disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 13 - 97 | 7.4e-21 | Rx N-terminal domain |
| nSTAND1 | PF20703 | 168 - 326 | 8.8e-06 | Novel STAND NTPase 1 |
| NB-ARC | PF00931 | 178 - 350 | 5.5e-34 | NB-ARC domain |
| NACHT | PF05729 | 200 - 329 | 4.1e-06 | NACHT domain |
| WHD_DRP | PF23559 | 437 - 510 | 4.9e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 526 - 768 | 1.8e-25 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 645 - 768 | 2.7e-33 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 1115 - 1255 | 7.3e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 1168 - 1263 | 1.6e-08 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 1189 - 1253 | 3.2e-08 | R13L1/DRL21 LRRs |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1749 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2667 |
| AbsI | CCTCGAGG | 1 cut(s) | 2489 |
| Acc36I | ACCTGC | 2 cut(s) | 611, 1761 |
| Acc65I | GGTACC | 1 cut(s) | 3106 |
| AccB1I | GGYRCC | 2 cut(s) | 3106, 3260 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2092, 2261, 3257 |
| AccI | GTMKAC | 2 cut(s) | 156, 3043 |
| AccII | CGCG | 1 cut(s) | 2383 |
| AciI | CCGC | 6 cut(s) | 774, 794, 1133, 1822, 2383, 2800 |
| AclI | AACGTT | 1 cut(s) | 2939 |
| AclWI | GGATC | 6 cut(s) | 210, 752, 863, 1342, 2332, 2374 |
| AcuI | CTGAAG | 1 cut(s) | 1095 |
| AdeI | CACNNNGTG | 2 cut(s) | 2092, 2918 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1405, 2092, 2261, 3075, 3246, 3257, 3364, 3448 |
| AflII | CTTAAG | 1 cut(s) | 736 |
| AflIII | ACRYGT | 3 cut(s) | 1534, 1618, 3392 |
| AjnI | CCWGG | 1 cut(s) | 1927 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3444, 3476 |
| Alw21I | GWGCWC | 2 cut(s) | 2533, 3483 |
| AlwI | GGATC | 6 cut(s) | 210, 752, 863, 1342, 2332, 2374 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1928 |
| Ama87I | CYCGRG | 2 cut(s) | 2489, 3143 |
| AoxI | GGCC | 7 cut(s) | 412, 2078, 2119, 2384, 2424, 3248, 3799 |
| ApeKI | GCWGC | 9 cut(s) | 26, 62, 112, 407, 930, 1081, 2232, 2778, 3413 |
| AseI | ATTAAT | 1 cut(s) | 3011 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 311, 395, 1237, 1788, 3570 |
| Asp718I | GGTACC | 1 cut(s) | 3106 |
| AspA2I | CCTAGG | 1 cut(s) | 986 |
| AspLEI | GCGC | 3 cut(s) | 1161, 2383, 2455 |
| AspS9I | GGNCC | 7 cut(s) | 413, 1925, 2425, 2660, 3248, 3667, 3800 |
| AsuC2I | CCSGG | 2 cut(s) | 2428, 3048 |
| AsuII | TTCGAA | 1 cut(s) | 3271 |
| AvaI | CYCGRG | 2 cut(s) | 2489, 3143 |
| AvaII | GGWCC | 3 cut(s) | 1925, 2660, 3667 |
| AvrII | CCTAGG | 1 cut(s) | 986 |
| AxyI | CCTNAGG | 1 cut(s) | 3102 |
| BaeGI | GKGCMC | 2 cut(s) | 3101, 3241 |
| BanI | GGYRCC | 2 cut(s) | 3106, 3260 |
| BanII | GRGCYC | 1 cut(s) | 3483 |
| BauI | CACGAG | 1 cut(s) | 3186 |
| BbsI | GAAGAC | 1 cut(s) | 216 |
| Bbv12I | GWGCWC | 2 cut(s) | 2533, 3483 |
| BbvCI | CCTCAGC | 1 cut(s) | 30 |
