Rmu_sc0004035.1_g000011

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004035.1
Physical Location & Seq
Reverse (-)
72517 .. 81610
9094 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004035.1_g000011.1.cds

Sequence Viewer

Length: 3180 bp
atggaaaaggatgacttagtccaactttggatggctcaaggatggcttcagcccaccaaaagtaatatggagatggaggatatagggagcaaatattttaacattttatcagaaaagtccctttttgaagacgttagagaggattctaatggtaatacaacatgcaagatgcacgatcttatacatgaccttgcagaacgagtgtcaaacatgacaaactgccgctcactattttccaaggaagaagcacttgggaacaccttgcctaactttagatctttgcgtgtgttaaatttatacaaggcagacattgacaagttgccgagttcaattggaaagttgacacacttgaggtatctgaatgttatgaaaacaagagtgaaggcatttccaaaatctattggtcaactttattaccttcagacgtttaaaatgccctatcatgttgaagagttcccaaagatgatagctaatatgatcaacttgagacatgtttattttggtatattgggaagattgactaatctcagatcattaccttctctgaaggtgggtaaggagactggacctagaattgaggaactgggtgggttaagccatttgagaggcaccttatctatctataatctggagcatgtaagagatggagaagaagcagtgaatgcaaagttagtggataagaaacatatacgcaatttaactctcgactggaagcttagtagaccaagcaacaatgttgacaatgaggatgatgtacttgaaggtctgcgaccacattgtaatttggaaattttgaagattcagggatttatgggtgttaagtttccatcatggttactgcttgccagcaacttgaacgaaattgaattagcagggtgcaacaaatgcgaaggagttccaatactgggccatcttccaaatctcatacatgttaagatgagtaacatgcagaacttaatgtgcttggggtctgagttttatggttacgatcagatttcaagtgcaacaacaagtgacaggagaaagaccttgtttcctgctttgagatcattacctattgagaatgccgagaatctgatagaatggatggaagcaggggaagtgatgctgacagcagaaaaattaagggtgtttccttaccttgaggagctgaccctggagcagtgtaagcaattgagaagtgctcccagtcattttccatctctcaagaagttggagatacgaggagtggaaagtggtatgcctatagcaagtattttaagcaataaactgactactctcactcatctctttgtacatgatgtcgagggacttactagtcttccggaagggacgttaagaaacaacaagaatcttgaatctctgtatatagaagactgtccagagtttagttgcattgccccccatggatttgactgctgcgcatctcttcagaaactgagtatttggaagtgtcctaagttgaggtatttatctgatgggccactcccactctctctcaaggagttgtccataacagattgctccattccaatcatccctgatgggctacaatactgcacatctcttcaagaattgcgtatatggagctgcccaaagataacgtccattccagcccaatactgcatatctcttcaacaactggacatatggaggtgcccaaagataacatccattccatctgcgggcctcccgtcccttggtcgactggtgcttatgcagtgtcctgaattatcaagcctaccgagtggactagggtgctgcacctctcttgttgatttgacggtaagagagtgccctatggtaacatccattccaattggcagtctcagtacaacccttcgagacttgtgtgtagataatccagagtctcttccaattttacacggcggcttcacatccctccgtcgattgagaatttcgggatgtcaaagtacacaaattgacctgcaattttgtcaaatcctcgtctctcttgaggagttgacaataggttattgtcctaatctagagactgttccaagtttagacaagctcacatccctccgtcagttgaacattgttggatgttcccgattgacatgtctacccagtgggttagcaatggcatccccgcatgtattcacccgtctcaattacttgcaaattggtcagttttggaatgagctggattcattcccggctcttcaggtcctaccacaacttgaatcattagggatctacgggtggccgaagctcaagtctctgcctgaacaaattcaacacttgacgtctttgacccatttgttgatatgggactttgatggactggaggctattccagaatggttgggaaaccttgcatctctcgactccttaaatattttggcttgcaagaatctgatgtatctaccttccgtccaagctatgcaacgcctcaccaaattagaggggctatacatcgacaattgtccccttttgagcgaaagatgcactgtggagagcggcccagagtggcctaagatttctcatattccagacatctatgaaccgtatggaagcgaaaacggtggtgaattggtagaagatgaagaggaggaaaaagagaatcatgctcaactgcttgctcttcctcctcatgcgtctgaagttttcattggtgcccttcctcaagatgcctcaaaaaaagcagcagcttctctaaacaacaaatccttcatcctcggcaagaagttcgtcaaagcttacattccaggaatcactgttgcaaattctgcccagacaaggaatgaatgtttaaaggagggagttggtgttctctggactggaattggacctaacattgcacgtaatgctatcattaatgctgctgaactagccagttatgatcaagtgaagcagacactcttgaaaattcccgggtttaacgacaatgttgttactcatctttttgctggtacatgggcaggtttctttgccatctgcattggctcaccagttgatgtgggacctttggccttttataagggcttcatcccaaattttggacggctaggatcttggaatgcgatcatgtttctaacccttgagcaggtacaaattttgacgccttccctttttatattcttcagccttttgagtgtctggtctgtgcgctggttttctatttttacgtcagtagcagtccgagctgcagcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1059

