Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0014411

Physical Location & Seq

Genomic Coordinates Reverse (-)

19015843 .. 19017602

Gene Structure 1760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGTGCCAAATTTCAAAAACCAAAGCCATCCGATCCCTATTGCAAGGATGCAACAGCCTCAAACGGCTCAAAAAAATCCACGCCCACGTCATCACCAACGGTCTTCAACCGGATCCCGCCATTTCAAACAAGCTGCTCAACTTCTGCGCCGTCTCCGTCTCCGGCAGCTTGGCCTACGCGCAGCTGCTCTTCTATCATCACCTCCTAAACCCACAAACCCAGGATTGGAATTCCCTCATCAGAGGCTTCTCCAACAGCCCTTCTCCTCACCACGCCATTTTTTACTACAATCGCATGCTTTCGTCTGGTTCCTATTCTCCTCCTGATACATTCACTTTCTCCTTCGTGCTCAAGGCCTGCGAGAAGTTGAAGGCCCGGAAGAAGTGTGAAGAGGTTCATGGAGCTGTGGTGAGATATGGGTACGAAAAGGACGTCGTTGTTTGCACCAATCTTATGAGATCCTATGCGGGAGATGGGTTGATTGAGAGTGCAGAGAAGGTGTTTGATAATATGTCTGAGAGAGACTTGGTGTCTTGGAATTCTATGATTTCGTGCTACTCTCAGAAGGGTCTTGATGCGTTTACGATTGTTGGGTTGCTTTCATCTTGTGCTCACTTGGGCGCACTGAATATCGGAGTTCAGATGCATAGAATTGCTAGTGAAAAGGGGCTTGTGGAGAATGTTTATGTTGGGAATGCGCTTATTGATATGTATGCTAAATGTGGTAACTTGGATAGTGCTCTTTGCGTCTTTGAGAGGATGAGGAAGAAAGATGTTTTTACTTGGAACTCCATGATTGTTGGGTATGGAGTACATGGTGATGGAGAAGAAGCAATCTCATTTTTCGGGCGGATGTTGGTCGAAGGAGTCCAGCCAAACTCCATCACATTTCTTGGTTTGTTATGTGGATGCAGTCACCAAGGTTTGGTTGACAAGGGTGTCGAGTACTTCAATGTGATGAGCTCCAAGTTCAGTGTCAAGCCTGGAATTAAGCATTATGGGTGCCTGGTGGATCTGTTTGGCAGAGCTGGGATGCTCGAAAAGGCGCTTCAATTTATTGGGACTTCGCGTGCCCAGGAGGATCCGGTCCTTTGGCGGACTCTGCTTGGCTCTTGCAAGATTCATAAAAATGTAGAAATAGGAGAAATTGCCATGAGGAATCTAATCCAGCTAGGGTCAGCTAATGCAGGGGACTATGTGCTTCTTGCTTCGATTTATTCTACAGAGAAAAATGCAGATGGTGTTGCAAAGATGAGAAAATTGATCAAAACTGAGGGAGTAAAGACCACTCCTGGTTGGAGCTGGATTGAAATTGGTGATCAGGTTCACAAATTTGTCGTGGACGACAAGTCACATCCAGATGCTAATGAAATTTACCAAAAATTGAGGAAAATAGTTCATCGAGCTGCTCTGCATGGTTACGTGCAGGAGGATTCCCTCATGACAGCGTCTGAACTTACTTCCACAGACACAGATTGTTTGGGAACTTCCGGTTCATGTCACAGCGAGAAGCTGGCAATTGCTTTTGGCCTAGCAAGAACTCCAGAAGGAACGCCTTTACGAATAGTAAAGAACCTGAGAGTCTGCAGAGATTGTCATTCGTTTACAAAGTTTGTTTCACAAGCTTTCGATCGGGAAATAATTGTTAGGGATCGTGTTCGGTTTCATCACTTCAAGGGTGGATTGTGTTCATGTAAAGACTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

570

Amino Acids

63.25

Weight (kDa)

8.74

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	232 - 258	9.2e-06	PPR repeat
PPR_2	PF13041	257 - 305	2.1e-11	PPR repeat family