| BbvI | GCAGC | 9 cut(s) | 13, 49, 99, 419, 942, 1093, 2219, 2765, 3425 |
| BceAI | ACGGC | 1 cut(s) | 3814 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1287, 1321, 3402, 3436, 3800, 3834 |
| BciT130I | CCWGG | 1 cut(s) | 1929 |
| BciVI | GTATCC | 1 cut(s) | 3841 |
| BclI | TGATCA | 3 cut(s) | 561, 1012, 1812 |
| BcnI | CCSGG | 2 cut(s) | 2428, 3048 |
| BfoI | RGCGCY | 1 cut(s) | 2456 |
| BfrI | CTTAAG | 1 cut(s) | 736 |
| BfuAI | ACCTGC | 2 cut(s) | 611, 1761 |
| BfuI | GTATCC | 1 cut(s) | 3841 |
| BglII | AGATCT | 1 cut(s) | 100 |
| BlnI | CCTAGG | 1 cut(s) | 986 |
| BmcAI | AGTACT | 3 cut(s) | 471, 2259, 2774 |
| Bme1390I | CCNGG | 3 cut(s) | 1929, 2428, 3048 |
| Bme18I | GGWCC | 3 cut(s) | 1925, 2660, 3667 |
| BmeT110I | CYCGRG | 2 cut(s) | 2489, 3143 |
| BmgT120I | GGNCC | 7 cut(s) | 413, 1925, 2425, 2660, 3248, 3667, 3800 |
| BmiI | GGNNCC | 3 cut(s) | 2661, 3108, 3262 |
| BmrFI | CCNGG | 3 cut(s) | 1929, 2428, 3048 |
| BmrI | ACTGGG | 1 cut(s) | 2249 |
| BmuI | ACTGGG | 1 cut(s) | 2249 |
| BpiI | GAAGAC | 1 cut(s) | 216 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 473, 505 |
| BpmI | CTGGAG | 1 cut(s) | 475 |
| Bpu10I | CCTNAGC | 2 cut(s) | 30, 1365 |
| Bpu14I | TTCGAA | 1 cut(s) | 3271 |
| BpuEI | CTTGAG | 8 cut(s) | 51, 113, 441, 1705, 1889, 2537, 3536, 3683 |
| BpuMI | CCSGG | 2 cut(s) | 2428, 3048 |
| Bsa29I | ATCGAT | 1 cut(s) | 672 |
| BsaAI | YACGTR | 1 cut(s) | 2048 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3752 |
| BsaI | GGTCTC | 4 cut(s) | 279, 476, 2927, 2996 |
| BsaJI | CCNNGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2241, 2271, 2976, 3006 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1405, 2092, 2261, 3075, 3246, 3257, 3364, 3448 |
| Bse1I | ACTGG | 4 cut(s) | 1052, 1957, 1992, 2255 |
| Bse21I | CCTNAGG | 1 cut(s) | 3102 |
| Bse3DI | GCAATG | 1 cut(s) | 333 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3752 |
| BseBI | CCWGG | 1 cut(s) | 1929 |
| BseCI | ATCGAT | 1 cut(s) | 672 |
| BseDI | CCNNGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| BseJI | GATNNNNATC | 1 cut(s) | 3752 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1405, 2092, 2261, 3075, 3246, 3257, 3364, 3448 |
| BseMI | GCAATG | 1 cut(s) | 333 |
| BseMII | CTCAG | 8 cut(s) | 21, 657, 1379, 1900, 2319, 2653, 2993, 3122 |
| BseNI | ACTGG | 4 cut(s) | 1052, 1957, 1992, 2255 |
| BseRI | GAGGAG | 4 cut(s) | 907, 2435, 3491, 3806 |
| BseSI | GKGCMC | 2 cut(s) | 3101, 3241 |
| BseXI | GCAGC | 9 cut(s) | 13, 49, 99, 419, 942, 1093, 2219, 2765, 3425 |
| BseYI | CCCAGC | 1 cut(s) | 3493 |
| BsgI | GTGCAG | 1 cut(s) | 3706 |
| Bsh1236I | CGCG | 1 cut(s) | 2383 |
| BshFI | GGCC | 7 cut(s) | 414, 2080, 2121, 2386, 2426, 3250, 3801 |
| BshNI | GGYRCC | 2 cut(s) | 3106, 3260 |