Amino Acids

118.22

Weight (kDa)

5.92

Isoelectric Point (pI)

50.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000029)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13530 FvH4_4g18270 FvH4_6g12200 FvH4_6g12460 FvH4_6g12461 FvH4_6g13450 FvH4_6g15090 FvH4_6g15220 FvH4_6g15230 FvH4_6g15250 FvH4_6g15251 FvH4_6g15340 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47050 FvH4_6g47980 FvH4_6g47980 FvH4_6g47980 FvH4_6g48170 FvH4_6g48310 FvH4_6g48310 FvH4_6g48850 FvH4_6g48881 FvH4_7g11830
malus_domestica MD02G1059900.v1.1 MD02G1069600.v1.1 MD02G1069700.v1.1 MD02G1070100.v1.1 MD02G1070200.v1.1 MD02G1070300.v1.1 MD02G1070800.v1.1 MD02G1070900.v1.1 MD02G1071200.v1.1 MD02G1071400.v1.1 MD02G1071900.v1.1 MD02G1075200.v1.1 MD03G1048000.v1.1 MD03G1049100.v1.1 MD03G1049200.v1.1 MD03G1052500.v1.1 MD03G1054100.v1.1 MD03G1054300.v1.1 MD03G1054400.v1.1 MD04G1113400.v1.1 MD04G1211100.v1.1 MD04G1211200.v1.1 MD05G1174900.v1.1 MD05G1175000.v1.1 MD05G1175900.v1.1 MD05G1243400.v1.1 MD07G1031500.v1.1 MD07G1031600.v1.1 MD07G1032500.v1.1 MD11G1046800.v1.1 MD11G1046900.v1.1 MD11G1047000.v1.1 MD11G1050400.v1.1 MD11G1050600.v1.1 MD11G1050800.v1.1 MD11G1051100.v1.1 MD11G1051600.v1.1 MD11G1051700.v1.1 MD11G1054600.v1.1 MD11G1055600.v1.1 MD11G1055700.v1.1 MD11G1055800.v1.1 MD11G1056000.v1.1 MD12G1126600.v1.1 MD12G1126700.v1.1 MD12G1126800.v1.1 MD12G1127300.v1.1 MD12G1127600.v1.1 MD12G1127900.v1.1 MD12G1128100.v1.1 MD12G1128300.v1.1 MD15G1261500.v1.1
prunus_persica Prupe.1G010700_v2.0.a1 Prupe.1G010800_v2.0.a1 Prupe.1G011000_v2.0.a1 Prupe.1G159600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163600_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163700_v2.0.a1 Prupe.1G163800_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G164000_v2.0.a1 Prupe.1G235500_v2.0.a1 Prupe.2G067400_v2.0.a1 Prupe.2G067500_v2.0.a1 Prupe.2G111700_v2.0.a1 Prupe.2G111800_v2.0.a1 Prupe.3G012000_v2.0.a1 Prupe.6G243400_v2.0.a1 Prupe.6G243500_v2.0.a1 Prupe.6G243600_v2.0.a1 Prupe.6G243700_v2.0.a1 Prupe.6G243800_v2.0.a1 Prupe.6G243900_v2.0.a1
pyrus_communis pycom02g04860 pycom02g04880 pycom02g04890 pycom02g05510 pycom02g05520 pycom02g05600 pycom02g05930 pycom02g06000 pycom02g06010 pycom03g03800 pycom03g03860 pycom03g03880 pycom03g03890 pycom03g03910 pycom03g03920 pycom03g04200 pycom03g04290 pycom03g04300 pycom03g04310 pycom03g04320 pycom03g09260 pycom04g10150 pycom04g10160 pycom04g10170 pycom05g16180 pycom05g16190 pycom05g16240 pycom05g21980 pycom05g21990 pycom07g02280 pycom11g03800 pycom11g03810 pycom11g04080 pycom11g04140 pycom11g04150 pycom11g04160 pycom11g04570 pycom11g04580 pycom11g04590 pycom11g04610 pycom12g12470 pycom12g12490 pycom13g22050