PPR	PF01535	260 - 290	6e-08	PPR repeat
E_motif	PF20431	375 - 437	1.3e-16	E motif
Eplus_motif	PF20430	442 - 468	5e-09	E+ motif
DYW_deaminase	PF14432	500 - 569	5.9e-34	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56550 AT3G56550
fragaria_vesca	FvH4_6g08690
malus_domestica	MD04G1184300.v1.1 MD12G1197500.v1.1
prunus_persica	Prupe.6G302800_v2.0.a1
pyrus_communis	pycom04g16330 pycom12g18380
rosa_chinensis	RchiOBHm_Chr3g0458831
rosa_laevigata	RLG00000025132
rosa_multiflora	Rmu_co8385739.1_g000001
rosa_roxburghii	Rroxscaffold_6G00420760
rosa_rugosa	Rorug03G0032200
rosa_samantha	Rh3BG092700 Rh3CG093000 Rh3DG093700
rosa_wichuraiana	Rw3G007690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	938
AatII	GACGTC	1 cut(s)	435
AccB1I	GGYRCC	1 cut(s)	1002
AccB7I	CCANNNNNTGG	1 cut(s)	925
AccII	CGCG	2 cut(s)	179, 1069
AciI	CCGC	4 cut(s)	117, 467, 850, 1096
AclWI	GGATC	8 cut(s)	27, 107, 120, 453, 1020, 1076, 1089, 1659
AcsI	RAATTY	5 cut(s)	9, 229, 538, 1331, 1371
AcyI	GRCGYC	1 cut(s)	432
AfaI	GTAC	3 cut(s)	422, 813, 947
AfiI	CCNNNNNNNGG	2 cut(s)	225, 925
AgsI	TTSAA	8 cut(s)	15, 107, 126, 370, 952, 1052, 1310, 1675
AhdI	GACNNNNNGTC	2 cut(s)	529, 1348
AjiI	CACGTC	1 cut(s)	88
AjnI	CCWGG	5 cut(s)	219, 982, 1005, 1074, 1291
Alw21I	GWGCWC	4 cut(s)	351, 613, 742, 965
Alw26I	GTCTC	3 cut(s)	157, 163, 516
AlwI	GGATC	8 cut(s)	27, 107, 120, 453, 1020, 1076, 1089, 1659
AlwNI	CAGNNNCTG	1 cut(s)	1451
AoxI	GGCC	4 cut(s)	171, 354, 372, 1528
ApeKI	GCWGC	5 cut(s)	133, 165, 181, 184, 1406
ApoI	RAATTY	5 cut(s)	9, 229, 538, 1331, 1371
ArsI	GACNNNNNNTTYG	2 cut(s)	417, 449
Asp700I	GAANNNNTTC	1 cut(s)	393
AspLEI	GCGC	5 cut(s)	149, 181, 623, 700, 1048
AspS9I	GGNCC	2 cut(s)	373, 1087
AsuC2I	CCSGG	1 cut(s)	376
AsuHPI	GGTGA	7 cut(s)	85, 191, 260, 421, 830, 908, 1328
AvaII	GGWCC	1 cut(s)	1087
BaeGI	GKGCMC	1 cut(s)	1075
BamHI	GGATCC	2 cut(s)	112, 1081
BanI	GGYRCC	1 cut(s)	1002
BanII	GRGCYC	1 cut(s)	965
BbsI	GAAGAC	1 cut(s)	95
Bbv12I	GWGCWC	4 cut(s)	351, 613, 742, 965
BbvI	GCAGC	5 cut(s)	120, 171, 177, 193, 1393
BccI	CCATC	5 cut(s)	35, 467, 815, 890, 1232
BceAI	ACGGC	2 cut(s)	80, 134
BciT130I	CCWGG	5 cut(s)	221, 984, 1007, 1076, 1293