| BshVI | ATCGAT | 1 cut(s) | 672 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2533, 3483 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2489, 3143 |
| BsiSI | CCGG | 3 cut(s) | 2428, 2675, 3047 |
| BslFI | GGGAC | 4 cut(s) | 1884, 2237, 2673, 3012 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1405, 2092, 2261, 3075, 3246, 3257, 3364, 3448 |
| BsmBI | CGTCTC | 2 cut(s) | 493, 3286 |
| BsmFI | GGGAC | 4 cut(s) | 1884, 2237, 2673, 3012 |
| BsmI | GAATGC | 1 cut(s) | 3488 |
| BsnI | GGCC | 7 cut(s) | 414, 2080, 2121, 2386, 2426, 3250, 3801 |
| Bso31I | GGTCTC | 4 cut(s) | 279, 476, 2927, 2996 |
| BsoBI | CYCGRG | 2 cut(s) | 2489, 3143 |
| Bsp119I | TTCGAA | 1 cut(s) | 3271 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2533, 3101, 3241, 3483 |
| Bsp1407I | TGTACA | 1 cut(s) | 1632 |
| BspACI | CCGC | 6 cut(s) | 774, 794, 1133, 1822, 2383, 2800 |
| BspANI | GGCC | 7 cut(s) | 414, 2080, 2121, 2386, 2426, 3250, 3801 |
| BspCNI | CTCAG | 8 cut(s) | 22, 658, 1378, 1899, 2320, 2652, 2994, 3123 |
| BspDI | ATCGAT | 1 cut(s) | 672 |
| BspFNI | CGCG | 1 cut(s) | 2383 |
| BspHI | TCATGA | 2 cut(s) | 1015, 1519 |
| BspLI | GGNNCC | 3 cut(s) | 2661, 3108, 3262 |
| BspMI | ACCTGC | 2 cut(s) | 611, 1761 |
| BspPI | GGATC | 6 cut(s) | 210, 752, 863, 1342, 2332, 2374 |
| BspQI | GCTCTTC | 1 cut(s) | 1071 |
| BspT104I | TTCGAA | 1 cut(s) | 3271 |
| BspT107I | GGYRCC | 2 cut(s) | 3106, 3260 |
| BspTI | CTTAAG | 1 cut(s) | 736 |
| BspTNI | GGTCTC | 4 cut(s) | 279, 476, 2927, 2996 |
| BsrDI | GCAATG | 1 cut(s) | 333 |
| BsrGI | TGTACA | 1 cut(s) | 1632 |
| BsrI | ACTGG | 4 cut(s) | 1052, 1957, 1992, 2255 |
| BssECI | CCNNGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| BssSI | CACGAG | 1 cut(s) | 3186 |
| BssT1I | CCWWGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| Bst2BI | CACGAG | 1 cut(s) | 3186 |
| Bst2UI | CCWGG | 1 cut(s) | 1929 |
| Bst6I | CTCTTC | 8 cut(s) | 520, 810, 987, 1071, 1779, 2030, 3180, 3291 |
| BstAFI | CTTAAG | 1 cut(s) | 736 |
| BstAUI | TGTACA | 1 cut(s) | 1632 |
| BstBAI | YACGTR | 1 cut(s) | 2048 |
| BstBI | TTCGAA | 1 cut(s) | 3271 |
| BstC8I | GCNNGC | 4 cut(s) | 60, 412, 2591, 3348 |
| BstFNI | CGCG | 1 cut(s) | 2383 |
| BstH2I | RGCGCY | 1 cut(s) | 2456 |
| BstHHI | GCGC | 3 cut(s) | 1161, 2383, 2455 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 224, 501, 2077, 3494, 3503 |
| BstNI | CCWGG | 1 cut(s) | 1929 |
| BstNSI | RCATGY | 4 cut(s) | 1538, 1622, 1829, 3396 |
| BstSCI | CCNGG | 3 cut(s) | 1927, 2426, 3046 |
| BstSLI | GKGCMC | 2 cut(s) | 3101, 3241 |
| BstSNI | TACGTA | 1 cut(s) | 2048 |
| BstUI | CGCG | 1 cut(s) | 2383 |
| BstV1I | GCAGC | 9 cut(s) | 13, 49, 99, 419, 942, 1093, 2219, 2765, 3425 |
| BstV2I | GAAGAC | 1 cut(s) | 216 |
| BstX2I | RGATCY | 5 cut(s) | 100, 202, 744, 868, 2324 |
| BstYI | RGATCY | 5 cut(s) | 100, 202, 744, 868, 2324 |
| Bsu15I | ATCGAT | 1 cut(s) | 672 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3102 |