rosa_chinensis RchiOBHm_Chr1g0317761 RchiOBHm_Chr1g0317821 RchiOBHm_Chr1g0317831 RchiOBHm_Chr1g0317871 RchiOBHm_Chr1g0350501 RchiOBHm_Chr2g0107631 RchiOBHm_Chr3g0452091 RchiOBHm_Chr3g0464001 RchiOBHm_Chr3g0464281 RchiOBHm_Chr3g0466331 RchiOBHm_Chr3g0467341 RchiOBHm_Chr3g0467381 RchiOBHm_Chr3g0467731 RchiOBHm_Chr3g0468291 RchiOBHm_Chr3g0468321 RchiOBHm_Chr3g0468341 RchiOBHm_Chr3g0468391 RchiOBHm_Chr3g0468411 RchiOBHm_Chr3g0468571 RchiOBHm_Chr3g0468591 RchiOBHm_Chr3g0490721 RchiOBHm_Chr3g0490751 RchiOBHm_Chr3g0490761 RchiOBHm_Chr3g0490771 RchiOBHm_Chr3g0490951 RchiOBHm_Chr3g0491001 RchiOBHm_Chr3g0491011 RchiOBHm_Chr4g0412461 RchiOBHm_Chr4g0414161 RchiOBHm_Chr4g0414181 RchiOBHm_Chr4g0414191 RchiOBHm_Chr4g0414281 RchiOBHm_Chr4g0414441 RchiOBHm_Chr4g0414521 RchiOBHm_Chr4g0414531 RchiOBHm_Chr4g0417011 RchiOBHm_Chr4g0417021 RchiOBHm_Chr4g0417041 RchiOBHm_Chr4g0417071 RchiOBHm_Chr4g0417101 RchiOBHm_Chr4g0417531 RchiOBHm_Chr4g0417641 RchiOBHm_Chr4g0417651 RchiOBHm_Chr4g0417701 RchiOBHm_Chr4g0417731 RchiOBHm_Chr4g0417741 RchiOBHm_Chr4g0417781 RchiOBHm_Chr4g0418751 RchiOBHm_Chr4g0418791 RchiOBHm_Chr4g0418861 RchiOBHm_Chr4g0418881 RchiOBHm_Chr4g0418901 RchiOBHm_Chr4g0422451 RchiOBHm_Chr4g0422461 RchiOBHm_Chr4g0422471 RchiOBHm_Chr4g0422541 RchiOBHm_Chr4g0422561 RchiOBHm_Chr4g0422591 RchiOBHm_Chr4g0422651 RchiOBHm_Chr4g0422661 RchiOBHm_Chr5g0003251 RchiOBHm_Chr5g0003261 RchiOBHm_Chr5g0055871 RchiOBHm_Chr7g0204701 RchiOBHm_Chr7g0204741
rosa_laevigata RLG00000007607 RLG00000007932 RLG00000017606 RLG00000024418 RLG00000025629 RLG00000030586
rosa_multiflora Rmu_co7959167.1_g000001 Rmu_co8021330.1_g000001 Rmu_co8132128.1_g000001 Rmu_co8224744.1_g000001 Rmu_co8281865.1_g000001 Rmu_co8298487.1_g000001 Rmu_co8319035.1_g000001 Rmu_co8380035.1_g000001 Rmu_co8385371.1_g000001 Rmu_co8398173.1_g000001 Rmu_co8423363.1_g000001 Rmu_co8438275.1_g000001 Rmu_co8474729.1_g000001 Rmu_sc0000057.1_g000008 Rmu_sc0000350.1_g000023 Rmu_sc0000480.1_g000005 Rmu_sc0000654.1_g000021 Rmu_sc0000654.1_g000029 Rmu_sc0000654.1_g000032 Rmu_sc0000654.1_g000041 Rmu_sc0000654.1_g000045 Rmu_sc0000772.1_g000002 Rmu_sc0000772.1_g000041 Rmu_sc0000808.1_g000040 Rmu_sc0000830.1_g000062 Rmu_sc0000830.1_g000065 Rmu_sc0000830.1_g000072 Rmu_sc0000830.1_g000073 Rmu_sc0000935.1_g000020 Rmu_sc0000935.1_g000024 Rmu_sc0000935.1_g000026 Rmu_sc0000935.1_g000027 Rmu_sc0000935.1_g000031 Rmu_sc0000935.1_g000033 Rmu_sc0000962.1_g000033 Rmu_sc0000962.1_g000036 Rmu_sc0000962.1_g000063 Rmu_sc0000962.1_g000064 Rmu_sc0000962.1_g000065 Rmu_sc0001029.1_g000007 Rmu_sc0001063.1_g000014 Rmu_sc0001149.1_g000010 Rmu_sc0001149.1_g000011 Rmu_sc0001358.1_g000009 Rmu_sc0001448.1_g000003 Rmu_sc0001448.1_g000004 Rmu_sc0001729.1_g000005 Rmu_sc0001729.1_g000007 Rmu_sc0001729.1_g000020 Rmu_sc0001729.1_g000023 Rmu_sc0001793.1_g000015 Rmu_sc0002494.1_g000018 Rmu_sc0002494.1_g000019 Rmu_sc0002604.1_g000022 Rmu_sc0002922.1_g000011 Rmu_sc0003008.1_g000009 Rmu_sc0003221.1_g000061 Rmu_sc0003221.1_g000062 Rmu_sc0003459.1_g000014 Rmu_sc0003480.1_g000015 Rmu_sc0003541.1_g000016 Rmu_sc0003541.1_g000020 Rmu_sc0004035.1_g000001 Rmu_sc0004035.1_g000005 Rmu_sc0004035.1_g000011 Rmu_sc0004142.1_g000004 Rmu_sc0004142.1_g000010 Rmu_sc0004353.1_g000008 Rmu_sc0004616.1_g000009 Rmu_sc0004616.1_g000010 Rmu_sc0005231.1_g000004 Rmu_sc0006380.1_g000025 Rmu_sc0006492.1_g000010 Rmu_sc0006895.1_g000001 Rmu_sc0006895.1_g000002 Rmu_sc0006895.1_g000005 Rmu_sc0007034.1_g000004 Rmu_sc0007104.1_g000006 Rmu_sc0008990.1_g000003 