BclI	TGATCA	2 cut(s)	1263, 1318
BcnI	CCSGG	1 cut(s)	376
BcoDI	GTCTC	3 cut(s)	157, 163, 516
BfaI	CTAG	3 cut(s)	657, 1172, 1532
BfmI	CTRYAG	2 cut(s)	1221, 1585
BfoI	RGCGCY	1 cut(s)	1049
BisI	GCNGC	5 cut(s)	134, 166, 182, 185, 1407
BlsI	GCNGC	5 cut(s)	135, 167, 183, 186, 1408
BmcAI	AGTACT	1 cut(s)	947
Bme1390I	CCNGG	6 cut(s)	221, 376, 984, 1007, 1076, 1293
Bme18I	GGWCC	1 cut(s)	1087
BmeRI	GACNNNNNGTC	2 cut(s)	529, 1348
BmgBI	CACGTC	1 cut(s)	88
BmgT120I	GGNCC	2 cut(s)	373, 1087
BmiI	GGNNCC	4 cut(s)	114, 310, 1004, 1083
BmrFI	CCNGG	6 cut(s)	221, 376, 984, 1007, 1076, 1293
BmsI	GCATC	6 cut(s)	38, 565, 633, 899, 1023, 1351
BpiI	GAAGAC	1 cut(s)	95
BpmI	CTGGAG	1 cut(s)	1527
BpuEI	CTTGAG	1 cut(s)	335
BpuMI	CCSGG	1 cut(s)	376
BsaAI	YACGTR	1 cut(s)	1423
BsaHI	GRCGYC	1 cut(s)	432
BsaJI	CCNNGG	3 cut(s)	219, 919, 1074
BsaWI	WCCGGW	3 cut(s)	109, 1084, 1490
BsaXI	ACNNNNNCTCC	2 cut(s)	393, 423
Bsc4I	CCNNNNNNNGG	2 cut(s)	225, 925
BseBI	CCWGG	5 cut(s)	221, 984, 1007, 1076, 1293
BseDI	CCNNGG	3 cut(s)	219, 919, 1074
BseGI	GGATG	7 cut(s)	27, 53, 765, 858, 914, 1038, 1354
BseLI	CCNNNNNNNGG	2 cut(s)	225, 925
BseMII	CTCAG	4 cut(s)	507, 575, 1263, 1568
BseRI	GAGGAG	2 cut(s)	255, 309
BseSI	GKGCMC	1 cut(s)	1075
BseXI	GCAGC	5 cut(s)	120, 171, 177, 193, 1393
BseYI	CCCAGC	1 cut(s)	1028
BsgI	GTGCAG	2 cut(s)	510, 1445
Bsh1236I	CGCG	2 cut(s)	179, 1069
Bsh1285I	CGRYCG	1 cut(s)	1633
BshFI	GGCC	4 cut(s)	173, 356, 374, 1530
BshNI	GGYRCC	1 cut(s)	1002
BsiEI	CGRYCG	1 cut(s)	1633
BsiHKAI	GWGCWC	4 cut(s)	351, 613, 742, 965
BsiSI	CCGG	5 cut(s)	110, 162, 376, 1085, 1491
BslFI	GGGAC	2 cut(s)	1075, 1205
BslI	CCNNNNNNNGG	2 cut(s)	225, 925
BsmAI	GTCTC	3 cut(s)	157, 163, 516
BsmBI	CGTCTC	2 cut(s)	157, 163
BsmFI	GGGAC	2 cut(s)	1075, 1205
BsmI	GAATGC	1 cut(s)	700
BsnI	GGCC	4 cut(s)	173, 356, 374, 1530
Bsp1286I	GDGCHC	5 cut(s)	351, 613, 742, 965, 1075
Bsp143I	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
BspACI	CCGC	4 cut(s)	117, 467, 850, 1096
BspANI	GGCC	4 cut(s)	173, 356, 374, 1530
BspCNI	CTCAG	4 cut(s)	508, 574, 1264, 1569
BspFNI	CGCG	2 cut(s)	179, 1069
BspHI	TCATGA	1 cut(s)	1440
BspLI	GGNNCC	4 cut(s)	114, 310, 1004, 1083
BspMAI	CTGCAG	1 cut(s)	1589
