Rroxscaffold_3G00227440

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
11563954 .. 11566951
2998 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00227440.1

Sequence Viewer

Length: 1530 bp
ATGAATAACCTAAAGCGGATCGGAGCAGATTTTTATGGTTATGATAATGTTTGCCGTAATGTGGGGACAACCAGGACAAGTAAAAGCACAATGACTCTGTTTCCAGCACTGAAAACATTACATATTAGTAGGTGCGGTGAGCTAGTTGAATGGATGGAAGCACCAATGATATCAACAGCTGAAGGATCAGCGGTGGTCGTATTTCCTCACCTTGAAGAGCTATGTATAAAGTATTGTTACCACTTGAGAAATGCTCCAAGTCATTTCCCATCTTTGAAGAAGCTGGAGGTCAACGGCATGGTGAAGAAGATGCCACTAGAAAATATAAGCACTGCAGTAACCACTCTTATATCACTAGAAATATATGATATAGATGAACTCACTTGTCTACCAGAAGGGATGTTGAAGAAGAACAAGAACCTCACGTATTTGGATATAAGGTATTGTGGTCAGTTAACTTGTATTGCTCCCGATGTATATGGGTGTTGCACATTTGTTCGATCACTGCTTCTTAGGAATTGTGGAGTGCTGAGGCATTTACCTAAAGGGATAGAGAAGCTCCCTCTTCTTGACAAGCTAATTATTCATGGGTGTCGAAGCTTAGAGTTGATTCATGGCTTTGCATCTCTTGGTGATTTGAGTGTTGATGGTTGTGTTAATTTATCAAGCCTACTGATTGAGGATTATTGCACCTCTCTTCATTCTTTGGATATAGGGCATTGTCCTAATCTGACCTCAGTTTCAATTCCACATGGCATGTCTTCTCTCCGGAAATTAACAATTGTTCAATGCGGAGGATTATCAAGCCTACCAAATGGGCTCAACAACTGCACTTCTATTCAGGAATTGGATGTAAGGGATTGCTCTAGTCTAGCATCCATTTCAATAGCCAATACACACCTCCTCCGCAGATTGATAGTTGATAGATGTGATGTGTTAAAATCTATTTCAATATCATCATCCTTTCCAGGTCTTCTTGAAGAGTTGTCTATAGAGGGTTGTAATAGTCTAGAATCTATTACATCTCTAGAGGGTTTCACATGTCTTCGTGATTTAGTAATATTGGATTGTGGGAAATTAAAGTATCTGCCGGCAGGGGCATTCCACTGCCTCACTCAATTGAAGACATTGACAATTGGCGGGTTCTCGGAGGAGCTCGATTCCTTCCCTGATTTTCAGCTTCCACCACATTCACAACTTGAAAGTTTAACCTTGTTAGGGTGGCCTAAGCTCAAGTCTCTGCCTCAGCAAGTTCAGCATTTGACTTGTCTAGTGACTTTTTTGATACAAGATTTTAGGGGAATGGAGGCTCTTCCTGAGTGGTTGGGGAATCTCACATCTCTTGAGAAGCTGTATATTTGGGATTGTGAGGATCTCAAGTATCTACCTACTACACCCAAGGCTATGGAATGCGTCGCCAAATTGAAAGAGTTCTCCATTCGTCGATGTCCCCTTCTCAAGGAAAGATGCAGCAAGAAGACCGACCCCGAATGGCCCAAAATTTCTTGCATCCCGAAAATTGACGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

509

Amino Acids

56.66

Weight (kDa)