Rmu_sc0008990.1_g000004 Rmu_sc0009106.1_g000003 Rmu_sc0009516.1_g000002 Rmu_sc0009516.1_g000003 Rmu_sc0009516.1_g000004 Rmu_sc0009516.1_g000005 Rmu_sc0009645.1_g000001 Rmu_sc0010274.1_g000001 Rmu_sc0010274.1_g000002 Rmu_sc0010419.1_g000003 Rmu_sc0010917.1_g000017 Rmu_sc0011213.1_g000001 Rmu_sc0011228.1_g000007 Rmu_sc0011538.1_g000011 Rmu_sc0011538.1_g000014 Rmu_sc0011538.1_g000015 Rmu_sc0012211.1_g000006 Rmu_sc0012351.1_g000003 Rmu_sc0012351.1_g000005 Rmu_sc0012915.1_g000002 Rmu_sc0013088.1_g000001 Rmu_sc0013459.1_g000001 Rmu_sc0013765.1_g000004 Rmu_sc0013765.1_g000005 Rmu_sc0014003.1_g000012 Rmu_sc0014003.1_g000014 Rmu_sc0014698.1_g000001 Rmu_sc0015740.1_g000001 Rmu_sc0016429.1_g000003 Rmu_sc0018885.1_g000001 Rmu_sc0020345.1_g000001 Rmu_sc0027791.1_g000001 Rmu_sc0037325.1_g000001 Rmu_ssc0000010.1_g000024 Rmu_ssc0000010.1_g000025 Rmu_ssc0000083.1_g000021 Rmu_ssc0000340.1_g000002 Rmu_ssc0000386.1_g000002 Rmu_ssc0000386.1_g000024 Rmu_ssc0000386.1_g000025 Rmu_ssc0000386.1_g000034 Rmu_ssc0000386.1_g000037 Rmu_ssc0000477.1_g000001
rosa_roxburghii Rroxscaffold_161G00448010 Rroxscaffold_164G00436080 Rroxscaffold_1G00024500 Rroxscaffold_2G00124290 Rroxscaffold_3G00222940 Rroxscaffold_3G00227440 Rroxscaffold_4G00304810 Rroxscaffold_4G00330180 Rroxscaffold_4G00330200 Rroxscaffold_5G00356620 Rroxscaffold_5G00358170 Rroxscaffold_5G00360880 Rroxscaffold_5G00361220 Rroxscaffold_5G00361950 Rroxscaffold_5G00361960 Rroxscaffold_5G00361990 Rroxscaffold_5G00362370 Rroxscaffold_5G00364540 Rroxscaffold_5G00364550 Rroxscaffold_5G00364580 Rroxscaffold_5G00364600 Rroxscaffold_6G00393290 Rroxscaffold_6G00412680 Rroxscaffold_6G00412790 Rroxscaffold_6G00413470 Rroxscaffold_6G00413720 Rroxscaffold_6G00416070 Rroxscaffold_7G00205400
rosa_rugosa Rorug01G0017300 Rorug01G0017400 Rorug01G0018000 Rorug01G0018100 Rorug01G0211500 Rorug02G0638200 Rorug03G0070000 Rorug03G0071200 Rorug03G0081000 Rorug03G0086500 Rorug03G0089300 Rorug03G0095300 Rorug03G0096000 Rorug03G0096000 Rorug04G0055000 Rorug04G0078300 Rorug04G0104100.1 Rorug04G0113800 Rorug04G0126700 Rorug04G0128000 Rorug04G0145900 Rorug04G0148700 Rorug04G0149100 Rorug04G0149100 Rorug04G0149200 Rorug04G0149300 Rorug04G0154900 Rorug04G0180400 Rorug04G0180500 Rorug04G0180700 Rorug04G0180800 Rorug04G0401500 Rorug04G0402100 Rorug05G0288600 Rorug05G0334100 Rorug07G0176400
rosa_samantha Rh1DG043200 Rh1DG043500 Rh1DG043900 Rh1DG222800 Rh3CG039900 Rh3CG156200 Rh3CG328500 Rh3CG328800 Rh3DG165000 Rh4AG208400 Rh4BG205600 Rh4BG213900 Rh4BG243900 Rh4CG198800 Rh4DG168600 Rh4DG180100 Rh4DG180300 Rh4DG180600 Rh4DG181200 Rh4DG181600 Rh4DG181700 Rh4DG183700 Rh4DG184000 Rh4DG184400 Rh4DG184700 Rh4DG206100 Rh4DG206200 Rh4DG206300 Rh4DG215600 Rh4DG238700 Rh4DG238900 Rh5DG390300
rosa_wichuraiana Rw0G005050 Rw0G009260 Rw0G009280 Rw0G015600 Rw0G023570 Rw1G002140 Rw1G002170 Rw1G002210 Rw1G002240 Rw1G019500 Rw2G015490 Rw3G003020 Rw3G010900 Rw3G012030 Rw3G012790 Rw3G013050 Rw3G013540 Rw3G013640 Rw3G013650 Rw3G026050 Rw3G026070 Rw4G015740 Rw4G015790 Rw4G015910 Rw4G015930 Rw4G015950 Rw4G017900 Rw4G017930 Rw4G018440 Rw4G018450 Rw4G018530 Rw4G020720 Rw4G020760 Rw5G019250 Rw5G034370 Rw7G018700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3003
AasI GACNNNNNNGTC 1 cut(s) 1317