BspPI	GGATC	8 cut(s)	27, 107, 120, 453, 1020, 1076, 1089, 1659
BspQI	GCTCTTC	1 cut(s)	194
BspT107I	GGYRCC	1 cut(s)	1002
BssECI	CCNNGG	3 cut(s)	219, 919, 1074
BssMI	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
BssNI	GRCGYC	1 cut(s)	432
BssT1I	CCWWGG	1 cut(s)	919
Bst2UI	CCWGG	5 cut(s)	221, 984, 1007, 1076, 1293
Bst4CI	ACNGT	1 cut(s)	101
Bst6I	CTCTTC	2 cut(s)	194, 384
BstACI	GRCGYC	1 cut(s)	432
BstBAI	YACGTR	1 cut(s)	1423
BstC8I	GCNNGC	4 cut(s)	296, 358, 1071, 1515
BstDEI	CTNAG	4 cut(s)	516, 561, 1272, 1577
BstF5I	GGATG	7 cut(s)	27, 53, 765, 858, 914, 1038, 1354
BstFNI	CGCG	2 cut(s)	179, 1069
BstH2I	RGCGCY	1 cut(s)	1049
BstHHI	GCGC	5 cut(s)	149, 181, 623, 700, 1048
BstKTI	GATC	9 cut(s)	35, 115, 461, 1015, 1084, 1266, 1321, 1633, 1654
BstMAI	GTCTC	3 cut(s)	157, 163, 516
BstMBI	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
BstMCI	CGRYCG	1 cut(s)	1633
BstMWI	GCNNNNNNNGC	1 cut(s)	1102
BstNI	CCWGG	5 cut(s)	221, 984, 1007, 1076, 1293
BstNSI	RCATGY	1 cut(s)	298
BstSCI	CCNGG	6 cut(s)	219, 374, 982, 1005, 1074, 1291
BstSFI	CTRYAG	2 cut(s)	1221, 1585
BstSLI	GKGCMC	1 cut(s)	1075
BstUI	CGCG	2 cut(s)	179, 1069
BstV1I	GCAGC	5 cut(s)	120, 171, 177, 193, 1393
BstV2I	GAAGAC	1 cut(s)	95
BstX2I	RGATCY	4 cut(s)	112, 458, 1012, 1081
BstYI	RGATCY	4 cut(s)	112, 458, 1012, 1081
BsuRI	GGCC	4 cut(s)	173, 356, 374, 1530
BtrI	CACGTC	1 cut(s)	88
BtsCI	GGATG	7 cut(s)	27, 53, 765, 858, 914, 1038, 1354
BtsIMutI	CAGTG	2 cut(s)	623, 979
Cac8I	GCNNGC	4 cut(s)	296, 358, 1071, 1515
CaiI	CAGNNNCTG	1 cut(s)	1451
CciI	TCATGA	1 cut(s)	1440
CfoI	GCGC	5 cut(s)	149, 181, 623, 700, 1048
Cfr13I	GGNCC	2 cut(s)	373, 1087
CseI	GACGC	2 cut(s)	736, 1437
Csp6I	GTAC	3 cut(s)	421, 812, 946
CviAII	CATG	9 cut(s)	295, 398, 793, 815, 1153, 1415, 1441, 1497, 1692
CviQI	GTAC	3 cut(s)	421, 812, 946
DdeI	CTNAG	4 cut(s)	516, 561, 1272, 1577
DpnI	GATC	9 cut(s)	34, 114, 460, 1014, 1083, 1265, 1320, 1632, 1653
DpnII	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
DrdI	GACNNNNNNGTC	1 cut(s)	938
DriI	GACNNNNNGTC	2 cut(s)	529, 1348
DseDI	GACNNNNNNGTC	1 cut(s)	938
Eam1104I	CTCTTC	2 cut(s)	194, 384
Eam1105I	GACNNNNNGTC	2 cut(s)	529, 1348