6.4

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 337 - 483 3.5e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 388
AccIII TCCGGA 1 cut(s) 768
AciI CCGC 6 cut(s) 16, 135, 191, 792, 907, 1140
AclWI GGATC 3 cut(s) 26, 193, 1380
AcsI RAATTY 1 cut(s) 1500
AcuI CTGAAG 1 cut(s) 201
AfiI CCNNNNNNNGG 3 cut(s) 61, 1218, 1459
AflIII ACRYGT 2 cut(s) 1040, 1524
AjiI CACGTC 1 cut(s) 1525
AjnI CCWGG 2 cut(s) 71, 967
Alw21I GWGCWC 1 cut(s) 1158
Alw26I GTCTC 1 cut(s) 1242
AlwI GGATC 3 cut(s) 26, 193, 1380
Aor13HI TCCGGA 1 cut(s) 768
AoxI GGCC 2 cut(s) 1223, 1493
ApeKI GCWGC 1 cut(s) 1470
ApoI RAATTY 1 cut(s) 1500
Asp700I GAANNNNTTC 1 cut(s) 1430
AspS9I GGNCC 1 cut(s) 1494
AsuHPI GGTGA 4 cut(s) 149, 200, 313, 644
BanII GRGCYC 2 cut(s) 822, 1158
BbsI GAAGAC 5 cut(s) 753, 965, 1037, 1130, 1484
Bbv12I GWGCWC 1 cut(s) 1158
BbvCI CCTCAGC 2 cut(s) 530, 1245
BbvI GCAGC 1 cut(s) 1482
BccI CCATC 3 cut(s) 148, 277, 641
BceAI ACGGC 2 cut(s) 39, 310
BciT130I CCWGG 2 cut(s) 73, 969
BcoDI GTCTC 1 cut(s) 1242
BfaI CTAG 8 cut(s) 143, 317, 356, 867, 872, 1010, 1028, 1271
BfmI CTRYAG 2 cut(s) 333, 990
BisI GCNGC 1 cut(s) 1471
BlsI GCNGC 1 cut(s) 1472
Bme1390I CCNGG 2 cut(s) 73, 969
BmgBI CACGTC 1 cut(s) 1525
BmgT120I GGNCC 1 cut(s) 1494
BmrFI CCNGG 2 cut(s) 73, 969
BmsI GCATC 5 cut(s) 300, 632, 884, 1457, 1518
BpiI GAAGAC 5 cut(s) 753, 965, 1037, 1130, 1484
BplI GAGNNNNNCTC 2 cut(s) 238, 270
BpmI CTGGAG 1 cut(s) 305
Bpu10I CCTNAGC 3 cut(s) 530, 1227, 1245
BpuEI CTTGAG 5 cut(s) 265, 1217, 1361, 1364, 1442
BsaAI YACGTR 1 cut(s) 426
BsaJI CCNNGG 1 cut(s) 1398
BsaWI WCCGGW 1 cut(s) 768
BsaXI ACNNNNNCTCC 2 cut(s) 888, 918
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 1218, 1459
Bse118I RCCGGY 1 cut(s) 1090
BseAI TCCGGA 1 cut(s) 768
BseBI CCWGG 2 cut(s) 73, 969
BseDI CCNNGG 1 cut(s) 1398
BseGI GGATG 6 cut(s) 159, 405, 856, 875, 959, 1509
BseLI CCNNNNNNNGG 3 cut(s) 61, 1218, 1459
BseMII CTCAG 4 cut(s) 521, 750, 1259, 1308
BseRI GAGGAG 2 cut(s) 893, 1166
BseXI GCAGC 1 cut(s) 1482
BsgI GTGCAG 1 cut(s) 814
BshFI GGCC 2 cut(s) 1225, 1495
BsiHKAI GWGCWC 1 cut(s) 1158
BsiSI CCGG 2 cut(s) 769, 1091
BslFI GGGAC 2 cut(s) 79, 1434
BslI CCNNNNNNNGG 3 cut(s) 61, 1218, 1459
BsmAI GTCTC 1 cut(s) 1242