AatII GACGTC 1 cut(s) 2273
Acc16I TGCGCA 1 cut(s) 1423
Acc36I ACCTGC 3 cut(s) 1956, 2936, 3061
AccB1I GGYRCC 3 cut(s) 608, 1656, 2639
AccB7I CCANNNNNTGG 1 cut(s) 3023
AccBSI CCGCTC 2 cut(s) 225, 2484
AccI GTMKAC 3 cut(s) 721, 1705, 2086
AccIII TCCGGA 1 cut(s) 1324
AciI CCGC 5 cut(s) 223, 1685, 1890, 2114, 2484
AclWI GGATC 2 cut(s) 2225, 3043
AcoI YGGCCR 1 cut(s) 2228
AcsI RAATTY 8 cut(s) 292, 789, 1917, 2256, 2749, 2892, 3019, 3078
AcuI CTGAAG 7 cut(s) 32, 404, 566, 1415, 2171, 2646, 3091
AcyI GRCGYC 2 cut(s) 2270, 3086
AfaI GTAC 6 cut(s) 756, 1296, 1834, 1936, 2938, 3075
AfiI CCNNNNNNNGG 6 cut(s) 905, 1685, 1700, 2763, 3023, 3070
AflIII ACRYGT 3 cut(s) 490, 928, 2081
AhlI ACTAGT 1 cut(s) 1316
AjnI CCWGG 2 cut(s) 1155, 2731
AjuI GAANNNNNNNTTGG 4 cut(s) 234, 266, 2619, 2651
AloI GAACNNNNNNTCC 2 cut(s) 2778, 2810
Alw21I GWGCWC 1 cut(s) 1186
Alw26I GTCTC 9 cut(s) 481, 554, 1832, 1839, 1875, 1975, 2006, 2135, 2247
AlwI GGATC 2 cut(s) 2225, 3043
AlwNI CAGNNNCTG 1 cut(s) 1438
Ama87I CYCGRG 1 cut(s) 2897
Aor13HI TCCGGA 1 cut(s) 1324
AoxI GGCC 7 cut(s) 907, 1481, 1687, 2228, 2485, 2495, 2994
ApeKI GCWGC 8 cut(s) 1419, 1590, 1761, 2669, 2672, 2846, 3170, 3173
ApoI RAATTY 8 cut(s) 292, 789, 1917, 2256, 2749, 2892, 3019, 3078
ArsI GACNNNNNNTTYG 4 cut(s) 1589, 1621, 2225, 2257
AseI ATTAAT 1 cut(s) 2841
Asp700I GAANNNNTTC 2 cut(s) 894, 2256
AspLEI GCGC 2 cut(s) 1424, 3135
AspS9I GGNCC 8 cut(s) 566, 907, 1481, 1687, 2191, 2486, 2813, 2987
AsuC2I CCSGG 3 cut(s) 2180, 2898, 2899
AsuHPI GGTGA 4 cut(s) 2116, 2410, 2564, 2964
AvaI CYCGRG 1 cut(s) 2897
AvaII GGWCC 4 cut(s) 566, 2191, 2813, 2987
BaeGI GKGCMC 3 cut(s) 1661, 1799, 2644
BanI GGYRCC 3 cut(s) 608, 1656, 2639
BbsI GAAGAC 3 cut(s) 135, 1313, 1380
Bbv12I GWGCWC 1 cut(s) 1186
BbvI GCAGC 7 cut(s) 1406, 1577, 1748, 2681, 2684, 2833, 3157
BceAI ACGGC 2 cut(s) 1903, 3044
BcgI CGANNNNNNTGC 2 cut(s) 2695, 2729
BciT130I CCWGG 2 cut(s) 1157, 2733
BclI TGATCA 2 cut(s) 477, 2866
BcnI CCSGG 3 cut(s) 2180, 2898, 2899
BcoDI GTCTC 9 cut(s) 481, 554, 1832, 1839, 1875, 1975, 2006, 2135, 2247
BcuI ACTAGT 1 cut(s) 1316
BfaI CTAG 6 cut(s) 570, 1317, 1754, 2009, 2855, 3032
BfmI CTRYAG 2 cut(s) 1245, 3171
BfuAI ACCTGC 3 cut(s) 1956, 2936, 3061
BglII AGATCT 1 cut(s) 275
Bme1390I CCNGG 5 cut(s) 1157, 2180, 2733, 2898, 2899
Bme18I GGWCC 4 cut(s) 566, 2191, 2813, 2987
BmeT110I CYCGRG 1 cut(s) 2897
BmgT120I GGNCC 8 cut(s) 566, 907, 1481, 1687, 2191, 2486, 2813, 2987
BmiI GGNNCC 4 cut(s) 610, 1658, 2641, 2988
BmrFI CCNGG 5 cut(s) 1157, 2180, 2733, 2898, 2899
BmrI ACTGGG 4 cut(s) 593, 914, 1182, 2085
BmsI GCATC 7 cut(s) 159, 1095, 1433, 2117, 2351, 2459, 2644
BmuI ACTGGG 4 cut(s) 593, 914, 1182, 2085
BoxI GACNNNNGTC 1 cut(s) 2448
BpiI GAAGAC 3 cut(s) 135, 1313, 1380
BplI GAGNNNNNCTC 2 cut(s) 1168, 1200
BpmI CTGGAG 3 cut(s) 650, 1178, 2330
BpuMI CCSGG 3 cut(s) 2180, 2898, 2899
BsaAI YACGTR 1 cut(s) 2828
BsaHI GRCGYC 2 cut(s) 2270, 3086
BsaJI CCNNGG 6 cut(s) 237, 1155, 1405, 1699, 2701, 2897
BsaWI WCCGGW 1 cut(s) 1324
BsaXI ACNNNNNCTCC 2 cut(s) 2778, 2808
Bsc4I CCNNNNNNNGG 6 cut(s) 905, 1685, 1700, 2763, 3023, 3070
Bse3DI GCAATG 3 cut(s) 1395, 2109, 2820
BseAI TCCGGA 1 cut(s) 1324
BseBI CCWGG 2 cut(s) 1157, 2733
