Rmu_sc0000480.1_g000005

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000480.1
Physical Location & Seq
Forward (+)
42541 .. 46869
4329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000480.1_g000005.1.cds

Sequence Viewer

Length: 4125 bp
atgtttgtactctctctccttgaatccgctgccggagaattggtgagtaaggtgacttcactcgctactgatcaattgagactcgatatcgtctgggggttccacaaagagataaaaaagctcaaagaatcctcaactctgattggagatataatccatgatgcttctcatgaacctgaagatcgggaactgcgggcaagggccagttggatgaagaggcttacaagcgtagcttataatgcagacgatattctggatgaaatagaatatgaagttcatcggatcgttataaaggagacaagcctggataagaagatactcggcttcttctgcaacaatcctgttgtatttcgtctcaagatggcacgcaagatttacaacatcaacacatccttggatgatctctacaagaaagcagctggcgtgggactcggcatgacaaggagatcaaatggaggtgcagcagcaagcaaagatcagcgggaaacaacctcattcgttgagaaaaatgaattcaccttcaaagatgcaatcattgttggaagggttgaggtggtgtcaaatataattgcaaccttgaccaactccaacaatcaagaaaagattctttcggtgatggccattgtgggattgggaggcctaggtaaaacaactttggctcgctcaattaccaagcaactgaaagaaggtgaaatggaaaaatactttgatgcaacattatgggtgtatgtatccaatacttttgatgtcaattcaatttcacatggaatggtgcaatcatgtggcgtgacgggaatagactcttcaaatcagcaagcattgatggaaagcctccagcagaagttgaaagagaaaaggtattttcttgtacttgatgacgtttggaatgagaatgctaacaattgggatgatttgaagcgttgtctgttgcaactaaattctgctaaaggaagctttgtgattgtcaccacccgtagtgccaaggtagcagcaatcatggaaacacttcctaggtgcgatctagggactctatcggatgatgaatgttggtccatattgaaggatagagcatttgcagatggtaatgctccgataccttcagaactagaggaaatcggaaggggcattgccaaaaagtgtgctggtcttccattgccggcaaaggttttgggtagcttgatgcgttctaagaacagtagtaaggaatggttgtcaattttggaaagtaaaatatggcaagtatcatcagacaaagaggatagcaggatcatgtcggttttgaggttgagttttgactttttggaatcaccattgaaacaatgttttgcatattgctccatgctggagaaaggttcctcaattaaaagagataacttgatccaactatggatggctcaaggttttctctatccttctcatgatcaccagagcaagcaagcgattgaaatggaggatataggcaataagtattttgatactctactggagaactccttgtttcaagatgctacaaaggatgaggatggcgttatcactcgatgcaagatgcacgatcttttgcatgattgtgcaatagaagtatccatgtgtgagagttggacaccagagttcgatcatgagatggatgatggtgcgattcgacatgtcgcacggattcctactcaaaagctagaaagtatgccaagaacaagtatttcaagactgcgatcactcttttcaaatggccctgtctctaataccattttccaaaagcttacaagtttacgtgtcttgagtttctttgggaattataagattcaggagttgccatattcacttggcaagctgaagcacttgaggtatctagatctttccgatacaaaaatcaaagcactcccaaagtctattggcaagctctataacctccaaacattgagattaccgatttatttcgaaaagtgtccaaagatgattcaaaatttgatcaatttgaggcatttttactttggtgaggaaatgaaatttgaggctgggattttggggcgattaactaatctccgaacattgcctttctttaatgtgggtgaggagagaggtcatgcaattaaggagttgggtgggctgaaccaactgagaggccacttaattatttataagctagaacatgtaagggatggagaagaagcaaagaaggctcgcttagtgcagaagagtcacttaagtgagttgacttttgactggtcactcaggccaattaataacaatgagacggatgtactagatggcttggaacctcatggtaacttgcaaagcttgaacatttaccgtttctcgggtgctagatttccgtcatggataacgagtctccaaaatttgaagaagattcggttatggagatgcgacaattttgaaggagtcccaacactcggtcacctgcctaatctaagatctcttgagattgaatggatggaaaagctgaaacgtgtgggagctgaggtttatggttatagtgatacactcggcacaactttatttccagctctgaaaacactatccatctctcggtgccaacagctcattgaatggatagaagcaccgaggatatcagctgaaggagaggtcgtgaaggtatttccttgtcttgagaagttgagcatagacaattgtcgcagcctagagtcgattcggatcacacagggcatgccgtctctccggaatttgaacatctctcagtgtaggggattatcaagcctagaggttgggctcgattactgcacctctcttcagcaattgaacatcttcaattgcggtaatctaatgacaattccaaccgcacaaggcatgccgtctctccggaaattgaatctcgtatggtgtaatggattgtcaagcctaggaagtgggctcagctactgcacctctcttcaggaattggagattgggtgttgtcgtaatctaacatcaattccaatcacacagggcatgccgtctctccggaaattgaatctcgtatggtgtaatggattgtcaagcctaggaagtgggctcagctactgcacctctcttcaggagttggagataaagaattgtgacaatctaacatcaattccaatcacacagggcatgccgtctctccggaaattgacgattgaatggtgtggggaaatatcaagcctaggaagtgggctcaactactgcacctctcttcaggaattggagataaaggattgtagtaatctaacatcaattccaatcacacaggacatgccatctctccagatattgaggatcttcttttgtgcgggattatcaagcctaggaggtgggctcaactactgcacctctcttcaggaattggagattgtgatttgtgataatctaacatcaattccaatcacacagggcatcacatctctccggatcgtgaggattgctggttgtcagagattattaagcctaccgagtgggctccaattctgcacctctcttgaggatctggatataactgattgctctagtctagtatccttgtcagtatcatatgtgaagtgcgaccacccggactcaacgaatcaaccggaggaggaaatttctcaaggtgttgatgcgtatttgtctttaccggaggattgccgtactgtagaatctattccacctaatctccgtcacttgttgatatgttactgtgggaaattaaaatatgtgcccacaggatttcaccacctcactcgtttgaagacgctccgaatgggtcccttctgggaggagctggacgccttccctgattttcagcttcctcctaattcacaacttgaagtgttagacttgacggggtggcctaagctcaagtttctgccccaacaaattcagcacttgacttgtttaaaacaactctggatattattttttaagggaccagaggctcttcctgagtggttgggaaatcttacatctcttgagtctctgaggatctggtcctgtaagaatctcaagtatctgcctacacaaaatgctatgaaaaacctcaccaaattgaagtacctctacattggcggatgtcccctgctcaaagaaggatgcaccaaggagactggcccagaatggcccaagatttctcacattccaaaagttctctttgacagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1374

Amino Acids

154.63

Weight (kDa)

6.71

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 237, 290, 1791, 2133
AarI CACCTGC 1 cut(s) 2421
Acc36I ACCTGC 1 cut(s) 2421
AccB1I GGYRCC 1 cut(s) 2544
AccIII TCCGGA 5 cut(s) 2691, 2832, 2973, 3114, 3396
AciI CCGC 7 cut(s) 27, 193, 481, 2787, 2811, 3281, 4032
AclWI GGATC 8 cut(s) 290, 1274, 1372, 2675, 3275, 3407, 3480, 3956
AcoI YGGCCR 1 cut(s) 618
AcsI RAATTY 8 cut(s) 512, 937, 1957, 2000, 2350, 2695, 3567, 3843