| BsuI | GTATCC | 1 cut(s) | 3841 |
| BsuRI | GGCC | 7 cut(s) | 414, 2080, 2121, 2386, 2426, 3250, 3801 |
| BsuTUI | ATCGAT | 1 cut(s) | 672 |
| BtgZI | GCGATG | 1 cut(s) | 519 |
| BtsIMutI | CAGTG | 3 cut(s) | 663, 3686, 3760 |
| BveI | ACCTGC | 2 cut(s) | 611, 1761 |
| Cac8I | GCNNGC | 4 cut(s) | 60, 412, 2591, 3348 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1928 |
| CciI | TCATGA | 2 cut(s) | 1015, 1519 |
| CfoI | GCGC | 3 cut(s) | 1161, 2383, 2455 |
| Cfr13I | GGNCC | 7 cut(s) | 413, 1925, 2425, 2660, 3248, 3667, 3800 |
| ClaI | ATCGAT | 1 cut(s) | 672 |
| CseI | GACGC | 2 cut(s) | 276, 3201 |
| DraI | TTTAAA | 5 cut(s) | 1194, 1432, 1953, 2176, 2962 |
| DraIII | CACNNNGTG | 2 cut(s) | 2092, 2918 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2667 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2667 |
| Eam1104I | CTCTTC | 8 cut(s) | 520, 810, 987, 1071, 1779, 2030, 3180, 3291 |
| EarI | CTCTTC | 8 cut(s) | 520, 810, 987, 1071, 1779, 2030, 3180, 3291 |
| Ecl136II | GAGCTC | 1 cut(s) | 3481 |
| Eco105I | TACGTA | 1 cut(s) | 2048 |
| Eco130I | CCWWGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| Eco147I | AGGCCT | 1 cut(s) | 2121 |
| Eco24I | GRGCYC | 1 cut(s) | 3483 |
| Eco31I | GGTCTC | 4 cut(s) | 279, 476, 2927, 2996 |
| Eco47I | GGWCC | 3 cut(s) | 1925, 2660, 3667 |
| Eco53kI | GAGCTC | 1 cut(s) | 3481 |
| Eco57I | CTGAAG | 1 cut(s) | 1095 |
| Eco81I | CCTNAGG | 1 cut(s) | 3102 |
| Eco88I | CYCGRG | 2 cut(s) | 2489, 3143 |
| EcoICRI | GAGCTC | 1 cut(s) | 3481 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1925, 2660, 3667 |
| EcoRI | GAATTC | 2 cut(s) | 71, 2144 |
| EcoRII | CCWGG | 1 cut(s) | 1927 |
| EcoT14I | CCWWGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| EcoT22I | ATGCAT | 2 cut(s) | 3490, 3836 |
| EcoT38I | GRGCYC | 1 cut(s) | 3483 |
| ErhI | CCWWGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| Esp3I | CGTCTC | 2 cut(s) | 493, 3286 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1328, 1360 |
| FaqI | GGGAC | 4 cut(s) | 1884, 2237, 2673, 3012 |
| FbaI | TGATCA | 3 cut(s) | 561, 1012, 1812 |
| FblI | GTMKAC | 2 cut(s) | 156, 3043 |
| FriOI | GRGCYC | 1 cut(s) | 3483 |
| GlaI | GCGC | 3 cut(s) | 1160, 2382, 2454 |
| GsaI | CCCAGC | 1 cut(s) | 3497 |
| GsuI | CTGGAG | 1 cut(s) | 475 |
| HaeII | RGCGCY | 1 cut(s) | 2456 |
| HaeIII | GGCC | 7 cut(s) | 414, 2080, 2121, 2386, 2426, 3250, 3801 |
| HapII | CCGG | 3 cut(s) | 2428, 2675, 3047 |
| HgaI | GACGC | 2 cut(s) | 276, 3201 |
| HhaI | GCGC | 3 cut(s) | 1161, 2383, 2455 |
| Hin6I | GCGC | 3 cut(s) | 1159, 2381, 2453 |
| HinP1I | GCGC | 3 cut(s) | 1159, 2381, 2453 |
| HincII | GTYRAC | 5 cut(s) | 157, 906, 913, 1878, 2353 |
| HindII | GTYRAC | 5 cut(s) | 157, 906, 913, 1878, 2353 |
| HindIII | AAGCTT | 2 cut(s) | 2069, 3361 |