EarI	CTCTTC	2 cut(s)	194, 384
EciI	GGCGGA	2 cut(s)	865, 1111
Ecl136II	GAGCTC	1 cut(s)	963
Eco130I	CCWWGG	1 cut(s)	919
Eco147I	AGGCCT	1 cut(s)	356
Eco24I	GRGCYC	1 cut(s)	965
Eco47I	GGWCC	1 cut(s)	1087
Eco53kI	GAGCTC	1 cut(s)	963
EcoICRI	GAGCTC	1 cut(s)	963
EcoRI	GAATTC	2 cut(s)	229, 538
EcoRII	CCWGG	5 cut(s)	219, 982, 1005, 1074, 1291
EcoT14I	CCWWGG	1 cut(s)	919
EcoT22I	ATGCAT	1 cut(s)	648
EcoT38I	GRGCYC	1 cut(s)	965
ErhI	CCWWGG	1 cut(s)	919
Esp3I	CGTCTC	2 cut(s)	157, 163
FaeI	CATG	9 cut(s)	298, 401, 796, 818, 1156, 1418, 1444, 1500, 1695
FaqI	GGGAC	2 cut(s)	1075, 1205
FatI	CATG	9 cut(s)	294, 397, 792, 814, 1152, 1414, 1440, 1496, 1691
FauI	CCCGC	2 cut(s)	124, 460
FbaI	TGATCA	2 cut(s)	1263, 1318
Fnu4HI	GCNGC	5 cut(s)	134, 166, 182, 185, 1407
FokI	GGATG	7 cut(s)	14, 60, 772, 865, 921, 1045, 1341
FriOI	GRGCYC	1 cut(s)	965
Fsp4HI	GCNGC	5 cut(s)	134, 166, 182, 185, 1407
FspBI	CTAG	3 cut(s)	657, 1172, 1532
GlaI	GCGC	5 cut(s)	148, 180, 622, 699, 1047
GluI	GCNGC	5 cut(s)	134, 166, 182, 185, 1407
GsaI	CCCAGC	1 cut(s)	1032
GsuI	CTGGAG	1 cut(s)	1527
HaeII	RGCGCY	1 cut(s)	1049
HaeIII	GGCC	4 cut(s)	173, 356, 374, 1530
HapII	CCGG	5 cut(s)	110, 162, 376, 1085, 1491
HgaI	GACGC	2 cut(s)	736, 1437
HhaI	GCGC	5 cut(s)	149, 181, 623, 700, 1048
Hin1I	GRCGYC	1 cut(s)	432
Hin1II	CATG	9 cut(s)	298, 401, 796, 818, 1156, 1418, 1444, 1500, 1695
Hin6I	GCGC	5 cut(s)	147, 179, 621, 698, 1046
HinP1I	GCGC	5 cut(s)	147, 179, 621, 698, 1046
HincII	GTYRAC	1 cut(s)	931
HindII	GTYRAC	1 cut(s)	931
HindIII	AAGCTT	1 cut(s)	1623
HinfI	GANTC	6 cut(s)	867, 1099, 1120, 1159, 1433, 1581
HpaII	CCGG	5 cut(s)	110, 162, 376, 1085, 1491
HphI	GGTGA	7 cut(s)	85, 191, 260, 421, 830, 908, 1328
Hpy166II	GTNNAC	5 cut(s)	582, 931, 1327, 1342, 1605
Hpy188I	TCNGA	7 cut(s)	32, 242, 517, 564, 635, 642, 1453
Hpy188III	TCNNGA	6 cut(s)	323, 572, 1358, 1441, 1544, 1634
Hpy8I	GTNNAC	5 cut(s)	582, 931, 1327, 1342, 1605
Hpy99I	CGWCG	1 cut(s)	437
HpyAV	CCTTC	7 cut(s)	270, 352, 364, 490, 559, 857, 1541
HpyCH4III	ACNGT	1 cut(s)	101
HpyCH4IV	ACGT	3 cut(s)	87, 432, 1422
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1102
HpyF3I	CTNAG	4 cut(s)	516, 561, 1272, 1577