BseDI CCNNGG 6 cut(s) 237, 1155, 1405, 1699, 2701, 2897
BseLI CCNNNNNNNGG 6 cut(s) 905, 1685, 1700, 2763, 3023, 3070
BseMI GCAATG 3 cut(s) 1395, 2109, 2820
BseMII CTCAG 4 cut(s) 541, 963, 1430, 1843
BseRI GAGGAG 5 cut(s) 1160, 1239, 1994, 2588, 2604
BseSI GKGCMC 3 cut(s) 1661, 1799, 2644
BseXI GCAGC 7 cut(s) 1406, 1577, 1748, 2681, 2684, 2833, 3157
BsgI GTGCAG 2 cut(s) 1543, 1747
BshFI GGCC 7 cut(s) 909, 1483, 1689, 2230, 2487, 2497, 2996
BshNI GGYRCC 3 cut(s) 608, 1656, 2639
BsiHKAI GWGCWC 1 cut(s) 1186
BsiHKCI CYCGRG 1 cut(s) 2897
BsiSI CCGG 3 cut(s) 1325, 2180, 2898
BslFI GGGAC 7 cut(s) 103, 1323, 1345, 1681, 2309, 2436, 3000
BslI CCNNNNNNNGG 6 cut(s) 905, 1685, 1700, 2763, 3023, 3070
BsmAI GTCTC 9 cut(s) 481, 554, 1832, 1839, 1875, 1975, 2006, 2135, 2247
BsmBI CGTCTC 2 cut(s) 1975, 2135
BsmFI GGGAC 7 cut(s) 103, 1323, 1345, 1681, 2309, 2436, 3000
BsmI GAATGC 3 cut(s) 667, 1069, 3049
BsnI GGCC 7 cut(s) 909, 1483, 1689, 2230, 2487, 2497, 2996
BsoBI CYCGRG 1 cut(s) 2897
Bsp1286I GDGCHC 4 cut(s) 1186, 1661, 1799, 2644
Bsp13I TCCGGA 1 cut(s) 1324
Bsp1407I TGTACA 1 cut(s) 1294
Bsp19I CCATGG 1 cut(s) 1405
BspACI CCGC 5 cut(s) 223, 1685, 1890, 2114, 2484
BspANI GGCC 7 cut(s) 909, 1483, 1689, 2230, 2487, 2497, 2996
BspCNI CTCAG 4 cut(s) 540, 964, 1431, 1842
BspEI TCCGGA 1 cut(s) 1324
BspLI GGNNCC 4 cut(s) 610, 1658, 2641, 2988
BspMAI CTGCAG 1 cut(s) 3175
BspMI ACCTGC 3 cut(s) 1956, 2936, 3061
BspPI GGATC 2 cut(s) 2225, 3043
BspQI GCTCTTC 2 cut(s) 2190, 2613
BspT107I GGYRCC 3 cut(s) 608, 1656, 2639
BsrBI CCGCTC 2 cut(s) 225, 2484
BsrDI GCAATG 3 cut(s) 1395, 2109, 2820
BsrGI TGTACA 1 cut(s) 1294
BssECI CCNNGG 6 cut(s) 237, 1155, 1405, 1699, 2701, 2897
BssNI GRCGYC 2 cut(s) 2270, 3086
BssT1I CCWWGG 3 cut(s) 237, 1405, 1699
Bst2UI CCWGG 2 cut(s) 1157, 2733
Bst4CI ACNGT 7 cut(s) 1379, 1786, 2017, 2476, 2532, 2549, 2743
Bst6I CTCTTC 8 cut(s) 444, 1434, 1572, 1638, 1878, 2190, 2565, 2613
BstACI GRCGYC 2 cut(s) 2270, 3086
BstAPI GCANNNNNTGC 4 cut(s) 662, 885, 2753, 2831
BstAUI TGTACA 1 cut(s) 1294
BstBAI YACGTR 1 cut(s) 2828
BstC8I GCNNGC 5 cut(s) 843, 847, 1687, 2371, 2604
BstDEI CTNAG 9 cut(s) 16, 527, 716, 972, 1439, 1458, 1829, 2499, 3177
BstDSI CCRYGG 1 cut(s) 1405
BstENI CCTNNNNNAGG 1 cut(s) 3068
BstHHI GCGC 2 cut(s) 1424, 3135
BstMAI GTCTC 9 cut(s) 481, 554, 1832, 1839, 1875, 1975, 2006, 2135, 2247
BstMWI GCNNNNNNNGC 8 cut(s) 662, 885, 1168, 2469, 2753, 2831, 2855, 3167
BstNI CCWGG 2 cut(s) 1157, 2733
BstNSI RCATGY 7 cut(s) 165, 494, 638, 932, 949, 2085, 2120
BstPAI GACNNNNGTC 1 cut(s) 2448
BstSCI CCNGG 5 cut(s) 1155, 2178, 2731, 2896, 2897
BstSFI CTRYAG 2 cut(s) 1245, 3171
BstSLI GKGCMC 3 cut(s) 1661, 1799, 2644
BstV1I GCAGC 7 cut(s) 1406, 1577, 1748, 2681, 2684, 2833, 3157
BstV2I GAAGAC 3 cut(s) 135, 1313, 1380
BstX2I RGATCY 3 cut(s) 275, 2217, 3035
BstYI RGATCY 3 cut(s) 275, 2217, 3035
BsuRI GGCC 7 cut(s) 909, 1483, 1689, 2230, 2487, 2497, 2996
BtgI CCRYGG 1 cut(s) 1405
BtsI GCAGTG 3 cut(s) 663, 1169, 1727
BtsIMutI CAGTG 6 cut(s) 663, 1169, 1727, 2098, 2472, 2739
BveI ACCTGC 3 cut(s) 1956, 2936, 3061
Cac8I GCNNGC 5 cut(s) 843, 847, 1687, 2371, 2604
CaiI CAGNNNCTG 1 cut(s) 1438
CfoI GCGC 2 cut(s) 1424, 3135
Cfr13I GGNCC 8 cut(s) 566, 907, 1481, 1687, 2191, 2486, 2813, 2987