| HpaI | GTTAAC | 2 cut(s) | 906, 913 |
| HpaII | CCGG | 3 cut(s) | 2428, 2675, 3047 |
| Hpy166II | GTNNAC | 8 cut(s) | 157, 906, 913, 1124, 1878, 2353, 3044, 3053 |
| Hpy8I | GTNNAC | 8 cut(s) | 157, 906, 913, 1124, 1878, 2353, 3044, 3053 |
| Hpy99I | CGWCG | 3 cut(s) | 270, 854, 3424 |
| HpyCH4IV | ACGT | 4 cut(s) | 1464, 2047, 2870, 2939 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 224, 501, 2077, 3494, 3503 |
| HpySE526I | ACGT | 4 cut(s) | 1464, 2047, 2870, 2939 |
| HspAI | GCGC | 3 cut(s) | 1159, 2381, 2453 |
| KpnI | GGTACC | 1 cut(s) | 3110 |
| Ksp22I | TGATCA | 3 cut(s) | 561, 1012, 1812 |
| KspAI | GTTAAC | 2 cut(s) | 906, 913 |
| LguI | GCTCTTC | 1 cut(s) | 1071 |
| LmnI | GCTCC | 3 cut(s) | 1590, 2536, 3478 |
| Lsp1109I | GCAGC | 9 cut(s) | 13, 49, 99, 419, 942, 1093, 2219, 2765, 3425 |
| MaeII | ACGT | 4 cut(s) | 1464, 2047, 2870, 2939 |
| MfeI | CAATTG | 5 cut(s) | 1089, 1665, 2239, 3212, 3840 |
| MflI | RGATCY | 5 cut(s) | 100, 202, 744, 868, 2324 |
| MhlI | GDGCHC | 4 cut(s) | 2533, 3101, 3241, 3483 |
| MlyI | GAGTC | 6 cut(s) | 113, 973, 1069, 2259, 3164, 3700 |
| MmeI | TCCRAC | 3 cut(s) | 289, 1375, 2149 |
| Mph1103I | ATGCAT | 2 cut(s) | 3490, 3836 |
| MroXI | GAANNNNTTC | 5 cut(s) | 311, 395, 1237, 1788, 3570 |
| MslI | CAYNNNNRTG | 1 cut(s) | 684 |
| MspA1I | CMGCKG | 2 cut(s) | 112, 410 |
| MspCI | CTTAAG | 1 cut(s) | 736 |
| MspI | CCGG | 3 cut(s) | 2428, 2675, 3047 |
| MspR9I | CCNGG | 3 cut(s) | 1929, 2428, 3048 |
| MssI | GTTTAAAC | 1 cut(s) | 1953 |
| MunI | CAATTG | 5 cut(s) | 1089, 1665, 2239, 3212, 3840 |
| Mva1269I | GAATGC | 1 cut(s) | 3488 |
| MvaI | CCWGG | 1 cut(s) | 1929 |
| MvnI | CGCG | 1 cut(s) | 2383 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 224, 501, 2077, 3494, 3503 |
| NciI | CCSGG | 2 cut(s) | 2428, 3048 |
| NlaIV | GGNNCC | 3 cut(s) | 2661, 3108, 3262 |
| NmuCI | GTSAC | 8 cut(s) | 49, 116, 940, 953, 1172, 2513, 2882, 2947 |
| NsiI | ATGCAT | 2 cut(s) | 3490, 3836 |
| NspI | RCATGY | 4 cut(s) | 1538, 1622, 1829, 3396 |
| NspV | TTCGAA | 1 cut(s) | 3271 |
| PaeR7I | CTCGAG | 2 cut(s) | 2489, 3143 |
| PagI | TCATGA | 2 cut(s) | 1015, 1519 |
| PceI | AGGCCT | 1 cut(s) | 2121 |
| PciI | ACATGT | 3 cut(s) | 1534, 1618, 3392 |
| PciSI | GCTCTTC | 1 cut(s) | 1071 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 849 |
| PctI | GAATGC | 1 cut(s) | 3488 |
| PdmI | GAANNNNTTC | 5 cut(s) | 311, 395, 1237, 1788, 3570 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2092, 2261, 3257 |
| PfoI | TCCNGGA | 1 cut(s) | 1927 |
| PleI | GAGTC | 6 cut(s) | 113, 973, 1068, 2258, 3164, 3699 |
| PmeI | GTTTAAAC | 1 cut(s) | 1953 |
| PpsI | GAGTC | 6 cut(s) | 113, 973, 1068, 2258, 3164, 3699 |
| Ppu21I | YACGTR | 1 cut(s) | 2048 |
| PpuMI | RGGWCCY | 3 cut(s) | 1925, 2660, 3667 |
| PscI | ACATGT | 3 cut(s) | 1534, 1618, 3392 |