AcuI CTGAAG 9 cut(s) 198, 1083, 1847, 2610, 2747, 2888, 3029, 3170, 3311
AcyI GRCGYC 1 cut(s) 3753
AfaI GTAC 5 cut(s) 9, 870, 2256, 3616, 4019
AfiI CCNNNNNNNGG 3 cut(s) 2311, 2405, 2541
AflII CTTAAG 1 cut(s) 2197
AflIII ACRYGT 4 cut(s) 1642, 1765, 2143, 2461
AjnI CCWGG 1 cut(s) 303
AjuI GAANNNNNNNTTGG 2 cut(s) 2901, 2933
AleI CACNNNNGTG 1 cut(s) 2199
AlwI GGATC 8 cut(s) 290, 1274, 1372, 2675, 3275, 3407, 3480, 3956
AlwNI CAGNNNCTG 2 cut(s) 2892, 3033
Ama87I CYCGRG 1 cut(s) 2311
Aor13HI TCCGGA 5 cut(s) 2691, 2832, 2973, 3114, 3396
AoxI GGCC 9 cut(s) 201, 618, 637, 1723, 2116, 2228, 3815, 4072, 4082
ApeKI GCWGC 6 cut(s) 29, 416, 461, 464, 989, 2649
ApoI RAATTY 8 cut(s) 512, 937, 1957, 2000, 2350, 2695, 3567, 3843
AseI ATTAAT 1 cut(s) 2235
Asp700I GAANNNNTTC 4 cut(s) 603, 1005, 2777, 3627
AspA2I CCTAGG 6 cut(s) 640, 1010, 2872, 3013, 3154, 3295
AspS9I GGNCC 8 cut(s) 201, 1050, 1724, 3731, 3893, 3954, 4073, 4083
AsuC2I CCSGG 1 cut(s) 3539
AsuII TTCGAA 1 cut(s) 1932
AvaI CYCGRG 1 cut(s) 2311
AvaII GGWCC 4 cut(s) 1050, 3731, 3893, 3954
AvrII CCTAGG 6 cut(s) 640, 1010, 2872, 3013, 3154, 3295
BaeGI GKGCMC 1 cut(s) 3687
BalI TGGCCA 1 cut(s) 620
BanI GGYRCC 1 cut(s) 2544
BanII GRGCYC 6 cut(s) 2745, 2886, 3027, 3168, 3309, 3450
BarI GAAGNNNNNNTAC 4 cut(s) 40, 72, 4007, 4039
BbsI GAAGAC 2 cut(s) 1139, 3722
BbvCI CCTCAGC 1 cut(s) 2472
BbvI GCAGC 6 cut(s) 16, 428, 473, 476, 1001, 2661
BceAI ACGGC 5 cut(s) 2668, 2809, 2950, 3091, 3597
BciT130I CCWGG 1 cut(s) 305
BciVI GTATCC 3 cut(s) 742, 1591, 3514
BclI TGATCA 3 cut(s) 70, 1420, 1962
BcnI CCSGG 1 cut(s) 3539
BfmI CTRYAG 1 cut(s) 3618
BfrI CTTAAG 1 cut(s) 2197
BfuAI ACCTGC 1 cut(s) 2421
BfuI GTATCC 3 cut(s) 742, 1591, 3514
BglII AGATCT 2 cut(s) 1846, 2426
BisI GCNGC 6 cut(s) 30, 417, 462, 465, 990, 2650
BlnI CCTAGG 6 cut(s) 640, 1010, 2872, 3013, 3154, 3295
BlpI GCTNAGC 2 cut(s) 2885, 3026
BlsI GCNGC 6 cut(s) 31, 418, 463, 466, 991, 2651
Bme1390I CCNGG 2 cut(s) 305, 3539
Bme18I GGWCC 4 cut(s) 1050, 3731, 3893, 3954
BmeT110I CYCGRG 1 cut(s) 2311
BmgT120I GGNCC 8 cut(s) 201, 1050, 1724, 3731, 3893, 3954, 4073, 4083
BmiI GGNNCC 8 cut(s) 101, 1354, 2271, 2546, 3449, 3732, 3733, 3894
BmrFI CCNGG 2 cut(s) 305, 3539
BoxI GACNNNNGTC 1 cut(s) 2643
BpiI GAAGAC 2 cut(s) 1139, 3722
BplI GAGNNNNNCTC 2 cut(s) 3291, 3323
BpmI CTGGAG 4 cut(s) 818, 1364, 1505, 3239
Bpu10I CCTNAGC 2 cut(s) 2472, 3819
Bpu1102I GCTNAGC 2 cut(s) 2885, 3026
Bpu14I TTCGAA 1 cut(s) 1932