BsmFI GGGAC 2 cut(s) 79, 1434
BsmI GAATGC 2 cut(s) 1100, 1415
BsnI GGCC 2 cut(s) 1225, 1495
Bsp1286I GDGCHC 2 cut(s) 822, 1158
Bsp13I TCCGGA 1 cut(s) 768
Bsp143I GATC 4 cut(s) 18, 185, 500, 1372
BspACI CCGC 6 cut(s) 16, 135, 191, 792, 907, 1140
BspANI GGCC 2 cut(s) 1225, 1495
BspCNI CTCAG 4 cut(s) 522, 749, 1258, 1309
BspEI TCCGGA 1 cut(s) 768
BspMAI CTGCAG 1 cut(s) 337
BspPI GGATC 3 cut(s) 26, 193, 1380
BspQI GCTCTTC 2 cut(s) 210, 1317
BsrFI RCCGGY 1 cut(s) 1090
BssAI RCCGGY 1 cut(s) 1090
BssECI CCNNGG 1 cut(s) 1398
BssMI GATC 4 cut(s) 18, 185, 500, 1372
BssT1I CCWWGG 1 cut(s) 1398
Bst2UI CCWGG 2 cut(s) 73, 969
Bst6I CTCTTC 5 cut(s) 210, 570, 702, 975, 1317
BstBAI YACGTR 1 cut(s) 426
BstC8I GCNNGC 1 cut(s) 1092
BstDEI CTNAG 7 cut(s) 512, 530, 601, 736, 1227, 1245, 1317
BstENI CCTNNNNNAGG 1 cut(s) 1457
BstF5I GGATG 6 cut(s) 159, 405, 856, 875, 959, 1509
BstKTI GATC 4 cut(s) 21, 188, 503, 1375
BstMAI GTCTC 1 cut(s) 1242
BstMBI GATC 4 cut(s) 18, 185, 500, 1372
BstMWI GCNNNNNNNGC 1 cut(s) 1255
BstNI CCWGG 2 cut(s) 73, 969
BstNSI RCATGY 2 cut(s) 760, 1044
BstSCI CCNGG 2 cut(s) 71, 967
BstSFI CTRYAG 2 cut(s) 333, 990
BstV1I GCAGC 1 cut(s) 1482
BstV2I GAAGAC 5 cut(s) 753, 965, 1037, 1130, 1484
BstX2I RGATCY 1 cut(s) 1372
BstXI CCANNNNNNTGG 1 cut(s) 1405
BstYI RGATCY 1 cut(s) 1372
BsuRI GGCC 2 cut(s) 1225, 1495
BtrI CACGTC 1 cut(s) 1525
BtsCI GGATG 6 cut(s) 159, 405, 856, 875, 959, 1509
BtsI GCAGTG 3 cut(s) 330, 503, 1105
BtsIMutI CAGTG 4 cut(s) 107, 330, 503, 1105
Cac8I GCNNGC 1 cut(s) 1092
Cfr10I RCCGGY 1 cut(s) 1090
Cfr13I GGNCC 1 cut(s) 1494
CseI GACGC 1 cut(s) 1402
CviAII CATG 6 cut(s) 298, 587, 614, 752, 757, 1041
DdeI CTNAG 7 cut(s) 512, 530, 601, 736, 1227, 1245, 1317
DpnI GATC 4 cut(s) 20, 187, 502, 1374
DpnII GATC 4 cut(s) 18, 185, 500, 1372
Eam1104I CTCTTC 5 cut(s) 210, 570, 702, 975, 1317
EarI CTCTTC 5 cut(s) 210, 570, 702, 975, 1317
Ecl136II GAGCTC 1 cut(s) 1156
Eco130I CCWWGG 1 cut(s) 1398
Eco24I GRGCYC 2 cut(s) 822, 1158
Eco32I GATATC 1 cut(s) 171
Eco53kI GAGCTC 1 cut(s) 1156
Eco57I CTGAAG 1 cut(s) 201
EcoICRI GAGCTC 1 cut(s) 1156
EcoNI CCTNNNNNAGG 1 cut(s) 1457
EcoRII CCWGG 2 cut(s) 71, 967
EcoRV GATATC 1 cut(s) 171
EcoT14I CCWWGG 1 cut(s) 1398