Cfr9I CCCGGG 1 cut(s) 2897
CseI GACGC 2 cut(s) 2610, 3094
Csp6I GTAC 6 cut(s) 755, 1295, 1833, 1935, 2937, 3074
CspCI CAANNNNNGTGG 2 cut(s) 654, 689
CviQI GTAC 6 cut(s) 755, 1295, 1833, 1935, 2937, 3074
DdeI CTNAG 9 cut(s) 16, 527, 716, 972, 1439, 1458, 1829, 2499, 3177
DraI TTTAAA 2 cut(s) 430, 2778
DrdI GACNNNNNNGTC 1 cut(s) 1317
DseDI GACNNNNNNGTC 1 cut(s) 1317
EaeI YGGCCR 1 cut(s) 2228
Eam1104I CTCTTC 8 cut(s) 444, 1434, 1572, 1638, 1878, 2190, 2565, 2613
EarI CTCTTC 8 cut(s) 444, 1434, 1572, 1638, 1878, 2190, 2565, 2613
Eco130I CCWWGG 3 cut(s) 237, 1405, 1699
Eco47I GGWCC 4 cut(s) 566, 2191, 2813, 2987
Eco57I CTGAAG 7 cut(s) 32, 404, 566, 1415, 2171, 2646, 3091
Eco88I CYCGRG 1 cut(s) 2897
EcoNI CCTNNNNNAGG 1 cut(s) 3068
EcoO109I RGGNCCY 2 cut(s) 2191, 2987
EcoRII CCWGG 2 cut(s) 1155, 2731
EcoT14I CCWWGG 3 cut(s) 237, 1405, 1699
ErhI CCWWGG 3 cut(s) 237, 1405, 1699
Esp3I CGTCTC 2 cut(s) 1975, 2135
FalI AAGNNNNNCTT 5 cut(s) 31, 30, 62, 234, 266
FaqI GGGAC 7 cut(s) 103, 1323, 1345, 1681, 2309, 2436, 3000
FauI CCCGC 2 cut(s) 1678, 2121
FauNDI CATATG 1 cut(s) 1649
FbaI TGATCA 2 cut(s) 477, 2866
FblI GTMKAC 3 cut(s) 721, 1705, 2086
FspBI CTAG 6 cut(s) 570, 1317, 1754, 2009, 2855, 3032
FspI TGCGCA 1 cut(s) 1423
GlaI GCGC 2 cut(s) 1423, 3134
GsuI CTGGAG 3 cut(s) 650, 1178, 2330
HaeIII GGCC 7 cut(s) 909, 1483, 1689, 2230, 2487, 2497, 2996
HapII CCGG 3 cut(s) 1325, 2180, 2898
HgaI GACGC 2 cut(s) 2610, 3094
HhaI GCGC 2 cut(s) 1424, 3135
Hin1I GRCGYC 2 cut(s) 2270, 3086
Hin6I GCGC 2 cut(s) 1422, 3133
HinP1I GCGC 2 cut(s) 1422, 3133
HincII GTYRAC 5 cut(s) 342, 407, 739, 1706, 1986
HindII GTYRAC 5 cut(s) 342, 407, 739, 1706, 1986
HindIII AAGCTT 2 cut(s) 713, 2721
HpaII CCGG 3 cut(s) 1325, 2180, 2898
HphI GGTGA 4 cut(s) 2116, 2410, 2564, 2964
Hpy166II GTNNAC 9 cut(s) 342, 407, 722, 739, 1706, 1751, 1937, 1986, 2087
Hpy8I GTNNAC 9 cut(s) 342, 407, 722, 739, 1706, 1751, 1937, 1986, 2087
Hpy99I CGWCG 1 cut(s) 1911
HpyCH4III ACNGT 7 cut(s) 1379, 1786, 2017, 2476, 2532, 2549, 2743
HpyCH4IV ACGT 7 cut(s) 132, 425, 1334, 1604, 2270, 2827, 3152
HpyF10VI GCNNNNNNNGC 8 cut(s) 662, 885, 1168, 2469, 2753, 2831, 2855, 3167
HpyF3I CTNAG 9 cut(s) 16, 527, 716, 972, 1439, 1458, 1829, 2499, 3177
HpySE526I ACGT 7 cut(s) 132, 425, 1334, 1604, 2270, 2827, 3152
Hsp92I GRCGYC 2 cut(s) 2270, 3086
HspAI GCGC 2 cut(s) 1422, 3133
Kpn2I TCCGGA 1 cut(s) 1324
Ksp22I TGATCA 2 cut(s) 477, 2866
LguI GCTCTTC 2 cut(s) 2190, 2613
LmnI GCTCC 7 cut(s) 87, 631, 1147, 1159, 1189, 1529, 1587
Lsp1109I GCAGC 7 cut(s) 1406, 1577, 1748, 2681, 2684, 2833, 3157
LweI GCATC 7 cut(s) 159, 1095, 1433, 2117, 2351, 2459, 2644
MaeI CTAG 6 cut(s) 570, 1317, 1754, 2009, 2855, 3032
MaeII ACGT 7 cut(s) 132, 425, 1334, 1604, 2270, 2827, 3152
MaeIII GTNAC 6 cut(s) 834, 941, 983, 1013, 1804, 2917
MbiI CCGCTC 2 cut(s) 225, 2484
MfeI CAATTG 4 cut(s) 330, 1172, 1818, 2446
MflI RGATCY 3 cut(s) 275, 2217, 3035
MhlI GDGCHC 4 cut(s) 1186, 1661, 1799, 2644
MlyI GAGTC 2 cut(s) 1877, 2345
MmeI TCCRAC 3 cut(s) 46, 1194, 2044
MroI TCCGGA 1 cut(s) 1324
MroXI GAANNNNTTC 2 cut(s) 894, 2256
MspI CCGG 3 cut(s) 1325, 2180, 2898
MspR9I CCNGG 5 cut(s) 1157, 2180, 2733, 2898, 2899
MunI CAATTG 4 cut(s) 330, 1172, 1818, 2446