BpuMI CCSGG 1 cut(s) 3539
BsaAI YACGTR 1 cut(s) 1766
BsaBI GATNNNNATC 1 cut(s) 2666
BsaHI GRCGYC 1 cut(s) 3753
BsaWI WCCGGW 7 cut(s) 2691, 2832, 2973, 3114, 3396, 3556, 3601
Bsc4I CCNNNNNNNGG 3 cut(s) 2311, 2405, 2541
Bse118I RCCGGY 1 cut(s) 1156
Bse1I ACTGG 4 cut(s) 204, 1488, 2222, 4075
Bse3DI GCAATG 3 cut(s) 1125, 1151, 2042
Bse8I GATNNNNATC 1 cut(s) 2666
BseAI TCCGGA 5 cut(s) 2691, 2832, 2973, 3114, 3396
BseBI CCWGG 1 cut(s) 305
BseJI GATNNNNATC 1 cut(s) 2666
BseLI CCNNNNNNNGG 3 cut(s) 2311, 2405, 2541
BseMI GCAATG 3 cut(s) 1125, 1151, 2042
BseMII CTCAG 8 cut(s) 2102, 2239, 2463, 2723, 2899, 3040, 3900, 3935
BseNI ACTGG 4 cut(s) 204, 1488, 2222, 4075
BseRI GAGGAG 3 cut(s) 2081, 3575, 3758
BseSI GKGCMC 1 cut(s) 3687
BseXI GCAGC 6 cut(s) 16, 428, 473, 476, 1001, 2661
BseYI CCCAGC 1 cut(s) 2009
BsgI GTGCAG 8 cut(s) 480, 2204, 2737, 2878, 3019, 3160, 3301, 3442
BshFI GGCC 9 cut(s) 203, 620, 639, 1725, 2118, 2230, 3817, 4074, 4084
BshNI GGYRCC 1 cut(s) 2544
BsiHKCI CYCGRG 1 cut(s) 2311
BslFI GGGAC 6 cut(s) 441, 1039, 2381, 3717, 3906, 4023
BslI CCNNNNNNNGG 3 cut(s) 2311, 2405, 2541
BsmBI CGTCTC 6 cut(s) 359, 2240, 2691, 2832, 2973, 3114
BsmFI GGGAC 6 cut(s) 441, 1039, 2381, 3717, 3906, 4023
BsmI GAATGC 1 cut(s) 898
BsnI GGCC 9 cut(s) 203, 620, 639, 1725, 2118, 2230, 3817, 4074, 4084
BsoBI CYCGRG 1 cut(s) 2311
Bsp119I TTCGAA 1 cut(s) 1932
Bsp1286I GDGCHC 7 cut(s) 2745, 2886, 3027, 3168, 3309, 3450, 3687
Bsp13I TCCGGA 5 cut(s) 2691, 2832, 2973, 3114, 3396
Bsp1720I GCTNAGC 2 cut(s) 2885, 3026
BspACI CCGC 7 cut(s) 27, 193, 481, 2787, 2811, 3281, 4032
BspANI GGCC 9 cut(s) 203, 620, 639, 1725, 2118, 2230, 3817, 4074, 4084
BspCNI CTCAG 8 cut(s) 2103, 2238, 2464, 2722, 2898, 3039, 3901, 3936
BspEI TCCGGA 5 cut(s) 2691, 2832, 2973, 3114, 3396
BspHI TCATGA 3 cut(s) 169, 1417, 1615
BspLI GGNNCC 8 cut(s) 101, 1354, 2271, 2546, 3449, 3732, 3733, 3894
BspMI ACCTGC 1 cut(s) 2421
BspPI GGATC 8 cut(s) 290, 1274, 1372, 2675, 3275, 3407, 3480, 3956
BspQI GCTCTTC 1 cut(s) 3909
BspT104I TTCGAA 1 cut(s) 1932
BspT107I GGYRCC 1 cut(s) 2544
BspTI CTTAAG 1 cut(s) 2197
BsrDI GCAATG 3 cut(s) 1125, 1151, 2042
BsrFI RCCGGY 1 cut(s) 1156
BsrI ACTGG 4 cut(s) 204, 1488, 2222, 4075
BssAI RCCGGY 1 cut(s) 1156
BssNI GRCGYC 1 cut(s) 3753
BssT1I CCWWGG 9 cut(s) 393, 640, 981, 1010, 2872, 3013, 3154, 3295, 4062
Bst2UI CCWGG 1 cut(s) 305
Bst4CI ACNGT 5 cut(s) 1196, 2306, 3619, 3665, 4121
Bst6I CTCTTC 9 cut(s) 209, 808, 2183, 2766, 2907, 3048, 3189, 3330, 3909