HpySE526I	ACGT	3 cut(s)	87, 432, 1422
Hsp92I	GRCGYC	1 cut(s)	432
Hsp92II	CATG	9 cut(s)	298, 401, 796, 818, 1156, 1418, 1444, 1500, 1695
HspAI	GCGC	5 cut(s)	147, 179, 621, 698, 1046
Ksp22I	TGATCA	2 cut(s)	1263, 1318
Kzo9I	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
LguI	GCTCTTC	1 cut(s)	194
LmnI	GCTCC	3 cut(s)	401, 968, 1299
Lsp1109I	GCAGC	5 cut(s)	120, 171, 177, 193, 1393
LweI	GCATC	6 cut(s)	38, 565, 633, 899, 1023, 1351
MaeI	CTAG	3 cut(s)	657, 1172, 1532
MaeII	ACGT	3 cut(s)	87, 432, 1422
MaeIII	GTNAC	5 cut(s)	725, 914, 1350, 1418, 1499
MalI	GATC	9 cut(s)	34, 114, 460, 1014, 1083, 1265, 1320, 1632, 1653
MboI	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
MboII	GAAGA	6 cut(s)	95, 181, 391, 401, 778, 839
MfeI	CAATTG	1 cut(s)	1518
MflI	RGATCY	4 cut(s)	112, 458, 1012, 1081
MhlI	GDGCHC	5 cut(s)	351, 613, 742, 965, 1075
MlyI	GAGTC	3 cut(s)	876, 1093, 1590
MmeI	TCCRAC	2 cut(s)	276, 1277
Mph1103I	ATGCAT	1 cut(s)	648
MroXI	GAANNNNTTC	1 cut(s)	393
MseI	TTAA	1 cut(s)	990
MslI	CAYNNNNRTG	3 cut(s)	819, 1128, 1359
MspA1I	CMGCKG	1 cut(s)	184
MspI	CCGG	5 cut(s)	110, 162, 376, 1085, 1491
MspR9I	CCNGG	6 cut(s)	221, 376, 984, 1007, 1076, 1293
MunI	CAATTG	1 cut(s)	1518
Mva1269I	GAATGC	1 cut(s)	700
MvaI	CCWGG	5 cut(s)	221, 984, 1007, 1076, 1293
MvnI	CGCG	2 cut(s)	179, 1069
MwoI	GCNNNNNNNGC	1 cut(s)	1102
NciI	CCSGG	1 cut(s)	376
NdeII	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
NlaIII	CATG	9 cut(s)	298, 401, 796, 818, 1156, 1418, 1444, 1500, 1695
NlaIV	GGNNCC	4 cut(s)	114, 310, 1004, 1083
NmuCI	GTSAC	3 cut(s)	914, 1350, 1499
NsiI	ATGCAT	1 cut(s)	648
NspI	RCATGY	1 cut(s)	298
PaeI	GCATGC	1 cut(s)	298
PagI	TCATGA	1 cut(s)	1440
PceI	AGGCCT	1 cut(s)	356
PciSI	GCTCTTC	1 cut(s)	194
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PctI	GAATGC	1 cut(s)	700
PdmI	GAANNNNTTC	1 cut(s)	393
PfeI	GAWTC	3 cut(s)	1120, 1159, 1433
PflFI	GACNNNGTC	1 cut(s)	1447
PflMI	CCANNNNNTGG	1 cut(s)	925
PkrI	GCNGC	5 cut(s)	135, 167, 183, 186, 1408
Ple19I	CGATCG	1 cut(s)	1633
PleI	GAGTC	3 cut(s)	875, 1093, 1589
PpsI	GAGTC	3 cut(s)	875, 1093, 1589
Ppu21I	YACGTR	1 cut(s)	1423
Psp124BI	GAGCTC	1 cut(s)	965
Psp6I	CCWGG	5 cut(s)	219, 982, 1005, 1074, 1291