Mva1269I GAATGC 3 cut(s) 667, 1069, 3049
MvaI CCWGG 2 cut(s) 1157, 2733
MwoI GCNNNNNNNGC 8 cut(s) 662, 885, 1168, 2469, 2753, 2831, 2855, 3167
NciI CCSGG 3 cut(s) 2180, 2898, 2899
NcoI CCATGG 1 cut(s) 1405
NdeI CATATG 1 cut(s) 1649
NlaIV GGNNCC 4 cut(s) 610, 1658, 2641, 2988
NmeAIII GCCGAG 3 cut(s) 348, 1093, 2682
NmuCI GTSAC 1 cut(s) 1013
NsbI TGCGCA 1 cut(s) 1423
NspI RCATGY 7 cut(s) 165, 494, 638, 932, 949, 2085, 2120
PciI ACATGT 3 cut(s) 490, 928, 2081
PciSI GCTCTTC 2 cut(s) 2190, 2613
PctI GAATGC 3 cut(s) 667, 1069, 3049
PdmI GAANNNNTTC 2 cut(s) 894, 2256
PflFI GACNNNGTC 1 cut(s) 17
PflMI CCANNNNNTGG 1 cut(s) 3023
PfoI TCCNGGA 1 cut(s) 2731
PleI GAGTC 2 cut(s) 1876, 2345
PpsI GAGTC 2 cut(s) 1876, 2345
Ppu21I YACGTR 1 cut(s) 2828
PpuMI RGGWCCY 2 cut(s) 2191, 2987
PscI ACATGT 3 cut(s) 490, 928, 2081
PshAI GACNNNNGTC 1 cut(s) 2448
PshBI ATTAAT 1 cut(s) 2841
PsiI TTATAA 1 cut(s) 3003
Psp5II RGGWCCY 2 cut(s) 2191, 2987
Psp6I CCWGG 2 cut(s) 1155, 2731
PspGI CCWGG 2 cut(s) 1155, 2731
PspN4I GGNNCC 4 cut(s) 610, 1658, 2641, 2988
PspPI GGNCC 8 cut(s) 566, 907, 1481, 1687, 2191, 2486, 2813, 2987
PspPPI RGGWCCY 2 cut(s) 2191, 2987
PstI CTGCAG 1 cut(s) 3175
PstNI CAGNNNCTG 1 cut(s) 1438
PsuI RGATCY 3 cut(s) 275, 2217, 3035
PsyI GACNNNGTC 1 cut(s) 17
RsaI GTAC 6 cut(s) 756, 1296, 1834, 1936, 2938, 3075
RsaNI GTAC 6 cut(s) 755, 1295, 1833, 1935, 2937, 3074
SalI GTCGAC 1 cut(s) 1704
SapI GCTCTTC 2 cut(s) 2190, 2613
Sau96I GGNCC 8 cut(s) 566, 907, 1481, 1687, 2191, 2486, 2813, 2987
SchI GAGTC 2 cut(s) 1877, 2345
ScrFI CCNGG 5 cut(s) 1157, 2180, 2733, 2898, 2899
SduI GDGCHC 4 cut(s) 1186, 1661, 1799, 2644
SfaNI GCATC 7 cut(s) 159, 1095, 1433, 2117, 2351, 2459, 2644
SfcI CTRYAG 2 cut(s) 1245, 3171
SinI GGWCC 4 cut(s) 566, 2191, 2813, 2987
SmaI CCCGGG 1 cut(s) 2899
SpeI ACTAGT 1 cut(s) 1316
SsiI CCGC 5 cut(s) 223, 1685, 1890, 2114, 2484
SspI AATATT 2 cut(s) 95, 2362
SspMI CTAG 6 cut(s) 570, 1317, 1754, 2009, 2855, 3032
StyD4I CCNGG 5 cut(s) 1155, 2178, 2731, 2896, 2897
StyI CCWWGG 3 cut(s) 237, 1405, 1699
TaaI ACNGT 7 cut(s) 1379, 1786, 2017, 2476, 2532, 2549, 2743
TaiI ACGT 7 cut(s) 135, 428, 1337, 1607, 2273, 2830, 3155
TaqI TCGA 7 cut(s) 705, 1305, 1705, 1843, 1909, 2349, 2442
TatI WGTACW 4 cut(s) 754, 1294, 1832, 1934
TauI GCSGC 3 cut(s) 225, 1893, 2487
TscAI CASTG 6 cut(s) 663, 1169, 1727, 2098, 2479, 2746
TseFI GTSAC 1 cut(s) 1013
TseI GCWGC 8 cut(s) 1419, 1590, 1761, 2669, 2672, 2846, 3170, 3173
Tsp45I GTSAC 1 cut(s) 1013
TspDTI ATGAA 8 cut(s) 383, 2163, 2541, 2583, 2623, 2686, 2784, 3001
TspGWI ACGGA 3 cut(s) 1895, 2036, 2386
TspMI CCCGGG 1 cut(s) 2897
TspRI CASTG 6 cut(s) 663, 1169, 1727, 2098, 2479, 2746
Tth111I GACNNNGTC 1 cut(s) 17
Van91I CCANNNNNTGG 1 cut(s) 3023
VpaK11BI GGWCC 4 cut(s) 566, 2191, 2813, 2987
VspI ATTAAT 1 cut(s) 2841
XagI CCTNNNNNAGG 1 cut(s) 3068
XapI RAATTY 8 cut(s) 292, 789, 1917, 2256, 2749, 2892, 3019, 3078
XbaI TCTAGA 1 cut(s) 2008
XceI RCATGY 7 cut(s) 165, 494, 638, 932, 949, 2085, 2120
XcmI CCANNNNNNNNNTGG 1 cut(s) 64
XmaI CCCGGG 1 cut(s) 2897
XmiI GTMKAC 3 cut(s) 721, 1705, 2086
XmnI GAANNNNTTC 2 cut(s) 894, 2256
XspI CTAG 6 cut(s) 570, 1317, 1754, 2009, 2855, 3032
ZraI GACGTC 1 cut(s) 2271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.