BstACI GRCGYC 1 cut(s) 3753
BstAFI CTTAAG 1 cut(s) 2197
BstBAI YACGTR 1 cut(s) 1766
BstBI TTCGAA 1 cut(s) 1932
BstEII GGTNACC 1 cut(s) 2408
BstMWI GCNNNNNNNGC 4 cut(s) 239, 330, 986, 2171
BstNI CCWGG 1 cut(s) 305
BstNSI RCATGY 7 cut(s) 1646, 2147, 2683, 2824, 2965, 3106, 3247
BstPAI GACNNNNGTC 1 cut(s) 2643
BstPI GGTNACC 1 cut(s) 2408
BstSCI CCNGG 2 cut(s) 303, 3537
BstSFI CTRYAG 1 cut(s) 3618
BstSLI GKGCMC 1 cut(s) 3687
BstV1I GCAGC 6 cut(s) 16, 428, 473, 476, 1001, 2661
BstV2I GAAGAC 2 cut(s) 1139, 3722
BstX2I RGATCY 5 cut(s) 1846, 2426, 3267, 3472, 3948
BstYI RGATCY 5 cut(s) 1846, 2426, 3267, 3472, 3948
BsuI GTATCC 3 cut(s) 742, 1591, 3514
BsuRI GGCC 9 cut(s) 203, 620, 639, 1725, 2118, 2230, 3817, 4074, 4084
BtsIMutI CAGTG 1 cut(s) 2717
BveI ACCTGC 1 cut(s) 2421
CaiI CAGNNNCTG 2 cut(s) 2892, 3033
CciI TCATGA 3 cut(s) 169, 1417, 1615
Cfr10I RCCGGY 1 cut(s) 1156
Cfr13I GGNCC 8 cut(s) 201, 1050, 1724, 3731, 3893, 3954, 4073, 4083
CseI GACGC 2 cut(s) 3727, 3761
Csp6I GTAC 5 cut(s) 8, 869, 2255, 3615, 4018
CviQI GTAC 5 cut(s) 8, 869, 2255, 3615, 4018
DraI TTTAAA 1 cut(s) 3864
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 9 cut(s) 209, 808, 2183, 2766, 2907, 3048, 3189, 3330, 3909
EarI CTCTTC 9 cut(s) 209, 808, 2183, 2766, 2907, 3048, 3189, 3330, 3909
EciI GGCGGA 1 cut(s) 4047
Eco130I CCWWGG 9 cut(s) 393, 640, 981, 1010, 2872, 3013, 3154, 3295, 4062
Eco147I AGGCCT 1 cut(s) 639
Eco24I GRGCYC 6 cut(s) 2745, 2886, 3027, 3168, 3309, 3450
Eco32I GATATC 2 cut(s) 88, 2583
Eco47I GGWCC 4 cut(s) 1050, 3731, 3893, 3954
Eco57I CTGAAG 9 cut(s) 198, 1083, 1847, 2610, 2747, 2888, 3029, 3170, 3311
Eco88I CYCGRG 1 cut(s) 2311
Eco91I GGTNACC 1 cut(s) 2408
EcoO109I RGGNCCY 1 cut(s) 3731
EcoO65I GGTNACC 1 cut(s) 2408
EcoRI GAATTC 1 cut(s) 512
EcoRII CCWGG 1 cut(s) 303
EcoRV GATATC 2 cut(s) 88, 2583
EcoT14I CCWWGG 9 cut(s) 393, 640, 981, 1010, 2872, 3013, 3154, 3295, 4062
EcoT38I GRGCYC 6 cut(s) 2745, 2886, 3027, 3168, 3309, 3450
ErhI CCWWGG 9 cut(s) 393, 640, 981, 1010, 2872, 3013, 3154, 3295, 4062
Esp3I CGTCTC 6 cut(s) 359, 2240, 2691, 2832, 2973, 3114
FalI AAGNNNNNCTT 6 cut(s) 217, 249, 2162, 2194, 2180, 2212
FaqI GGGAC 6 cut(s) 441, 1039, 2381, 3717, 3906, 4023
FauI CCCGC 3 cut(s) 186, 474, 3274
FauNDI CATATG 1 cut(s) 3520
FbaI TGATCA 3 cut(s) 70, 1420, 1962
Fnu4HI GCNGC 6 cut(s) 30, 417, 462, 465, 990, 2650
FriOI GRGCYC 6 cut(s) 2745, 2886, 3027, 3168, 3309, 3450