PspFI	CCCAGC	1 cut(s)	1028
PspGI	CCWGG	5 cut(s)	219, 982, 1005, 1074, 1291
PspN4I	GGNNCC	4 cut(s)	114, 310, 1004, 1083
PspPI	GGNCC	2 cut(s)	373, 1087
PstI	CTGCAG	1 cut(s)	1589
PstNI	CAGNNNCTG	1 cut(s)	1451
PsuI	RGATCY	4 cut(s)	112, 458, 1012, 1081
PsyI	GACNNNGTC	1 cut(s)	1447
PvuI	CGATCG	1 cut(s)	1633
PvuII	CAGCTG	1 cut(s)	184
RsaI	GTAC	3 cut(s)	422, 813, 947
RsaNI	GTAC	3 cut(s)	421, 812, 946
RseI	CAYNNNNRTG	3 cut(s)	819, 1128, 1359
SacI	GAGCTC	1 cut(s)	965
SapI	GCTCTTC	1 cut(s)	194
SaqAI	TTAA	1 cut(s)	990
SatI	GCNGC	5 cut(s)	134, 166, 182, 185, 1407
Sau3AI	GATC	9 cut(s)	32, 112, 458, 1012, 1081, 1263, 1318, 1630, 1651
Sau96I	GGNCC	2 cut(s)	373, 1087
ScaI	AGTACT	1 cut(s)	947
SchI	GAGTC	3 cut(s)	876, 1093, 1590
ScrFI	CCNGG	6 cut(s)	221, 376, 984, 1007, 1076, 1293
SduI	GDGCHC	5 cut(s)	351, 613, 742, 965, 1075
SfaNI	GCATC	6 cut(s)	38, 565, 633, 899, 1023, 1351
SfcI	CTRYAG	2 cut(s)	1221, 1585
SinI	GGWCC	1 cut(s)	1087
SmiMI	CAYNNNNRTG	3 cut(s)	819, 1128, 1359
SmlI	CTYRAG	1 cut(s)	350
SmoI	CTYRAG	1 cut(s)	350
SphI	GCATGC	1 cut(s)	298
SseBI	AGGCCT	1 cut(s)	356
SsiI	CCGC	4 cut(s)	117, 467, 850, 1096
SspMI	CTAG	3 cut(s)	657, 1172, 1532
SstI	GAGCTC	1 cut(s)	965
StuI	AGGCCT	1 cut(s)	356
StyD4I	CCNGG	6 cut(s)	219, 374, 982, 1005, 1074, 1291
StyI	CCWWGG	1 cut(s)	919
TaaI	ACNGT	1 cut(s)	101
TaiI	ACGT	3 cut(s)	90, 435, 1425
TaqI	TCGA	6 cut(s)	861, 942, 1038, 1211, 1402, 1629
TatI	WGTACW	2 cut(s)	811, 945
TfiI	GAWTC	3 cut(s)	1120, 1159, 1433
Tru1I	TTAA	1 cut(s)	990
Tru9I	TTAA	1 cut(s)	990
TscAI	CASTG	2 cut(s)	630, 979
TseFI	GTSAC	3 cut(s)	914, 1350, 1499
TseI	GCWGC	5 cut(s)	133, 165, 181, 184, 1406
Tsp45I	GTSAC	3 cut(s)	914, 1350, 1499
TspDTI	ATGAA	8 cut(s)	386, 591, 1112, 1383, 1388, 1485, 1655, 1680
TspGWI	ACGGA	1 cut(s)	145
TspRI	CASTG	2 cut(s)	630, 979
Tth111I	GACNNNGTC	1 cut(s)	1447
Van91I	CCANNNNNTGG	1 cut(s)	925
VpaK11BI	GGWCC	1 cut(s)	1087
XapI	RAATTY	5 cut(s)	9, 229, 538, 1331, 1371
XceI	RCATGY	1 cut(s)	298
XmnI	GAANNNNTTC	1 cut(s)	393
XspI	CTAG	3 cut(s)	657, 1172, 1532
ZraI	GACGTC	1 cut(s)	433
ZrmI	AGTACT	1 cut(s)	947
Zsp2I	ATGCAT	1 cut(s)	648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.