EcoT38I GRGCYC 2 cut(s) 822, 1158
ErhI CCWWGG 1 cut(s) 1398
FaeI CATG 6 cut(s) 301, 590, 617, 755, 760, 1044
FaqI GGGAC 2 cut(s) 79, 1434
FatI CATG 6 cut(s) 297, 586, 613, 751, 756, 1040
FauI CCCGC 1 cut(s) 1133
FblI GTMKAC 1 cut(s) 388
Fnu4HI GCNGC 1 cut(s) 1471
FokI GGATG 6 cut(s) 166, 412, 862, 863, 946, 1496
FriOI GRGCYC 2 cut(s) 822, 1158
Fsp4HI GCNGC 1 cut(s) 1471
FspBI CTAG 8 cut(s) 143, 317, 356, 867, 872, 1010, 1028, 1271
GluI GCNGC 1 cut(s) 1471
GsuI CTGGAG 1 cut(s) 305
HaeIII GGCC 2 cut(s) 1225, 1495
HapII CCGG 2 cut(s) 769, 1091
HgaI GACGC 1 cut(s) 1402
Hin1II CATG 6 cut(s) 301, 590, 617, 755, 760, 1044
HincII GTYRAC 2 cut(s) 292, 456
HindII GTYRAC 2 cut(s) 292, 456
HindIII AAGCTT 1 cut(s) 598
HinfI GANTC 5 cut(s) 94, 610, 1013, 1160, 1330
HpaI GTTAAC 1 cut(s) 456
HpaII CCGG 2 cut(s) 769, 1091
HphI GGTGA 4 cut(s) 149, 200, 313, 644
Hpy166II GTNNAC 3 cut(s) 292, 389, 456
Hpy188I TCNGA 3 cut(s) 23, 732, 1150
Hpy8I GTNNAC 3 cut(s) 292, 389, 456
Hpy99I CGWCG 2 cut(s) 1418, 1446
HpyAV CCTTC 4 cut(s) 176, 389, 1174, 1463
HpyCH4IV ACGT 2 cut(s) 425, 1524
HpyCH4V TGCA 7 cut(s) 335, 489, 623, 690, 831, 1470, 1509
HpyF10VI GCNNNNNNNGC 1 cut(s) 1255
HpyF3I CTNAG 7 cut(s) 512, 530, 601, 736, 1227, 1245, 1317
HpySE526I ACGT 2 cut(s) 425, 1524
Hsp92II CATG 6 cut(s) 301, 590, 617, 755, 760, 1044
Kpn2I TCCGGA 1 cut(s) 768
KroI GCCGGC 1 cut(s) 1090
KroNI GCCGGC 1 cut(s) 1092
KspAI GTTAAC 1 cut(s) 456
Kzo9I GATC 4 cut(s) 18, 185, 500, 1372
LguI GCTCTTC 2 cut(s) 210, 1317
LmnI GCTCC 5 cut(s) 23, 259, 472, 564, 1153
Lsp1109I GCAGC 1 cut(s) 1482
LweI GCATC 5 cut(s) 300, 632, 884, 1457, 1518
MaeI CTAG 8 cut(s) 143, 317, 356, 867, 872, 1010, 1028, 1271
MaeII ACGT 2 cut(s) 425, 1524
MaeIII GTNAC 3 cut(s) 236, 337, 1273
MalI GATC 4 cut(s) 20, 187, 502, 1374
MboI GATC 4 cut(s) 18, 185, 500, 1372
MfeI CAATTG 3 cut(s) 780, 1118, 1134
MflI RGATCY 1 cut(s) 1372
MhlI GDGCHC 2 cut(s) 822, 1158
MlyI GAGTC 1 cut(s) 88
MroI TCCGGA 1 cut(s) 768
MroNI GCCGGC 1 cut(s) 1090
MroXI GAANNNNTTC 1 cut(s) 1430
MseI TTAA 6 cut(s) 455, 657, 776, 938, 1079, 1208
MspA1I CMGCKG 2 cut(s) 179, 191
MspI CCGG 2 cut(s) 769, 1091
MspR9I CCNGG 2 cut(s) 73, 969
MunI CAATTG 3 cut(s) 780, 1118, 1134