Fsp4HI GCNGC 6 cut(s) 30, 417, 462, 465, 990, 2650
GluI GCNGC 6 cut(s) 30, 417, 462, 465, 990, 2650
GsaI CCCAGC 1 cut(s) 2013
GsuI CTGGAG 4 cut(s) 818, 1364, 1505, 3239
HaeIII GGCC 9 cut(s) 203, 620, 639, 1725, 2118, 2230, 3817, 4074, 4084
HgaI GACGC 2 cut(s) 3727, 3761
Hin1I GRCGYC 1 cut(s) 3753
HincII GTYRAC 1 cut(s) 2208
HindII GTYRAC 1 cut(s) 2208
HindIII AAGCTT 3 cut(s) 952, 1751, 2290
Hpy166II GTNNAC 2 cut(s) 1763, 2208
Hpy8I GTNNAC 2 cut(s) 1763, 2208
HpyCH4III ACNGT 5 cut(s) 1196, 2306, 3619, 3665, 4121
HpyCH4IV ACGT 3 cut(s) 879, 1765, 2461
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 330, 986, 2171
HpySE526I ACGT 3 cut(s) 879, 1765, 2461
Hsp92I GRCGYC 1 cut(s) 3753
KflI GGGWCCC 1 cut(s) 3731
Kpn2I TCCGGA 5 cut(s) 2691, 2832, 2973, 3114, 3396
KroI GCCGGC 1 cut(s) 1156
KroNI GCCGGC 1 cut(s) 1158
Ksp22I TGATCA 3 cut(s) 70, 1420, 1962
LguI GCTCTTC 1 cut(s) 3909
LmnI GCTCC 6 cut(s) 1093, 1340, 2468, 3453, 3726, 3745
Lsp1109I GCAGC 6 cut(s) 16, 428, 473, 476, 1001, 2661
MaeII ACGT 3 cut(s) 879, 1765, 2461
MfeI CAATTG 5 cut(s) 74, 901, 2641, 2768, 2782
MflI RGATCY 5 cut(s) 1846, 2426, 3267, 3472, 3948
MhlI GDGCHC 7 cut(s) 2745, 2886, 3027, 3168, 3309, 3450, 3687
MlsI TGGCCA 1 cut(s) 620
MluNI TGGCCA 1 cut(s) 620
MmeI TCCRAC 7 cut(s) 188, 520, 612, 1405, 1577, 2831, 3033
Mox20I TGGCCA 1 cut(s) 620
MroI TCCGGA 5 cut(s) 2691, 2832, 2973, 3114, 3396
MroNI GCCGGC 1 cut(s) 1156
MroXI GAANNNNTTC 4 cut(s) 603, 1005, 2777, 3627
MscI TGGCCA 1 cut(s) 620
MslI CAYNNNNRTG 2 cut(s) 1566, 2199
Msp20I TGGCCA 1 cut(s) 620
MspA1I CMGCKG 4 cut(s) 29, 419, 481, 2588
MspCI CTTAAG 1 cut(s) 2197
MspR9I CCNGG 2 cut(s) 305, 3539
MunI CAATTG 5 cut(s) 74, 901, 2641, 2768, 2782
Mva1269I GAATGC 1 cut(s) 898
MvaI CCWGG 1 cut(s) 305
MwoI GCNNNNNNNGC 4 cut(s) 239, 330, 986, 2171
NaeI GCCGGC 1 cut(s) 1158
NciI CCSGG 1 cut(s) 3539
NdeI CATATG 1 cut(s) 3520
NgoMIV GCCGGC 1 cut(s) 1156
NlaIV GGNNCC 8 cut(s) 101, 1354, 2271, 2546, 3449, 3732, 3733, 3894
NmeAIII GCCGAG 3 cut(s) 300, 411, 2478
NmuCI GTSAC 8 cut(s) 52, 787, 964, 2192, 2220, 2408, 3068, 3644
NspI RCATGY 7 cut(s) 1646, 2147, 2683, 2824, 2965, 3106, 3247
NspV TTCGAA 1 cut(s) 1932
OliI CACNNNNGTG 1 cut(s) 2199
PaeI GCATGC 4 cut(s) 2683, 2824, 2965, 3106
PagI TCATGA 3 cut(s) 169, 1417, 1615
PaqCI CACCTGC 1 cut(s) 2421
PceI AGGCCT 1 cut(s) 639
PciI ACATGT 2 cut(s) 1642, 2143
PciSI GCTCTTC 1 cut(s) 3909
PctI GAATGC 1 cut(s) 898
PdiI GCCGGC 1 cut(s) 1158