| PshBI | ATTAAT | 1 cut(s) | 3011 |
| PsiI | TTATAA | 1 cut(s) | 1749 |
| Psp124BI | GAGCTC | 1 cut(s) | 3483 |
| Psp1406I | AACGTT | 1 cut(s) | 2939 |
| Psp5II | RGGWCCY | 3 cut(s) | 1925, 2660, 3667 |
| Psp6I | CCWGG | 1 cut(s) | 1927 |
| PspFI | CCCAGC | 1 cut(s) | 3493 |
| PspGI | CCWGG | 1 cut(s) | 1927 |
| PspN4I | GGNNCC | 3 cut(s) | 2661, 3108, 3262 |
| PspPI | GGNCC | 7 cut(s) | 413, 1925, 2425, 2660, 3248, 3667, 3800 |
| PspPPI | RGGWCCY | 3 cut(s) | 1925, 2660, 3667 |
| PspXI | VCTCGAGB | 2 cut(s) | 2489, 3143 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1928 |
| PsuI | RGATCY | 5 cut(s) | 100, 202, 744, 868, 2324 |
| PvuII | CAGCTG | 2 cut(s) | 112, 410 |
| RseI | CAYNNNNRTG | 1 cut(s) | 684 |
| SacI | GAGCTC | 1 cut(s) | 3483 |
| SalI | GTCGAC | 1 cut(s) | 155 |
| SapI | GCTCTTC | 1 cut(s) | 1071 |
| Sau96I | GGNCC | 7 cut(s) | 413, 1925, 2425, 2660, 3248, 3667, 3800 |
| ScaI | AGTACT | 3 cut(s) | 471, 2259, 2774 |
| SchI | GAGTC | 6 cut(s) | 113, 973, 1069, 2259, 3164, 3700 |
| ScrFI | CCNGG | 3 cut(s) | 1929, 2428, 3048 |
| SduI | GDGCHC | 4 cut(s) | 2533, 3101, 3241, 3483 |
| Sfr274I | CTCGAG | 2 cut(s) | 2489, 3143 |
| SfuI | TTCGAA | 1 cut(s) | 3271 |
| SinI | GGWCC | 3 cut(s) | 1925, 2660, 3667 |
| SlaI | CTCGAG | 2 cut(s) | 2489, 3143 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 684 |
| SnaBI | TACGTA | 1 cut(s) | 2048 |
| SseBI | AGGCCT | 1 cut(s) | 2121 |
| SsiI | CCGC | 6 cut(s) | 774, 794, 1133, 1822, 2383, 2800 |
| SspI | AATATT | 1 cut(s) | 1427 |
| SstI | GAGCTC | 1 cut(s) | 3483 |
| StuI | AGGCCT | 1 cut(s) | 2121 |
| StyD4I | CCNGG | 3 cut(s) | 1927, 2426, 3046 |
| StyI | CCWWGG | 5 cut(s) | 45, 922, 986, 1585, 2059 |
| TaiI | ACGT | 4 cut(s) | 1467, 2050, 2873, 2942 |
| TatI | WGTACW | 7 cut(s) | 469, 1632, 2110, 2257, 2772, 2895, 3134 |
| TauI | GCSGC | 4 cut(s) | 776, 1136, 1825, 2386 |
| TscAI | CASTG | 3 cut(s) | 670, 3686, 3767 |
| TseFI | GTSAC | 8 cut(s) | 49, 116, 940, 953, 1172, 2513, 2882, 2947 |
| TseI | GCWGC | 9 cut(s) | 26, 62, 112, 407, 930, 1081, 2232, 2778, 3413 |
| Tsp45I | GTSAC | 8 cut(s) | 49, 116, 940, 953, 1172, 2513, 2882, 2947 |
| TspGWI | ACGGA | 1 cut(s) | 3197 |
| TspRI | CASTG | 3 cut(s) | 670, 3686, 3767 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2092, 2261, 3257 |
| Vha464I | CTTAAG | 1 cut(s) | 736 |
| VpaK11BI | GGWCC | 3 cut(s) | 1925, 2660, 3667 |
| VspI | ATTAAT | 1 cut(s) | 3011 |
| XbaI | TCTAGA | 4 cut(s) | 2890, 3166, 3319, 3772 |
| XceI | RCATGY | 4 cut(s) | 1538, 1622, 1829, 3396 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2354 |
| XhoI | CTCGAG | 2 cut(s) | 2489, 3143 |
| XmaJI | CCTAGG | 1 cut(s) | 986 |
| XmiI | GTMKAC | 2 cut(s) | 156, 3043 |
| XmnI | GAANNNNTTC | 5 cut(s) | 311, 395, 1237, 1788, 3570 |
| ZrmI | AGTACT | 3 cut(s) | 471, 2259, 2774 |
| Zsp2I | ATGCAT | 2 cut(s) | 3490, 3836 |