) 311, 395
XspI CTAG 5 cut(s) 432, 626, 987, 1130, 1232
ZrmI AGTACT 1 cut(s) 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.