PdmI GAANNNNTTC 4 cut(s) 603, 1005, 2777, 3627
PkrI GCNGC 6 cut(s) 31, 418, 463, 466, 991, 2651
Ppu21I YACGTR 1 cut(s) 1766
PpuMI RGGWCCY 1 cut(s) 3731
PscI ACATGT 2 cut(s) 1642, 2143
PshAI GACNNNNGTC 1 cut(s) 2643
PshBI ATTAAT 1 cut(s) 2235
PsiI TTATAA 4 cut(s) 237, 290, 1791, 2133
Psp5II RGGWCCY 1 cut(s) 3731
Psp6I CCWGG 1 cut(s) 303
PspEI GGTNACC 1 cut(s) 2408
PspFI CCCAGC 1 cut(s) 2009
PspGI CCWGG 1 cut(s) 303
PspN4I GGNNCC 8 cut(s) 101, 1354, 2271, 2546, 3449, 3732, 3733, 3894
PspPI GGNCC 8 cut(s) 201, 1050, 1724, 3731, 3893, 3954, 4073, 4083
PspPPI RGGWCCY 1 cut(s) 3731
PstNI CAGNNNCTG 2 cut(s) 2892, 3033
PsuI RGATCY 5 cut(s) 1846, 2426, 3267, 3472, 3948
PvuII CAGCTG 2 cut(s) 419, 2588
RsaI GTAC 5 cut(s) 9, 870, 2256, 3616, 4019
RsaNI GTAC 5 cut(s) 8, 869, 2255, 3615, 4018
RseI CAYNNNNRTG 2 cut(s) 1566, 2199
SapI GCTCTTC 1 cut(s) 3909
SatI GCNGC 6 cut(s) 30, 417, 462, 465, 990, 2650
Sau96I GGNCC 8 cut(s) 201, 1050, 1724, 3731, 3893, 3954, 4073, 4083
ScrFI CCNGG 2 cut(s) 305, 3539
SduI GDGCHC 7 cut(s) 2745, 2886, 3027, 3168, 3309, 3450, 3687
SfcI CTRYAG 1 cut(s) 3618
SfuI TTCGAA 1 cut(s) 1932
SinI GGWCC 4 cut(s) 1050, 3731, 3893, 3954
SmiMI CAYNNNNRTG 2 cut(s) 1566, 2199
SphI GCATGC 4 cut(s) 2683, 2824, 2965, 3106
SseBI AGGCCT 1 cut(s) 639
SsiI CCGC 7 cut(s) 27, 193, 481, 2787, 2811, 3281, 4032
StuI AGGCCT 1 cut(s) 639
StyD4I CCNGG 2 cut(s) 303, 3537
StyI CCWWGG 9 cut(s) 393, 640, 981, 1010, 2872, 3013, 3154, 3295, 4062
TaaI ACNGT 5 cut(s) 1196, 2306, 3619, 3665, 4121
TaiI ACGT 3 cut(s) 882, 1768, 2464
TaqI TCGA 7 cut(s) 84, 1537, 1611, 1639, 1932, 2660, 2745
TaqII GACCGA 1 cut(s) 2396
TatI WGTACW 3 cut(s) 7, 868, 2254
TscAI CASTG 1 cut(s) 2717
TseFI GTSAC 8 cut(s) 52, 787, 964, 2192, 2220, 2408, 3068, 3644
TseI GCWGC 6 cut(s) 29, 416, 461, 464, 989, 2649
Tsp45I GTSAC 8 cut(s) 52, 787, 964, 2192, 2220, 2408, 3068, 3644
TspDTI ATGAA 9 cut(s) 186, 227, 266, 273, 285, 525, 1056, 2012, 4010
TspGWI ACGGA 4 cut(s) 1666, 2264, 2316, 3632
TspRI CASTG 1 cut(s) 2717
Vha464I CTTAAG 1 cut(s) 2197
VpaK11BI GGWCC 4 cut(s) 1050, 3731, 3893, 3954
VspI ATTAAT 1 cut(s) 2235
XapI RAATTY 8 cut(s) 512, 937, 1957, 2000, 2350, 2695, 3567, 3843
XbaI TCTAGA 1 cut(s) 1843
XceI RCATGY 7 cut(s) 1646, 2147, 2683, 2824, 2965, 3106, 3247
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XmaJI CCTAGG 6 cut(s) 640, 1010, 2872, 3013, 3154, 3295
XmnI GAANNNNTTC 4 cut(s) 603, 1005, 2777, 3627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.