Mva1269I GAATGC 2 cut(s) 1100, 1415
MvaI CCWGG 2 cut(s) 73, 969
MwoI GCNNNNNNNGC 1 cut(s) 1255
NaeI GCCGGC 1 cut(s) 1092
NdeII GATC 4 cut(s) 18, 185, 500, 1372
NgoMIV GCCGGC 1 cut(s) 1090
NlaIII CATG 6 cut(s) 301, 590, 617, 755, 760, 1044
NmuCI GTSAC 1 cut(s) 1273
NspI RCATGY 2 cut(s) 760, 1044
PciI ACATGT 1 cut(s) 1040
PciSI GCTCTTC 2 cut(s) 210, 1317
PctI GAATGC 2 cut(s) 1100, 1415
PdiI GCCGGC 1 cut(s) 1092
PdmI GAANNNNTTC 1 cut(s) 1430
PfeI GAWTC 4 cut(s) 610, 1013, 1160, 1330
PkrI GCNGC 1 cut(s) 1472
PleI GAGTC 1 cut(s) 88
PpsI GAGTC 1 cut(s) 88
Ppu21I YACGTR 1 cut(s) 426
PscI ACATGT 1 cut(s) 1040
Psp124BI GAGCTC 1 cut(s) 1158
Psp6I CCWGG 2 cut(s) 71, 967
PspGI CCWGG 2 cut(s) 71, 967
PspPI GGNCC 1 cut(s) 1494
PstI CTGCAG 1 cut(s) 337
PsuI RGATCY 1 cut(s) 1372
PvuII CAGCTG 1 cut(s) 179
SacI GAGCTC 1 cut(s) 1158
SapI GCTCTTC 2 cut(s) 210, 1317
SaqAI TTAA 6 cut(s) 455, 657, 776, 938, 1079, 1208
SatI GCNGC 1 cut(s) 1471
Sau3AI GATC 4 cut(s) 18, 185, 500, 1372
Sau96I GGNCC 1 cut(s) 1494
SchI GAGTC 1 cut(s) 88
ScrFI CCNGG 2 cut(s) 73, 969
SduI GDGCHC 2 cut(s) 822, 1158
SfaNI GCATC 5 cut(s) 300, 632, 884, 1457, 1518
SfcI CTRYAG 2 cut(s) 333, 990
SmlI CTYRAG 5 cut(s) 244, 1232, 1343, 1376, 1457
SmoI CTYRAG 5 cut(s) 244, 1232, 1343, 1376, 1457
SsiI CCGC 6 cut(s) 16, 135, 191, 792, 907, 1140
SspI AATATT 1 cut(s) 1062
SspMI CTAG 8 cut(s) 143, 317, 356, 867, 872, 1010, 1028, 1271
SstI GAGCTC 1 cut(s) 1158
StyD4I CCNGG 2 cut(s) 71, 967
StyI CCWWGG 1 cut(s) 1398
TaiI ACGT 2 cut(s) 428, 1527
TaqI TCGA 4 cut(s) 499, 595, 1158, 1444
TaqII GACCGA 1 cut(s) 1496
TfiI GAWTC 4 cut(s) 610, 1013, 1160, 1330
Tru1I TTAA 6 cut(s) 455, 657, 776, 938, 1079, 1208
Tru9I TTAA 6 cut(s) 455, 657, 776, 938, 1079, 1208
TscAI CASTG 4 cut(s) 114, 337, 510, 1112
TseFI GTSAC 1 cut(s) 1273
TseI GCWGC 1 cut(s) 1470
Tsp45I GTSAC 1 cut(s) 1273
TspDTI ATGAA 5 cut(s) 17, 390, 575, 602, 689
TspRI CASTG 4 cut(s) 114, 337, 510, 1112
XagI CCTNNNNNAGG 1 cut(s) 1457
XapI RAATTY 1 cut(s) 1500
XbaI TCTAGA 2 cut(s) 1009, 1027
XceI RCATGY 2 cut(s) 760, 1044
XmiI GTMKAC 1 cut(s) 388
XmnI GAANNNNTTC 1 cut(s) 1430
XspI CTAG 8 cut(s) 143, 317, 356, 867, 872, 1010, 1028, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.